BLASTX nr result
ID: Atropa21_contig00039636
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00039636
(510 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004231072.1| PREDICTED: F-box protein SKIP23-like [Solanu... 139 5e-31
ref|XP_006364536.1| PREDICTED: F-box protein SKIP23-like [Solanu... 129 3e-28
gb|EMJ02990.1| hypothetical protein PRUPE_ppa006538mg [Prunus pe... 82 1e-13
ref|XP_002313690.1| hypothetical protein POPTR_0009s14200g [Popu... 74 2e-11
ref|XP_004290033.1| PREDICTED: F-box protein SKIP23-like [Fragar... 74 2e-11
ref|XP_002278342.1| PREDICTED: F-box protein SKIP23 [Vitis vinif... 73 4e-11
gb|EOX97548.1| F-box family protein, putative isoform 3 [Theobro... 71 1e-10
gb|EOX97547.1| F-box family protein, putative isoform 2 [Theobro... 71 1e-10
gb|EOX97546.1| F-box family protein, putative isoform 1 [Theobro... 71 1e-10
ref|XP_002528428.1| conserved hypothetical protein [Ricinus comm... 70 4e-10
gb|EXB95361.1| F-box protein SKIP23 [Morus notabilis] 69 6e-10
ref|XP_002305539.2| hypothetical protein POPTR_0004s18630g [Popu... 69 6e-10
ref|XP_004154592.1| PREDICTED: F-box protein SKIP23-like [Cucumi... 66 5e-09
ref|XP_004140043.1| PREDICTED: F-box protein SKIP23-like [Cucumi... 66 5e-09
ref|XP_002278304.1| PREDICTED: F-box protein SKIP23-like [Vitis ... 66 5e-09
ref|XP_006422483.1| hypothetical protein CICLE_v10028612mg [Citr... 62 1e-07
ref|XP_006486651.1| PREDICTED: F-box protein SKIP23-like isoform... 60 4e-07
ref|XP_006486650.1| PREDICTED: F-box protein SKIP23-like isoform... 60 4e-07
ref|XP_002279526.2| PREDICTED: LOW QUALITY PROTEIN: F-box protei... 60 4e-07
ref|XP_003599229.1| F-box protein [Medicago truncatula] gi|35548... 59 5e-07
>ref|XP_004231072.1| PREDICTED: F-box protein SKIP23-like [Solanum lycopersicum]
Length = 406
Score = 139 bits (349), Expect = 5e-31
Identities = 67/97 (69%), Positives = 76/97 (78%)
Frame = -3
Query: 502 LEDRILFVGENCTFSTLVSEFDSRCKGNCILFADQYFCCTEDDGGFWKNDGIGVFSLENG 323
LEDR+LFVG+NCTFS LVSE DS CKGNCILF+D +FC TEDDGGFWK+ GIGVFSLENG
Sbjct: 310 LEDRMLFVGDNCTFSALVSELDSGCKGNCILFSDLFFCSTEDDGGFWKHHGIGVFSLENG 369
Query: 322 NIGPVSSFQGYAELFXXXXXXXXXXXXIDAELNELKI 212
+I P++ +GYAELF IDAELNELKI
Sbjct: 370 SICPINCCRGYAELFWPPPPWICSPPTIDAELNELKI 406
>ref|XP_006364536.1| PREDICTED: F-box protein SKIP23-like [Solanum tuberosum]
Length = 456
Score = 129 bits (325), Expect = 3e-28
Identities = 58/75 (77%), Positives = 66/75 (88%)
Frame = -3
Query: 502 LEDRILFVGENCTFSTLVSEFDSRCKGNCILFADQYFCCTEDDGGFWKNDGIGVFSLENG 323
LEDR+LFVG+NCTFS LVSE DS CKGNCILF+DQ+FC TEDDGGFWK+ GIGVFSLENG
Sbjct: 313 LEDRMLFVGDNCTFSALVSELDSGCKGNCILFSDQFFCSTEDDGGFWKHHGIGVFSLENG 372
Query: 322 NIGPVSSFQGYAELF 278
I P++ +GYAELF
Sbjct: 373 RICPINCCRGYAELF 387
>gb|EMJ02990.1| hypothetical protein PRUPE_ppa006538mg [Prunus persica]
Length = 406
Score = 81.6 bits (200), Expect = 1e-13
Identities = 38/76 (50%), Positives = 53/76 (69%)
Frame = -3
Query: 505 SLEDRILFVGENCTFSTLVSEFDSRCKGNCILFADQYFCCTEDDGGFWKNDGIGVFSLEN 326
SL DR+LF+G++CTFS SE S CKGNCI F D +F + +D G +K IGVF L++
Sbjct: 311 SLGDRVLFLGDDCTFSASASEL-SGCKGNCIFFTDNFFYTSGEDEGVFKGRDIGVFDLDD 369
Query: 325 GNIGPVSSFQGYAELF 278
G+I P+S + Y++LF
Sbjct: 370 GSIAPLSDYPEYSKLF 385
>ref|XP_002313690.1| hypothetical protein POPTR_0009s14200g [Populus trichocarpa]
gi|222850098|gb|EEE87645.1| hypothetical protein
POPTR_0009s14200g [Populus trichocarpa]
Length = 410
Score = 74.3 bits (181), Expect = 2e-11
Identities = 40/78 (51%), Positives = 52/78 (66%), Gaps = 2/78 (2%)
Frame = -3
Query: 505 SLEDRILFVGENCTFSTLVSEFDSRCKGNCILFADQYFCCTE--DDGGFWKNDGIGVFSL 332
+LEDR+LF+G++ TFS SE S CKGNCI F D +F E DDG D IGVF L
Sbjct: 308 NLEDRVLFLGDDSTFSASASEL-SGCKGNCIFFEDNFFYSREEGDDGSMIGRD-IGVFEL 365
Query: 331 ENGNIGPVSSFQGYAELF 278
E+G IGP+ +F Y+++F
Sbjct: 366 ESGCIGPLRNFPDYSKMF 383
>ref|XP_004290033.1| PREDICTED: F-box protein SKIP23-like [Fragaria vesca subsp. vesca]
Length = 397
Score = 73.9 bits (180), Expect = 2e-11
Identities = 36/76 (47%), Positives = 50/76 (65%)
Frame = -3
Query: 505 SLEDRILFVGENCTFSTLVSEFDSRCKGNCILFADQYFCCTEDDGGFWKNDGIGVFSLEN 326
SL DR+LF+G++CTFS SE + CKGNCI F D +F + ++ G +K IGVF L+
Sbjct: 300 SLGDRVLFLGDDCTFSASASEL-AGCKGNCIFFMDNFFYTSGEEEGTYKGRDIGVFDLDR 358
Query: 325 GNIGPVSSFQGYAELF 278
G I P+S + A+LF
Sbjct: 359 GAITPLSDYPEAAKLF 374
>ref|XP_002278342.1| PREDICTED: F-box protein SKIP23 [Vitis vinifera]
Length = 375
Score = 72.8 bits (177), Expect = 4e-11
Identities = 35/75 (46%), Positives = 52/75 (69%)
Frame = -3
Query: 505 SLEDRILFVGENCTFSTLVSEFDSRCKGNCILFADQYFCCTEDDGGFWKNDGIGVFSLEN 326
+L DRILF+GE TFS + SEF C+GNCI + + +F + + + GIG+F+LEN
Sbjct: 288 NLGDRILFLGEKSTFSAVASEFCG-CEGNCIYYTNSFFFPNDQEDDAYT--GIGIFNLEN 344
Query: 325 GNIGPVSSFQGYAEL 281
GN+GP+SSF Y+++
Sbjct: 345 GNLGPLSSFPNYSKV 359
>gb|EOX97548.1| F-box family protein, putative isoform 3 [Theobroma cacao]
Length = 407
Score = 71.2 bits (173), Expect = 1e-10
Identities = 33/76 (43%), Positives = 51/76 (67%)
Frame = -3
Query: 505 SLEDRILFVGENCTFSTLVSEFDSRCKGNCILFADQYFCCTEDDGGFWKNDGIGVFSLEN 326
+L+DR+LF+G++ TFS + S C+GNCI+FAD +F + G + +GVF LEN
Sbjct: 315 NLDDRVLFLGDDFTFSASAKDL-SVCRGNCIIFADNFFYSLGAEDGQSERCDVGVFDLEN 373
Query: 325 GNIGPVSSFQGYAELF 278
G+IGP+ F +++LF
Sbjct: 374 GSIGPLGKFPQFSKLF 389
>gb|EOX97547.1| F-box family protein, putative isoform 2 [Theobroma cacao]
Length = 406
Score = 71.2 bits (173), Expect = 1e-10
Identities = 33/76 (43%), Positives = 51/76 (67%)
Frame = -3
Query: 505 SLEDRILFVGENCTFSTLVSEFDSRCKGNCILFADQYFCCTEDDGGFWKNDGIGVFSLEN 326
+L+DR+LF+G++ TFS + S C+GNCI+FAD +F + G + +GVF LEN
Sbjct: 315 NLDDRVLFLGDDFTFSASAKDL-SVCRGNCIIFADNFFYSLGAEDGQSERCDVGVFDLEN 373
Query: 325 GNIGPVSSFQGYAELF 278
G+IGP+ F +++LF
Sbjct: 374 GSIGPLGKFPQFSKLF 389
>gb|EOX97546.1| F-box family protein, putative isoform 1 [Theobroma cacao]
Length = 411
Score = 71.2 bits (173), Expect = 1e-10
Identities = 33/76 (43%), Positives = 51/76 (67%)
Frame = -3
Query: 505 SLEDRILFVGENCTFSTLVSEFDSRCKGNCILFADQYFCCTEDDGGFWKNDGIGVFSLEN 326
+L+DR+LF+G++ TFS + S C+GNCI+FAD +F + G + +GVF LEN
Sbjct: 315 NLDDRVLFLGDDFTFSASAKDL-SVCRGNCIIFADNFFYSLGAEDGQSERCDVGVFDLEN 373
Query: 325 GNIGPVSSFQGYAELF 278
G+IGP+ F +++LF
Sbjct: 374 GSIGPLGKFPQFSKLF 389
>ref|XP_002528428.1| conserved hypothetical protein [Ricinus communis]
gi|223532164|gb|EEF33970.1| conserved hypothetical
protein [Ricinus communis]
Length = 339
Score = 69.7 bits (169), Expect = 4e-10
Identities = 37/83 (44%), Positives = 50/83 (60%), Gaps = 7/83 (8%)
Frame = -3
Query: 505 SLEDRILFVGENCTFSTLVSEFDSRCKGNCILFADQYFCCTED-------DGGFWKNDGI 347
SL DR+LF+G++ TFS VS+ S CKGNCI F D +F ++ D G I
Sbjct: 247 SLGDRVLFLGDDSTFSASVSDL-SGCKGNCIFFVDNFFYSRDENLRANGGDDGVLAGRDI 305
Query: 346 GVFSLENGNIGPVSSFQGYAELF 278
GVF LE G IGP+ ++ YA++F
Sbjct: 306 GVFDLETGCIGPLGNYPEYAKMF 328
>gb|EXB95361.1| F-box protein SKIP23 [Morus notabilis]
Length = 417
Score = 68.9 bits (167), Expect = 6e-10
Identities = 32/76 (42%), Positives = 49/76 (64%)
Frame = -3
Query: 505 SLEDRILFVGENCTFSTLVSEFDSRCKGNCILFADQYFCCTEDDGGFWKNDGIGVFSLEN 326
SL+DR+LF+G++CTFS S D C NCI F D +F ++ G +K IGV+ +EN
Sbjct: 310 SLDDRMLFLGDDCTFSASAS--DLSCCRNCIFFTDNFFYSGGEEDGVFKGRDIGVYDMEN 367
Query: 325 GNIGPVSSFQGYAELF 278
G+I ++ + Y++LF
Sbjct: 368 GSIAALTDYPEYSKLF 383
>ref|XP_002305539.2| hypothetical protein POPTR_0004s18630g [Populus trichocarpa]
gi|566167272|ref|XP_006384594.1| hypothetical protein
POPTR_0004s18630g [Populus trichocarpa]
gi|550341338|gb|EEE86050.2| hypothetical protein
POPTR_0004s18630g [Populus trichocarpa]
gi|550341339|gb|ERP62391.1| hypothetical protein
POPTR_0004s18630g [Populus trichocarpa]
Length = 410
Score = 68.9 bits (167), Expect = 6e-10
Identities = 38/77 (49%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Frame = -3
Query: 502 LEDRILFVGENCTFSTLVSEFDSRCKGNCILFADQYFCCTE--DDGGFWKNDGIGVFSLE 329
LEDR+LF+G++ TFS SE S CKGNCI F D +F DDG + D IGVF LE
Sbjct: 309 LEDRVLFLGDDLTFSASASEL-SGCKGNCIFFNDDFFYSRGEGDDGSLFGRD-IGVFELE 366
Query: 328 NGNIGPVSSFQGYAELF 278
+G IGP+ +F +++F
Sbjct: 367 SGCIGPLRNFPDNSKMF 383
>ref|XP_004154592.1| PREDICTED: F-box protein SKIP23-like [Cucumis sativus]
Length = 458
Score = 65.9 bits (159), Expect = 5e-09
Identities = 33/75 (44%), Positives = 43/75 (57%)
Frame = -3
Query: 502 LEDRILFVGENCTFSTLVSEFDSRCKGNCILFADQYFCCTEDDGGFWKNDGIGVFSLENG 323
L + +LF+GENC+FS S S CKGNCI F D + C D+ +K I +F LE G
Sbjct: 303 LGNTMLFLGENCSFSASASGV-SGCKGNCIFFTDGFLCPNVDEDDVFKGSDIAIFDLEFG 361
Query: 322 NIGPVSSFQGYAELF 278
I P+S Y+ LF
Sbjct: 362 TISPLSDSPMYSRLF 376
>ref|XP_004140043.1| PREDICTED: F-box protein SKIP23-like [Cucumis sativus]
Length = 404
Score = 65.9 bits (159), Expect = 5e-09
Identities = 33/75 (44%), Positives = 43/75 (57%)
Frame = -3
Query: 502 LEDRILFVGENCTFSTLVSEFDSRCKGNCILFADQYFCCTEDDGGFWKNDGIGVFSLENG 323
L + +LF+GENC+FS S S CKGNCI F D + C D+ +K I +F LE G
Sbjct: 303 LGNTMLFLGENCSFSASASGV-SGCKGNCIFFTDGFLCPNVDEDDVFKGSDIAIFDLEFG 361
Query: 322 NIGPVSSFQGYAELF 278
I P+S Y+ LF
Sbjct: 362 TISPLSDSPMYSRLF 376
>ref|XP_002278304.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
Length = 394
Score = 65.9 bits (159), Expect = 5e-09
Identities = 34/76 (44%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Frame = -3
Query: 505 SLEDRILFVGENCTFSTLVSEFDSRCKGNCILFADQYFCCT-EDDGGFWKNDGIGVFSLE 329
SL +RILF+GE TFS + SEF C+GNCI + + +FC + D + I +F+LE
Sbjct: 289 SLGNRILFLGEKSTFSAVASEFCG-CEGNCIYYTNTFFCPNGQGDNAY---TAIDIFNLE 344
Query: 328 NGNIGPVSSFQGYAEL 281
NGN+GP+ SF Y+++
Sbjct: 345 NGNMGPLLSFPDYSKV 360
>ref|XP_006422483.1| hypothetical protein CICLE_v10028612mg [Citrus clementina]
gi|557524417|gb|ESR35723.1| hypothetical protein
CICLE_v10028612mg [Citrus clementina]
Length = 394
Score = 61.6 bits (148), Expect = 1e-07
Identities = 31/76 (40%), Positives = 45/76 (59%)
Frame = -3
Query: 505 SLEDRILFVGENCTFSTLVSEFDSRCKGNCILFADQYFCCTEDDGGFWKNDGIGVFSLEN 326
+L D +LF+GE+C FST + KGNCILF D F + + G G+GVF LE+
Sbjct: 306 NLRDHVLFLGEDCVFSTSADDLGVS-KGNCILFVDNLFYLSGEGDGSDCGHGVGVFDLES 364
Query: 325 GNIGPVSSFQGYAELF 278
G I P+ ++ ++LF
Sbjct: 365 GCIKPLENYPELSKLF 380
>ref|XP_006486651.1| PREDICTED: F-box protein SKIP23-like isoform X2 [Citrus sinensis]
Length = 394
Score = 59.7 bits (143), Expect = 4e-07
Identities = 31/76 (40%), Positives = 44/76 (57%)
Frame = -3
Query: 505 SLEDRILFVGENCTFSTLVSEFDSRCKGNCILFADQYFCCTEDDGGFWKNDGIGVFSLEN 326
+L D +LF+GE+C FST + KGNCILF D F + + G G+GVF LE+
Sbjct: 306 NLRDHVLFLGEDCVFSTSADDLGVS-KGNCILFVDNLFYLSGEGDGSDCGHGVGVFDLES 364
Query: 325 GNIGPVSSFQGYAELF 278
G I P+ + ++LF
Sbjct: 365 GCIKPLENCPELSKLF 380
>ref|XP_006486650.1| PREDICTED: F-box protein SKIP23-like isoform X1 [Citrus sinensis]
Length = 416
Score = 59.7 bits (143), Expect = 4e-07
Identities = 31/76 (40%), Positives = 44/76 (57%)
Frame = -3
Query: 505 SLEDRILFVGENCTFSTLVSEFDSRCKGNCILFADQYFCCTEDDGGFWKNDGIGVFSLEN 326
+L D +LF+GE+C FST + KGNCILF D F + + G G+GVF LE+
Sbjct: 306 NLRDHVLFLGEDCVFSTSADDLGVS-KGNCILFVDNLFYLSGEGDGSDCGHGVGVFDLES 364
Query: 325 GNIGPVSSFQGYAELF 278
G I P+ + ++LF
Sbjct: 365 GCIKPLENCPELSKLF 380
>ref|XP_002279526.2| PREDICTED: LOW QUALITY PROTEIN: F-box protein SKIP23-like [Vitis
vinifera]
Length = 387
Score = 59.7 bits (143), Expect = 4e-07
Identities = 30/74 (40%), Positives = 48/74 (64%)
Frame = -3
Query: 505 SLEDRILFVGENCTFSTLVSEFDSRCKGNCILFADQYFCCTEDDGGFWKNDGIGVFSLEN 326
SL DR+LF+G++ +FS S+F CKGN I F + F ++ ++ IGVF L++
Sbjct: 299 SLGDRLLFLGDDSSFSARASDFYG-CKGNSICFTNISFFSDAEEDDASRSGTIGVFDLDS 357
Query: 325 GNIGPVSSFQGYAE 284
G+IGP+SS+ Y++
Sbjct: 358 GSIGPLSSYANYSK 371
>ref|XP_003599229.1| F-box protein [Medicago truncatula] gi|355488277|gb|AES69480.1|
F-box protein [Medicago truncatula]
Length = 392
Score = 59.3 bits (142), Expect = 5e-07
Identities = 30/76 (39%), Positives = 42/76 (55%)
Frame = -3
Query: 505 SLEDRILFVGENCTFSTLVSEFDSRCKGNCILFADQYFCCTEDDGGFWKNDGIGVFSLEN 326
+L DR+LF+GE C+FS S+ KGNCI+F D + +W G GV+ L+
Sbjct: 315 NLGDRVLFLGEGCSFSASASDL-CVSKGNCIVFID------DSVSAYWMQGGNGVYHLDQ 367
Query: 325 GNIGPVSSFQGYAELF 278
G + PVS + Y LF
Sbjct: 368 GRVSPVSRYHEYFNLF 383