BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00039534
         (1279 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006345709.1| PREDICTED: putative ribonuclease H protein A...    71   5e-10
ref|XP_006345710.1| PREDICTED: putative ribonuclease H protein A...    69   2e-09
ref|XP_006353602.1| PREDICTED: putative ribonuclease H protein A...    68   5e-09
ref|XP_006355601.1| PREDICTED: putative ribonuclease H protein A...    66   3e-08
ref|XP_006352964.1| PREDICTED: putative ribonuclease H protein A...    66   3e-08
ref|XP_006362709.1| PREDICTED: putative ribonuclease H protein A...    64   1e-07
ref|XP_006347119.1| PREDICTED: putative ribonuclease H protein A...    64   1e-07
ref|XP_006337991.1| PREDICTED: putative ribonuclease H protein A...    64   1e-07
ref|XP_006354966.1| PREDICTED: putative ribonuclease H protein A...    61   9e-07

>ref|XP_006345709.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform X1
            [Solanum tuberosum]
          Length = 284

 Score = 70.9 bits (172), Expect(2) = 5e-10
 Identities = 28/52 (53%), Positives = 40/52 (76%)
 Frame = +3

Query: 993  KLVSRWRKSIPACIWWIVWKERNARCFEDNSSSIQKIKMNCIVFVVLL*RKI 1148
            K   RW + IP+CIWW VWKERN+RCF++ S+SI K+K NCIV ++ L +++
Sbjct: 218  KSQKRWWRLIPSCIWWSVWKERNSRCFDNRSNSIHKVKWNCIVSLLFLCKQL 269



 Score = 21.2 bits (43), Expect(2) = 5e-10
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 1120 SL*FCCKGKYIEDTESLLDFL 1182
            SL F CK   I DT+ ++D +
Sbjct: 261  SLLFLCKQLCIVDTDQIVDLI 281


>ref|XP_006345710.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform X2
            [Solanum tuberosum]
          Length = 284

 Score = 68.9 bits (167), Expect(2) = 2e-09
 Identities = 27/43 (62%), Positives = 34/43 (79%)
 Frame = +3

Query: 993  KLVSRWRKSIPACIWWIVWKERNARCFEDNSSSIQKIKMNCIV 1121
            K   RW + IP+CIWW VWKERN+RCF++ S+SI K+K NCIV
Sbjct: 218  KSQKRWWRLIPSCIWWSVWKERNSRCFDNRSNSIHKVKWNCIV 260



 Score = 20.8 bits (42), Expect(2) = 2e-09
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 1120 SL*FCCKGKYIEDTESLLDFL 1182
            SL F CK   I DT+ ++D +
Sbjct: 261  SLLFWCKQLCIVDTDQIVDLI 281


>ref|XP_006353602.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            tuberosum]
          Length = 517

 Score = 67.8 bits (164), Expect(2) = 5e-09
 Identities = 27/43 (62%), Positives = 33/43 (76%)
 Frame = +3

Query: 993  KLVSRWRKSIPACIWWIVWKERNARCFEDNSSSIQKIKMNCIV 1121
            K   RW + IP+CIWW VWKERN RCF++ S+SI K+K NCIV
Sbjct: 451  KSQKRWWRLIPSCIWWSVWKERNNRCFDNRSNSIHKVKWNCIV 493



 Score = 20.8 bits (42), Expect(2) = 5e-09
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 1120 SL*FCCKGKYIEDTESLLDFL 1182
            SL F CK   I DT+ ++D +
Sbjct: 494  SLLFWCKQLCIVDTDQIVDLI 514


>ref|XP_006355601.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            tuberosum]
          Length = 399

 Score = 66.2 bits (160), Expect = 3e-08
 Identities = 29/54 (53%), Positives = 38/54 (70%)
 Frame = +3

Query: 966  SWETQIINIKLVSRWRKSIPACIWWIVWKERNARCFEDNSSSIQKIKMNCIVFV 1127
            SWE   +  K  +RWR  IPA IWW  WKERN+RCFE   +S+QK+K+NCI+ +
Sbjct: 325  SWEEAGVLAKDRTRWR-IIPASIWWATWKERNSRCFESVENSMQKVKLNCILLL 377


>ref|XP_006352964.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            tuberosum]
          Length = 323

 Score = 66.2 bits (160), Expect = 3e-08
 Identities = 29/54 (53%), Positives = 38/54 (70%)
 Frame = +3

Query: 966  SWETQIINIKLVSRWRKSIPACIWWIVWKERNARCFEDNSSSIQKIKMNCIVFV 1127
            SWE   +  K  +RWR  IPA IWW  WKERN+RCFE   +S+QK+K+NCI+ +
Sbjct: 249  SWEEAGVLAKDRTRWR-IIPASIWWATWKERNSRCFESVENSMQKVKLNCILLL 301


>ref|XP_006362709.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            tuberosum]
          Length = 217

 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 25/38 (65%), Positives = 30/38 (78%)
 Frame = +3

Query: 1005 RWRKSIPACIWWIVWKERNARCFEDNSSSIQKIKMNCI 1118
            RWR  +PACIWW +WKERN RCFE   ++IQKIK NC+
Sbjct: 156  RWR-IVPACIWWTIWKERNQRCFEGKQNNIQKIKTNCL 192


>ref|XP_006347119.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            tuberosum]
          Length = 450

 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 28/54 (51%), Positives = 37/54 (68%)
 Frame = +3

Query: 966  SWETQIINIKLVSRWRKSIPACIWWIVWKERNARCFEDNSSSIQKIKMNCIVFV 1127
            SWE      K  +RWR  IPA IWW +WKERN+RCFE   +S+Q +K+NCI+ +
Sbjct: 376  SWEEAGALAKDRTRWR-IIPASIWWAIWKERNSRCFEGIENSVQDVKLNCILLL 428


>ref|XP_006337991.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            tuberosum]
          Length = 556

 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 28/54 (51%), Positives = 37/54 (68%)
 Frame = +3

Query: 966  SWETQIINIKLVSRWRKSIPACIWWIVWKERNARCFEDNSSSIQKIKMNCIVFV 1127
            SWE      K  +RWR  IPA IWW +WKERN+RCFE   +S+Q +K+NCI+ +
Sbjct: 482  SWEEAGALAKDRTRWR-IIPASIWWAIWKERNSRCFEGIENSVQDVKLNCILLL 534


>ref|XP_006354966.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            tuberosum]
          Length = 397

 Score = 61.2 bits (147), Expect = 9e-07
 Identities = 27/52 (51%), Positives = 35/52 (67%)
 Frame = +3

Query: 966  SWETQIINIKLVSRWRKSIPACIWWIVWKERNARCFEDNSSSIQKIKMNCIV 1121
            SW  +       SRW K +PA IWW +WKERN+R F++ SS + KIKMNCI+
Sbjct: 323  SWNMEGSGSTDKSRW-KIVPAVIWWTIWKERNSRNFDNKSSPLHKIKMNCII 373