BLASTX nr result

ID: Atropa21_contig00039530 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00039530
         (624 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006365207.1| PREDICTED: methyl-CpG-binding domain-contain...   108   1e-21
ref|XP_004239350.1| PREDICTED: methyl-CpG-binding domain-contain...   105   1e-20

>ref|XP_006365207.1| PREDICTED: methyl-CpG-binding domain-containing protein 9-like
           [Solanum tuberosum]
          Length = 2173

 Score =  108 bits (270), Expect = 1e-21
 Identities = 61/101 (60%), Positives = 69/101 (68%), Gaps = 6/101 (5%)
 Frame = -2

Query: 287 MDFSSNVNHRQTLPLHIDLNETPLPSPRETERGLFLEHPEPTRVKKEPVESDSGQRNVRV 108
           MD SSN+N  + LP HIDLNETPLPSPRE ERGLFLEHPE +R K   V +   Q NVRV
Sbjct: 1   MDCSSNLN--RALPFHIDLNETPLPSPREIERGLFLEHPESSRGKS--VVTPPSQTNVRV 56

Query: 107 CSSCQSGSGCTRMRKPGQEEWKCFKCVLGG------GGSSG 3
           CSSC+ GS   +  +  +EEWKCFKCVL G       GSSG
Sbjct: 57  CSSCEIGSSWRKDEQ--KEEWKCFKCVLSGRRRSSDDGSSG 95


>ref|XP_004239350.1| PREDICTED: methyl-CpG-binding domain-containing protein 9-like
           [Solanum lycopersicum]
          Length = 2151

 Score =  105 bits (262), Expect = 1e-20
 Identities = 59/101 (58%), Positives = 68/101 (67%), Gaps = 6/101 (5%)
 Frame = -2

Query: 287 MDFSSNVNHRQTLPLHIDLNETPLPSPRETERGLFLEHPEPTRVKKEPVESDSGQRNVRV 108
           MD SSN+N  + L  HIDLNETPLPSPRE ERGLF+EHPE +R K   V +   Q NVRV
Sbjct: 1   MDCSSNLN--RALSFHIDLNETPLPSPREIERGLFIEHPESSRAKS--VLTPPSQTNVRV 56

Query: 107 CSSCQSGSGCTRMRKPGQEEWKCFKCVLGG------GGSSG 3
           CSSC+ GS   +  +  +EEWKCFKCVL G       GSSG
Sbjct: 57  CSSCEIGSSWRKDEQ--KEEWKCFKCVLSGRRRSSDDGSSG 95


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