BLASTX nr result
ID: Atropa21_contig00039528
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00039528
(519 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAT39281.2| Integrase core domain containing protein [Solanum... 162 3e-38
dbj|BAK41511.1| polyprotein [Arabidopsis thaliana] 130 1e-37
gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thal... 130 2e-37
dbj|BAA78425.1| polyprotein [Arabidopsis thaliana] gi|338746551|... 129 2e-37
dbj|BAK41507.1| polyprotein [Arabidopsis thaliana] 129 2e-37
gb|AAK62793.1|AC027036_14 polyprotein, putative [Arabidopsis tha... 128 5e-37
dbj|BAA78423.1| polyprotein [Arabidopsis thaliana] 128 5e-37
gb|AAT38797.2| Polyprotein, putative [Solanum demissum] 140 3e-36
dbj|BAM42646.1| polyprotein [Arabidopsis thaliana] 130 4e-36
dbj|BAA78426.1| polyprotein [Arabidopsis thaliana] 130 6e-36
dbj|BAM42650.1| Polyprotein [Arabidopsis thaliana] 130 6e-36
dbj|BAM42649.1| Polyprotein [Arabidopsis thaliana] 130 6e-36
dbj|BAM42647.1| polyprotein [Arabidopsis thaliana] gi|403406144|... 130 6e-36
gb|AAC79110.1| putative polyprotein of LTR transposon [Arabidops... 130 6e-36
dbj|BAM44532.1| polyprotein [Arabidopsis thaliana] 130 6e-36
dbj|BAM44530.1| polyprotein [Arabidopsis thaliana] 130 6e-36
dbj|BAM44529.1| polyprotein [Arabidopsis thaliana] 130 6e-36
dbj|BAA78424.1| polyprotein [Arabidopsis thaliana] gi|404433798|... 130 6e-36
dbj|BAM44531.1| polyprotein [Arabidopsis thaliana] 130 8e-36
dbj|BAM44535.1| polyprotein [Arabidopsis thaliana] 129 1e-35
>gb|AAT39281.2| Integrase core domain containing protein [Solanum demissum]
Length = 1760
Score = 162 bits (411), Expect = 3e-38
Identities = 77/99 (77%), Positives = 86/99 (86%)
Frame = -2
Query: 500 SIDRYKYRLVAKGFT*RPSLDYHSTFNQVVKSLTIRLMLTIAIQYNWPIHPINVNNAFLQ 321
++ YK RLVAKGFT P LD+HSTF+ VVK +TIRL+LTI QYNWPIH I+VNNAFLQ
Sbjct: 940 NVVEYKARLVAKGFTQHPGLDFHSTFSPVVKPITIRLVLTIVTQYNWPIHQIDVNNAFLQ 999
Query: 320 GHLEEEVYMRQPPGFEDRSLSTHVCKLNKAIYGLKQSPR 204
G LEEEVYMRQPPGFED+SLSTHVCKLNK IYGLKQ+PR
Sbjct: 1000 GSLEEEVYMRQPPGFEDQSLSTHVCKLNKVIYGLKQAPR 1038
Score = 85.1 bits (209), Expect = 9e-15
Identities = 47/91 (51%), Positives = 56/91 (61%)
Frame = -1
Query: 273 RSKSLHPCLQIEQSDLWFETIPQTWYTELKNYLLDIGFVKSQFGSSLFILNNFGFXXXXX 94
+S S H C ++ + + P+ WY ELK+YLL +GFVKSQ SSLFIL+NFGF
Sbjct: 1017 QSLSTHVC-KLNKVIYGLKQAPRAWYNELKSYLLTVGFVKSQSDSSLFILHNFGFTVYVL 1075
Query: 93 XXXXXXXXTRNQIRGVHHIIDGLANRFSLKD 1
T NQI GV HIIDGL RFSLKD
Sbjct: 1076 IYVDAIIITGNQIHGVRHIIDGLFTRFSLKD 1106
>dbj|BAK41511.1| polyprotein [Arabidopsis thaliana]
Length = 1466
Score = 130 bits (327), Expect(2) = 1e-37
Identities = 60/105 (57%), Positives = 79/105 (75%)
Frame = -2
Query: 518 KNKLDSSIDRYKYRLVAKGFT*RPSLDYHSTFNQVVKSLTIRLMLTIAIQYNWPIHPINV 339
K D S++RYK RLVAKG+ RP LDY TF+ V+KS +IR++L +A+ +WPI ++V
Sbjct: 1007 KYNSDGSLNRYKVRLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDV 1066
Query: 338 NNAFLQGHLEEEVYMRQPPGFEDRSLSTHVCKLNKAIYGLKQSPR 204
NNAFLQG L ++VYM QPPGF D+ +VCKL KA+YGLKQ+PR
Sbjct: 1067 NNAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPR 1111
Score = 51.6 bits (122), Expect(2) = 1e-37
Identities = 28/70 (40%), Positives = 37/70 (52%)
Frame = -1
Query: 210 PQTWYTELKNYLLDIGFVKSQFGSSLFILNNFGFXXXXXXXXXXXXXTRNQIRGVHHIID 31
P+ WY EL+NYLL IGFV S +SLF+L T N +H+ +D
Sbjct: 1110 PRAWYVELRNYLLTIGFVNSVSDTSLFVLQRGKSIVYMLVYVDDILITGNDPTLLHNTLD 1169
Query: 30 GLANRFSLKD 1
L+ RFS+KD
Sbjct: 1170 NLSQRFSVKD 1179
>gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thaliana]
gi|18265373|dbj|BAB84015.1| polyprotein [Arabidopsis
thaliana]
Length = 1466
Score = 130 bits (326), Expect(2) = 2e-37
Identities = 60/105 (57%), Positives = 79/105 (75%)
Frame = -2
Query: 518 KNKLDSSIDRYKYRLVAKGFT*RPSLDYHSTFNQVVKSLTIRLMLTIAIQYNWPIHPINV 339
K D S++RYK RLVAKG+ RP LDY TF+ V+KS +IR++L +A+ +WPI ++V
Sbjct: 1007 KYNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDV 1066
Query: 338 NNAFLQGHLEEEVYMRQPPGFEDRSLSTHVCKLNKAIYGLKQSPR 204
NNAFLQG L ++VYM QPPGF D+ +VCKL KA+YGLKQ+PR
Sbjct: 1067 NNAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPR 1111
Score = 51.6 bits (122), Expect(2) = 2e-37
Identities = 28/70 (40%), Positives = 37/70 (52%)
Frame = -1
Query: 210 PQTWYTELKNYLLDIGFVKSQFGSSLFILNNFGFXXXXXXXXXXXXXTRNQIRGVHHIID 31
P+ WY EL+NYLL IGFV S +SLF+L T N +H+ +D
Sbjct: 1110 PRAWYVELRNYLLTIGFVNSVSDTSLFVLQRGKSIVYMLVYVDDILITGNDPTLLHNTLD 1169
Query: 30 GLANRFSLKD 1
L+ RFS+KD
Sbjct: 1170 NLSQRFSVKD 1179
>dbj|BAA78425.1| polyprotein [Arabidopsis thaliana] gi|338746551|dbj|BAK41505.1|
polyprotein [Arabidopsis thaliana]
gi|338746553|dbj|BAK41506.1| polyprotein [Arabidopsis
thaliana] gi|338746557|dbj|BAK41508.1| polyprotein
[Arabidopsis thaliana] gi|338746559|dbj|BAK41509.1|
polyprotein [Arabidopsis thaliana]
Length = 1447
Score = 129 bits (325), Expect(2) = 2e-37
Identities = 60/105 (57%), Positives = 79/105 (75%)
Frame = -2
Query: 518 KNKLDSSIDRYKYRLVAKGFT*RPSLDYHSTFNQVVKSLTIRLMLTIAIQYNWPIHPINV 339
K D S++RYK RLVAKG+ RP LDY TF+ V+KS +IR++L +A+ +WPI ++V
Sbjct: 988 KYNSDGSLNRYKARLVAKGYNQRPGLDYVETFSPVIKSTSIRIVLGVAVDRSWPIRQLDV 1047
Query: 338 NNAFLQGHLEEEVYMRQPPGFEDRSLSTHVCKLNKAIYGLKQSPR 204
NNAFLQG L ++VYM QPPGF D+ +VCKL KA+YGLKQ+PR
Sbjct: 1048 NNAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPR 1092
Score = 51.6 bits (122), Expect(2) = 2e-37
Identities = 28/70 (40%), Positives = 37/70 (52%)
Frame = -1
Query: 210 PQTWYTELKNYLLDIGFVKSQFGSSLFILNNFGFXXXXXXXXXXXXXTRNQIRGVHHIID 31
P+ WY EL+NYLL IGFV S +SLF+L T N +H+ +D
Sbjct: 1091 PRAWYVELRNYLLTIGFVNSVSDTSLFVLQRGKSIVYMLVYVDDILITGNDPTLLHNTLD 1150
Query: 30 GLANRFSLKD 1
L+ RFS+KD
Sbjct: 1151 NLSQRFSVKD 1160
>dbj|BAK41507.1| polyprotein [Arabidopsis thaliana]
Length = 1447
Score = 129 bits (325), Expect(2) = 2e-37
Identities = 60/105 (57%), Positives = 79/105 (75%)
Frame = -2
Query: 518 KNKLDSSIDRYKYRLVAKGFT*RPSLDYHSTFNQVVKSLTIRLMLTIAIQYNWPIHPINV 339
K D S++RYK RLVAKG+ RP LDY TF+ V+KS +IR++L +A+ +WPI ++V
Sbjct: 988 KYNSDGSLNRYKARLVAKGYNQRPGLDYVETFSPVIKSTSIRIVLGVAVDRSWPIRQLDV 1047
Query: 338 NNAFLQGHLEEEVYMRQPPGFEDRSLSTHVCKLNKAIYGLKQSPR 204
NNAFLQG L ++VYM QPPGF D+ +VCKL KA+YGLKQ+PR
Sbjct: 1048 NNAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPR 1092
Score = 51.6 bits (122), Expect(2) = 2e-37
Identities = 28/70 (40%), Positives = 37/70 (52%)
Frame = -1
Query: 210 PQTWYTELKNYLLDIGFVKSQFGSSLFILNNFGFXXXXXXXXXXXXXTRNQIRGVHHIID 31
P+ WY EL+NYLL IGFV S +SLF+L T N +H+ +D
Sbjct: 1091 PRAWYVELRNYLLTIGFVNSVSDTSLFVLQRGKSIVYMLVYVDDILITGNDPTLLHNTLD 1150
Query: 30 GLANRFSLKD 1
L+ RFS+KD
Sbjct: 1151 NLSQRFSVKD 1160
>gb|AAK62793.1|AC027036_14 polyprotein, putative [Arabidopsis thaliana]
gi|338746561|dbj|BAK41510.1| polyprotein [Arabidopsis
thaliana]
Length = 1466
Score = 128 bits (322), Expect(2) = 5e-37
Identities = 59/105 (56%), Positives = 78/105 (74%)
Frame = -2
Query: 518 KNKLDSSIDRYKYRLVAKGFT*RPSLDYHSTFNQVVKSLTIRLMLTIAIQYNWPIHPINV 339
K D S++RYK R VAKG+ RP LDY TF+ V+KS +IR++L +A+ +WPI ++V
Sbjct: 1007 KYNSDGSLNRYKARFVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDV 1066
Query: 338 NNAFLQGHLEEEVYMRQPPGFEDRSLSTHVCKLNKAIYGLKQSPR 204
NNAFLQG L ++VYM QPPGF D+ +VCKL KA+YGLKQ+PR
Sbjct: 1067 NNAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPR 1111
Score = 51.6 bits (122), Expect(2) = 5e-37
Identities = 28/70 (40%), Positives = 37/70 (52%)
Frame = -1
Query: 210 PQTWYTELKNYLLDIGFVKSQFGSSLFILNNFGFXXXXXXXXXXXXXTRNQIRGVHHIID 31
P+ WY EL+NYLL IGFV S +SLF+L T N +H+ +D
Sbjct: 1110 PRAWYVELRNYLLTIGFVNSVSDTSLFVLQRGKSIVYMLVYVDDILITGNDPTLLHNTLD 1169
Query: 30 GLANRFSLKD 1
L+ RFS+KD
Sbjct: 1170 NLSQRFSVKD 1179
>dbj|BAA78423.1| polyprotein [Arabidopsis thaliana]
Length = 1431
Score = 128 bits (322), Expect(2) = 5e-37
Identities = 59/105 (56%), Positives = 78/105 (74%)
Frame = -2
Query: 518 KNKLDSSIDRYKYRLVAKGFT*RPSLDYHSTFNQVVKSLTIRLMLTIAIQYNWPIHPINV 339
K D S++RYK R VAKG+ RP LDY TF+ V+KS +IR++L +A+ +WPI ++V
Sbjct: 972 KYNSDGSLNRYKARFVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDV 1031
Query: 338 NNAFLQGHLEEEVYMRQPPGFEDRSLSTHVCKLNKAIYGLKQSPR 204
NNAFLQG L ++VYM QPPGF D+ +VCKL KA+YGLKQ+PR
Sbjct: 1032 NNAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPR 1076
Score = 51.6 bits (122), Expect(2) = 5e-37
Identities = 28/70 (40%), Positives = 37/70 (52%)
Frame = -1
Query: 210 PQTWYTELKNYLLDIGFVKSQFGSSLFILNNFGFXXXXXXXXXXXXXTRNQIRGVHHIID 31
P+ WY EL+NYLL IGFV S +SLF+L T N +H+ +D
Sbjct: 1075 PRAWYVELRNYLLTIGFVNSVSDTSLFVLQRGKSIVYMLVYVDDILITGNDPTLLHNTLD 1134
Query: 30 GLANRFSLKD 1
L+ RFS+KD
Sbjct: 1135 NLSQRFSVKD 1144
>gb|AAT38797.2| Polyprotein, putative [Solanum demissum]
Length = 1793
Score = 140 bits (354), Expect(2) = 3e-36
Identities = 63/103 (61%), Positives = 83/103 (80%)
Frame = -2
Query: 512 KLDSSIDRYKYRLVAKGFT*RPSLDYHSTFNQVVKSLTIRLMLTIAIQYNWPIHPINVNN 333
K+D SIDRYK RLVAKGFT RP +D H TF+ +VK TIR++L+I +++WP+ ++VNN
Sbjct: 1438 KVDGSIDRYKARLVAKGFTQRPGVDLHDTFSPIVKPTTIRVVLSITTKFDWPLRQLDVNN 1497
Query: 332 AFLQGHLEEEVYMRQPPGFEDRSLSTHVCKLNKAIYGLKQSPR 204
AFLQG L+EEVYM QP GFED++ TH+C+L+KA Y LKQ+PR
Sbjct: 1498 AFLQGRLDEEVYMEQPRGFEDKTCPTHICRLHKAFYRLKQAPR 1540
Score = 37.0 bits (84), Expect(2) = 3e-36
Identities = 22/65 (33%), Positives = 33/65 (50%)
Frame = -1
Query: 210 PQTWYTELKNYLLDIGFVKSQFGSSLFILNNFGFXXXXXXXXXXXXXTRNQIRGVHHIID 31
P+ Y ELKN+LL +GF+KS+ +SLF+ ++ T N V+ +I
Sbjct: 1539 PRACYNELKNHLLLLGFIKSESDNSLFVRHHSHAIVYLLVYVDDIIVTGNNTSVVNQVIS 1598
Query: 30 GLANR 16
LA R
Sbjct: 1599 SLAAR 1603
Score = 68.6 bits (166), Expect(2) = 3e-13
Identities = 35/75 (46%), Positives = 45/75 (60%)
Frame = -2
Query: 428 TFNQVVKSLTIRLMLTIAIQYNWPIHPINVNNAFLQGHLEEEVYMRQPPGFEDRSLSTHV 249
TF V + TI+L+L A +W IH ++V +AFL L EE+Y+ QP GF V
Sbjct: 937 TFAPVARYDTIKLILAFASHSSWQIHQLDVKSAFLNSLLAEEIYVEQPDGFSIPGKEDQV 996
Query: 248 CKLNKAIYGLKQSPR 204
L KA+YGLKQSPR
Sbjct: 997 YLLTKALYGLKQSPR 1011
Score = 32.0 bits (71), Expect(2) = 3e-13
Identities = 10/28 (35%), Positives = 20/28 (71%)
Frame = -1
Query: 210 PQTWYTELKNYLLDIGFVKSQFGSSLFI 127
P+ WY + N+L+ +GF +SQ ++L++
Sbjct: 1010 PRAWYERMDNHLIQLGFSRSQSEATLYV 1037
>dbj|BAM42646.1| polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 130 bits (328), Expect(2) = 4e-36
Identities = 60/101 (59%), Positives = 79/101 (78%)
Frame = -2
Query: 506 DSSIDRYKYRLVAKGFT*RPSLDYHSTFNQVVKSLTIRLMLTIAIQYNWPIHPINVNNAF 327
D S++RYK RLVAKG+ RP LDY TF+ V+KS +IR++L +A+ +WPI ++VNNAF
Sbjct: 1013 DGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAF 1072
Query: 326 LQGHLEEEVYMRQPPGFEDRSLSTHVCKLNKAIYGLKQSPR 204
LQG L +EVYM QPPGF D++ +VC+L KAIYGLKQ+PR
Sbjct: 1073 LQGTLTDEVYMSQPPGFVDKNRPDYVCRLRKAIYGLKQAPR 1113
Score = 46.2 bits (108), Expect(2) = 4e-36
Identities = 25/70 (35%), Positives = 35/70 (50%)
Frame = -1
Query: 210 PQTWYTELKNYLLDIGFVKSQFGSSLFILNNFGFXXXXXXXXXXXXXTRNQIRGVHHIID 31
P+ WY EL+ YLL +GFV S +SLF+L T N + H +D
Sbjct: 1112 PRAWYVELRTYLLTVGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLD 1171
Query: 30 GLANRFSLKD 1
L+ RFS+K+
Sbjct: 1172 ALSQRFSVKE 1181
>dbj|BAA78426.1| polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 130 bits (327), Expect(2) = 6e-36
Identities = 60/101 (59%), Positives = 78/101 (77%)
Frame = -2
Query: 506 DSSIDRYKYRLVAKGFT*RPSLDYHSTFNQVVKSLTIRLMLTIAIQYNWPIHPINVNNAF 327
D S++RYK RLVAKG+ RP LDY TF+ V+KS +IR++L +A+ +WPI ++VNNAF
Sbjct: 1013 DGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAF 1072
Query: 326 LQGHLEEEVYMRQPPGFEDRSLSTHVCKLNKAIYGLKQSPR 204
LQG L +EVYM QPPGF D+ +VC+L KAIYGLKQ+PR
Sbjct: 1073 LQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPR 1113
Score = 46.2 bits (108), Expect(2) = 6e-36
Identities = 25/70 (35%), Positives = 35/70 (50%)
Frame = -1
Query: 210 PQTWYTELKNYLLDIGFVKSQFGSSLFILNNFGFXXXXXXXXXXXXXTRNQIRGVHHIID 31
P+ WY EL+ YLL +GFV S +SLF+L T N + H +D
Sbjct: 1112 PRAWYVELRTYLLTVGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLD 1171
Query: 30 GLANRFSLKD 1
L+ RFS+K+
Sbjct: 1172 ALSQRFSVKE 1181
>dbj|BAM42650.1| Polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 130 bits (327), Expect(2) = 6e-36
Identities = 60/101 (59%), Positives = 78/101 (77%)
Frame = -2
Query: 506 DSSIDRYKYRLVAKGFT*RPSLDYHSTFNQVVKSLTIRLMLTIAIQYNWPIHPINVNNAF 327
D S++RYK RLVAKG+ RP LDY TF+ V+KS +IR++L +A+ +WPI ++VNNAF
Sbjct: 1013 DGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAF 1072
Query: 326 LQGHLEEEVYMRQPPGFEDRSLSTHVCKLNKAIYGLKQSPR 204
LQG L +EVYM QPPGF D+ +VC+L KAIYGLKQ+PR
Sbjct: 1073 LQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPR 1113
Score = 46.2 bits (108), Expect(2) = 6e-36
Identities = 25/70 (35%), Positives = 35/70 (50%)
Frame = -1
Query: 210 PQTWYTELKNYLLDIGFVKSQFGSSLFILNNFGFXXXXXXXXXXXXXTRNQIRGVHHIID 31
P+ WY EL+ YLL +GFV S +SLF+L T N + H +D
Sbjct: 1112 PRAWYVELRTYLLTVGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLD 1171
Query: 30 GLANRFSLKD 1
L+ RFS+K+
Sbjct: 1172 ALSQRFSVKE 1181
>dbj|BAM42649.1| Polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 130 bits (327), Expect(2) = 6e-36
Identities = 60/101 (59%), Positives = 78/101 (77%)
Frame = -2
Query: 506 DSSIDRYKYRLVAKGFT*RPSLDYHSTFNQVVKSLTIRLMLTIAIQYNWPIHPINVNNAF 327
D S++RYK RLVAKG+ RP LDY TF+ V+KS +IR++L +A+ +WPI ++VNNAF
Sbjct: 1013 DGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAF 1072
Query: 326 LQGHLEEEVYMRQPPGFEDRSLSTHVCKLNKAIYGLKQSPR 204
LQG L +EVYM QPPGF D+ +VC+L KAIYGLKQ+PR
Sbjct: 1073 LQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPR 1113
Score = 46.2 bits (108), Expect(2) = 6e-36
Identities = 25/70 (35%), Positives = 35/70 (50%)
Frame = -1
Query: 210 PQTWYTELKNYLLDIGFVKSQFGSSLFILNNFGFXXXXXXXXXXXXXTRNQIRGVHHIID 31
P+ WY EL+ YLL +GFV S +SLF+L T N + H +D
Sbjct: 1112 PRAWYVELRTYLLTVGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLD 1171
Query: 30 GLANRFSLKD 1
L+ RFS+K+
Sbjct: 1172 ALSQRFSVKE 1181
>dbj|BAM42647.1| polyprotein [Arabidopsis thaliana] gi|403406144|dbj|BAM42648.1|
polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 130 bits (327), Expect(2) = 6e-36
Identities = 60/101 (59%), Positives = 78/101 (77%)
Frame = -2
Query: 506 DSSIDRYKYRLVAKGFT*RPSLDYHSTFNQVVKSLTIRLMLTIAIQYNWPIHPINVNNAF 327
D S++RYK RLVAKG+ RP LDY TF+ V+KS +IR++L +A+ +WPI ++VNNAF
Sbjct: 1013 DGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAF 1072
Query: 326 LQGHLEEEVYMRQPPGFEDRSLSTHVCKLNKAIYGLKQSPR 204
LQG L +EVYM QPPGF D+ +VC+L KAIYGLKQ+PR
Sbjct: 1073 LQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPR 1113
Score = 46.2 bits (108), Expect(2) = 6e-36
Identities = 25/70 (35%), Positives = 35/70 (50%)
Frame = -1
Query: 210 PQTWYTELKNYLLDIGFVKSQFGSSLFILNNFGFXXXXXXXXXXXXXTRNQIRGVHHIID 31
P+ WY EL+ YLL +GFV S +SLF+L T N + H +D
Sbjct: 1112 PRAWYVELRTYLLTVGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLD 1171
Query: 30 GLANRFSLKD 1
L+ RFS+K+
Sbjct: 1172 ALSQRFSVKE 1181
>gb|AAC79110.1| putative polyprotein of LTR transposon [Arabidopsis thaliana]
gi|7269781|emb|CAB77781.1| putative polyprotein of LTR
transposon [Arabidopsis thaliana]
Length = 1456
Score = 130 bits (327), Expect(2) = 6e-36
Identities = 60/101 (59%), Positives = 78/101 (77%)
Frame = -2
Query: 506 DSSIDRYKYRLVAKGFT*RPSLDYHSTFNQVVKSLTIRLMLTIAIQYNWPIHPINVNNAF 327
D S++RYK RLVAKG+ RP LDY TF+ V+KS +IR++L +A+ +WPI ++VNNAF
Sbjct: 994 DGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAF 1053
Query: 326 LQGHLEEEVYMRQPPGFEDRSLSTHVCKLNKAIYGLKQSPR 204
LQG L +EVYM QPPGF D+ +VC+L KAIYGLKQ+PR
Sbjct: 1054 LQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPR 1094
Score = 46.2 bits (108), Expect(2) = 6e-36
Identities = 25/70 (35%), Positives = 35/70 (50%)
Frame = -1
Query: 210 PQTWYTELKNYLLDIGFVKSQFGSSLFILNNFGFXXXXXXXXXXXXXTRNQIRGVHHIID 31
P+ WY EL+ YLL +GFV S +SLF+L T N + H +D
Sbjct: 1093 PRAWYVELRTYLLTVGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLD 1152
Query: 30 GLANRFSLKD 1
L+ RFS+K+
Sbjct: 1153 ALSQRFSVKE 1162
>dbj|BAM44532.1| polyprotein [Arabidopsis thaliana]
Length = 1421
Score = 130 bits (327), Expect(2) = 6e-36
Identities = 60/101 (59%), Positives = 78/101 (77%)
Frame = -2
Query: 506 DSSIDRYKYRLVAKGFT*RPSLDYHSTFNQVVKSLTIRLMLTIAIQYNWPIHPINVNNAF 327
D S++RYK RLVAKG+ RP LDY TF+ V+KS +IR++L +A+ +WPI ++VNNAF
Sbjct: 1013 DGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAF 1072
Query: 326 LQGHLEEEVYMRQPPGFEDRSLSTHVCKLNKAIYGLKQSPR 204
LQG L +EVYM QPPGF D+ +VC+L KAIYGLKQ+PR
Sbjct: 1073 LQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPR 1113
Score = 46.2 bits (108), Expect(2) = 6e-36
Identities = 25/70 (35%), Positives = 35/70 (50%)
Frame = -1
Query: 210 PQTWYTELKNYLLDIGFVKSQFGSSLFILNNFGFXXXXXXXXXXXXXTRNQIRGVHHIID 31
P+ WY EL+ YLL +GFV S +SLF+L T N + H +D
Sbjct: 1112 PRAWYVELRTYLLTVGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLD 1171
Query: 30 GLANRFSLKD 1
L+ RFS+K+
Sbjct: 1172 ALSQRFSVKE 1181
>dbj|BAM44530.1| polyprotein [Arabidopsis thaliana]
Length = 1421
Score = 130 bits (327), Expect(2) = 6e-36
Identities = 60/101 (59%), Positives = 78/101 (77%)
Frame = -2
Query: 506 DSSIDRYKYRLVAKGFT*RPSLDYHSTFNQVVKSLTIRLMLTIAIQYNWPIHPINVNNAF 327
D S++RYK RLVAKG+ RP LDY TF+ V+KS +IR++L +A+ +WPI ++VNNAF
Sbjct: 1013 DGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAF 1072
Query: 326 LQGHLEEEVYMRQPPGFEDRSLSTHVCKLNKAIYGLKQSPR 204
LQG L +EVYM QPPGF D+ +VC+L KAIYGLKQ+PR
Sbjct: 1073 LQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPR 1113
Score = 46.2 bits (108), Expect(2) = 6e-36
Identities = 25/70 (35%), Positives = 35/70 (50%)
Frame = -1
Query: 210 PQTWYTELKNYLLDIGFVKSQFGSSLFILNNFGFXXXXXXXXXXXXXTRNQIRGVHHIID 31
P+ WY EL+ YLL +GFV S +SLF+L T N + H +D
Sbjct: 1112 PRAWYVELRTYLLTVGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLD 1171
Query: 30 GLANRFSLKD 1
L+ RFS+K+
Sbjct: 1172 ALSQRFSVKE 1181
>dbj|BAM44529.1| polyprotein [Arabidopsis thaliana]
Length = 1421
Score = 130 bits (327), Expect(2) = 6e-36
Identities = 60/101 (59%), Positives = 78/101 (77%)
Frame = -2
Query: 506 DSSIDRYKYRLVAKGFT*RPSLDYHSTFNQVVKSLTIRLMLTIAIQYNWPIHPINVNNAF 327
D S++RYK RLVAKG+ RP LDY TF+ V+KS +IR++L +A+ +WPI ++VNNAF
Sbjct: 1013 DGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAF 1072
Query: 326 LQGHLEEEVYMRQPPGFEDRSLSTHVCKLNKAIYGLKQSPR 204
LQG L +EVYM QPPGF D+ +VC+L KAIYGLKQ+PR
Sbjct: 1073 LQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPR 1113
Score = 46.2 bits (108), Expect(2) = 6e-36
Identities = 25/70 (35%), Positives = 35/70 (50%)
Frame = -1
Query: 210 PQTWYTELKNYLLDIGFVKSQFGSSLFILNNFGFXXXXXXXXXXXXXTRNQIRGVHHIID 31
P+ WY EL+ YLL +GFV S +SLF+L T N + H +D
Sbjct: 1112 PRAWYVELRTYLLTVGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLD 1171
Query: 30 GLANRFSLKD 1
L+ RFS+K+
Sbjct: 1172 ALSQRFSVKE 1181
>dbj|BAA78424.1| polyprotein [Arabidopsis thaliana] gi|404433798|dbj|BAM44533.1|
polyprotein [Arabidopsis thaliana]
Length = 1330
Score = 130 bits (327), Expect(2) = 6e-36
Identities = 60/101 (59%), Positives = 78/101 (77%)
Frame = -2
Query: 506 DSSIDRYKYRLVAKGFT*RPSLDYHSTFNQVVKSLTIRLMLTIAIQYNWPIHPINVNNAF 327
D S++RYK RLVAKG+ RP LDY TF+ V+KS +IR++L +A+ +WPI ++VNNAF
Sbjct: 868 DGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAF 927
Query: 326 LQGHLEEEVYMRQPPGFEDRSLSTHVCKLNKAIYGLKQSPR 204
LQG L +EVYM QPPGF D+ +VC+L KAIYGLKQ+PR
Sbjct: 928 LQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPR 968
Score = 46.2 bits (108), Expect(2) = 6e-36
Identities = 25/70 (35%), Positives = 35/70 (50%)
Frame = -1
Query: 210 PQTWYTELKNYLLDIGFVKSQFGSSLFILNNFGFXXXXXXXXXXXXXTRNQIRGVHHIID 31
P+ WY EL+ YLL +GFV S +SLF+L T N + H +D
Sbjct: 967 PRAWYVELRTYLLTVGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLD 1026
Query: 30 GLANRFSLKD 1
L+ RFS+K+
Sbjct: 1027 ALSQRFSVKE 1036
>dbj|BAM44531.1| polyprotein [Arabidopsis thaliana]
Length = 1421
Score = 130 bits (327), Expect(2) = 8e-36
Identities = 60/101 (59%), Positives = 78/101 (77%)
Frame = -2
Query: 506 DSSIDRYKYRLVAKGFT*RPSLDYHSTFNQVVKSLTIRLMLTIAIQYNWPIHPINVNNAF 327
D S++RYK RLVAKG+ RP LDY TF+ V+KS +IR++L +A+ +WPI ++VNNAF
Sbjct: 1013 DGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAF 1072
Query: 326 LQGHLEEEVYMRQPPGFEDRSLSTHVCKLNKAIYGLKQSPR 204
LQG L +EVYM QPPGF D+ +VC+L KAIYGLKQ+PR
Sbjct: 1073 LQGTLTDEVYMSQPPGFVDKDRPDYVCRLKKAIYGLKQAPR 1113
Score = 45.8 bits (107), Expect(2) = 8e-36
Identities = 25/70 (35%), Positives = 35/70 (50%)
Frame = -1
Query: 210 PQTWYTELKNYLLDIGFVKSQFGSSLFILNNFGFXXXXXXXXXXXXXTRNQIRGVHHIID 31
P+ WY EL+ YLL +GFV S +SLF+L T N + H +D
Sbjct: 1112 PRAWYVELQTYLLTVGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLD 1171
Query: 30 GLANRFSLKD 1
L+ RFS+K+
Sbjct: 1172 ALSQRFSVKE 1181
>dbj|BAM44535.1| polyprotein [Arabidopsis thaliana]
Length = 1475
Score = 129 bits (325), Expect(2) = 1e-35
Identities = 60/101 (59%), Positives = 78/101 (77%)
Frame = -2
Query: 506 DSSIDRYKYRLVAKGFT*RPSLDYHSTFNQVVKSLTIRLMLTIAIQYNWPIHPINVNNAF 327
D S++RYK RLVAKG+ RP LDY TF+ V+KS +IR++L +A+ +WPI ++VNNAF
Sbjct: 1013 DGSLNRYKARLVAKGYNQRPGLDYAETFSFVIKSTSIRIVLGVAVDRSWPIRQLDVNNAF 1072
Query: 326 LQGHLEEEVYMRQPPGFEDRSLSTHVCKLNKAIYGLKQSPR 204
LQG L +EVYM QPPGF D+ +VC+L KAIYGLKQ+PR
Sbjct: 1073 LQGTLTDEVYMSQPPGFVDKERPDYVCRLRKAIYGLKQAPR 1113
Score = 46.2 bits (108), Expect(2) = 1e-35
Identities = 25/70 (35%), Positives = 35/70 (50%)
Frame = -1
Query: 210 PQTWYTELKNYLLDIGFVKSQFGSSLFILNNFGFXXXXXXXXXXXXXTRNQIRGVHHIID 31
P+ WY EL+ YLL +GFV S +SLF+L T N + H +D
Sbjct: 1112 PRAWYVELRTYLLTVGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLD 1171
Query: 30 GLANRFSLKD 1
L+ RFS+K+
Sbjct: 1172 ALSQRFSVKE 1181