BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00039231
         (1466 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABI34321.1| RNase H family protein [Solanum demissum]              365   3e-98
ref|XP_004253520.1| PREDICTED: putative ribonuclease H protein A...   270   1e-69
ref|XP_004253259.1| PREDICTED: putative ribonuclease H protein A...   268   6e-69
ref|XP_004253442.1| PREDICTED: putative ribonuclease H protein A...   266   2e-68
ref|XP_004253443.1| PREDICTED: putative ribonuclease H protein A...   261   7e-67
ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258...   253   1e-64
ref|XP_004233578.1| PREDICTED: putative ribonuclease H protein A...   246   1e-62
ref|XP_004248595.1| PREDICTED: uncharacterized protein LOC101261...   239   3e-60
ref|XP_006367184.1| PREDICTED: uncharacterized protein LOC102601...   238   5e-60
ref|XP_004253405.1| PREDICTED: putative ribonuclease H protein A...   236   2e-59
ref|XP_004228797.1| PREDICTED: putative ribonuclease H protein A...   230   1e-57
ref|XP_004253275.1| PREDICTED: uncharacterized protein LOC101268...   227   9e-57
ref|XP_004244918.1| PREDICTED: putative ribonuclease H protein A...   227   9e-57
ref|XP_004253338.1| PREDICTED: putative ribonuclease H protein A...   222   4e-55
ref|XP_004237273.1| PREDICTED: putative ribonuclease H protein A...   209   2e-51
ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein A...   200   1e-48
ref|XP_004243111.1| PREDICTED: putative ribonuclease H protein A...   192   3e-46
ref|XP_004253445.1| PREDICTED: putative ribonuclease H protein A...   189   3e-45
ref|XP_004233579.1| PREDICTED: uncharacterized protein LOC101260...   188   4e-45
ref|XP_004248946.1| PREDICTED: putative ribonuclease H protein A...   186   2e-44

>gb|ABI34321.1| RNase H family protein [Solanum demissum]
          Length = 945

 Score =  365 bits (937), Expect = 3e-98
 Identities = 178/427 (41%), Positives = 249/427 (58%)
 Frame = -2

Query: 1456 ALSNYFDLVPKSRKITVNDFIEGRQWNERKLNDILPEGTVQEITAVNIGKENQKDYIIWK 1277
            ALSN         K  V DFI  R+W+  KL+DILP   V +I ++ IG  NQ DY IW 
Sbjct: 482  ALSNILPPPSHYNKDNVKDFIHKREWDFDKLSDILPPQVVNQIVSIPIGDPNQSDYAIWI 541

Query: 1276 SSMDGNFTNKTAWQNIRKKYPKNKFLSHVWNNKIPFKTSFLTWRMLKRKLPFDEQLSRFG 1097
             S +G+FT K+A+ +      KN   + +W+ K PFK SFLTWR+++ KLPF + + +F 
Sbjct: 542  PSENGHFTTKSAYVDCSNTREKNDMRNKIWHGKFPFKMSFLTWRLVQNKLPFYDTVGKFV 601

Query: 1096 INLDITCKCCTNSNQESLEHVFVQGQVARLL*RYFGAALGIQP*MIDIKSTLITWWRTNT 917
             N+D  C CC N   E++ HVF+   VA  L + FG  LGI        + L TWW   T
Sbjct: 602  DNIDSNCVCCKNMKTETINHVFLNSDVASYLWKKFGGTLGIDTRASSTINLLKTWWNVQT 661

Query: 916  SNEFHKLLIHITPIMICWEIWKNTSACKYGDERKFWPKKMQHQINWNLNREVEFAFPKCN 737
             N  H ++IH  PI+I WEIWK   ACKYGD++K W + M++ + WNL   +   FP   
Sbjct: 662  HNSIHNVIIHTLPILIFWEIWKRRCACKYGDQKKMWYRTMENHVWWNLKMSLRMTFPSFE 721

Query: 736  LPKHWPRLCSMVEKLKHPVICKKVGWKTPPIGWVKINTDGSFYAESGKASIGGLVRSEAG 557
            +   W  L + VE L+     K V W TP I  VKINTDGSF   SG A +G +VR    
Sbjct: 722  IGNSWRDLLNKVESLRPYPKWKIVHWNTPNINCVKINTDGSF--SSGNAGLGWIVRDHTR 779

Query: 556  NLIMAFAAPANCDSNNMTEATAGKYGVNWCVANGYNQFILELDSLLIDNMLLRRDTGNSK 377
             +IMAF+ P++C SNN+ EA A ++G+ WC+  G++   LELDS L+ +M+      N K
Sbjct: 780  RMIMAFSIPSSCSSNNLAEALAARFGILWCLQQGFHNCYLELDSKLVVDMVRNGQATNLK 839

Query: 376  LRDIIDTILQMLDHANYEVKRCYREANQIADGLAKLGANSNGLSLFHQHRFLPTYLKGTF 197
            ++ +++ I+Q++   N EV  CYREANQ+AD LAK    SN   ++H  R +P    G++
Sbjct: 840  IKGVVEDIIQVVAKMNCEVNHCYREANQVADALAKHAVISNEAHMYHDWRDIPKLAVGSY 899

Query: 196  QLDRCQL 176
            QLD+ Q+
Sbjct: 900  QLDKMQM 906


>ref|XP_004253520.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 468

 Score =  270 bits (689), Expect = 1e-69
 Identities = 149/411 (36%), Positives = 218/411 (53%), Gaps = 3/411 (0%)
 Frame = -2

Query: 1411 TVNDFIEGRQWNERKLNDILPEGTVQEITAVNIGKENQK-DYIIWKSSMDGNFTNKTAWQ 1235
            +V DF E  +W  RKL    P   +  I A  I ++  + D  IWK ++ G F  K+AW 
Sbjct: 41   SVADFWENGEWKWRKLVRHAPITHLSNILATRIPQQQHRPDQAIWKLNIHGRFDCKSAWD 100

Query: 1234 NIRKKYPKNKFLSHVWNNKIPFKTSFLTWRMLKRKLPFDEQLSRFGINLDITCKCCTN-S 1058
             IR K  KN F S +W+  IPFKTSFL WR LK KLP +E+LS FGI   + C CC + +
Sbjct: 101  EIRNKKAKNFFNSALWHKFIPFKTSFLLWRTLKGKLPTNEKLSNFGIE-PLPCFCCFDRA 159

Query: 1057 NQESLEHVFVQGQVARLL*RYFGAALGIQP*MIDIKSTLITWWRTNTSNEFHKLLIHITP 878
              +++EH+F  G  A ++  +F A  GIQ     + + +  WW T  +N  HKLL+  TP
Sbjct: 160  GMDTIEHIFNSGPFATIVWNFFAATAGIQADHSTLPALIKQWWTTKPNNAGHKLLLQATP 219

Query: 877  IMICWEIWKNTSACKYGDERKFWPKKMQHQINWNLNREVEFAFPKCNLPKHWPRLCSMVE 698
            I ICW +WKN  ACKYG +      ++++ I  +  + ++ +FP  N P +W  L    E
Sbjct: 220  IFICWNLWKNRCACKYGGKGTNI-SRVKYAIYKDTFKMLKNSFPSINWPANWTTLILTSE 278

Query: 697  KLKHPVICKKVGWKTPPIGWVKINTDGSFYAESGKASIGGLVRSEAGNLIMAFAAPANCD 518
            K  H +   KV W  PP  W+KINTDGS     GK   GG++R + G +IMAF+ P    
Sbjct: 279  KCVHNIKVYKVTWFKPPDQWIKINTDGSALTNEGKIGAGGIIRDKEGKMIMAFSTPLGEG 338

Query: 517  SNNMTEATAGKYGVNWCVANGYNQFILELDSLLIDNMLLRRDTGNSKLRDIIDTILQ-ML 341
            SNN  E  A  +G+ W    G+   +LELDS L+   +  +      L + ++ + Q ++
Sbjct: 339  SNNQAEIEAALFGLTWAFELGFKNILLELDSQLVVQWISNKIAPPWNLTNQLERLQQIII 398

Query: 340  DHANYEVKRCYREANQIADGLAKLGANSNGLSLFHQHRFLPTYLKGTFQLD 188
               N+     +REAN +AD L+K   N+    ++     LP      +Q+D
Sbjct: 399  QTQNFRCCHIFREANWVADALSKHSHNNTAPHVYVHSNQLPKEAHAYYQMD 449


>ref|XP_004253259.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 668

 Score =  268 bits (684), Expect = 6e-69
 Identities = 144/410 (35%), Positives = 221/410 (53%), Gaps = 3/410 (0%)
 Frame = -2

Query: 1408 VNDFIEGRQWNERKLNDILPEGTVQEITAVNIGKEN-QKDYIIWKSSMDGNFTNKTAWQN 1232
            V DF +   WN RKL    P   +  I A  I ++  Q D  IWK S +G FT  TAW+ 
Sbjct: 245  VADFWDNGSWNWRKLIKYAPANQLSSIMATAIPQQQTQHDQAIWKLSSNGCFTCSTAWEE 304

Query: 1231 IRKKYPKNKFLSHVWNNKIPFKTSFLTWRMLKRKLPFDEQLSRFGINLDITCKCCTN-SN 1055
            +R K  K+KF S +W+N IPFK+SFL WR+LK KLP +E+LS FGI    +C CC + + 
Sbjct: 305  VRNKKAKHKFNSLLWHNFIPFKSSFLLWRVLKGKLPTNEKLSNFGIEPS-SCFCCVDRTG 363

Query: 1054 QESLEHVFVQGQVARLL*RYFGAALGIQP*MIDIKSTLITWWRTNTSNEFHKLLIHITPI 875
             +S+EH F  G  A  + R F    G+Q     +++ L  WW     N  H+LL+   PI
Sbjct: 364  MDSIEHTFNSGSFATRVWRAFTTTAGLQEDQSSVQARLRQWWTARLRNASHQLLLQAMPI 423

Query: 874  MICWEIWKNTSACKYGDERKFWPKKMQHQINWNLNREVEFAFPKCNLPKHWPRLCSMVEK 695
             I W +WKN  ACKYG  +     ++++ I  +  + ++ AFP  N P +W  L    E+
Sbjct: 424  FIVWNLWKNRCACKYGG-KSTNISRVKYAIYKDTFKMLKSAFPCINWPGNWAALIQTAER 482

Query: 694  LKHPVICKKVGWKTPPIGWVKINTDGSFYAESGKASIGGLVRSEAGNLIMAFAAPANCDS 515
             KH +      W  PP  W+KINTDGS    +G    GG++R + G +++AFA P    +
Sbjct: 483  CKHEIKVCMTTWNRPPEQWIKINTDGSALINTGHCGAGGIIRDKEGKIVLAFATPLGDGT 542

Query: 514  NNMTEATAGKYGVNWCVANGYNQFILELDSLLIDNMLLRRDTGNSKLRDIIDTILQM-LD 338
            NN  EA A  +G++W +  G+   ++ELDS L+   + +++  +  + + I+ I Q+ + 
Sbjct: 543  NNKAEAEAALFGLSWALELGHRNILIELDSQLVVQWISKKEPPHWNVINQIERIQQLIMQ 602

Query: 337  HANYEVKRCYREANQIADGLAKLGANSNGLSLFHQHRFLPTYLKGTFQLD 188
              N++    +REAN +AD L+K         ++  +  LP   +  +Q+D
Sbjct: 603  TQNFKCNHIFREANWVADALSKHSHTIATPQVYFSNSQLPREAQAYYQMD 652


>ref|XP_004253442.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 775

 Score =  266 bits (679), Expect = 2e-68
 Identities = 145/410 (35%), Positives = 219/410 (53%), Gaps = 3/410 (0%)
 Frame = -2

Query: 1408 VNDFIEGRQWNERKLNDILPEGTVQEITAVNIGKEN-QKDYIIWKSSMDGNFTNKTAWQN 1232
            V DF E   WN RKL +  P   +  I A+ I ++  Q+D  +WK    G F+  +AW+ 
Sbjct: 349  VADFWENGVWNYRKLVEQAPASQLANIMAIAIPQQQYQQDQPVWKLHSQGKFSCHSAWEE 408

Query: 1231 IRKKYPKNKFLSHVWNNKIPFKTSFLTWRMLKRKLPFDEQLSRFGINLDITCKCCTN-SN 1055
            IR K  KN+FLS +W+N IPFKTSFL WR+LK K+P +E+L+ FGI     C CC + + 
Sbjct: 409  IRNKKAKNRFLSFLWHNFIPFKTSFLLWRILKGKIPTNEKLTNFGIEPS-PCYCCVDRAG 467

Query: 1054 QESLEHVFVQGQVARLL*RYFGAALGIQP*MIDIKSTLITWWRTNTSNEFHKLLIHITPI 875
             +S+ H+F  G  A  + + F A  G+Q     +++ L  WW   + N  H+LL+  TPI
Sbjct: 468  MDSINHIFNTGNFAGRVWKSFAAGAGLQQDQQTLQARLKQWWTAKSCNAGHQLLLQATPI 527

Query: 874  MICWEIWKNTSACKYGDERKFWPKKMQHQINWNLNREVEFAFPKCNLPKHWPRLCSMVEK 695
             ICW +WKN  ACKYG +      ++++ +  +  + ++ AFP    P HW  L    EK
Sbjct: 528  FICWNLWKNRCACKYGGKATN-ISRVKYAVYKDNFKMMKNAFPHIQWPAHWTALIHTSEK 586

Query: 694  LKHPVICKKVGWKTPPIGWVKINTDGSFYAESGKASIGGLVRSEAGNLIMAFAAPANCDS 515
             KH     +V W  PP  W+KINTDGS     G    GG++R++ G L+MAFA      S
Sbjct: 587  CKHDTKVCQVVWNRPPEEWIKINTDGSALTNPGNIGAGGIIRNKEGKLVMAFATSLGEGS 646

Query: 514  NNMTEATAGKYGVNWCVANGYNQFILELDSLLIDNMLLRRDTGNSKLRDIIDTILQM-LD 338
            NN  E  A   G+   +  GY   I+ELDS LI   + ++   +  + + I+ +  + + 
Sbjct: 647  NNKAETEAALIGLVHALELGYRNIIMELDSQLIVQWISKKSVHHWSVSNQIERLQYLIMQ 706

Query: 337  HANYEVKRCYREANQIADGLAKLGANSNGLSLFHQHRFLPTYLKGTFQLD 188
              N++ +  +REAN +AD L+K   +     L+     LP      +++D
Sbjct: 707  TQNFKCQHIFREANWVADALSKHSHHITSPQLYFDSNQLPKEANAYYRMD 756


>ref|XP_004253443.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 775

 Score =  261 bits (666), Expect = 7e-67
 Identities = 142/410 (34%), Positives = 220/410 (53%), Gaps = 3/410 (0%)
 Frame = -2

Query: 1408 VNDFIEGRQWNERKLNDILPEGTVQEITAVNIGKE-NQKDYIIWKSSMDGNFTNKTAWQN 1232
            V DF E   WN RKL +  P   +  I A+ I ++ +Q+D  +WK    G F+  +AW+ 
Sbjct: 349  VADFWENGVWNCRKLVEQAPASQLANIMAIAIPQQQHQQDQPVWKLHSQGKFSCHSAWEE 408

Query: 1231 IRKKYPKNKFLSHVWNNKIPFKTSFLTWRMLKRKLPFDEQLSRFGINLDITCKCCTN-SN 1055
            IR K  KN+FLS +W+N IPFKTSFL WR+LK K+P +E+L+ FGI     C CC + + 
Sbjct: 409  IRNKKAKNRFLSFLWHNFIPFKTSFLLWRILKGKIPTNEKLTNFGIEPS-PCYCCVDRAG 467

Query: 1054 QESLEHVFVQGQVARLL*RYFGAALGIQP*MIDIKSTLITWWRTNTSNEFHKLLIHITPI 875
             +S+ H+F  G  A  + + F A  G+Q     +++ L  WW   + N  H+LL+  TPI
Sbjct: 468  MDSINHIFNTGNFAGRVWKSFAAGAGLQEDQQTLQARLKQWWTAKSCNAGHQLLLQATPI 527

Query: 874  MICWEIWKNTSACKYGDERKFWPKKMQHQINWNLNREVEFAFPKCNLPKHWPRLCSMVEK 695
             ICW +WKN  ACKYG +      ++++ +  +  + ++ AFP    P HW  L    EK
Sbjct: 528  FICWNLWKNRCACKYGGKATN-ISRVKYVVYKDNFKMMKNAFPHIQWPAHWTALIHTSEK 586

Query: 694  LKHPVICKKVGWKTPPIGWVKINTDGSFYAESGKASIGGLVRSEAGNLIMAFAAPANCDS 515
             KH     +V W  PP  W+KINTDGS     GK   GG++R++ G L+MAFA      +
Sbjct: 587  CKHDTKVCQVVWNRPPEEWIKINTDGSALTNPGKIGAGGIIRNKEGKLVMAFATSLGEGT 646

Query: 514  NNMTEATAGKYGVNWCVANGYNQFILELDSLLIDNMLLRRDTGNSKLRDIIDTILQM-LD 338
             N  +  A   G+   +  GY   I+ELDS LI   + ++   +  + + I+ +  + + 
Sbjct: 647  KNKAKTEAALIGLVHALELGYRNIIMELDSQLIVQWISKKSVHHWSVSNQIERLQYLIMQ 706

Query: 337  HANYEVKRCYREANQIADGLAKLGANSNGLSLFHQHRFLPTYLKGTFQLD 188
              N++ +  ++EAN +AD L+K   +     L+     LP      +++D
Sbjct: 707  TQNFKCQHIFKEANWVADALSKHNHHITSPQLYFDSNQLPKEANAYYRMD 756


>ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258077 [Solanum
            lycopersicum]
          Length = 1454

 Score =  253 bits (646), Expect = 1e-64
 Identities = 144/427 (33%), Positives = 217/427 (50%), Gaps = 2/427 (0%)
 Frame = -2

Query: 1459 RALSNYFDLVPKSRKITVNDFIEGRQWNERKLNDILPEGTVQEITAVNIGKE-NQKDYII 1283
            + L+   D V       V DF+    WNER L   +P   V  I    I  +    D  I
Sbjct: 1012 KPLAMQCDHVSSLNNSVVADFLINGNWNERLLRQHVPPQLVPYILQTKINYQAGNIDTSI 1071

Query: 1282 WKSSMDGNFTNKTAWQNIRKKYPKNKFLSHVWNNKIPFKTSFLTWRMLKRKLPFDEQLSR 1103
            W  +  G FT  +AW +IRKK  K+   + +W+ +IPFK SF  WR L+ KLP +E L R
Sbjct: 1072 WTPTESGQFTISSAWDSIRKKRNKDPINNIIWHKQIPFKVSFFIWRALRGKLPTNENLQR 1131

Query: 1102 FGINLDITCKCCTNSNQESLEHVFVQGQVARLL*RYFGAALGIQP*MIDIKSTLITWWRT 923
             G NL   C CC N  ++ + H+ + G  A+ + + + +A+G+ P    ++  L+ W   
Sbjct: 1132 IGKNLS-DCYCCYNKGKDDINHILINGNFAKYIWKIYSSAVGVLPINTTLRDLLLQWRNQ 1190

Query: 922  NTSNEFHKLLIHITPIMICWEIWKNTSACKYGDERKFWPKKMQHQINWNLNREVEFAFPK 743
              +NE HKLLIHI P  ICW +WKN  A KYG +      ++Q+ I  N+ + +   FP 
Sbjct: 1191 QYTNEVHKLLIHILPNFICWNLWKNRCAVKYGLKNSSI-YRVQYGIFKNIMQVITIVFPS 1249

Query: 742  CNLPKHWPRLCSMVEKLKHPVICKKVGWKTPPIGWVKINTDGSFYAESGKASIGGLVRSE 563
                  W  L ++VE+ K       V W  P +G  K+NTDGS    SGK   GG++R  
Sbjct: 1250 IPWQTSWNNLINIVEQCKQHYKILIVKWNKPDLGKYKLNTDGSALQNSGKIGGGGILRDN 1309

Query: 562  AGNLIMAFAAPANCDSNNMTEATAGKYGVNWCVANGYNQFILELDSLLIDNMLLRRDTGN 383
             G +I AF+ P    +NN  E  A  +G++WC  +GY +  LE+DS L+ N +       
Sbjct: 1310 QGKIIYAFSLPFGFGTNNFAEIKAALHGLDWCEQHGYKKIELEVDSKLLCNWINSNINIP 1369

Query: 382  SKLRDIIDTILQMLDHAN-YEVKRCYREANQIADGLAKLGANSNGLSLFHQHRFLPTYLK 206
             +  ++I  I Q++   + ++    YREAN  AD L+K   N   L  F+  R L   ++
Sbjct: 1370 WRYEELIQQIHQIIRKMDQFQCHHIYREANCTADLLSKWSHNLEILQKFYTTRQLKEPIR 1429

Query: 205  GTFQLDR 185
            G++ L++
Sbjct: 1430 GSYLLEK 1436


>ref|XP_004233578.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 955

 Score =  246 bits (629), Expect = 1e-62
 Identities = 141/428 (32%), Positives = 220/428 (51%), Gaps = 4/428 (0%)
 Frame = -2

Query: 1456 ALSNYFDLVPKSRKITVNDFIEGRQWNERKLNDILPEGTVQEITAVNIGKE-NQKDYIIW 1280
            AL+N    +     I V+DF+    WNER +   +P   V +I         N +D  IW
Sbjct: 514  ALANQVINISSLNNIHVSDFLTNGIWNERYVRQHVPPTMVPDIMQTQFKYNINIEDTAIW 573

Query: 1279 KSSMDGNFTNKTAWQNIRKKYPKNKFLSHVWNNKIPFKTSFLTWRMLKRKLPFDEQLSRF 1100
                +G FT  +AW+ IRKK   +   + VW+  IPFK SF  WR L+ KLP  + L +F
Sbjct: 574  TPEENGKFTIASAWEVIRKKKSTDIINNSVWHKHIPFKISFFIWRALRGKLPTYDYLQKF 633

Query: 1099 GINLDITCKCCTNSNQESLEHVFVQGQVARLL*RYFGAALGIQP*MIDIKSTLITWWRTN 920
            G N    C CC     + + H+ + G  A  + +Y+    GI    ID++S L+ W    
Sbjct: 634  GSNAT-DCYCCNRKGIDDINHILITGNFANYIWKYYAPTFGITQINIDLRSLLLQWTNLP 692

Query: 919  TSNEFHKLLIHITPIMICWEIWKNTSACKYGDERKFWPKKMQHQINWNLNREVEFAFPKC 740
            +SN+ +KLLI I P  ICW +WKN  A KYG++     +++Q+ I  ++ + ++  FP  
Sbjct: 693  SSNQVYKLLISILPNFICWHLWKNMCAVKYGNKISSI-QRVQYGIFKDVMQTIKIVFPNI 751

Query: 739  NLPKHWPRLCSMVEKLKHPVICKKVGWKTPPIGWVKINTDGSFYAESGKASIGGLVRSEA 560
                 W RL ++VE+ +  +    V W+ P  G  K+NTDGS   ESGK   GG++R   
Sbjct: 752  PWQHSWYRLINLVEQCQQQLKVIMVSWRKPQFGIYKLNTDGSALPESGKIGGGGILRDYT 811

Query: 559  GNLIMAFAAPANCDSNNMTEATAGKYGVNWCVANGYNQFILELDSLLIDNMLLRRDTGNS 380
            G L  AF+ P    +NN+ E  A +YG++WC  +GY   +LE+DS ++   +        
Sbjct: 812  GKLHYAFSIPFGLGTNNIAEMEAARYGLDWCEQHGYKSILLEVDSEILQKWISNTIAIPW 871

Query: 379  KLRDIIDTILQM---LDHANYEVKRCYREANQIADGLAKLGANSNGLSLFHQHRFLPTYL 209
            + +  I+ I  +   +DH  +E +  YRE N  AD L+K     + L  F+  + L   +
Sbjct: 872  RYQQTIEHIQDIGRKMDH--FECQHVYREVNGTADLLSKWSHKLDILQHFYTSQQLIGSI 929

Query: 208  KGTFQLDR 185
            +G++ LD+
Sbjct: 930  RGSYILDK 937


>ref|XP_004248595.1| PREDICTED: uncharacterized protein LOC101261371 [Solanum
            lycopersicum]
          Length = 1246

 Score =  239 bits (609), Expect = 3e-60
 Identities = 141/422 (33%), Positives = 215/422 (50%), Gaps = 5/422 (1%)
 Frame = -2

Query: 1453 LSNYFDLVPKSRKITVNDFIEGRQWNE----RKLNDILPEGTVQEITAVNIGKENQKDYI 1286
            L++  D +       V DFI+  +WNE     ++N +     +Q     + GKE   D  
Sbjct: 821  LASQSDHISSLNNGVVTDFIKDGKWNESLIRHQVNPLFIPKILQTKLNYSTGKE---DNA 877

Query: 1285 IWKSSMDGNFTNKTAWQNIRKKYPKNKFLSHVWNNKIPFKTSFLTWRMLKRKLPFDEQLS 1106
            IW  +  GNFT  +AW+ IR K P +   + +W+  +PFK +F  WR LK KLP +E L 
Sbjct: 878  IWIPTETGNFTIASAWECIRNKRPIDTINTIIWHKHLPFKIAFFIWRALKGKLPTNELLQ 937

Query: 1105 RFGINLDITCKCCTNSNQESLEHVFVQGQVARLL*RYFGAALGIQP*MIDIKSTLITWWR 926
            RFG  +   C CC +  ++ + H+ + G  A+ + +   A LG+ P    ++  L+ W  
Sbjct: 938  RFGSAIS-KCYCCYSKGKDDINHILINGNFAKHIWKIHAAILGVVPANTTLRDQLLHWRN 996

Query: 925  TNTSNEFHKLLIHITPIMICWEIWKNTSACKYGDERKFWPKKMQHQINWNLNREVEFAFP 746
               +NE HKLLIHI P +ICW +WKN  A KYG++      ++Q+ I  ++ + ++  FP
Sbjct: 997  QQVNNEVHKLLIHILPNVICWNLWKNRCAVKYGNKSSSI-HRVQYGIFKDVMQVIKIVFP 1055

Query: 745  KCNLPKHWPRLCSMVEKLKHPVICKKVGWKTPPIGWVKINTDGSFYAESGKASIGGLVRS 566
                   W +L ++VE  K       V W  P +G  K+NTDGS    SGK   GG++R 
Sbjct: 1056 SIPWQSSWNKLINIVEHCKQQYKIVLVSWNKPGLGTYKLNTDGSALQNSGKIGGGGILRD 1115

Query: 565  EAGNLIMAFAAPANCDSNNMTEATAGKYGVNWCVANGYNQFILELDSLLIDNMLLRRDTG 386
              G ++ AF+ P    +NN+ E  A  YG+ WC  +GY +  LE+DS L+ N +  +   
Sbjct: 1116 HQGKIVYAFSLPFGFGTNNIAEIKAALYGLEWCDQHGYKRVELEVDSQLLCNWIKNKTNI 1175

Query: 385  NSKLRDIIDTILQMLDH-ANYEVKRCYREANQIADGLAKLGANSNGLSLFHQHRFLPTYL 209
                 D+I  I Q+      ++    YREAN  AD L+K    S+ L L  QH +    L
Sbjct: 1176 PWIYEDLIQQIKQITRKIEQFQCHHIYREANITADLLSKW---SHSLELV-QHFYTKRQL 1231

Query: 208  KG 203
            +G
Sbjct: 1232 EG 1233


>ref|XP_006367184.1| PREDICTED: uncharacterized protein LOC102601483 [Solanum tuberosum]
          Length = 2019

 Score =  238 bits (607), Expect = 5e-60
 Identities = 129/399 (32%), Positives = 208/399 (52%), Gaps = 5/399 (1%)
 Frame = -2

Query: 1453 LSNYFDLVPKSRKITVNDFIEGRQWNERKLNDILPEGTVQEITAVNIGKENQKDYIIWKS 1274
            L++Y     +    +V++FIE   WN  K+  + P                     +WK 
Sbjct: 825  LAHYTSNSNRFNNDSVSEFIEEGHWNIPKVLRVAPPSQA-----------------VWKL 867

Query: 1273 SMDGNFTNKTAWQNIRKKYPKNKFLSHVWNNKIPFKTSFLTWRMLKRKLPFDEQLSRFGI 1094
            +  G F+  +AW +IR+K    K   + W+ KIPFK SFL WR ++ KLP +E+L  FGI
Sbjct: 868  NSSGLFSVSSAWNSIREKREITKINKYTWHPKIPFKCSFLLWRAIRGKLPTNEKLLSFGI 927

Query: 1093 NLDITCKCCTNSNQESLEHVFVQGQVARLL*RYFGAALGIQP*MIDIKSTLITWWRTNTS 914
                 C CC +   +++EH    G  A+ + +YF  +LGI+   + +++ ++ WW    +
Sbjct: 928  EPS-DCHCCHSPGIDTIEHTLNSGDFAKNVWKYFAISLGIRTDFLPLRNMIMRWWSAPHN 986

Query: 913  NEFHKLLIHITPIMICWEIWKNTSACKYGDERKFWPKKMQHQINWNLNREVEFAFPKCNL 734
            NE HKL++H TPI ICW +WKN  A KYG ++    + ++H +  +  + +   FP  + 
Sbjct: 987  NEAHKLILHSTPIFICWNLWKNRCAVKYGGKQSNIAR-VKHLVILDNFKLLHTVFPYISW 1045

Query: 733  PKHWPRLCSMVEKLKHPVICKKVGWKTPPIGWVKINTDGSFYAESGKASIGGLVRSEAGN 554
            P  W + C+++E          V W  PP  WVK+NTDGS  +  G    G ++R+  G 
Sbjct: 1046 PLRWNKFCNVIENCSQDTKVTAVQWTKPPYRWVKLNTDGSALSNPGSIGAGDVIRNHLGE 1105

Query: 553  LIMAFAAPANCDSNNMTEATAGKYGVNWCVANGYNQFILELDS-LLID----NMLLRRDT 389
            +I+A++ P    +NN  E  A  +G+ WC+   YNQ ILE+DS LL+D    N L+  + 
Sbjct: 1106 IILAYSTPLGTGTNNQAEVEAAIFGIAWCIHMKYNQVILEVDSQLLVDWFKNNKLIPWNI 1165

Query: 388  GNSKLRDIIDTILQMLDHANYEVKRCYREANQIADGLAK 272
             +   +  +  +   LDH  ++    +REAN +AD L+K
Sbjct: 1166 SSQMQQ--LHQLATQLDH--FKCIHTFREANFVADVLSK 1200



 Score =  186 bits (472), Expect = 2e-44
 Identities = 102/283 (36%), Positives = 148/283 (52%), Gaps = 2/283 (0%)
 Frame = -2

Query: 1411 TVNDFIEGRQWNERKLNDILPEGTVQEITAVNIGKENQ-KDYIIWKSSMDGNFTNKTAWQ 1235
            TV +F+   QWN  KL    P   +  I +     + +  +  IWK + DGNFT  +AW 
Sbjct: 524  TVAEFLVEGQWNVNKLIQQAPNDYLANILSTKFYVQQEIPNQAIWKLNSDGNFTYSSAWN 583

Query: 1234 NIRKKYPKNKFLSHVWNNKIPFKTSFLTWRMLKRKLPFDEQLSRFGINLDITCKCCTN-S 1058
             IR+K  K  F + +W+  IPFKTSFL WR L+ KLP +E+L  FG N    C CC N S
Sbjct: 584  AIREKRTKTIFNTFIWHKSIPFKTSFLLWRTLRGKLPTNEKLISFG-NEPANCFCCCNRS 642

Query: 1057 NQESLEHVFVQGQVARLL*RYFGAALGIQP*MIDIKSTLITWWRTNTSNEFHKLLIHITP 878
              +++EH F +GQ A  L + F AA GI      +   ++ WW T  +N  ++L++  TP
Sbjct: 643  GLDTIEHTFNKGQFATYLWKSFAAAAGIITYHNSLPQLIMQWWSTKHNNAAYRLILQATP 702

Query: 877  IMICWEIWKNTSACKYGDERKFWPKKMQHQINWNLNREVEFAFPKCNLPKHWPRLCSMVE 698
            I ICW +WKN  A KYG ++     ++++ I  +  + +   FP+   P +W  L  + E
Sbjct: 703  IFICWNLWKNRCASKYGGKQSN-ISRVKYAIYKDNYKLMTTTFPQIKWPSNWMELLQLGE 761

Query: 697  KLKHPVICKKVGWKTPPIGWVKINTDGSFYAESGKASIGGLVR 569
            +  H      V W  P   WVKINTDGS     G+   G  ++
Sbjct: 762  RCTHDTKVTMVKWIKPKKQWVKINTDGSALCNPGRIGAGSNIQ 804


>ref|XP_004253405.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 375

 Score =  236 bits (601), Expect = 2e-59
 Identities = 125/375 (33%), Positives = 194/375 (51%), Gaps = 1/375 (0%)
 Frame = -2

Query: 1309 KENQKDYIIWKSSMDGNFTNKTAWQNIRKKYPKNKFLSHVWNNKIPFKTSFLTWRMLKRK 1130
            ++ Q D  IWK S +G FT  TAW+ +R K  K+KF S +W+N IPFK+SFL WR+LK K
Sbjct: 8    QQQQHDQAIWKLSSNGCFTCSTAWEEVRNKKAKHKFNSLLWHNFIPFKSSFLLWRVLKGK 67

Query: 1129 LPFDEQLSRFGINLDITCKCCTN-SNQESLEHVFVQGQVARLL*RYFGAALGIQP*MIDI 953
            LP +E+LS F I    +C CC + +  +S+EH F  G  A  + R F    G+Q     +
Sbjct: 68   LPTNEKLSNFSIEPS-SCFCCVDRTRMDSIEHTFNSGSFATKVWRAFTTTAGLQEDQSSV 126

Query: 952  KSTLITWWRTNTSNEFHKLLIHITPIMICWEIWKNTSACKYGDERKFWPKKMQHQINWNL 773
            ++ L  WW     N  H+LL+   PI I W +WKN  ACKYG  +     ++++ +  + 
Sbjct: 127  QARLRQWWTARPRNASHQLLLQAMPIFIVWNLWKNRCACKYGG-KSTNISRVKYAVYKDT 185

Query: 772  NREVEFAFPKCNLPKHWPRLCSMVEKLKHPVICKKVGWKTPPIGWVKINTDGSFYAESGK 593
             + ++ AFP+ N P +W  L    E+ KH +      W  PP  W+KINTDGS    +G 
Sbjct: 186  FKMLKIAFPRVNWPGNWAALIQTAERCKHEIKVCMTTWNRPPEQWIKINTDGSALINTGH 245

Query: 592  ASIGGLVRSEAGNLIMAFAAPANCDSNNMTEATAGKYGVNWCVANGYNQFILELDSLLID 413
               GG++R + G +++AFA P    +NN  EA A  +G++W +  G+   ++ELDS L+ 
Sbjct: 246  CGAGGIIRDKEGKMVLAFATPLGDGTNNKAEAEAALFGLSWALELGHRNILIELDSQLVV 305

Query: 412  NMLLRRDTGNSKLRDIIDTILQMLDHANYEVKRCYREANQIADGLAKLGANSNGLSLFHQ 233
            + + +++                             EAN +AD L+K         ++  
Sbjct: 306  HWISKKEPPIG------------------------MEANWVADALSKHSHTIATPQVYFN 341

Query: 232  HRFLPTYLKGTFQLD 188
            +  LP   +  +Q+D
Sbjct: 342  NSQLPREAQAYYQMD 356


>ref|XP_004228797.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 389

 Score =  230 bits (586), Expect = 1e-57
 Identities = 124/376 (32%), Positives = 202/376 (53%), Gaps = 1/376 (0%)
 Frame = -2

Query: 1294 DYIIWKSSMDGNFTNKTAWQNIRKKYPKNKFLSHVWNNKIPFKTSFLTWRMLKRKLPFDE 1115
            D   W     G FT  +AW  IRKK   +   + VW+  +PFKTSF  WR L+ KLP +E
Sbjct: 3    DSAYWMPDDKGQFTIFSAWDIIRKKKDPDPIHNCVWHKNVPFKTSFFIWRALRSKLPTNE 62

Query: 1114 QLSRFGINLDITCKCCTNSNQESLEHVFVQGQVARLL*RYFGAALGIQP*MIDIKSTLIT 935
             L +FG   ++ C CC    ++ L+H+ + G  A+ + +     LGI     +++STL++
Sbjct: 63   NLLKFGKE-ELECYCCYRKGKDDLKHILITGNFAKYIWKIHTKRLGIAIVNTNLRSTLLS 121

Query: 934  WWRTNTSNEFHKLLIHITPIMICWEIWKNTSACKYGDERKFWPKKMQHQINWNLNREVEF 755
            W R  + NE HKL++HI P +ICW +WKN  + KYG++      +++  I  ++ + ++ 
Sbjct: 122  WRRLTSYNEVHKLILHILPNIICWNLWKNRCSAKYGNKPSSI-YRVESGIFKDIMQIIKA 180

Query: 754  AFPKCNLPKHWPRLCSMVEKLKHPVICKKVGWKTPPIGWVKINTDGSFYAESGKASIGGL 575
             +P       W RL ++VE+ +  +    V W+ PP G  K+NTDGS    +GK   GG+
Sbjct: 181  VYPNIPWQSSWERLFNLVEQCQQHLKVTMVNWERPPEGIHKLNTDGSAKHNTGKIGGGGI 240

Query: 574  VRSEAGNLIMAFAAPANCDSNNMTEATAGKYGVNWCVANGYNQFILELDSLLIDNMLLRR 395
            +R   G LI AFA P    +NN  E  A  +G+ WC  +G+ + ILE+DS L+   ++ +
Sbjct: 241  LRDHQGKLIYAFAIPLGFGTNNFAEIQAALHGLQWCQQHGFEKIILEVDSELLHKWIINK 300

Query: 394  DTGNSKLRDIIDTILQMLDHAN-YEVKRCYREANQIADGLAKLGANSNGLSLFHQHRFLP 218
             +   +    I  I  + +    ++ K  YREAN  AD LAK   + + +  F+  + L 
Sbjct: 301  SSVPWRCLHYIQQIQNISNKMEVFQCKHIYREANGTADLLAKWSHSMDIIQQFYTSQQLE 360

Query: 217  TYLKGTFQLDRCQLVL 170
              +KG++ L++  + L
Sbjct: 361  GVIKGSYILEKMGMQL 376


>ref|XP_004253275.1| PREDICTED: uncharacterized protein LOC101268853 [Solanum
            lycopersicum]
          Length = 1333

 Score =  227 bits (579), Expect = 9e-57
 Identities = 131/417 (31%), Positives = 208/417 (49%), Gaps = 9/417 (2%)
 Frame = -2

Query: 1408 VNDFIEGRQWNE----RKLNDILPEGTVQEITAVNIGKENQKDYIIWKSSMDGNFTNKTA 1241
            V DF++  +WNE    +++  +L    +Q+      GK+   D   W  +  G F+  +A
Sbjct: 908  VADFLKDGKWNESLIRQQVTPLLVPKILQKQFNFTAGKD---DTATWMPTETGIFSIASA 964

Query: 1240 WQNIRKKYPKNKFLSHVWNNKIPFKTSFLTWRMLKRKLPFDEQLSRFGINLDITCKCCTN 1061
            W+ IRKK   +   + +W+  +PFK +F  WR LK KLP +E L R G ++     CC  
Sbjct: 965  WECIRKKRIIDNISTIIWHKHLPFKIAFFIWRALKGKLPTNEFLQRIGSDIS-DYSCCYR 1023

Query: 1060 SNQESLEHVFVQGQVARLL*RYFGAALGIQP*MIDIKSTLITWWRTNTSNEFHKLLIHIT 881
              ++ + H+ + G  A+ + +   A LGI P    +++ L+ W     +NE HKLLIHI 
Sbjct: 1024 KGKDDINHILINGNFAKYIWKIHAATLGIIPVNTTLRAQLLHWRNQQVNNEVHKLLIHIL 1083

Query: 880  PIMICWEIWKNTSACKYGDERKFWPKKMQHQINWNLNREV----EFAFPKCNLPKHWPRL 713
            P +ICW +WKN  A KYG +R        H++ + + +EV    +  FP      +W  L
Sbjct: 1084 PNIICWNLWKNRCAVKYGKKRS-----SIHRVKYGIFKEVMQVIKLVFPSIPWQSNWNNL 1138

Query: 712  CSMVEKLKHPVICKKVGWKTPPIGWVKINTDGSFYAESGKASIGGLVRSEAGNLIMAFAA 533
             +++E          V W  P +G  K+NTDGS    SGK   GG +R   G ++ AF+ 
Sbjct: 1139 VNIIEHCSQQYKIVLVSWNKPALGTYKLNTDGSAIQNSGKIGGGGNLRDFQGKIVYAFSI 1198

Query: 532  PANCDSNNMTEATAGKYGVNWCVANGYNQFILELDSLLIDNMLLRRDTGNSKLRDIIDTI 353
            P    +NN  E  A  YG+ WC  +GY +  LE++S L+ N +        +  D++  I
Sbjct: 1199 PFGVGTNNFAEIKAALYGMEWCEQHGYKKVELEVNSELLYNWIKNTTKIPWRYEDLVQQI 1258

Query: 352  LQM-LDHANYEVKRCYREANQIADGLAKLGANSNGLSLFHQHRFLPTYLKGTFQLDR 185
             Q+ +    +     YREAN  AD L+K   N   +  F+  R L   +KG++ L++
Sbjct: 1259 QQISMKMEQFHCHHIYREANNTADLLSKWSNNCEIVQHFYTTRQLEGAIKGSYILEK 1315


>ref|XP_004244918.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 1010

 Score =  227 bits (579), Expect = 9e-57
 Identities = 132/429 (30%), Positives = 213/429 (49%), Gaps = 5/429 (1%)
 Frame = -2

Query: 1456 ALSNYFDLVPKSRKITVNDFIEGRQWNERKLNDILPEGTVQEITAVNIGKENQK-DYIIW 1280
            A++   D +     + + +  E  +W ER++  ++P   V  I    I  +N+K DY IW
Sbjct: 569  AVATKCDNISSLNNVKIAELTENGKWKERQVRQLVPPLLVPNILDTVIQAKNEKSDYAIW 628

Query: 1279 KSSMDGNFTNKTAWQNIRKKYPKNKFLSHVWNNKIPFKTSFLTWRMLKRKLPFDEQLSRF 1100
                 G FT  +AW  IRKK   +     +W+  IPFK SF  W+ L+ KLP ++ L  F
Sbjct: 629  TLEDKGKFTIHSAWNIIRKKNISDPINQFIWHKNIPFKVSFFIWKALRNKLPTNDSLMNF 688

Query: 1099 GINLDITCKCCTNSNQESLEHVFVQGQVARLL*RYFGAALGIQP*MIDIKSTLITWWRTN 920
            G++ +  C CC    ++ + H+ + G  A+ + +     LG+     +++S L+ W    
Sbjct: 689  GMD-EQECYCCFRKGKDDILHILITGNFAKYIWKIHATRLGVHQDHANLRSLLLHWRNIP 747

Query: 919  TSNEFHKLLIHITPIMICWEIWKNTSACKYGDERKFWPKKMQHQINWNLNREVEFAFPKC 740
              N+  KLL  I P  ICW +WKN  A K+G  ++   +++Q+ I  +  + V  AFP  
Sbjct: 748  VHNQVQKLLYQILPNFICWNLWKNRCAVKHGS-KQCSTQRVQYAIFKDTMQAVMVAFPNI 806

Query: 739  NLPKHWPRLCSMVEKLKHPVICKKVGWKTPPIGWVKINTDGSFYAESGKASIGGLVRSEA 560
            +   +   L ++ E  +  V   KV W+ P +G  K+NTDGS      K   GG++R   
Sbjct: 807  SRQNNLDMLINLAENCQQQVKVTKVMWEKPSLGIFKLNTDGSAIHNINKIGGGGILRDHN 866

Query: 559  GNLIMAFAAPANCDSNNMTEATAGKYGVNWCVANGYNQFILELDSLLIDNMLLRRDTGNS 380
            G LI AFA P    +NN  E  A  YG++WC  +GY + ILE+DS L+   +   D   +
Sbjct: 867  GKLIYAFAIPFGIGTNNFAEMKAALYGLSWCEQHGYKRIILEVDSELLSKWI---DNSIN 923

Query: 379  KLRDIIDTILQMLDHAN----YEVKRCYREANQIADGLAKLGANSNGLSLFHQHRFLPTY 212
                   TI Q+ D  N    ++ +  +REAN  AD LAK     + +  F+  + L   
Sbjct: 924  IPWRCQPTIYQIQDIVNKMEYFQCQHIFREANGTADLLAKWSHQQDIVQHFYTQQQLIGT 983

Query: 211  LKGTFQLDR 185
            ++G + L++
Sbjct: 984  IRGNYLLEK 992


>ref|XP_004253338.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 655

 Score =  222 bits (565), Expect = 4e-55
 Identities = 121/368 (32%), Positives = 184/368 (50%), Gaps = 13/368 (3%)
 Frame = -2

Query: 1408 VNDFIEGRQWNERKLNDILPEGTVQEITAVNIGKENQK---------DYIIWKSSMDGNF 1256
            V DF++  +WNE  +         Q++T + + K  QK         D  IW  +  G F
Sbjct: 290  VADFLKDGKWNESLIR--------QQVTPLLVPKILQKQFNYIAGKDDTAIWMPTETGIF 341

Query: 1255 TNKTAWQNIRKKYPKNKFLSHVWNNKIPFKTSFLTWRMLKRKLPFDEQLSRFGINLDITC 1076
            +  +AW+ IRKK   +   + +WN  +PFK +F  WR LK KLP +E L R G N+   C
Sbjct: 342  SISSAWECIRKKRIIDNISTIIWNKHLPFKIAFFIWRALKGKLPTNEFLQRIGSNIS-DC 400

Query: 1075 KCCTNSNQESLEHVFVQGQVARLL*RYFGAALGIQP*MIDIKSTLITWWRTNTSNEFHKL 896
             CC    ++ + H+ + G  A+ + +   A LGI P   ++++ L+ W     +NE HKL
Sbjct: 401  SCCYRKGKDDINHILINGNFAKYIWKIHAATLGIIPVNTNLRAQLLHWRNQKVNNEVHKL 460

Query: 895  LIHITPIMICWEIWKNTSACKYGDERKFWPKKMQHQINWNLNREV----EFAFPKCNLPK 728
            LIHI P +ICW +WKN  A KYG +R        H++ + + +EV    +  FP      
Sbjct: 461  LIHILPNLICWNLWKNRCAVKYGKKRS-----NVHRVKYGIFKEVMQIIKLVFPSIPWQA 515

Query: 727  HWPRLCSMVEKLKHPVICKKVGWKTPPIGWVKINTDGSFYAESGKASIGGLVRSEAGNLI 548
            +W  L +++E          V W  P  G  K+NTDGS    SGK   GG++R   G ++
Sbjct: 516  NWNNLVNIIENCSQQYKIVLVSWNKPAFGTYKLNTDGSAIQNSGKTGGGGILRDFQGKIV 575

Query: 547  MAFAAPANCDSNNMTEATAGKYGVNWCVANGYNQFILELDSLLIDNMLLRRDTGNSKLRD 368
             AF+ P    +NN  E  A  YG+ WC  +GY +  LE+DS L+ N +        +  D
Sbjct: 576  YAFSIPFGVGTNNFAEIKAALYGMQWCEQHGYKKVELEVDSELLFNWIKNTTKIPWRYED 635

Query: 367  IIDTILQM 344
            ++  I Q+
Sbjct: 636  LVQQIQQI 643


>ref|XP_004237273.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 601

 Score =  209 bits (533), Expect = 2e-51
 Identities = 126/429 (29%), Positives = 212/429 (49%), Gaps = 5/429 (1%)
 Frame = -2

Query: 1456 ALSNYFDLVPKSRKITVNDFIEGRQWNERKLNDILPEGTV----QEITAVNIGKENQKDY 1289
            +L+N+ D +    K  ++DF    +WNE  +   +P   +    Q +   N GKE   D 
Sbjct: 160  SLANHCDHISSLNKSRLDDFWIDGKWNESLIRQHVPPLLIPIILQTLFNYNEGKE---DT 216

Query: 1288 IIWKSSMDGNFTNKTAWQNIRKKYPKNKFLSHVWNNKIPFKTSFLTWRMLKRKLPFDEQL 1109
             IW       FT  +AW+ IRKK   +   + +W+  IPFK SF  W  L  KLP +E L
Sbjct: 217  AIWIPDETVKFTISSAWKVIRKKRSHDPINNIIWHKHIPFKISFFIWGALTGKLPTNEIL 276

Query: 1108 SRFGINLDITCKCCTNSNQESLEHVFVQGQVARLL*RYFGAALGIQP*MIDIKSTLITWW 929
             R G ++ + C CC +  ++ + H+ + G  A  + +   + +G      +++S L+ W 
Sbjct: 277  QRLGRDI-VDCYCCYSKVKDDINHILLTGNFANYIWKKHASTVGALHVNTNMRSQLLYWR 335

Query: 928  RTNTSNEFHKLLIHITPIMICWEIWKNTSACKYGDERKFWPKKMQHQINWNLNREVEFAF 749
               T+NE HKLLIH  P +ICW +W+N  A KYG ++     ++Q+ I  +  + ++  +
Sbjct: 336  SLQTNNEVHKLLIHTLPNIICWNLWENRCAVKYGGKQSSI-YRVQYGIFKDTMQIIKLEY 394

Query: 748  PKCNLPKHWPRLCSMVEKLKHPVICKKVGWKTPPIGWVKINTDGSFYAESGKASIGGLVR 569
                    W  L + +++ +       V W  P IG  K+NTDGS   E+G    GG++R
Sbjct: 395  SNIPWQYSWGHLINFIDQCQQQYKIFMVRWIKPTIGRYKLNTDGSCLQENGNIEGGGILR 454

Query: 568  SEAGNLIMAFAAPANCDSNNMTEATAGKYGVNWCVANGYNQFILELDSLLIDNMLLRRDT 389
               G++I AFA+P    +NN+ +  A  YG+ WC  +GY   +LE+DS L+   +     
Sbjct: 455  DHQGSIIFAFASPFAFGTNNIAKLKAALYGLEWCEQHGYKDIVLEIDSELLSKWISNTIQ 514

Query: 388  GNSKLRDIIDTILQMLDHA-NYEVKRCYREANQIADGLAKLGANSNGLSLFHQHRFLPTY 212
               + +  +  I ++     +++ +  YRE N  AD LAK   N      F+  R     
Sbjct: 515  IPWRCQQYVQHIHEITKKLHHFQCQHIYREENSTADLLAKWSHNIEIPQDFYTTRQFKGT 574

Query: 211  LKGTFQLDR 185
            ++G++ L++
Sbjct: 575  IRGSYILEK 583


>ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            tuberosum]
          Length = 1035

 Score =  200 bits (509), Expect = 1e-48
 Identities = 123/423 (29%), Positives = 210/423 (49%), Gaps = 4/423 (0%)
 Frame = -2

Query: 1426 KSRKITVNDFIEGRQWNERKLNDILPEGTVQEITAVNIGKENQKDYII---WKSSMDGNF 1256
            +  ++ V  FI    W+E KL D+L E  V+ I  +NI  +  ++ I    W  ++ G F
Sbjct: 416  QEEELEVQYFITNDGWDETKLKDLLSEEMVEHII-LNIRPKTSEEGIDKAWWCGNLTGLF 474

Query: 1255 TNKTAWQNIRKKYPKNKFLSHVWNNKIPFKTSFLTWRMLKRKLPFDEQLSRFGINLDITC 1076
            T K+A+  IR +  + ++  ++W   +P K SF  WR+ +RK+   + L R  I +   C
Sbjct: 475  TVKSAYHRIRGRKEEEEWRRYMWIKGMPIKISFFLWRVWRRKIATYDNLKRMKIPVVSKC 534

Query: 1075 KCCTNSNQESLEHVFVQGQVARLL*RYFGAALGIQP*MIDIKSTLITWWRTNTSNEFHKL 896
             CC     E++ H+ +   +A+ L + F +  GI    ++++  +  WW    SN+  ++
Sbjct: 535  YCCKEGEMETMTHLLLTAPIAQKLWKQFASYAGIIINGLNLQQLIFKWWDYKASNKLSQI 594

Query: 895  LIHITPIMICWEIWKNTSACKYGDERKFWPKKMQHQINWNLNREVEFAFPKCN-LPKHWP 719
            L  +  + I WE+WK  ++ ++G E  +    M +Q    L + V   FP    L  HWP
Sbjct: 595  LKAVLAV-IMWELWKRRNSYRHGKETTY--NNMYYQCQLILYQLVTIKFPWIKGLTYHWP 651

Query: 718  RLCSMVEKLKHPVICKKVGWKTPPIGWVKINTDGSFYAESGKASIGGLVRSEAGNLIMAF 539
            ++  M++  K P+  K V W+ P  GWV  NTDG+       +S G  +R + G+L+ A 
Sbjct: 652  QVVGMLQNYKPPLHYKVVRWRKPSEGWVTCNTDGASKGNPRMSSYGYCIRDKNGDLLYAE 711

Query: 538  AAPANCDSNNMTEATAGKYGVNWCVANGYNQFILELDSLLIDNMLLRRDTGNSKLRDIID 359
            A      +N   EAT     + +C  NG  +  LE DSL + NM+ R      +L + ++
Sbjct: 712  AHNIGETTNMEAEATTVWKALQFCYENGLRKVRLETDSLALQNMITRSWKIPWELVEKLE 771

Query: 358  TILQMLDHANYEVKRCYREANQIADGLAKLGANSNGLSLFHQHRFLPTYLKGTFQLDRCQ 179
             I +++   + +V   YRE NQ+AD +A    N+    +FH    LP+  K    +D+ Q
Sbjct: 772  EIHEIMQQIDVQVCHVYREVNQLADFIANTTINTEHKKVFHHFHQLPSLGKKLLNIDKHQ 831

Query: 178  LVL 170
             +L
Sbjct: 832  ELL 834


>ref|XP_004243111.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 927

 Score =  192 bits (488), Expect = 3e-46
 Identities = 126/423 (29%), Positives = 195/423 (46%), Gaps = 2/423 (0%)
 Frame = -2

Query: 1456 ALSNYFDLVPKSRKITVNDFIEGRQWNERKLNDILPEGTVQEITAVNIG-KENQKDYIIW 1280
            A++N  + +       V D++   +WNE  +   +P   V  I   NI  KE+  D  IW
Sbjct: 523  AMANECENISSLNNREVRDYLTDGRWNESLVRQHVPAQLVLNILQTNINYKEDTADSAIW 582

Query: 1279 KSSMDGNFTNKTAWQNIRKKYPKNKFLSHVWNNKIPFKTSFLTWRMLKRKLPFDEQLSRF 1100
               + GNF+  +AW+ IRKK+ K+     VWN +IPFK SF  WR L+ K+P +E L +F
Sbjct: 583  IPVVSGNFSISSAWEIIRKKHNKDPINKIVWNKQIPFKVSFFIWRALRGKIPTNESLLKF 642

Query: 1099 GINLDITCKCCTNSNQESLEHVFVQGQVARLL*RYFGAALGIQP*MIDIKSTLITWWRTN 920
            G    + C CC    ++ + H+ V G  A+ + +Y  +++G+      ++S LI      
Sbjct: 643  G-REGVDCYCCYKKWKDEISHILVTGNFAKHIWKYHASSVGVIQANTTLRSQLI------ 695

Query: 919  TSNEFHKLLIHITPIMICWEIWKNTSACKYGDERKFWPKKMQHQINWNLNREVEFAFPKC 740
                                      A KYG ++    +K+++ I+    + ++  FP  
Sbjct: 696  ------------------------QCAVKYGGKQSS-IQKVKYGISKETMQVIKLTFPNI 730

Query: 739  NLPKHWPRLCSMVEKLKHPVICKKVGWKTPPIGWVKINTDGSFYAESGKASIGGLVRSEA 560
                +W  L ++VE+ K       V W  P     K+NT+GS  AESGK   GG++R   
Sbjct: 731  PWQSNWESLINIVEQCKQLYKVNMVRWIKPKQHVYKLNTNGSALAESGKIGGGGVLRHHQ 790

Query: 559  GNLIMAFAAPANCDSNNMTEATAGKYGVNWCVANGYNQFILELDSLLIDNMLLRRDTGNS 380
            G LI AF+ P    + N  E  A  +G++WC  +GY    LE+DS +I   +        
Sbjct: 791  GKLICAFSVPLGVGTYNFAELKAATFGIDWCEQHGYKSIELEVDSEIICQWINNTIKPPW 850

Query: 379  KLRDIIDTILQMLDHANY-EVKRCYREANQIADGLAKLGANSNGLSLFHQHRFLPTYLKG 203
            + +  +  +LQ      Y   K  YREAN  AD LAK     +      QH + P  LKG
Sbjct: 851  RCQHNVQQLLQTTSKFQYFHCKHIYREANNTADLLAKWSHTMD----IPQHFYTPQQLKG 906

Query: 202  TFQ 194
            T +
Sbjct: 907  TIR 909


>ref|XP_004253445.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 338

 Score =  189 bits (479), Expect = 3e-45
 Identities = 102/321 (31%), Positives = 166/321 (51%), Gaps = 2/321 (0%)
 Frame = -2

Query: 1144 MLKRKLPFDEQLSRFGINLDITCKCCTN-SNQESLEHVFVQGQVARLL*RYFGAALGIQP 968
            MLK KLP +E+L+ FGI     C CC + +  ++++H F  G  A  + + F A  G+Q 
Sbjct: 1    MLKGKLPTNEKLTNFGIEPS-PCFCCFDRAGMDTIDHTFNSGPFAAGVWKAFTAGAGLQA 59

Query: 967  *MIDIKSTLITWWRTNTSNEFHKLLIHITPIMICWEIWKNTSACKYGDERKFWPKKMQHQ 788
                +++ L  WW     NE H+LL+  TP+ I W +WKN  ACKYG        ++++ 
Sbjct: 60   DRTPLQAKLRQWWTARPRNEGHQLLLQATPVFIVWNLWKNICACKYGGTSTNI-SRVKYA 118

Query: 787  INWNLNREVEFAFPKCNLPKHWPRLCSMVEKLKHPVICKKVGWKTPPIGWVKINTDGSFY 608
            +  +  + ++ AFP  N P  W  L    E  KH +    V W  P   W+KINTDGS  
Sbjct: 119  VYKDTFKMLKMAFPHINWPGSWAALVQKAENCKHEIQVSMVTWNRPSEQWIKINTDGSAL 178

Query: 607  AESGKASIGGLVRSEAGNLIMAFAAPANCDSNNMTEATAGKYGVNWCVANGYNQFILELD 428
               G+   GG++R + G ++MAFA P    +NN  EA A  +G++W +  G+    +ELD
Sbjct: 179  TNPGQTGAGGILRDKEGKMVMAFATPLGEGTNNTAEAEAVLFGLSWALELGHRNIQIELD 238

Query: 427  SLLIDNMLLRRDTGNSKLRDIIDTILQM-LDHANYEVKRCYREANQIADGLAKLGANSNG 251
            + L+   + R++  +  + + I+ I  + +   N+     +REAN +AD L+K   N   
Sbjct: 239  AQLVVKWITRKEVPHWSVINQIERIQHLIMQTQNFMCTHIFREANWVADALSKHSHNIPA 298

Query: 250  LSLFHQHRFLPTYLKGTFQLD 188
              ++  +  LP   +  +Q+D
Sbjct: 299  PQVYFSNNQLPREAQAYYQMD 319


>ref|XP_004233579.1| PREDICTED: uncharacterized protein LOC101260201 [Solanum
            lycopersicum]
          Length = 1531

 Score =  188 bits (478), Expect = 4e-45
 Identities = 96/274 (35%), Positives = 145/274 (52%)
 Frame = -2

Query: 1246 TAWQNIRKKYPKNKFLSHVWNNKIPFKTSFLTWRMLKRKLPFDEQLSRFGINLDITCKCC 1067
            +AW+ IRKK   N   + +W+N+IPFK +F  WR L+ KLP +E + RFGI  +  C CC
Sbjct: 1260 SAWEVIRKKKSVNPINNIIWHNQIPFKVAFFIWRALRGKLPTNEGVHRFGIAAE-DCYCC 1318

Query: 1066 TNSNQESLEHVFVQGQVARLL*RYFGAALGIQP*MIDIKSTLITWWRTNTSNEFHKLLIH 887
                ++ + H+ +    A  + +Y  A LG+     +I+S L+ W   +T NE HKL++ 
Sbjct: 1319 YQQGKDDINHILLTRNFANYIWKYHAAILGVTQLYTNIRSQLMHWRNQHTINEVHKLIMQ 1378

Query: 886  ITPIMICWEIWKNTSACKYGDERKFWPKKMQHQINWNLNREVEFAFPKCNLPKHWPRLCS 707
            I P  ICW +WKN    KYG +     K++Q+ I  ++ + +   +P          L  
Sbjct: 1379 ILPNYICWNLWKNRCGVKYGHKTSSI-KRVQYGIFKDIMQVIRLVYPIIPWQSSLYHLIK 1437

Query: 706  MVEKLKHPVICKKVGWKTPPIGWVKINTDGSFYAESGKASIGGLVRSEAGNLIMAFAAPA 527
              E          V W+ P  G  K+NTDGS   ++GK   GG++R   G +I AF+ P 
Sbjct: 1438 TAEHCHQQYKIIMVSWQKPKEGIYKLNTDGSAIQDTGKIGGGGILRDHTGKIIYAFSVPL 1497

Query: 526  NCDSNNMTEATAGKYGVNWCVANGYNQFILELDS 425
            +  +NNM E  A  YG+ WC  +GY +  LE+DS
Sbjct: 1498 DFGTNNMAELKAAAYGLEWCQQHGYKRIALEVDS 1531


>ref|XP_004248946.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 622

 Score =  186 bits (473), Expect = 2e-44
 Identities = 113/327 (34%), Positives = 157/327 (48%), Gaps = 2/327 (0%)
 Frame = -2

Query: 1408 VNDFIEGRQWNERKLNDILPEGTVQEITAVNIGKENQK-DYIIWKSSMDGNFTNKTAWQN 1232
            V +F E  +W  RKL    P   +  I A  I ++  + D  IWK ++ G F  K+AW  
Sbjct: 290  VANFWENGEWKWRKLVRHAPITHLSSILATRIPQQQHRPDQAIWKLNIHGRFDCKSAWDE 349

Query: 1231 IRKKYPKNKFLSHVWNNKIPFKTSFLTWRMLKRKLPFDEQLSRFGINLDITCKCC-TNSN 1055
            IR K  KN F S +W+  IPFKTSFL WR LK KLP +E+LS FGI   + C CC     
Sbjct: 350  IRNKKAKNFFNSALWHKFIPFKTSFLLWRTLKGKLPTNEKLSNFGIE-PLPCFCCFDRGG 408

Query: 1054 QESLEHVFVQGQVARLL*RYFGAALGIQP*MIDIKSTLITWWRTNTSNEFHKLLIHITPI 875
             +++EH+F  G  A ++  +F A  GIQ     + + +  WW    +N  HKLL+  TPI
Sbjct: 409  MDTIEHIFNSGPFATIVWNFFAATAGIQADHSTLPALIKQWWTAKPNNAGHKLLLQATPI 468

Query: 874  MICWEIWKNTSACKYGDERKFWPKKMQHQINWNLNREVEFAFPKCNLPKHWPRLCSMVEK 695
             ICW +WKN  ACKYG +              N++R V++A  K              + 
Sbjct: 469  FICWNLWKNRCACKYGGK------------GTNISR-VKYAIYK-----------DTFKM 504

Query: 694  LKHPVICKKVGWKTPPIGWVKINTDGSFYAESGKASIGGLVRSEAGNLIMAFAAPANCDS 515
            LK+                     +GS     GK   GG++R + G +IMAF+ P    S
Sbjct: 505  LKNAF------------------PNGSALTNEGKIGAGGIIRDKEGKMIMAFSTPLGEGS 546

Query: 514  NNMTEATAGKYGVNWCVANGYNQFILE 434
            NN  E  A  +G+ W    G+   +LE
Sbjct: 547  NNQAEIEAALFGLTWAFELGFKNILLE 573