BLASTX nr result

ID: Atropa21_contig00039113 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00039113
         (568 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006346978.1| PREDICTED: RNA pseudouridine synthase 5-like...    57   3e-06
ref|XP_006346977.1| PREDICTED: RNA pseudouridine synthase 5-like...    57   3e-06
ref|XP_006346975.1| PREDICTED: RNA pseudouridine synthase 5-like...    57   3e-06
ref|XP_004233537.1| PREDICTED: RNA pseudourine synthase 5-like [...    57   3e-06

>ref|XP_006346978.1| PREDICTED: RNA pseudouridine synthase 5-like isoform X4 [Solanum
           tuberosum]
          Length = 349

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 25/31 (80%), Positives = 25/31 (80%)
 Frame = -1

Query: 535 YILPGDPLYVSGGQPKCLHPELTGEGFEKDG 443
           Y L GDPLYVSGGQPKC HPEL  E FEKDG
Sbjct: 267 YPLIGDPLYVSGGQPKCFHPELMDESFEKDG 297


>ref|XP_006346977.1| PREDICTED: RNA pseudouridine synthase 5-like isoform X3 [Solanum
           tuberosum]
          Length = 374

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 25/31 (80%), Positives = 25/31 (80%)
 Frame = -1

Query: 535 YILPGDPLYVSGGQPKCLHPELTGEGFEKDG 443
           Y L GDPLYVSGGQPKC HPEL  E FEKDG
Sbjct: 292 YPLIGDPLYVSGGQPKCFHPELMDESFEKDG 322


>ref|XP_006346975.1| PREDICTED: RNA pseudouridine synthase 5-like isoform X1 [Solanum
           tuberosum] gi|565360441|ref|XP_006346976.1| PREDICTED:
           RNA pseudouridine synthase 5-like isoform X2 [Solanum
           tuberosum]
          Length = 379

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 25/31 (80%), Positives = 25/31 (80%)
 Frame = -1

Query: 535 YILPGDPLYVSGGQPKCLHPELTGEGFEKDG 443
           Y L GDPLYVSGGQPKC HPEL  E FEKDG
Sbjct: 297 YPLIGDPLYVSGGQPKCFHPELMDESFEKDG 327


>ref|XP_004233537.1| PREDICTED: RNA pseudourine synthase 5-like [Solanum lycopersicum]
          Length = 402

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 25/31 (80%), Positives = 25/31 (80%)
 Frame = -1

Query: 535 YILPGDPLYVSGGQPKCLHPELTGEGFEKDG 443
           Y L GDPLYVSGGQPKC HPEL  E FEKDG
Sbjct: 315 YPLIGDPLYVSGGQPKCFHPELLDESFEKDG 345


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