BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00038897
         (1445 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004306074.1| PREDICTED: putative ribonuclease H protein A...   100   1e-32
gb|ABO80459.1| RNA-directed DNA polymerase (Reverse transcriptas...   117   6e-31
sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H pr...    98   8e-31
gb|AAC63844.1| putative non-LTR retroelement reverse transcripta...   103   8e-30
gb|AAD32950.1| putative non-LTR retroelement reverse transcripta...   113   1e-29
ref|XP_004289445.1| PREDICTED: putative ribonuclease H protein A...    87   3e-29
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]              96   1e-28
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]              96   1e-28
ref|XP_006577420.1| PREDICTED: putative ribonuclease H protein A...    91   1e-27
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]              92   2e-27
ref|XP_006582712.1| PREDICTED: putative ribonuclease H protein A...    90   4e-27
gb|ADK92871.1| retrotransposon protein [Hypericum perforatum]         104   8e-27
gb|AEL30350.1| RNA-directed DNA polymerase [Arachis hypogaea]         103   1e-26
ref|XP_006469117.1| PREDICTED: putative ribonuclease H protein A...    97   2e-26
ref|XP_006589908.1| PREDICTED: putative ribonuclease H protein A...    91   2e-26
emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga...   110   4e-26
ref|XP_003553268.2| PREDICTED: putative ribonuclease H protein A...    90   1e-25
emb|CAB78008.1| putative protein [Arabidopsis thaliana] gi|73210...    87   1e-25
ref|XP_002453810.1| hypothetical protein SORBIDRAFT_04g018371 [S...    91   1e-25
ref|XP_006588248.1| PREDICTED: putative ribonuclease H protein A...    86   1e-25

>ref|XP_004306074.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 407

 Score =  100 bits (249), Expect(2) = 1e-32
 Identities = 68/250 (27%), Positives = 111/250 (44%), Gaps = 6/250 (2%)
 Frame = -3

Query: 804 NLSLLTSLIWRL-KNNNNVWANVLSKKYL---CLRNQNLSNHKPSDSYIWKIISRTFPFF 637
           N ++L  + WR+ + +  +WA++ ++KYL   CL + N        S  W+ I       
Sbjct: 125 NQAMLAKISWRMFQCDKGLWASMFAEKYLKNCCLFDDNYEVAVDCSS-TWRGIIFGAKLL 183

Query: 636 ANGISWCEGLGNNINLWSDNWIEPSRSLREVIHGPLNSSDLN--LDVSNILANNEWDLSC 463
            + + W  G G +I  W D W         +I+  L S+ +N    V +    + WD+  
Sbjct: 184 RSNLKWRLGDGKSIKFWHDYWFPAG----PLINFALPSAFINHAATVCDFWIEDGWDVHK 239

Query: 462 LSFEFPQSILNSIRNTYTQSYNPKNDSYFWNYSSDGSFNTKSAYALYLSSLKPS*NSITS 283
           L    P  I+N I N         +D+  W  +++G F  KSAY        P    +  
Sbjct: 240 LLDVVPFEIVNKIVNVPIDFGVSGSDTLIWGATANGKFFVKSAYNSLFDMSAP----LNP 295

Query: 282 QFNWAWKIQATNRIKFFMWLLLNNKLPTAFSLFFRNIIPSKYCASCTNIEEDTCHIFVSC 103
           Q+N+ W+++   ++K F+W  L+ KL T      R    S  C  C + +E   H+F  C
Sbjct: 296 QWNYIWRMKIPPKLKTFLWTFLHKKLLTNMQRVTRGFTASALCPICQSADESFLHLFRDC 355

Query: 102 PDAVPIWNHF 73
           P +V IWN F
Sbjct: 356 PRSVLIWNAF 365



 Score = 68.2 bits (165), Expect(2) = 1e-32
 Identities = 34/70 (48%), Positives = 47/70 (67%), Gaps = 6/70 (8%)
 Frame = -1

Query: 1004 MSYIKSILASIPTYAISQTNR------NRIDRIQRNFLWGSTTNKKKIHLVNWDSVNMPK 843
            ++ I+S+ ++IP YA+ QT +        +D++ RNFLWG T  KKK+HLVNWD V  PK
Sbjct: 53   LTLIQSVSSAIPNYAM-QTAKFPVSLCENLDKLNRNFLWGDTEIKKKVHLVNWDVVCQPK 111

Query: 842  HLGGLGIFKT 813
             LG +GI KT
Sbjct: 112  QLGDIGIKKT 121


>gb|ABO80459.1| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
            [Medicago truncatula]
          Length = 869

 Score =  117 bits (293), Expect(2) = 6e-31
 Identities = 78/252 (30%), Positives = 126/252 (50%), Gaps = 3/252 (1%)
 Frame = -3

Query: 804  NLSLLTSLIWRL-KNNNNVWANVLSKKYLCLRNQNLSNHKPSDSYIWKIISRTFPFFANG 628
            N  LL  L+W L  N + +W ++L+ KY    N   ++   S S IW  I R      +G
Sbjct: 381  NTCLLGKLVWELFHNKHKLWVSLLAAKYTAGPNLLNASITSSSSPIWSSIIRAKNVLISG 440

Query: 627  ISWCEGLGNNINLWSDNWIE--PSRSLREVIHGPLNSSDLNLDVSNILANNEWDLSCLSF 454
             SW  G G++ + W  +W E  P  SL  +I    +  DL+L V ++++NN+  L  L  
Sbjct: 441  YSWRPGSGSS-SFWFTHWSEFGPLCSLVPII----DIHDLHLTVKDVISNNQRSLM-LYT 494

Query: 453  EFPQSILNSIRNTYTQSYNPKNDSYFWNYSSDGSFNTKSAYALYLSSLKPS*NSITSQFN 274
              PQ++ + I     +  +   D + W ++ +G+++ KS Y  +L SL  + N+ T  ++
Sbjct: 495  PLPQAVTDCINTINFRFNDAIEDVFIWPHNKNGTYSAKSGYQ-WLLSLSGNDNN-THSWS 552

Query: 273  WAWKIQATNRIKFFMWLLLNNKLPTAFSLFFRNIIPSKYCASCTNIEEDTCHIFVSCPDA 94
            W  K + + + KF +WL  ++ LPTA  L  R II S  CA C   +E   H    CP +
Sbjct: 553  WILKKKISEKYKFLIWLACHDSLPTAALLHHRQIIASATCARCGVSDESVFHCIRDCPFS 612

Query: 93   VPIWNHFAIAIP 58
              IW+H   + P
Sbjct: 613  KIIWHHIGFSEP 624



 Score = 45.4 bits (106), Expect(2) = 6e-31
 Identities = 20/46 (43%), Positives = 29/46 (63%)
 Frame = -1

Query: 959 ISQTNRNRIDRIQRNFLWGSTTNKKKIHLVNWDSVNMPKHLGGLGI 822
           I +  RNR+   +   L  + TN++ +HLV W  + MP+HLGGLGI
Sbjct: 329 IIEKMRNRLATWKNKLLNKAGTNRRGVHLVGWKKIAMPRHLGGLGI 374


>sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H protein At1g65750
          Length = 620

 Score = 98.2 bits (243), Expect(2) = 8e-31
 Identities = 68/247 (27%), Positives = 109/247 (44%), Gaps = 6/247 (2%)
 Frame = -3

Query: 804 NLSLLTSLIWRL-KNNNNVWANVLSKKYLC--LRNQNLSNHKPSDSYIWKIISRTF-PFF 637
           N +L++ + WRL +  N++W  VL KKY    +R+      K S S  W+ I+       
Sbjct: 110 NRALISKVGWRLLQEKNSLWTLVLQKKYHVGEIRDSRWLIPKGSWSSTWRSIAIGLRDVV 169

Query: 636 ANGISWCEGLGNNINLWSDNWIEPSRSLREVIHGPLNSSDLNLDVSNIL--ANNEWDLSC 463
           ++G+ W  G G  I  W+D W+   + L E+ +G    +D +  V+  L      WD + 
Sbjct: 170 SHGVGWIPGDGQQIRFWTDRWVS-GKPLLELDNGE-RPTDCDTVVAKDLWIPGRGWDFAK 227

Query: 462 LSFEFPQSILNSIRNTYTQSYNPKNDSYFWNYSSDGSFNTKSAYALYLSSLKPS*NSITS 283
           +      +    +R           D   W +S DG F+ +SAY +      P  N + S
Sbjct: 228 IDPYTTNNTRLELRAVVLDLVTGARDRLSWKFSQDGQFSVRSAYEMLTVDEVPRPN-MAS 286

Query: 282 QFNWAWKIQATNRIKFFMWLLLNNKLPTAFSLFFRNIIPSKYCASCTNIEEDTCHIFVSC 103
            FN  WK++   R+K F+WL+ N  + T      R++  S  C  C    E   H+   C
Sbjct: 287 FFNCLWKVRVPERVKTFLWLVGNQAVMTEEERHRRHLSASNVCQVCKGGVESMLHVLRDC 346

Query: 102 PDAVPIW 82
           P  + IW
Sbjct: 347 PAQLGIW 353



 Score = 64.3 bits (155), Expect(2) = 8e-31
 Identities = 30/66 (45%), Positives = 44/66 (66%), Gaps = 5/66 (7%)
 Frame = -1

Query: 1004 MSYIKSILASIPTYAIS-----QTNRNRIDRIQRNFLWGSTTNKKKIHLVNWDSVNMPKH 840
            ++  K++L+S+P +++S     Q+  NR+D++ R FLWGST  KKK HLV W  V  PK 
Sbjct: 38   LTLTKAVLSSMPVHSMSTILLPQSILNRLDQLSRTFLWGSTAEKKKQHLVKWSKVCSPKK 97

Query: 839  LGGLGI 822
             GGLG+
Sbjct: 98   EGGLGV 103


>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1231

 Score =  103 bits (256), Expect(2) = 8e-30
 Identities = 65/259 (25%), Positives = 109/259 (42%), Gaps = 4/259 (1%)
 Frame = -3

Query: 804  NLSLLTSLIWRL-KNNNNVWANVLSKKYLCLRNQNLSNHKPSD--SYIWKIISRTF-PFF 637
            N +L+  + WRL ++  ++WA V+ KKY     Q+ S  KP    S  W+ ++       
Sbjct: 725  NKALVAKVGWRLLQDKESLWARVVRKKYKVGGVQDTSWLKPQPRWSSTWRSVAVGLREVV 784

Query: 636  ANGISWCEGLGNNINLWSDNWIEPSRSLREVIHGPLNSSDLNLDVSNILANNEWDLSCLS 457
              G+ W  G G  I  W D W+     +            + +     L  + W+L  L 
Sbjct: 785  VKGVGWVPGDGCTIRFWLDRWLLQEPLVELGTDMIPEGERIKVAADYWLPGSGWNLEILG 844

Query: 456  FEFPQSILNSIRNTYTQSYNPKNDSYFWNYSSDGSFNTKSAYALYLSSLKPS*NSITSQF 277
               P+++   + +   Q +    D   W  + DG+F  +SAY+L    +    N + S F
Sbjct: 845  LYLPETVKRRLLSVVVQVFLGNGDEISWKGTQDGAFTVRSAYSLLQGDVGDRPN-MGSFF 903

Query: 276  NWAWKIQATNRIKFFMWLLLNNKLPTAFSLFFRNIIPSKYCASCTNIEEDTCHIFVSCPD 97
            N  WK+    R++ F+WL+  N + T      R++  +  C+ C   EE   H+   CP 
Sbjct: 904  NRIWKLITPERVRVFIWLVSQNVIMTNVERVRRHLSENAICSVCNGAEETILHVLRDCPA 963

Query: 96   AVPIWNHFAIAIPTHDFLN 40
              PIW         H+F +
Sbjct: 964  MEPIWRRLLPLRRHHEFFS 982



 Score = 55.8 bits (133), Expect(2) = 8e-30
 Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 5/62 (8%)
 Frame = -1

Query: 992 KSILASIPTYAISQ-----TNRNRIDRIQRNFLWGSTTNKKKIHLVNWDSVNMPKHLGGL 828
           K++L+SIP + +S      +  + +DR  R FLWGST  KKK HL++W  +  PK  GG+
Sbjct: 657 KAVLSSIPVHVMSAILLPVSTLDTLDRYSRTFLWGSTMEKKKQHLLSWRKICKPKAEGGI 716

Query: 827 GI 822
           G+
Sbjct: 717 GL 718


>gb|AAD32950.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 773

 Score =  113 bits (282), Expect(2) = 1e-29
 Identities = 84/269 (31%), Positives = 120/269 (44%), Gaps = 10/269 (3%)
 Frame = -3

Query: 804  NLSLLTSLIWR-LKNNNNVWANVLSKKYLCLRNQNLSNHKPSDSYIWKIISRTFPFFANG 628
            N++LL    WR L+   ++ A V   KY        +      SY WK I       + G
Sbjct: 317  NIALLAKQSWRILQQPFSLMARVFKAKYFPKERLLDAKATSQSSYAWKSILHGTKLISRG 376

Query: 627  ISWCEGLGNNINLWSDNWIEPSRSLREVIHGPLNSSDLNLDVSNILANNEWDLSCLSFEF 448
            + +  G GNNI LW DNW+ P    R  + G  +S    L VS++L    W+   L    
Sbjct: 377  LKYIAGNGNNIQLWKDNWL-PLNPPRPPV-GTCDSIYSQLKVSDLLIEGRWNEDLLCKLI 434

Query: 447  PQSILNSIRNTYTQSYNPKNDSYFWNYSSDGSFNTKSAYALY--LSSLK----PS*NSIT 286
             Q+ +  IR     S    ND+  W Y+ DG+++ KS Y L   LS  +    PS N ++
Sbjct: 435  HQNDIPHIR-AIRPSITGANDAITWIYTHDGNYSVKSGYHLLRKLSQQQHASLPSPNEVS 493

Query: 285  SQ--FNWAWKIQATNRIKFFMWLLLNNKLPTAFSLFFRNIIPSKYCASCTNIEEDTCHIF 112
            +Q  F   WK  A  +IK F W   +N LPTA +L  R +I    C  C    ED  H+ 
Sbjct: 494  AQTVFTNIWKQNAPPKIKHFWWRSAHNALPTAGNLKRRRLITDDTCQRCGEASEDVNHLL 553

Query: 111  VSCPDAVPIWNHFAIAI-PTHDFLNNLFH 28
              C  +  IW    I + P    ++N F+
Sbjct: 554  FQCRVSKEIWEQAHIKLCPGDSLMSNSFN 582



 Score = 45.1 bits (105), Expect(2) = 1e-29
 Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
 Frame = -1

Query: 995 IKSILASIPTYAIS-----QTNRNRIDRIQRNFLWGSTTNKKKIHLVNWDSVNMPKHLGG 831
           IKSI+ +IPTY++S         ++I    R F W +T  K KI  V W  +N PK +GG
Sbjct: 248 IKSIVTAIPTYSMSCFLLPMRLIHQITSAMRWFWWSNTKVKHKIPWVAWSKLNDPKKMGG 307

Query: 830 LGI 822
           L I
Sbjct: 308 LAI 310


>ref|XP_004289445.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
            vesca subsp. vesca]
          Length = 719

 Score = 86.7 bits (213), Expect(2) = 3e-29
 Identities = 59/247 (23%), Positives = 98/247 (39%), Gaps = 5/247 (2%)
 Frame = -3

Query: 804  NLSLLTSLIWRL-KNNNNVWANVLSKKYL---CLRNQNLSNHKPSD-SYIWKIISRTFPF 640
            N ++L    WR+ +N++ +WA++  KKYL   C+ + N  +  P+D S  W+ I      
Sbjct: 413  NQAMLAKASWRIFQNDHGLWADIYRKKYLQDCCIESSN--SIAPADCSNTWRGIVHGVEL 470

Query: 639  FANGISWCEGLGNNINLWSDNWIEPSRSLREVIHGPLNSSDLNLDVSNILANNEWDLSCL 460
                + W  G G  I  W                        N  +     +  W++S L
Sbjct: 471  MRRNLKWRIGDGAKIKFW------------------------NATIKEFWCDTSWNISLL 506

Query: 459  SFEFPQSILNSIRNTYTQSYNPKNDSYFWNYSSDGSFNTKSAYALYLSSLKPS*NSITSQ 280
                P  ++  I +  +      +D   WN +++G F+ KS Y  +  S   S       
Sbjct: 507  KSVLPDHVVMQIISVPSGFGVSGHDKLIWNATANGKFSVKSTYNSFFDSAGVS----NPL 562

Query: 279  FNWAWKIQATNRIKFFMWLLLNNKLPTAFSLFFRNIIPSKYCASCTNIEEDTCHIFVSCP 100
            +   WK+    ++K FMW +L+ K+ T      R       C  C N +E   H+   CP
Sbjct: 563  WTHLWKLNCPPKLKTFMWSVLHQKILTNVQRVRRGFSTIASCPICKNADETLLHLLRDCP 622

Query: 99   DAVPIWN 79
             +  IWN
Sbjct: 623  RSQAIWN 629



 Score = 70.5 bits (171), Expect(2) = 3e-29
 Identities = 34/69 (49%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
 Frame = -1

Query: 1004 MSYIKSILASIPTYAISQTNR-----NRIDRIQRNFLWGSTTNKKKIHLVNWDSVNMPKH 840
            ++ ++S+ ASIP YA+            ID+   NFLWG +  KKKIHLVNW+SV  PKH
Sbjct: 341  LTLVQSVTASIPIYAMQTAKLPLSLCESIDKANINFLWGDSNEKKKIHLVNWESVCKPKH 400

Query: 839  LGGLGIFKT 813
             GGLG+ KT
Sbjct: 401  RGGLGLKKT 409


>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 95.5 bits (236), Expect(2) = 1e-28
 Identities = 67/264 (25%), Positives = 116/264 (43%), Gaps = 4/264 (1%)
 Frame = -3

Query: 804  NLSLLTSLIWRLKNN-NNVWANVLSKKYLCLRNQNLSNHKPSDSYIWKIISRTFPFFANG 628
            N + LT + W++ +N + +W  VL +KY+   +      + + S+ W+ I +     A  
Sbjct: 866  NRAFLTKMAWQIFSNIDKLWVKVLREKYVKNADFLHLQSQSNCSWGWRSIMKGKDVLAGA 925

Query: 627  ISWCEGLGNNINLWSDNWIE--PSRSLREVIHGPLNSSDLNLDVSNILANNEWDLSCLSF 454
            I W  G G  IN W+D W+   P  S  + I+ P + +D+ ++   I +   WD   L  
Sbjct: 926  IKWNVGNGRKINFWNDWWVGDGPLASNTDCINQP-HMTDIKVE-DLITSQRRWDTGALHN 983

Query: 453  EFPQSILNSIRNTYTQSYNPKNDSYFWNYSSDGSFNTKSAYALYLSSLKPS*NSITSQFN 274
              P ++++ +R T     + + D   W +S+ G     SAY+L         +      +
Sbjct: 984  ILPTNMIDMVRATPIAINSEQEDFLSWPHSTTGMVTVSSAYSLIAGH-----DGDDRSHD 1038

Query: 273  WAWKIQATNRIKFFMWLLLNNKLPTAFSLFFRNIIPSKYCASCTNIEEDTCHIFVSCPDA 94
            W W+   T +IK FMW ++ N L        R +  +  C  C   +E   H+F  C  A
Sbjct: 1039 WIWRATCTEKIKLFMWKIVKNGLMVNVERKRRGLADAASCPVCGEEDETLDHLFRRCLLA 1098

Query: 93   VPIWNHFAIAIPTHDF-LNNLFHL 25
               W+    A+P   F  +N  H+
Sbjct: 1099 EACWDS---AVPPLTFQTSNHLHM 1119



 Score = 59.7 bits (143), Expect(2) = 1e-28
 Identities = 27/63 (42%), Positives = 41/63 (65%), Gaps = 5/63 (7%)
 Frame = -1

Query: 995 IKSILASIPTY-----AISQTNRNRIDRIQRNFLWGSTTNKKKIHLVNWDSVNMPKHLGG 831
           +++ LA++PTY     A+  +  N ID+  RNFLWG  TN +K+H VNW  +  P++ GG
Sbjct: 797 VQASLATVPTYTMQVMALPVSTCNEIDKTCRNFLWGHDTNTRKLHSVNWAEICKPRNEGG 856

Query: 830 LGI 822
           LG+
Sbjct: 857 LGL 859


>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 95.5 bits (236), Expect(2) = 1e-28
 Identities = 67/264 (25%), Positives = 116/264 (43%), Gaps = 4/264 (1%)
 Frame = -3

Query: 804  NLSLLTSLIWRLKNN-NNVWANVLSKKYLCLRNQNLSNHKPSDSYIWKIISRTFPFFANG 628
            N + LT + W++ +N + +W  VL +KY+   +      + + S+ W+ I +     A  
Sbjct: 866  NRAFLTKMAWQIFSNIDKLWVKVLREKYVKNADFLHLQSQSNCSWGWRSIMKGKDVLAGA 925

Query: 627  ISWCEGLGNNINLWSDNWIE--PSRSLREVIHGPLNSSDLNLDVSNILANNEWDLSCLSF 454
            I W  G G  IN W+D W+   P  S  + I+ P + +D+ ++   I +   WD   L  
Sbjct: 926  IKWNVGNGRKINFWNDWWVGDGPLASNTDCINQP-HMTDIKVE-DLITSQRRWDTGALHN 983

Query: 453  EFPQSILNSIRNTYTQSYNPKNDSYFWNYSSDGSFNTKSAYALYLSSLKPS*NSITSQFN 274
              P ++++ +R T     + + D   W +S+ G     SAY+L         +      +
Sbjct: 984  ILPTNMIDMVRATPIAINSEQEDFLSWPHSTTGMVTVSSAYSLIAGH-----DGDDRSHD 1038

Query: 273  WAWKIQATNRIKFFMWLLLNNKLPTAFSLFFRNIIPSKYCASCTNIEEDTCHIFVSCPDA 94
            W W+   T +IK FMW ++ N L        R +  +  C  C   +E   H+F  C  A
Sbjct: 1039 WIWRATCTEKIKLFMWKIVKNGLMVNVERKRRGLADAASCPVCGEEDETLDHLFRRCLLA 1098

Query: 93   VPIWNHFAIAIPTHDF-LNNLFHL 25
               W+    A+P   F  +N  H+
Sbjct: 1099 EACWDS---AVPPLTFQTSNHLHM 1119



 Score = 59.7 bits (143), Expect(2) = 1e-28
 Identities = 27/63 (42%), Positives = 41/63 (65%), Gaps = 5/63 (7%)
 Frame = -1

Query: 995 IKSILASIPTY-----AISQTNRNRIDRIQRNFLWGSTTNKKKIHLVNWDSVNMPKHLGG 831
           +++ LA++PTY     A+  +  N ID+  RNFLWG  TN +K+H VNW  +  P++ GG
Sbjct: 797 VQASLATVPTYTMQVMALPVSTCNEIDKTCRNFLWGHDTNTRKLHSVNWAEICKPRNEGG 856

Query: 830 LGI 822
           LG+
Sbjct: 857 LGL 859


>ref|XP_006577420.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
           max]
          Length = 597

 Score = 90.9 bits (224), Expect(2) = 1e-27
 Identities = 61/259 (23%), Positives = 116/259 (44%), Gaps = 18/259 (6%)
 Frame = -3

Query: 804 NLSLLTSLIWRLKNNNN-VWANVLSKKYLCLRNQNLSNHKPSDSYIWKIISRTFPF---- 640
           N +LL   IW L +++  +W  +++ KY        +  +   S  W+ + + + +    
Sbjct: 154 NTALLGKWIWALASDHQQLWVRIINSKYGGWEALQSARAQGRHSGWWRDLRKLYHYDGQS 213

Query: 639 -FANGISWCEGLGNNINLWSDNWIEPSRSLREVIHGPLNSSDLNLDVSNILA-------- 487
            F + + W  G G+ +  W D WI    +L++  +     ++   D+ +++         
Sbjct: 214 IFQHCMRWKVGCGDKVYFWKDKWIGEDFTLQQKYNQLFLINEQQDDLISMMGTFDQDRWS 273

Query: 486 -NNEWDLSCLSFEFPQSI--LNSIRNTYTQSYNPKNDSYFWNYSSDGSFNTKSAYALYLS 316
            N +W  +   +E  Q++  +  I + Y Q Y    D   W     G + TKSAY L ++
Sbjct: 274 WNLKWRRNLFDYESDQAVNFMEEINSMYIQRY--VKDVMLWKADPSGVYTTKSAYNLLIT 331

Query: 315 SLKPS*NSITSQFNWAWKIQATNRIKFFMWLLLNNKLPTAFSLFFRNI-IPSKYCASCTN 139
              P+ +  TSQ  W  KI   + +  F W  L+ +LPT  +L  R + I    C  C +
Sbjct: 332 PSSPALDRRTSQLLWNMKIPPKHAV--FTWKFLSGRLPTRANLSRRGVNIQDTACPLCGD 389

Query: 138 IEEDTCHIFVSCPDAVPIW 82
           ++E+  H+F +C   + +W
Sbjct: 390 VQEEVGHLFFNCKKILGLW 408



 Score = 60.8 bits (146), Expect(2) = 1e-27
 Identities = 35/81 (43%), Positives = 48/81 (59%), Gaps = 5/81 (6%)
 Frame = -1

Query: 1013 GESMSYIKSILASIPTYAIS-----QTNRNRIDRIQRNFLWGSTTNKKKIHLVNWDSVNM 849
            G  ++ I S+L ++P Y +S     Q   NR+ ++QRNFLWG   + KKI  V WD V +
Sbjct: 79   GGKITLINSVLNTLPIYLLSFFKIPQKVINRLVKLQRNFLWGGDQDNKKIPWVKWDIVCL 138

Query: 848  PKHLGGLGIFKTTGKISPSLL 786
            PK  GGLGI K   K + +LL
Sbjct: 139  PKCEGGLGI-KDIAKFNTALL 158


>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
          Length = 1898

 Score = 91.7 bits (226), Expect(2) = 2e-27
 Identities = 66/264 (25%), Positives = 115/264 (43%), Gaps = 4/264 (1%)
 Frame = -3

Query: 804  NLSLLTSLIWRLKNN-NNVWANVLSKKYLCLRNQNLSNHKPSDSYIWKIISRTFPFFANG 628
            N + LT + W++ +N + +W  VL +KY+   +      + + S+ W+ I +     A  
Sbjct: 1398 NRAFLTKMAWQIFSNIDKLWVKVLREKYVKNADFLHLQSQSNCSWGWRSIMKGKDVLAGA 1457

Query: 627  ISWCEGLGNNINLWSDNWIE--PSRSLREVIHGPLNSSDLNLDVSNILANNEWDLSCLSF 454
            I W  G G  IN W+D W+   P  S  + I+ P + +D+ ++     +   WD   L  
Sbjct: 1458 IKWNVGNGRKINFWNDWWVGDGPLASNTDCINQP-HMTDIKVE-DLTTSQRRWDTGALHN 1515

Query: 453  EFPQSILNSIRNTYTQSYNPKNDSYFWNYSSDGSFNTKSAYALYLSSLKPS*NSITSQFN 274
              P ++++ +R T     + + D   W +S+ G     SAY+L         +      +
Sbjct: 1516 ILPINMIDMVRATPIAINSEQEDFPSWPHSTTGMVTVSSAYSLIAGH-----DGDGRSHD 1570

Query: 273  WAWKIQATNRIKFFMWLLLNNKLPTAFSLFFRNIIPSKYCASCTNIEEDTCHIFVSCPDA 94
            W W+   T +IK FMW ++ N L        R +  +  C  C   +E   H+F  C  A
Sbjct: 1571 WIWRATCTEKIKLFMWKIVKNGLMVNVERKRRGLADAASCPVCGEEDETLDHLFRRCLLA 1630

Query: 93   VPIWNHFAIAIPTHDF-LNNLFHL 25
               W+    A+P   F  +N  H+
Sbjct: 1631 EACWDS---AVPPLTFQTSNHLHM 1651



 Score = 59.7 bits (143), Expect(2) = 2e-27
 Identities = 27/63 (42%), Positives = 41/63 (65%), Gaps = 5/63 (7%)
 Frame = -1

Query: 995  IKSILASIPTY-----AISQTNRNRIDRIQRNFLWGSTTNKKKIHLVNWDSVNMPKHLGG 831
            +++ LA++PTY     A+  +  N ID+  RNFLWG  TN +K+H VNW  +  P++ GG
Sbjct: 1329 VQASLATVPTYTMQVMALPVSTCNEIDKTCRNFLWGHDTNTRKLHSVNWAEICKPRNEGG 1388

Query: 830  LGI 822
            LG+
Sbjct: 1389 LGL 1391


>ref|XP_006582712.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
           max]
          Length = 433

 Score = 89.7 bits (221), Expect(2) = 4e-27
 Identities = 60/259 (23%), Positives = 116/259 (44%), Gaps = 18/259 (6%)
 Frame = -3

Query: 804 NLSLLTSLIWRLKNNNN-VWANVLSKKYLCLRNQNLSNHKPSDSYIWKIISRTFPF---- 640
           N +LL   IW L +++  +W  +++ KY        +  +   S  W+ + + + +    
Sbjct: 77  NTALLGKWIWALASDHQQLWVRIINSKYGGWEALQSTRAQGRHSGWWRDLRKLYHYDGQS 136

Query: 639 -FANGISWCEGLGNNINLWSDNWIEPSRSLREVIHGPLNSSDLNLDVSNILA-------- 487
            F + + W  G G+ +  W D WI    + ++  +     ++   D+ +++         
Sbjct: 137 IFQHCMRWKVGCGDKVYFWKDKWIGEDFTFQQKYNQLFLINEQQDDLISMMGTFDQDRWS 196

Query: 486 -NNEWDLSCLSFEFPQSI--LNSIRNTYTQSYNPKNDSYFWNYSSDGSFNTKSAYALYLS 316
            N +W  +   +E  Q++  +  I + Y Q Y    D   W     G + TKSAY L ++
Sbjct: 197 WNLKWRRNLFDYESDQAVNFMEEINSMYIQRY--VKDVMLWKADPSGVYTTKSAYNLLIT 254

Query: 315 SLKPS*NSITSQFNWAWKIQATNRIKFFMWLLLNNKLPTAFSLFFRNI-IPSKYCASCTN 139
              P+ +  TS+  W  KI   + +  F W LL+ +LPT  +L  R + I    C  C +
Sbjct: 255 PSSPALDRRTSELLWNMKIPPKHAV--FTWKLLSGRLPTRANLSRRGVNIQDTACPLCGD 312

Query: 138 IEEDTCHIFVSCPDAVPIW 82
           ++E+  H+F +C   + +W
Sbjct: 313 VQEEVGHLFFNCKKILGLW 331



 Score = 60.5 bits (145), Expect(2) = 4e-27
 Identities = 34/81 (41%), Positives = 48/81 (59%), Gaps = 5/81 (6%)
 Frame = -1

Query: 1013 GESMSYIKSILASIPTYAIS-----QTNRNRIDRIQRNFLWGSTTNKKKIHLVNWDSVNM 849
            G  ++ I S+L ++P Y +S     Q   NR+ ++QRNFLWG   + KKI  V WD + +
Sbjct: 2    GGEITLINSVLNALPIYLLSFFKIPQKVINRLVKLQRNFLWGGDQDNKKIPWVKWDIICL 61

Query: 848  PKHLGGLGIFKTTGKISPSLL 786
            PK  GGLGI K   K + +LL
Sbjct: 62   PKCEGGLGI-KDIAKFNTALL 81


>gb|ADK92871.1| retrotransposon protein [Hypericum perforatum]
          Length = 593

 Score =  104 bits (259), Expect(2) = 8e-27
 Identities = 70/264 (26%), Positives = 108/264 (40%), Gaps = 7/264 (2%)
 Frame = -3

Query: 804 NLSLLTSLIWRLKN-NNNVWANVLSKKYLCLRNQNLSNHKPSDSYIWKIISRTFPFFANG 628
           N ++L    WRL    N++ A +L  KY   ++    +  P  SY W+ I +       G
Sbjct: 102 NRAMLAKQGWRLLTLPNSLAATILRAKYYPRKSPLEISSSPYSSYTWRSILKGSQLLQKG 161

Query: 627 ISWCEGLGNNINLWSDNWIEPSRSLREVIHGPLNSSDLNLDVSNILANNEWDLSCLSFEF 448
           I W  G GN +  WSD WI  S +     H P   SDL   VS+ + N  W+ + L   F
Sbjct: 162 IEWRIGQGNTVRTWSDPWIPGSDTGLPKYHSP--GSDLYTHVSDFIQNGGWNENLLRLCF 219

Query: 447 PQSILNSIRNTYTQSYNPKNDSYFWNYSSDGSFNTKSAYAL------YLSSLKPS*NSIT 286
            +  +  I         P  D   W +  DG +  +S Y +      + +   P  ++  
Sbjct: 220 EEEDVTRILQIRLSLRRPL-DMVRWKFIKDGEYTVRSGYYIDFNCWWHENYATPLTHAGE 278

Query: 285 SQFNWAWKIQATNRIKFFMWLLLNNKLPTAFSLFFRNIIPSKYCASCTNIEEDTCHIFVS 106
            ++   W ++   RIK  +W L++N L    +L  R I   + C  C    E   H+F  
Sbjct: 279 ERWKTCWGLRCPPRIKTLLWRLIDNNLSVRTNLTRRGIQVDEVCPCCAGPSETAAHLFFC 338

Query: 105 CPDAVPIWNHFAIAIPTHDFLNNL 34
           CP  + IW    + I      N L
Sbjct: 339 CPYTLDIWKEVNVQIQVESSENIL 362



 Score = 44.7 bits (104), Expect(2) = 8e-27
 Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
 Frame = -1

Query: 995 IKSILASIPTYAIS-----QTNRNRIDRIQRNFLWGSTTNKKKIHLVNWDSVNMPKHLGG 831
           IKS+L SI TY +      +   +RI+++  NF WG   N  K+H  +W+ +   K  GG
Sbjct: 33  IKSVLQSISTYIMGCFELPEGTCDRIEKMMCNFYWGGDRNGSKMHWRSWEKLCRSKRNGG 92

Query: 830 LG 825
           LG
Sbjct: 93  LG 94


>gb|AEL30350.1| RNA-directed DNA polymerase [Arachis hypogaea]
          Length = 673

 Score =  103 bits (257), Expect(2) = 1e-26
 Identities = 75/277 (27%), Positives = 117/277 (42%), Gaps = 7/277 (2%)
 Frame = -3

Query: 840 FGWAGYF*NYWKNLSLLTSLIWRL-KNNNNVWANVLSKKYLCLRNQNLSNHKPSDSYIWK 664
           +G  G    Y  N++LL  L+W   +  N +W  +L  KY        S  K  DS IW+
Sbjct: 183 YGGLGIRDPYCVNIALLGKLVWTFFQQPNKLWVQLLDAKYRSSLYDCFSYPKNKDSPIWR 242

Query: 663 IISRTFPFFANGISWCEGLGNNINLWSDNWIEPSRSLREVIHGPLNSSDLNLDVSNILAN 484
            + + +    +G +WC G   N N W  +W    R   E+ +  ++ SD NL + +I + 
Sbjct: 243 CLCKAWKVLKDGFAWCIG-DLNQNFWFSSWRREGRLSNEMDY--VHISDSNLRIQDIWSV 299

Query: 483 NEWDLSCLSFEFPQSILNSIRNTYTQSYNPKNDS-----YFWNYSSDGSFNTKSAYALYL 319
             W L  L     Q++ ++I      SYNP   +     ++W+ S+   +++++ Y    
Sbjct: 300 GRWHLDTLYSPLSQNLKDNIL-----SYNPDEQAGPEVGWYWSGSAAKVYDSRNGYLWLC 354

Query: 318 SSLKPS*NSITSQFNWAWKIQATNRIKFFMWLLLNNKLPTAFSLFFRNIIPSKYCASCTN 139
             L          + W W      + KF  WL L   LPTA   F R +  S  C  C +
Sbjct: 355 KQLFGW--EERENWLWLWCQLVPEKHKFLAWLCLKEALPTASFRFRRGMSSSDRCPRCLS 412

Query: 138 IEEDTCHIFVSCPDAVPIWNHFAIAIPTHDF-LNNLF 31
            +E   H    CP A  +W    + IP H   L N F
Sbjct: 413 SQESVIHCIRDCPKAQLVWQR--LDIPCHPLDLKNWF 447



 Score = 44.7 bits (104), Expect(2) = 1e-26
 Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
 Frame = -1

Query: 1016 RGESMSYIKSILASIPTYAISQTNR-----NRIDRIQRNFLWGSTTNKKKIHLVNWDSVN 852
            R   +  + S+ A+IPTY +  +       ++++ + RNFLW    + + ++LV+W  + 
Sbjct: 119  RAGRLCLVNSVAAAIPTYQMQVSIFPKGIISKLESMMRNFLWKGQVDGRGLNLVSWKVLV 178

Query: 851  MPKHLGGLGI 822
             PK  GGLGI
Sbjct: 179  TPKKYGGLGI 188


>ref|XP_006469117.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
           sinensis]
          Length = 491

 Score = 97.1 bits (240), Expect(2) = 2e-26
 Identities = 68/245 (27%), Positives = 104/245 (42%), Gaps = 3/245 (1%)
 Frame = -3

Query: 804 NLSLLTSLIWRLKNN-NNVWANVLSKKY-LCLRNQNLSNHKPSDSYIWKIISRTFPFFAN 631
           N +L+  L W L +   ++W  VL  KY +   +  L     S S++WK I + +     
Sbjct: 101 NKALMMKLAWGLVSEPTSLWCRVLYTKYGVADSDFPLGLPTRSGSHLWKSIGKVWSDTLK 160

Query: 630 GISWCEGLGNNINLWSDNWIEPSRSLREVIHGPLNSSDL-NLDVSNILANNEWDLSCLSF 454
           G+ W    G  +  W D W+   + L      P+    L NL V  + AN  W       
Sbjct: 161 GLQWNIVNGRRVRFWLDCWVTKHKPLSSYALAPIPVESLMNLIVDFVDANGNWRWDSFEH 220

Query: 453 EFPQSILNSIRNTYTQSYNPKNDSYFWNYSSDGSFNTKSAYALYLSSLKPS*NSITSQFN 274
             P  I+  I           +D +FW  S  G F+ KSAY   ++  K       S++N
Sbjct: 221 LLPNCIILRIAAVQPPMEGKGDDKFFWANSQRGDFSVKSAY---MAITKNEIGIEHSRWN 277

Query: 273 WAWKIQATNRIKFFMWLLLNNKLPTAFSLFFRNIIPSKYCASCTNIEEDTCHIFVSCPDA 94
            AWK +   R++ F+WL L+++L T   +  R+I     C  C    E T H+   C  A
Sbjct: 278 IAWKWKGPPRVQTFIWLALHDRLKTKAEIGRRHIHIDWTCDHCGVASETTLHVLRDCFMA 337

Query: 93  VPIWN 79
             +WN
Sbjct: 338 KRLWN 342



 Score = 50.8 bits (120), Expect(2) = 2e-26
 Identities = 26/76 (34%), Positives = 46/76 (60%), Gaps = 6/76 (7%)
 Frame = -1

Query: 992 KSILASIPTYAISQTNR------NRIDRIQRNFLWGSTTNKKKIHLVNWDSVNMPKHLGG 831
           +S+L +IP Y + QT+       N+I++I + F+W  +   +K+ L+ WD V  PK  GG
Sbjct: 33  QSVLQAIPVYTM-QTSEIPAGVINKINQICKRFIWSGSNENRKMSLIGWDKVCQPKLCGG 91

Query: 830 LGIFKTTGKISPSLLV 783
           LG+ K  G ++ +L++
Sbjct: 92  LGL-KNLGMMNKALMM 106


>ref|XP_006589908.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
           max]
          Length = 433

 Score = 91.3 bits (225), Expect(2) = 2e-26
 Identities = 72/261 (27%), Positives = 115/261 (44%), Gaps = 20/261 (7%)
 Frame = -3

Query: 804 NLSLLTSLIWRLK-NNNNVWANVLSKKYLCLRNQNLSNHKPSDSYIWKIISRT-----FP 643
           N +LL   IW L  N+N +W  ++S KY           +P  S  WK + +      F 
Sbjct: 77  NAALLGRWIWDLSYNHNQLWVRIISSKYGGWAELINGRDRPWHSQWWKDLRKLVNQPDFS 136

Query: 642 FFANGISWCEGLGNNINLWSDNWIEPSRSLREVIHGP-LNSSDLNLDVSNILANNE---- 478
                + W  G G  IN W D WI    +L +  +   L S   N ++ ++ + +     
Sbjct: 137 SIIQQMEWKVGDGTLINFWKDKWIGTDSNLEQQFNQLFLISRQQNCNIRSMGSFSHGSWC 196

Query: 477 WDLSCLS--FEFPQS----ILNSIRNTYTQSYNPKNDSYFWNYSSDGSFNTKSAYALYLS 316
           WDL+     F+  Q+     ++ I N + Q +    D+  W     G +++KSAY+L  +
Sbjct: 197 WDLNWRRNLFDHEQTEAVTFMDLISNVHIQPH--LKDTMRWLADPSGLYSSKSAYSLLTN 254

Query: 315 SLK--PS*NSITSQFNWAWKIQATNRIKFFMWLLLNNKLPTAFSLFFRNI-IPSKYCASC 145
             +  P  N   S     WK+    R   F W +L NKLPT  +LF RN+  P   C  C
Sbjct: 255 VNRNLPHPNIYKS----LWKLNIPPRAAVFAWRILKNKLPTRHNLFKRNVSFPDYTCPLC 310

Query: 144 TNIEEDTCHIFVSCPDAVPIW 82
            + +E+  H+F +C   + +W
Sbjct: 311 RSHQEEAGHLFFNCKATIALW 331



 Score = 56.2 bits (134), Expect(2) = 2e-26
 Identities = 30/78 (38%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
 Frame = -1

Query: 1004 MSYIKSILASIPTYAIS-----QTNRNRIDRIQRNFLWGSTTNKKKIHLVNWDSVNMPKH 840
            ++ I S+L ++P Y +S     Q    ++  +QRNFLWG   + KKI  V WD + +PK 
Sbjct: 5    VTLINSVLTALPIYLLSFFKIPQKVARKVISLQRNFLWGGDHDYKKISWVKWDIICLPKE 64

Query: 839  LGGLGIFKTTGKISPSLL 786
             GGLGI K     + +LL
Sbjct: 65   FGGLGI-KNINNFNAALL 81


>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1389

 Score =  110 bits (275), Expect(2) = 4e-26
 Identities = 69/251 (27%), Positives = 118/251 (47%), Gaps = 8/251 (3%)
 Frame = -3

Query: 804  NLSLLTSLIWRLK-NNNNVWANVLSKKYLCLRNQNLSNHKPSDSYIWKIISRTFPFFANG 628
            N++L   L+W++  + +N+W  ++++KYL  +N  +     + S+ WK + R   FF+ G
Sbjct: 878  NIALQMKLLWKIMVSKDNIWVKLVTQKYLKEQNLLVCKIPSNASWQWKNLLRHRNFFSKG 937

Query: 627  ISWCEGLGNNINLWSDNWIEPSRSLREVIHGPLNSSDL------NLDVSNILAN-NEWDL 469
            + W  G G +I+ W+DNWI            PLNS  +      N+ V+        WD+
Sbjct: 938  LRWLIGDGQDISFWTDNWI---------FQYPLNSKYVPTVGSENIKVAECFNGLGGWDI 988

Query: 468  SCLSFEFPQSILNSIRNTYTQSYNPKNDSYFWNYSSDGSFNTKSAYALYLSSLKPS*NSI 289
              L    P +I+ +I + +  S + + D   W  +  G ++ KS  +L       +   +
Sbjct: 989  PKLLTLVPPNIVKAISSVFIPS-SSQQDRLLWGLTPTGQYSVKSGASLIREVNGGTIEKV 1047

Query: 288  TSQFNWAWKIQATNRIKFFMWLLLNNKLPTAFSLFFRNIIPSKYCASCTNIEEDTCHIFV 109
              +FNW W I A  +IK F+W   N+ L T   L   +I   + C  C    E  CH+  
Sbjct: 1048 --EFNWIWGIHAPPKIKNFLWKACNDGLATTSRLERSHIFVPQNCCFCDCPSETICHLCF 1105

Query: 108  SCPDAVPIWNH 76
             CP  + I++H
Sbjct: 1106 QCPFTLDIYSH 1116



 Score = 36.2 bits (82), Expect(2) = 4e-26
 Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
 Frame = -1

Query: 995  IKSILAS-----IPTYAISQTNRNRIDRIQRNFLWGSTTNKKKIHLVNWDSVNMPKHLGG 831
            I+S LAS     + ++ + +     +D   RNF W      K  + + W+ +  PK +GG
Sbjct: 809  IQSNLASKASFQMQSFTLPKKVLTTLDTTYRNFFWNKDPAAKSANFIGWNKICQPKSVGG 868

Query: 830  LGIFK 816
            +G  K
Sbjct: 869  VGFRK 873


>ref|XP_003553268.2| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
            max]
          Length = 744

 Score = 90.1 bits (222), Expect(2) = 1e-25
 Identities = 72/252 (28%), Positives = 100/252 (39%), Gaps = 18/252 (7%)
 Frame = -3

Query: 804  NLSLLTSLIWRLKNNNN-VWANVLSKKYLCLRNQNLSNHKPSDSYIWKIISRTFP----- 643
            N +LL    W L NN+N +WA VL  KY               S  WK +   F      
Sbjct: 388  NEALLGKWGWELANNHNQLWARVLLSKYGGWNTLCSGRDNAHFSQWWKDLRSVFQQHHSN 447

Query: 642  FFANGISWCEGLGNNINLWSDNWIEPSRSLREVIHGPLNSSDLNLDVSN---ILANNEWD 472
               N   W  G G+ +N W D W E   SL++      N S     + N   IL +N W+
Sbjct: 448  SLINNFRWKVGDGSRLNFWKDKWREGDLSLKDKYPSLYNVSTQQNHLINSMGILVDNRWE 507

Query: 471  L------SCLSFEFPQSILNSIRNTYTQSYNPKNDSYFWNYSSDGSFNTKSAYALYLSSL 310
                   +    E   ++         Q      D   W   + G ++TK+AY    S L
Sbjct: 508  WKFQWRRNLFDHEVDMAVAFMADIAEFQIQPASRDLLLWGLDTGGPYSTKAAY----SFL 563

Query: 309  KPS*NSIT--SQFNWAWKIQATNRIKFFMWLLLNNKLPTAFSLFFRNI-IPSKYCASCTN 139
            K   + +T  S F   W ++   R   F W L  N++PT  +L  R++ +PS  C  C  
Sbjct: 564  KDGDSQVTEDSDFKSIWNLKIPPRASAFSWRLFKNRIPTKVNLRRRHVELPSYNCPLCDE 623

Query: 138  IEEDTCHIFVSC 103
             EE T HI  SC
Sbjct: 624  EEETTGHILYSC 635



 Score = 55.1 bits (131), Expect(2) = 1e-25
 Identities = 33/81 (40%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
 Frame = -1

Query: 1013 GESMSYIKSILASIPTYAIS-----QTNRNRIDRIQRNFLWGSTTNKKKIHLVNWDSVNM 849
            G  +S I S+L+++P Y +S     +    +   IQRNFLWG      +I  VNWD+V +
Sbjct: 313  GGRISLINSVLSAMPIYLLSFFKIPKKVVQKAVSIQRNFLWGRGVEAARIAWVNWDTVCL 372

Query: 848  PKHLGGLGIFKTTGKISPSLL 786
            PK  GGLGI K   K + +LL
Sbjct: 373  PKSKGGLGI-KDLTKFNEALL 392


>emb|CAB78008.1| putative protein [Arabidopsis thaliana] gi|7321072|emb|CAB82119.1|
            putative protein [Arabidopsis thaliana]
          Length = 947

 Score = 87.4 bits (215), Expect(2) = 1e-25
 Identities = 70/259 (27%), Positives = 105/259 (40%), Gaps = 4/259 (1%)
 Frame = -3

Query: 804  NLSLLTSLIWRLKNNN-NVWANVLSKKY-LCLRNQNLSNHKPSDSYIWKIISRTFPFFAN 631
            N +L++ + WRL N+  ++WA +L  KY + LR               +++SR       
Sbjct: 539  NKALVSKVGWRLINDRYSLWARILRSKYRVGLR---------------EVVSR------- 576

Query: 630  GISWCEGLGNNINLWSDNWIEPSRSL-REVIHGPLNSSDLNLDVSNILANN-EWDLSCLS 457
            G  W  G G +I  WSDNW+     + R VI  P  +S+  L V ++ AN   W L  + 
Sbjct: 577  GSRWVVGNGRDILFWSDNWLSHEALINRAVIEIP--NSEKELRVKDLWANGLGWKLDKIE 634

Query: 456  FEFPQSILNSIRNTYTQSYNPKNDSYFWNYSSDGSFNTKSAYALYLSSLKPS*NSITSQF 277
                      +      S     D   W YS+DG F  KSAY L      P  N + + F
Sbjct: 635  PYISYHTRLELAAVVVDSVTGARDRLSWGYSADGVFTVKSAYRLLTEDHDPRPN-MAAFF 693

Query: 276  NWAWKIQATNRIKFFMWLLLNNKLPTAFSLFFRNIIPSKYCASCTNIEEDTCHIFVSCPD 97
            +  W++ A  R+K F+W                +I  +  C  C   +E   H+   CP 
Sbjct: 694  DRLWRVVALERVKTFLW----------------HIGDTSVCQVCKGGDETILHVLKDCPS 737

Query: 96   AVPIWNHFAIAIPTHDFLN 40
               IW        ++DF N
Sbjct: 738  IAGIWRRLVQVQRSYDFFN 756



 Score = 57.4 bits (137), Expect(2) = 1e-25
 Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 11/76 (14%)
 Frame = -1

Query: 1016 RGESMSYI------KSILASIPTYAIS-----QTNRNRIDRIQRNFLWGSTTNKKKIHLV 870
            +G S+S+       KS+L+ IP + +S     Q+    +D++ R FL GS+  KKK+HLV
Sbjct: 457  KGRSLSFAGRLTLTKSVLSLIPIHTMSTISLPQSTLEGLDKLARVFLLGSSAEKKKLHLV 516

Query: 869  NWDSVNMPKHLGGLGI 822
             WD V +PK  GGLGI
Sbjct: 517  AWDRVCLPKSEGGLGI 532


>ref|XP_002453810.1| hypothetical protein SORBIDRAFT_04g018371 [Sorghum bicolor]
           gi|241933641|gb|EES06786.1| hypothetical protein
           SORBIDRAFT_04g018371 [Sorghum bicolor]
          Length = 498

 Score = 90.9 bits (224), Expect(2) = 1e-25
 Identities = 64/255 (25%), Positives = 108/255 (42%), Gaps = 10/255 (3%)
 Frame = -3

Query: 804 NLSLLTSLIWRLK-NNNNVWANVLSKKYLCLRNQNLSNHKPSDSYIWKIISRTFPFFANG 628
           NL+LL+S I+R   NN+++W  ++  KY   +       K   S  WK +         G
Sbjct: 136 NLALLSSWIFRYHLNNDSIWTKIVDFKYKTKKPNIFCCSKVGTSPFWKGVIWAMQAAHMG 195

Query: 627 ISWCEGLGNNINLWSDNWIEPSRSLREVIHGPLNSSDLNLDVSNILANNEWDLSCLSFEF 448
           + W  G G+ I  W D W+    +   ++  PL   +   +         W+   L   F
Sbjct: 196 VRWVIGNGDKIRFWEDQWL--GNTCLAILFWPLYVIN---EQHGKTVREVWNGEELQLSF 250

Query: 447 PQSILNSIRNTYTQ--------SYNPKNDSYFWNYSSDGSFNTKSAYALYLSSLKPS*NS 292
            + +   I   + +        + N + D   W YSS G ++ +S YA+       +   
Sbjct: 251 RRDVSKRIMGLWEELKAAVQSITLNNEEDQILWTYSSSGKYSVQSLYAIV------NHRG 304

Query: 291 ITSQFNWA-WKIQATNRIKFFMWLLLNNKLPTAFSLFFRNIIPSKYCASCTNIEEDTCHI 115
           +   F  A WK+    R++FF+WLL NN++ T  +L  R  +    C  C N +E   H+
Sbjct: 305 VVPIFVHAVWKLNIPPRVQFFLWLLSNNRVLTRDNLAKRREVNDPTCLFC-NEKESITHL 363

Query: 114 FVSCPDAVPIWNHFA 70
           F  C  A  +W + +
Sbjct: 364 FFQCCVARNVWEYIS 378



 Score = 53.9 bits (128), Expect(2) = 1e-25
 Identities = 35/83 (42%), Positives = 43/83 (51%), Gaps = 11/83 (13%)
 Frame = -1

Query: 1037 IKLHGSCRGESMSY------IKSILASIPTYAISQTNRNR--IDRIQRN---FLWGSTTN 891
            IK     +G  +SY      +KS LASIP Y +S     R  ID I  +   F+W +T  
Sbjct: 47   IKRIAGWKGRLLSYAGRLVLLKSCLASIPIYLLSVIKFPRWAIDMINSHMGHFIWNNTEK 106

Query: 890  KKKIHLVNWDSVNMPKHLGGLGI 822
            K K HL NW  V+  K LGGLGI
Sbjct: 107  KHKYHLANWQLVSQEKDLGGLGI 129


>ref|XP_006588248.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
           max]
          Length = 434

 Score = 86.3 bits (212), Expect(2) = 1e-25
 Identities = 70/246 (28%), Positives = 99/246 (40%), Gaps = 18/246 (7%)
 Frame = -3

Query: 765 NNNNVWANVLSKKYLCLRNQNLSNHKPSDSYIWKIISRTFP-----FFANGISWCEGLGN 601
           N + +WA +L  KY          +K   S  WK +   F        +N + W  G GN
Sbjct: 91  NQDQLWARILMSKYGGWNTLCCGRNKADYSPWWKDLKNVFQPHHRNCISNNLKWKLGDGN 150

Query: 600 NINLWSDNWIEPSR-SLRE---VIHGPLNSSDLNLDVSNILA--NNEWDLSCLSFEFPQS 439
            I  W D W E    SL+E    +       + N++   IL+  N EW +      F   
Sbjct: 151 TIKFWKDKWREEDDLSLQEKYPTLFQVSTQQNQNINSMGILSGSNWEWKIQWRRHFFDHE 210

Query: 438 I------LNSIRNTYTQSYNPKNDSYFWNYSSDGSFNTKSAYALYLSSLKPS*NSITSQF 277
           I      + +I     Q      D   W     G ++TKSAY L  +  + S NS  S +
Sbjct: 211 IDTLAAFMANIEGIQIQPLT--RDFLSWGADPAGYYSTKSAYNLLKA--EASSNSKDSNY 266

Query: 276 NWAWKIQATNRIKFFMWLLLNNKLPTAFSLFFRNI-IPSKYCASCTNIEEDTCHIFVSCP 100
              WK+Q   R   F W +  N+LPT  +L  R++ +PS  C  C   EE   HI  SC 
Sbjct: 267 KTIWKLQIPPRASAFSWRIFKNRLPTRDNLRRRHVELPSYNCLLCDQEEETVDHIMYSCR 326

Query: 99  DAVPIW 82
               +W
Sbjct: 327 KTCVLW 332



 Score = 58.5 bits (140), Expect(2) = 1e-25
 Identities = 32/81 (39%), Positives = 49/81 (60%), Gaps = 5/81 (6%)
 Frame = -1

Query: 1013 GESMSYIKSILASIPTYAIS-----QTNRNRIDRIQRNFLWGSTTNKKKIHLVNWDSVNM 849
            G  ++ I S+L ++P Y +S     +   +++  IQRNFLWG  +   KI  VNWD++ +
Sbjct: 2    GGRITVINSVLTALPIYMLSFFRVPKKVVHKLVSIQRNFLWGGDSEVAKIAWVNWDTICL 61

Query: 848  PKHLGGLGIFKTTGKISPSLL 786
            PK+ GGLGI K   K + +LL
Sbjct: 62   PKNRGGLGI-KDLAKFNEALL 81