BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00038763
         (763 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004253520.1| PREDICTED: putative ribonuclease H protein A...   125   2e-26
ref|XP_004253405.1| PREDICTED: putative ribonuclease H protein A...   117   3e-24
ref|XP_004248595.1| PREDICTED: uncharacterized protein LOC101261...   114   3e-23
ref|XP_006367184.1| PREDICTED: uncharacterized protein LOC102601...   114   5e-23
ref|XP_004253443.1| PREDICTED: putative ribonuclease H protein A...   114   5e-23
ref|XP_004253442.1| PREDICTED: putative ribonuclease H protein A...   113   6e-23
ref|XP_004253259.1| PREDICTED: putative ribonuclease H protein A...   112   1e-22
ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258...   111   3e-22
gb|ABI34321.1| RNase H family protein [Solanum demissum]              105   1e-20
ref|XP_004228797.1| PREDICTED: putative ribonuclease H protein A...   104   3e-20
ref|XP_004253445.1| PREDICTED: putative ribonuclease H protein A...   103   8e-20
ref|XP_004253498.1| PREDICTED: putative ribonuclease H protein A...   102   1e-19
ref|XP_004233578.1| PREDICTED: putative ribonuclease H protein A...   102   1e-19
ref|XP_004253275.1| PREDICTED: uncharacterized protein LOC101268...   102   1e-19
ref|XP_004244918.1| PREDICTED: putative ribonuclease H protein A...   102   1e-19
ref|XP_004253338.1| PREDICTED: putative ribonuclease H protein A...   100   9e-19
ref|XP_004237273.1| PREDICTED: putative ribonuclease H protein A...    97   5e-18
ref|XP_004248946.1| PREDICTED: putative ribonuclease H protein A...    95   2e-17
ref|XP_004239568.1| PREDICTED: putative ribonuclease H protein A...    92   1e-16
ref|XP_004243166.1| PREDICTED: putative ribonuclease H protein A...    92   2e-16

>ref|XP_004253520.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 468

 Score =  125 bits (313), Expect = 2e-26
 Identities = 79/255 (30%), Positives = 128/255 (50%), Gaps = 2/255 (0%)
 Frame = -3

Query: 761 RNKKSHATIDAKL*HKDILYKMSCISRRPIHYKIPTDDKVAKKFKVDLVFKYFCCVGAGM 582
           RNKK+    ++ L HK I +K S +  R +  K+PT++K++  F ++ +  + C   AGM
Sbjct: 103 RNKKAKNFFNSALWHKFIPFKTSFLLWRTLKGKLPTNEKLSN-FGIEPLPCFCCFDRAGM 161

Query: 581 MPERETAEHLFCSGHFP*IIWDNFAGGMGTNTSNTNLRDLLNRCWNSKARNPITSYVLKI 402
               +T EH+F SG F  I+W+ FA   G    ++ L  L+ + W +K  N     +L+ 
Sbjct: 162 ----DTIEHIFNSGPFATIVWNFFAATAGIQADHSTLPALIKQWWTTKPNNAGHKLLLQA 217

Query: 401 LPPIITWELWRLRCCSRYEDERPFIMRSKTLITFNICQLTKITFTKLEIPIEWDILLTLM 222
            P  I W LW+ RC  +Y  +   I R K  I  +  ++ K +F  +  P  W  L+   
Sbjct: 218 TPIFICWNLWKNRCACKYGGKGTNISRVKYAIYKDTFKMLKNSFPSINWPANWTTLILTS 277

Query: 221 EMNLNDTSSISVMWIKPLLLFVKMN--XXXXXXXXXXXXXGIVRDSTGRCIMAFILHLGD 48
           E  +++     V W KP   ++K+N               GI+RD  G+ IMAF   LG+
Sbjct: 278 EKCVHNIKVYKVTWFKPPDQWIKINTDGSALTNEGKIGAGGIIRDKEGKMIMAFSTPLGE 337

Query: 47  GTSNTAEAKTFIFGI 3
           G++N AE +  +FG+
Sbjct: 338 GSNNQAEIEAALFGL 352


>ref|XP_004253405.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 375

 Score =  117 bits (294), Expect = 3e-24
 Identities = 74/255 (29%), Positives = 124/255 (48%), Gaps = 2/255 (0%)
 Frame = -3

Query: 761 RNKKSHATIDAKL*HKDILYKMSCISRRPIHYKIPTDDKVAKKFKVDLVFKYFCCVGAGM 582
           RNKK+    ++ L H  I +K S +  R +  K+PT++K++  F ++     FCCV    
Sbjct: 35  RNKKAKHKFNSLLWHNFIPFKSSFLLWRVLKGKLPTNEKLSN-FSIE-PSSCFCCVDRTR 92

Query: 581 MPERETAEHLFCSGHFP*IIWDNFAGGMGTNTSNTNLRDLLNRCWNSKARNPITSYVLKI 402
           M   ++ EH F SG F   +W  F    G     ++++  L + W ++ RN     +L+ 
Sbjct: 93  M---DSIEHTFNSGSFATKVWRAFTTTAGLQEDQSSVQARLRQWWTARPRNASHQLLLQA 149

Query: 401 LPPIITWELWRLRCCSRYEDERPFIMRSKTLITFNICQLTKITFTKLEIPIEWDILLTLM 222
           +P  I W LW+ RC  +Y  +   I R K  +  +  ++ KI F ++  P  W  L+   
Sbjct: 150 MPIFIVWNLWKNRCACKYGGKSTNISRVKYAVYKDTFKMLKIAFPRVNWPGNWAALIQTA 209

Query: 221 EMNLNDTSSISVMWIKPLLLFVKMN--XXXXXXXXXXXXXGIVRDSTGRCIMAFILHLGD 48
           E   ++       W +P   ++K+N               GI+RD  G+ ++AF   LGD
Sbjct: 210 ERCKHEIKVCMTTWNRPPEQWIKINTDGSALINTGHCGAGGIIRDKEGKMVLAFATPLGD 269

Query: 47  GTSNTAEAKTFIFGI 3
           GT+N AEA+  +FG+
Sbjct: 270 GTNNKAEAEAALFGL 284


>ref|XP_004248595.1| PREDICTED: uncharacterized protein LOC101261371 [Solanum
            lycopersicum]
          Length = 1246

 Score =  114 bits (286), Expect = 3e-23
 Identities = 75/255 (29%), Positives = 125/255 (49%), Gaps = 2/255 (0%)
 Frame = -3

Query: 761  RNKKSHATIDAKL*HKDILYKMSCISRRPIHYKIPTDDKVAKKFKVDLVFKYFCCVGAGM 582
            RNK+   TI+  + HK + +K++    R +  K+PT++ + ++F    + K +CC   G 
Sbjct: 897  RNKRPIDTINTIIWHKHLPFKIAFFIWRALKGKLPTNE-LLQRFG-SAISKCYCCYSKG- 953

Query: 581  MPERETAEHLFCSGHFP*IIWDNFAGGMGTNTSNTNLRDLLNRCWNSKARNPITSYVLKI 402
               ++   H+  +G+F   IW   A  +G   +NT LRD L    N +  N +   ++ I
Sbjct: 954  ---KDDINHILINGNFAKHIWKIHAAILGVVPANTTLRDQLLHWRNQQVNNEVHKLLIHI 1010

Query: 401  LPPIITWELWRLRCCSRYEDERPFIMRSKTLITFNICQLTKITFTKLEIPIEWDILLTLM 222
            LP +I W LW+ RC  +Y ++   I R +  I  ++ Q+ KI F  +     W+ L+ ++
Sbjct: 1011 LPNVICWNLWKNRCAVKYGNKSSSIHRVQYGIFKDVMQVIKIVFPSIPWQSSWNKLINIV 1070

Query: 221  EMNLNDTSSISVMWIKPLLLFVKMN--XXXXXXXXXXXXXGIVRDSTGRCIMAFILHLGD 48
            E        + V W KP L   K+N               GI+RD  G+ + AF L  G 
Sbjct: 1071 EHCKQQYKIVLVSWNKPGLGTYKLNTDGSALQNSGKIGGGGILRDHQGKIVYAFSLPFGF 1130

Query: 47   GTSNTAEAKTFIFGI 3
            GT+N AE K  ++G+
Sbjct: 1131 GTNNIAEIKAALYGL 1145


>ref|XP_006367184.1| PREDICTED: uncharacterized protein LOC102601483 [Solanum tuberosum]
          Length = 2019

 Score =  114 bits (284), Expect = 5e-23
 Identities = 75/255 (29%), Positives = 117/255 (45%), Gaps = 2/255 (0%)
 Frame = -3

Query: 761  RNKKSHATIDAKL*HKDILYKMSCISRRPIHYKIPTDDKVAKKFKVDLVFKYFCCVGAGM 582
            R K+    I+    H  I +K S +  R I  K+PT++K+   F ++      CC   G+
Sbjct: 883  REKREITKINKYTWHPKIPFKCSFLLWRAIRGKLPTNEKLLS-FGIE-PSDCHCCHSPGI 940

Query: 581  MPERETAEHLFCSGHFP*IIWDNFAGGMGTNTSNTNLRDLLNRCWNSKARNPITSYVLKI 402
                +T EH   SG F   +W  FA  +G  T    LR+++ R W++   N     +L  
Sbjct: 941  ----DTIEHTLNSGDFAKNVWKYFAISLGIRTDFLPLRNMIMRWWSAPHNNEAHKLILHS 996

Query: 401  LPPIITWELWRLRCCSRYEDERPFIMRSKTLITFNICQLTKITFTKLEIPIEWDILLTLM 222
             P  I W LW+ RC  +Y  ++  I R K L+  +  +L    F  +  P+ W+    ++
Sbjct: 997  TPIFICWNLWKNRCAVKYGGKQSNIARVKHLVILDNFKLLHTVFPYISWPLRWNKFCNVI 1056

Query: 221  EMNLNDTSSISVMWIKPLLLFVKMN--XXXXXXXXXXXXXGIVRDSTGRCIMAFILHLGD 48
            E    DT   +V W KP   +VK+N                ++R+  G  I+A+   LG 
Sbjct: 1057 ENCSQDTKVTAVQWTKPPYRWVKLNTDGSALSNPGSIGAGDVIRNHLGEIILAYSTPLGT 1116

Query: 47   GTSNTAEAKTFIFGI 3
            GT+N AE +  IFGI
Sbjct: 1117 GTNNQAEVEAAIFGI 1131



 Score =  107 bits (267), Expect = 4e-21
 Identities = 65/205 (31%), Positives = 103/205 (50%)
 Frame = -3

Query: 761  RNKKSHATIDAKL*HKDILYKMSCISRRPIHYKIPTDDKVAKKFKVDLVFKYFCCVGAGM 582
            R K++    +  + HK I +K S +  R +  K+PT++K+   F  +    + CC  +G+
Sbjct: 586  REKRTKTIFNTFIWHKSIPFKTSFLLWRTLRGKLPTNEKLIS-FGNEPANCFCCCNRSGL 644

Query: 581  MPERETAEHLFCSGHFP*IIWDNFAGGMGTNTSNTNLRDLLNRCWNSKARNPITSYVLKI 402
                +T EH F  G F   +W +FA   G  T + +L  L+ + W++K  N     +L+ 
Sbjct: 645  ----DTIEHTFNKGQFATYLWKSFAAAAGIITYHNSLPQLIMQWWSTKHNNAAYRLILQA 700

Query: 401  LPPIITWELWRLRCCSRYEDERPFIMRSKTLITFNICQLTKITFTKLEIPIEWDILLTLM 222
             P  I W LW+ RC S+Y  ++  I R K  I  +  +L   TF +++ P  W  LL L 
Sbjct: 701  TPIFICWNLWKNRCASKYGGKQSNISRVKYAIYKDNYKLMTTTFPQIKWPSNWMELLQLG 760

Query: 221  EMNLNDTSSISVMWIKPLLLFVKMN 147
            E   +DT    V WIKP   +VK+N
Sbjct: 761  ERCTHDTKVTMVKWIKPKKQWVKIN 785


>ref|XP_004253443.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 775

 Score =  114 bits (284), Expect = 5e-23
 Identities = 74/255 (29%), Positives = 123/255 (48%), Gaps = 2/255 (0%)
 Frame = -3

Query: 761  RNKKSHATIDAKL*HKDILYKMSCISRRPIHYKIPTDDKVAKKFKVDLVFKYFCCVGAGM 582
            RNKK+     + L H  I +K S +  R +  KIPT++K+   F ++    Y C   AGM
Sbjct: 410  RNKKAKNRFLSFLWHNFIPFKTSFLLWRILKGKIPTNEKLTN-FGIEPSPCYCCVDRAGM 468

Query: 581  MPERETAEHLFCSGHFP*IIWDNFAGGMGTNTSNTNLRDLLNRCWNSKARNPITSYVLKI 402
                ++  H+F +G+F   +W +FA G G       L+  L + W +K+ N     +L+ 
Sbjct: 469  ----DSINHIFNTGNFAGRVWKSFAAGAGLQEDQQTLQARLKQWWTAKSCNAGHQLLLQA 524

Query: 401  LPPIITWELWRLRCCSRYEDERPFIMRSKTLITFNICQLTKITFTKLEIPIEWDILLTLM 222
             P  I W LW+ RC  +Y  +   I R K ++  +  ++ K  F  ++ P  W  L+   
Sbjct: 525  TPIFICWNLWKNRCACKYGGKATNISRVKYVVYKDNFKMMKNAFPHIQWPAHWTALIHTS 584

Query: 221  EMNLNDTSSISVMWIKPLLLFVKMN--XXXXXXXXXXXXXGIVRDSTGRCIMAFILHLGD 48
            E   +DT    V+W +P   ++K+N               GI+R+  G+ +MAF   LG+
Sbjct: 585  EKCKHDTKVCQVVWNRPPEEWIKINTDGSALTNPGKIGAGGIIRNKEGKLVMAFATSLGE 644

Query: 47   GTSNTAEAKTFIFGI 3
            GT N A+ +  + G+
Sbjct: 645  GTKNKAKTEAALIGL 659


>ref|XP_004253442.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 775

 Score =  113 bits (283), Expect = 6e-23
 Identities = 74/255 (29%), Positives = 123/255 (48%), Gaps = 2/255 (0%)
 Frame = -3

Query: 761  RNKKSHATIDAKL*HKDILYKMSCISRRPIHYKIPTDDKVAKKFKVDLVFKYFCCVGAGM 582
            RNKK+     + L H  I +K S +  R +  KIPT++K+   F ++    Y C   AGM
Sbjct: 410  RNKKAKNRFLSFLWHNFIPFKTSFLLWRILKGKIPTNEKLTN-FGIEPSPCYCCVDRAGM 468

Query: 581  MPERETAEHLFCSGHFP*IIWDNFAGGMGTNTSNTNLRDLLNRCWNSKARNPITSYVLKI 402
                ++  H+F +G+F   +W +FA G G       L+  L + W +K+ N     +L+ 
Sbjct: 469  ----DSINHIFNTGNFAGRVWKSFAAGAGLQQDQQTLQARLKQWWTAKSCNAGHQLLLQA 524

Query: 401  LPPIITWELWRLRCCSRYEDERPFIMRSKTLITFNICQLTKITFTKLEIPIEWDILLTLM 222
             P  I W LW+ RC  +Y  +   I R K  +  +  ++ K  F  ++ P  W  L+   
Sbjct: 525  TPIFICWNLWKNRCACKYGGKATNISRVKYAVYKDNFKMMKNAFPHIQWPAHWTALIHTS 584

Query: 221  EMNLNDTSSISVMWIKPLLLFVKMN--XXXXXXXXXXXXXGIVRDSTGRCIMAFILHLGD 48
            E   +DT    V+W +P   ++K+N               GI+R+  G+ +MAF   LG+
Sbjct: 585  EKCKHDTKVCQVVWNRPPEEWIKINTDGSALTNPGNIGAGGIIRNKEGKLVMAFATSLGE 644

Query: 47   GTSNTAEAKTFIFGI 3
            G++N AE +  + G+
Sbjct: 645  GSNNKAETEAALIGL 659


>ref|XP_004253259.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 668

 Score =  112 bits (281), Expect = 1e-22
 Identities = 74/255 (29%), Positives = 122/255 (47%), Gaps = 2/255 (0%)
 Frame = -3

Query: 761  RNKKSHATIDAKL*HKDILYKMSCISRRPIHYKIPTDDKVAKKFKVDLVFKYFCCVGAGM 582
            RNKK+    ++ L H  I +K S +  R +  K+PT++K++  F ++     FCCV    
Sbjct: 306  RNKKAKHKFNSLLWHNFIPFKSSFLLWRVLKGKLPTNEKLSN-FGIE-PSSCFCCVDRTG 363

Query: 581  MPERETAEHLFCSGHFP*IIWDNFAGGMGTNTSNTNLRDLLNRCWNSKARNPITSYVLKI 402
            M   ++ EH F SG F   +W  F    G     ++++  L + W ++ RN     +L+ 
Sbjct: 364  M---DSIEHTFNSGSFATRVWRAFTTTAGLQEDQSSVQARLRQWWTARLRNASHQLLLQA 420

Query: 401  LPPIITWELWRLRCCSRYEDERPFIMRSKTLITFNICQLTKITFTKLEIPIEWDILLTLM 222
            +P  I W LW+ RC  +Y  +   I R K  I  +  ++ K  F  +  P  W  L+   
Sbjct: 421  MPIFIVWNLWKNRCACKYGGKSTNISRVKYAIYKDTFKMLKSAFPCINWPGNWAALIQTA 480

Query: 221  EMNLNDTSSISVMWIKPLLLFVKMN--XXXXXXXXXXXXXGIVRDSTGRCIMAFILHLGD 48
            E   ++       W +P   ++K+N               GI+RD  G+ ++AF   LGD
Sbjct: 481  ERCKHEIKVCMTTWNRPPEQWIKINTDGSALINTGHCGAGGIIRDKEGKIVLAFATPLGD 540

Query: 47   GTSNTAEAKTFIFGI 3
            GT+N AEA+  +FG+
Sbjct: 541  GTNNKAEAEAALFGL 555


>ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258077 [Solanum
            lycopersicum]
          Length = 1454

 Score =  111 bits (277), Expect = 3e-22
 Identities = 76/255 (29%), Positives = 121/255 (47%), Gaps = 2/255 (0%)
 Frame = -3

Query: 761  RNKKSHATIDAKL*HKDILYKMSCISRRPIHYKIPTDDKVAKKFKVDLVFKYFCCVGAGM 582
            R K++   I+  + HK I +K+S    R +  K+PT++ + +  K   +   +CC   G 
Sbjct: 1090 RKKRNKDPINNIIWHKQIPFKVSFFIWRALRGKLPTNENLQRIGKN--LSDCYCCYNKG- 1146

Query: 581  MPERETAEHLFCSGHFP*IIWDNFAGGMGTNTSNTNLRDLLNRCWNSKARNPITSYVLKI 402
               ++   H+  +G+F   IW  ++  +G    NT LRDLL +  N +  N +   ++ I
Sbjct: 1147 ---KDDINHILINGNFAKYIWKIYSSAVGVLPINTTLRDLLLQWRNQQYTNEVHKLLIHI 1203

Query: 401  LPPIITWELWRLRCCSRYEDERPFIMRSKTLITFNICQLTKITFTKLEIPIEWDILLTLM 222
            LP  I W LW+ RC  +Y  +   I R +  I  NI Q+  I F  +     W+ L+ ++
Sbjct: 1204 LPNFICWNLWKNRCAVKYGLKNSSIYRVQYGIFKNIMQVITIVFPSIPWQTSWNNLINIV 1263

Query: 221  EMNLNDTSSISVMWIKPLLLFVKMN--XXXXXXXXXXXXXGIVRDSTGRCIMAFILHLGD 48
            E        + V W KP L   K+N               GI+RD+ G+ I AF L  G 
Sbjct: 1264 EQCKQHYKILIVKWNKPDLGKYKLNTDGSALQNSGKIGGGGILRDNQGKIIYAFSLPFGF 1323

Query: 47   GTSNTAEAKTFIFGI 3
            GT+N AE K  + G+
Sbjct: 1324 GTNNFAEIKAALHGL 1338


>gb|ABI34321.1| RNase H family protein [Solanum demissum]
          Length = 945

 Score =  105 bits (263), Expect = 1e-20
 Identities = 72/243 (29%), Positives = 112/243 (46%), Gaps = 1/243 (0%)
 Frame = -3

Query: 728  KL*HKDILYKMSCISRRPIHYKIPTDDKVAKKFKVDLVFKYFCCVGAGMMPERETAEHLF 549
            K+ H    +KMS ++ R +  K+P  D V K F  ++     CC       + ET  H+F
Sbjct: 569  KIWHGKFPFKMSFLTWRLVQNKLPFYDTVGK-FVDNIDSNCVCCKNM----KTETINHVF 623

Query: 548  CSGHFP*IIWDNFAGGMGTNTSNTNLRDLLNRCWNSKARNPITSYVLKILPPIITWELWR 369
             +      +W  F G +G +T  ++  +LL   WN +  N I + ++  LP +I WE+W+
Sbjct: 624  LNSDVASYLWKKFGGTLGIDTRASSTINLLKTWWNVQTHNSIHNVIIHTLPILIFWEIWK 683

Query: 368  LRCCSRYEDERPFIMRS-KTLITFNICQLTKITFTKLEIPIEWDILLTLMEMNLNDTSSI 192
             RC  +Y D++    R+ +  + +N+    ++TF   EI   W  LL  +E         
Sbjct: 684  RRCACKYGDQKKMWYRTMENHVWWNLKMSLRMTFPSFEIGNSWRDLLNKVESLRPYPKWK 743

Query: 191  SVMWIKPLLLFVKMNXXXXXXXXXXXXXGIVRDSTGRCIMAFILHLGDGTSNTAEAKTFI 12
             V W  P +  VK+N              IVRD T R IMAF +     ++N AEA    
Sbjct: 744  IVHWNTPNINCVKINTDGSFSSGNAGLGWIVRDHTRRMIMAFSIPSSCSSNNLAEALAAR 803

Query: 11   FGI 3
            FGI
Sbjct: 804  FGI 806


>ref|XP_004228797.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 389

 Score =  104 bits (260), Expect = 3e-20
 Identities = 74/255 (29%), Positives = 118/255 (46%), Gaps = 2/255 (0%)
 Frame = -3

Query: 761 RNKKSHATIDAKL*HKDILYKMSCISRRPIHYKIPTDDKVAKKFKVDLVFKYFCCVGAGM 582
           R KK    I   + HK++ +K S    R +  K+PT++ + K  K +L  + +CC   G 
Sbjct: 25  RKKKDPDPIHNCVWHKNVPFKTSFFIWRALRSKLPTNENLLKFGKEEL--ECYCCYRKG- 81

Query: 581 MPERETAEHLFCSGHFP*IIWDNFAGGMGTNTSNTNLRDLLNRCWNSKARNPITSYVLKI 402
              ++  +H+  +G+F   IW      +G    NTNLR  L       + N +   +L I
Sbjct: 82  ---KDDLKHILITGNFAKYIWKIHTKRLGIAIVNTNLRSTLLSWRRLTSYNEVHKLILHI 138

Query: 401 LPPIITWELWRLRCCSRYEDERPFIMRSKTLITFNICQLTKITFTKLEIPIEWDILLTLM 222
           LP II W LW+ RC ++Y ++   I R ++ I  +I Q+ K  +  +     W+ L  L+
Sbjct: 139 LPNIICWNLWKNRCSAKYGNKPSSIYRVESGIFKDIMQIIKAVYPNIPWQSSWERLFNLV 198

Query: 221 EMNLNDTSSISVMWIKPLLLFVKMN--XXXXXXXXXXXXXGIVRDSTGRCIMAFILHLGD 48
           E          V W +P     K+N               GI+RD  G+ I AF + LG 
Sbjct: 199 EQCQQHLKVTMVNWERPPEGIHKLNTDGSAKHNTGKIGGGGILRDHQGKLIYAFAIPLGF 258

Query: 47  GTSNTAEAKTFIFGI 3
           GT+N AE +  + G+
Sbjct: 259 GTNNFAEIQAALHGL 273


>ref|XP_004253445.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 338

 Score =  103 bits (256), Expect = 8e-20
 Identities = 66/223 (29%), Positives = 105/223 (47%), Gaps = 2/223 (0%)
 Frame = -3

Query: 665 KIPTDDKVAKKFKVDLVFKYFCCVGAGMMPERETAEHLFCSGHFP*IIWDNFAGGMGTNT 486
           K+PT++K+   F ++    + C   AGM    +T +H F SG F   +W  F  G G   
Sbjct: 5   KLPTNEKLTN-FGIEPSPCFCCFDRAGM----DTIDHTFNSGPFAAGVWKAFTAGAGLQA 59

Query: 485 SNTNLRDLLNRCWNSKARNPITSYVLKILPPIITWELWRLRCCSRYEDERPFIMRSKTLI 306
             T L+  L + W ++ RN     +L+  P  I W LW+  C  +Y      I R K  +
Sbjct: 60  DRTPLQAKLRQWWTARPRNEGHQLLLQATPVFIVWNLWKNICACKYGGTSTNISRVKYAV 119

Query: 305 TFNICQLTKITFTKLEIPIEWDILLTLMEMNLNDTSSISVMWIKPLLLFVKMN--XXXXX 132
             +  ++ K+ F  +  P  W  L+   E   ++     V W +P   ++K+N       
Sbjct: 120 YKDTFKMLKMAFPHINWPGSWAALVQKAENCKHEIQVSMVTWNRPSEQWIKINTDGSALT 179

Query: 131 XXXXXXXXGIVRDSTGRCIMAFILHLGDGTSNTAEAKTFIFGI 3
                   GI+RD  G+ +MAF   LG+GT+NTAEA+  +FG+
Sbjct: 180 NPGQTGAGGILRDKEGKMVMAFATPLGEGTNNTAEAEAVLFGL 222


>ref|XP_004253498.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 308

 Score =  102 bits (255), Expect = 1e-19
 Identities = 56/191 (29%), Positives = 92/191 (48%), Gaps = 2/191 (1%)
 Frame = -3

Query: 569 ETAEHLFCSGHFP*IIWDNFAGGMGTNTSNTNLRDLLNRCWNSKARNPITSYVLKILPPI 390
           ++ +H+F +G F   +W +FA   G     T L+  L + W +  RN     +L+  P  
Sbjct: 2   DSIDHIFSTGKFAGTVWKSFAASAGLQHDQTTLQARLEKWWTANPRNEGHQLLLQATPIF 61

Query: 389 ITWELWRLRCCSRYEDERPFIMRSKTLITFNICQLTKITFTKLEIPIEWDILLTLMEMNL 210
           I W LW+ RC S+Y  +  +I R K  I  +  ++ K  F  +  P  W  L+T  E   
Sbjct: 62  ICWNLWKNRCASKYGGKATYISRVKYAIYKDNFKMMKNAFPHINWPAHWTALITTSERCK 121

Query: 209 NDTSSISVMWIKPLLLFVKMN--XXXXXXXXXXXXXGIVRDSTGRCIMAFILHLGDGTSN 36
           ++     V W +P   ++K+N               GI+RD  G+ I+AF   LG+G++N
Sbjct: 122 HEIKVCKVTWNRPPEEWIKINTDGSALTNPGKIGAGGIIRDKDGKLILAFATSLGEGSNN 181

Query: 35  TAEAKTFIFGI 3
            AE +  +FG+
Sbjct: 182 KAETEAALFGL 192


>ref|XP_004233578.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 955

 Score =  102 bits (255), Expect = 1e-19
 Identities = 77/255 (30%), Positives = 116/255 (45%), Gaps = 2/255 (0%)
 Frame = -3

Query: 761  RNKKSHATIDAKL*HKDILYKMSCISRRPIHYKIPTDDKVAKKFKVDLVFKYFCCVGAGM 582
            R KKS   I+  + HK I +K+S    R +  K+PT D + +KF  +    Y CC   G+
Sbjct: 591  RKKKSTDIINNSVWHKHIPFKISFFIWRALRGKLPTYDYL-QKFGSNATDCY-CCNRKGI 648

Query: 581  MPERETAEHLFCSGHFP*IIWDNFAGGMGTNTSNTNLRDLLNRCWNSKARNPITSYVLKI 402
                +   H+  +G+F   IW  +A   G    N +LR LL +  N  + N +   ++ I
Sbjct: 649  ----DDINHILITGNFANYIWKYYAPTFGITQINIDLRSLLLQWTNLPSSNQVYKLLISI 704

Query: 401  LPPIITWELWRLRCCSRYEDERPFIMRSKTLITFNICQLTKITFTKLEIPIEWDILLTLM 222
            LP  I W LW+  C  +Y ++   I R +  I  ++ Q  KI F  +     W  L+ L+
Sbjct: 705  LPNFICWHLWKNMCAVKYGNKISSIQRVQYGIFKDVMQTIKIVFPNIPWQHSWYRLINLV 764

Query: 221  EMNLNDTSSISVMWIKPLLLFVKMN--XXXXXXXXXXXXXGIVRDSTGRCIMAFILHLGD 48
            E        I V W KP     K+N               GI+RD TG+   AF +  G 
Sbjct: 765  EQCQQQLKVIMVSWRKPQFGIYKLNTDGSALPESGKIGGGGILRDYTGKLHYAFSIPFGL 824

Query: 47   GTSNTAEAKTFIFGI 3
            GT+N AE +   +G+
Sbjct: 825  GTNNIAEMEAARYGL 839


>ref|XP_004253275.1| PREDICTED: uncharacterized protein LOC101268853 [Solanum
            lycopersicum]
          Length = 1333

 Score =  102 bits (254), Expect = 1e-19
 Identities = 72/255 (28%), Positives = 117/255 (45%), Gaps = 2/255 (0%)
 Frame = -3

Query: 761  RNKKSHATIDAKL*HKDILYKMSCISRRPIHYKIPTDDKVAKKFKVDLVFKYFCCVGAGM 582
            R K+    I   + HK + +K++    R +  K+PT++ + ++   D +  Y CC   G 
Sbjct: 969  RKKRIIDNISTIIWHKHLPFKIAFFIWRALKGKLPTNEFL-QRIGSD-ISDYSCCYRKG- 1025

Query: 581  MPERETAEHLFCSGHFP*IIWDNFAGGMGTNTSNTNLRDLLNRCWNSKARNPITSYVLKI 402
               ++   H+  +G+F   IW   A  +G    NT LR  L    N +  N +   ++ I
Sbjct: 1026 ---KDDINHILINGNFAKYIWKIHAATLGIIPVNTTLRAQLLHWRNQQVNNEVHKLLIHI 1082

Query: 401  LPPIITWELWRLRCCSRYEDERPFIMRSKTLITFNICQLTKITFTKLEIPIEWDILLTLM 222
            LP II W LW+ RC  +Y  +R  I R K  I   + Q+ K+ F  +     W+ L+ ++
Sbjct: 1083 LPNIICWNLWKNRCAVKYGKKRSSIHRVKYGIFKEVMQVIKLVFPSIPWQSNWNNLVNII 1142

Query: 221  EMNLNDTSSISVMWIKPLLLFVKMN--XXXXXXXXXXXXXGIVRDSTGRCIMAFILHLGD 48
            E        + V W KP L   K+N               G +RD  G+ + AF +  G 
Sbjct: 1143 EHCSQQYKIVLVSWNKPALGTYKLNTDGSAIQNSGKIGGGGNLRDFQGKIVYAFSIPFGV 1202

Query: 47   GTSNTAEAKTFIFGI 3
            GT+N AE K  ++G+
Sbjct: 1203 GTNNFAEIKAALYGM 1217


>ref|XP_004244918.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 1010

 Score =  102 bits (254), Expect = 1e-19
 Identities = 72/255 (28%), Positives = 115/255 (45%), Gaps = 2/255 (0%)
 Frame = -3

Query: 761  RNKKSHATIDAKL*HKDILYKMSCISRRPIHYKIPTDDKVAKKFKVDLVFKYFCCVGAGM 582
            R K     I+  + HK+I +K+S    + +  K+PT+D +   F +D   + +CC   G 
Sbjct: 646  RKKNISDPINQFIWHKNIPFKVSFFIWKALRNKLPTNDSLMN-FGMDEQ-ECYCCFRKG- 702

Query: 581  MPERETAEHLFCSGHFP*IIWDNFAGGMGTNTSNTNLRDLLNRCWNSKARNPITSYVLKI 402
               ++   H+  +G+F   IW   A  +G +  + NLR LL    N    N +   + +I
Sbjct: 703  ---KDDILHILITGNFAKYIWKIHATRLGVHQDHANLRSLLLHWRNIPVHNQVQKLLYQI 759

Query: 401  LPPIITWELWRLRCCSRYEDERPFIMRSKTLITFNICQLTKITFTKLEIPIEWDILLTLM 222
            LP  I W LW+ RC  ++  ++    R +  I  +  Q   + F  +      D+L+ L 
Sbjct: 760  LPNFICWNLWKNRCAVKHGSKQCSTQRVQYAIFKDTMQAVMVAFPNISRQNNLDMLINLA 819

Query: 221  EMNLNDTSSISVMWIKPLLLFVKMN--XXXXXXXXXXXXXGIVRDSTGRCIMAFILHLGD 48
            E          VMW KP L   K+N               GI+RD  G+ I AF +  G 
Sbjct: 820  ENCQQQVKVTKVMWEKPSLGIFKLNTDGSAIHNINKIGGGGILRDHNGKLIYAFAIPFGI 879

Query: 47   GTSNTAEAKTFIFGI 3
            GT+N AE K  ++G+
Sbjct: 880  GTNNFAEMKAALYGL 894


>ref|XP_004253338.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 655

 Score = 99.8 bits (247), Expect = 9e-19
 Identities = 69/255 (27%), Positives = 115/255 (45%), Gaps = 2/255 (0%)
 Frame = -3

Query: 761  RNKKSHATIDAKL*HKDILYKMSCISRRPIHYKIPTDDKVAKKFKVDLVFKYFCCVGAGM 582
            R K+    I   + +K + +K++    R +  K+PT++ + +      +    CC   G 
Sbjct: 351  RKKRIIDNISTIIWNKHLPFKIAFFIWRALKGKLPTNEFLQRIGSN--ISDCSCCYRKG- 407

Query: 581  MPERETAEHLFCSGHFP*IIWDNFAGGMGTNTSNTNLRDLLNRCWNSKARNPITSYVLKI 402
               ++   H+  +G+F   IW   A  +G    NTNLR  L    N K  N +   ++ I
Sbjct: 408  ---KDDINHILINGNFAKYIWKIHAATLGIIPVNTNLRAQLLHWRNQKVNNEVHKLLIHI 464

Query: 401  LPPIITWELWRLRCCSRYEDERPFIMRSKTLITFNICQLTKITFTKLEIPIEWDILLTLM 222
            LP +I W LW+ RC  +Y  +R  + R K  I   + Q+ K+ F  +     W+ L+ ++
Sbjct: 465  LPNLICWNLWKNRCAVKYGKKRSNVHRVKYGIFKEVMQIIKLVFPSIPWQANWNNLVNII 524

Query: 221  EMNLNDTSSISVMWIKPLLLFVKMN--XXXXXXXXXXXXXGIVRDSTGRCIMAFILHLGD 48
            E        + V W KP     K+N               GI+RD  G+ + AF +  G 
Sbjct: 525  ENCSQQYKIVLVSWNKPAFGTYKLNTDGSAIQNSGKTGGGGILRDFQGKIVYAFSIPFGV 584

Query: 47   GTSNTAEAKTFIFGI 3
            GT+N AE K  ++G+
Sbjct: 585  GTNNFAEIKAALYGM 599


>ref|XP_004237273.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 601

 Score = 97.4 bits (241), Expect = 5e-18
 Identities = 69/255 (27%), Positives = 115/255 (45%), Gaps = 2/255 (0%)
 Frame = -3

Query: 761 RNKKSHATIDAKL*HKDILYKMSCISRRPIHYKIPTDDKVAKKFKVDLVFKYFCCVGAGM 582
           R K+SH  I+  + HK I +K+S      +  K+PT++ + ++   D+V  Y CC     
Sbjct: 237 RKKRSHDPINNIIWHKHIPFKISFFIWGALTGKLPTNE-ILQRLGRDIVDCY-CCYSK-- 292

Query: 581 MPERETAEHLFCSGHFP*IIWDNFAGGMGTNTSNTNLRDLLNRCWNSKARNPITSYVLKI 402
              ++   H+  +G+F   IW   A  +G    NTN+R  L    + +  N +   ++  
Sbjct: 293 --VKDDINHILLTGNFANYIWKKHASTVGALHVNTNMRSQLLYWRSLQTNNEVHKLLIHT 350

Query: 401 LPPIITWELWRLRCCSRYEDERPFIMRSKTLITFNICQLTKITFTKLEIPIEWDILLTLM 222
           LP II W LW  RC  +Y  ++  I R +  I  +  Q+ K+ ++ +     W  L+  +
Sbjct: 351 LPNIICWNLWENRCAVKYGGKQSSIYRVQYGIFKDTMQIIKLEYSNIPWQYSWGHLINFI 410

Query: 221 EMNLNDTSSISVMWIKPLLLFVKMN--XXXXXXXXXXXXXGIVRDSTGRCIMAFILHLGD 48
           +          V WIKP +   K+N               GI+RD  G  I AF      
Sbjct: 411 DQCQQQYKIFMVRWIKPTIGRYKLNTDGSCLQENGNIEGGGILRDHQGSIIFAFASPFAF 470

Query: 47  GTSNTAEAKTFIFGI 3
           GT+N A+ K  ++G+
Sbjct: 471 GTNNIAKLKAALYGL 485


>ref|XP_004248946.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 622

 Score = 95.1 bits (235), Expect = 2e-17
 Identities = 71/253 (28%), Positives = 110/253 (43%)
 Frame = -3

Query: 761 RNKKSHATIDAKL*HKDILYKMSCISRRPIHYKIPTDDKVAKKFKVDLVFKYFCCVGAGM 582
           RNKK+    ++ L HK I +K S +  R +  K+PT++K++  F ++ +   FCC   G 
Sbjct: 351 RNKKAKNFFNSALWHKFIPFKTSFLLWRTLKGKLPTNEKLSN-FGIEPL-PCFCCFDRGG 408

Query: 581 MPERETAEHLFCSGHFP*IIWDNFAGGMGTNTSNTNLRDLLNRCWNSKARNPITSYVLKI 402
           M   +T EH+F SG F  I+W+ FA   G    ++ L  L+ + W +K  N     +L+ 
Sbjct: 409 M---DTIEHIFNSGPFATIVWNFFAATAGIQADHSTLPALIKQWWTAKPNNAGHKLLLQA 465

Query: 401 LPPIITWELWRLRCCSRYEDERPFIMRSKTLITFNICQLTKITFTKLEIPIEWDILLTLM 222
            P  I W LW+ RC  +Y  +   I R K  I  +  ++ K  F                
Sbjct: 466 TPIFICWNLWKNRCACKYGGKGTNISRVKYAIYKDTFKMLKNAFP--------------- 510

Query: 221 EMNLNDTSSISVMWIKPLLLFVKMNXXXXXXXXXXXXXGIVRDSTGRCIMAFILHLGDGT 42
                                   N             GI+RD  G+ IMAF   LG+G+
Sbjct: 511 ------------------------NGSALTNEGKIGAGGIIRDKEGKMIMAFSTPLGEGS 546

Query: 41  SNTAEAKTFIFGI 3
           +N AE +  +FG+
Sbjct: 547 NNQAEIEAALFGL 559


>ref|XP_004239568.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 308

 Score = 92.4 bits (228), Expect = 1e-16
 Identities = 51/191 (26%), Positives = 92/191 (48%), Gaps = 2/191 (1%)
 Frame = -3

Query: 569 ETAEHLFCSGHFP*IIWDNFAGGMGTNTSNTNLRDLLNRCWNSKARNPITSYVLKILPPI 390
           ++ +H F SG F   +W+ FA   G    +++L+  + + W ++ +N     +L+  P  
Sbjct: 2   DSIDHTFNSGPFAARVWNFFAASAGLQADHSSLQARVQQWWTARPQNEGHQLLLQATPTF 61

Query: 389 ITWELWRLRCCSRYEDERPFIMRSKTLITFNICQLTKITFTKLEIPIEWDILLTLMEMNL 210
           I W LW+ RC  +Y  +   I R K  +  +  ++ KI F  ++ P  W  L+   E   
Sbjct: 62  ICWNLWKNRCACKYGAKATNISRVKYAVYKDTFKMLKIAFPHIKWPASWTALIQTSEKCK 121

Query: 209 NDTSSISVMWIKPLLLFVKMN--XXXXXXXXXXXXXGIVRDSTGRCIMAFILHLGDGTSN 36
           ++     V W +P   ++K+N               GI+RD  G+ ++AF   LG+G++N
Sbjct: 122 HEIKVCMVAWNRPPEQWIKINTDGSALTNLGQIGAGGILRDREGKMVLAFATPLGEGSNN 181

Query: 35  TAEAKTFIFGI 3
            AE    +FG+
Sbjct: 182 KAETAAALFGL 192


>ref|XP_004243166.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 316

 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 54/191 (28%), Positives = 89/191 (46%), Gaps = 2/191 (1%)
 Frame = -3

Query: 569 ETAEHLFCSGHFP*IIWDNFAGGMGTNTSNTNLRDLLNRCWNSKARNPITSYVLKILPPI 390
           ++ EH F SG F   +W  F+   G      +L+  L + W++ A N     +L+  P  
Sbjct: 10  DSIEHTFNSGQFAGRVWSFFSASAGLKEEQPSLQARLRQWWSATATNAGHQLLLQATPTF 69

Query: 389 ITWELWRLRCCSRYEDERPFIMRSKTLITFNICQLTKITFTKLEIPIEWDILLTLMEMNL 210
           + W LW+ RC  +Y  +   I R K  I  +  ++ + TF  ++ P  W  L    E   
Sbjct: 70  VCWNLWKNRCACKYGGKATNISRVKYAIYKDTFKMLQNTFPHIKWPSNWTALYQTSEKCK 129

Query: 209 NDTSSISVMWIKPLLLFVKMN--XXXXXXXXXXXXXGIVRDSTGRCIMAFILHLGDGTSN 36
           +D     V W +P   ++K+N               GI+RD+ GR ++AF   LG+G++N
Sbjct: 130 HDIKVCKVAWNRPPEEWIKINTDGSAINNPGKIGAGGILRDTEGRLVLAFATSLGEGSNN 189

Query: 35  TAEAKTFIFGI 3
            AE +   FG+
Sbjct: 190 QAEMEAAQFGL 200