BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00038739
         (1214 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004233578.1| PREDICTED: putative ribonuclease H protein A...   224   6e-56
ref|XP_004244918.1| PREDICTED: putative ribonuclease H protein A...   219   1e-54
ref|XP_004253520.1| PREDICTED: putative ribonuclease H protein A...   218   4e-54
ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258...   210   8e-52
ref|XP_004253259.1| PREDICTED: putative ribonuclease H protein A...   206   1e-50
ref|XP_004228797.1| PREDICTED: putative ribonuclease H protein A...   202   3e-49
ref|XP_004253442.1| PREDICTED: putative ribonuclease H protein A...   197   6e-48
ref|XP_006367184.1| PREDICTED: uncharacterized protein LOC102601...   196   2e-47
gb|ABI34321.1| RNase H family protein [Solanum demissum]              195   3e-47
ref|XP_004237273.1| PREDICTED: putative ribonuclease H protein A...   195   4e-47
ref|XP_004253443.1| PREDICTED: putative ribonuclease H protein A...   191   5e-46
ref|XP_004253275.1| PREDICTED: uncharacterized protein LOC101268...   190   1e-45
ref|XP_004248595.1| PREDICTED: uncharacterized protein LOC101261...   189   2e-45
ref|XP_004253405.1| PREDICTED: putative ribonuclease H protein A...   184   8e-44
ref|XP_004253338.1| PREDICTED: putative ribonuclease H protein A...   180   9e-43
ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein A...   179   2e-42
ref|XP_004243111.1| PREDICTED: putative ribonuclease H protein A...   176   2e-41
ref|XP_004243166.1| PREDICTED: putative ribonuclease H protein A...   162   2e-37
ref|XP_004233579.1| PREDICTED: uncharacterized protein LOC101260...   160   1e-36
ref|XP_004239568.1| PREDICTED: putative ribonuclease H protein A...   157   8e-36

>ref|XP_004233578.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 955

 Score =  224 bits (571), Expect = 6e-56
 Identities = 119/387 (30%), Positives = 212/387 (54%), Gaps = 2/387 (0%)
 Frame = -1

Query: 1205 NVSIGPIAIWTINSSETFSCASAFQTLRNTNLEVPT*KCIWNKGIPFKMTFITWRAIKRK 1026
            N++I   AIWT   +  F+ ASA++ +R           +W+K IPFK++F  WRA++ K
Sbjct: 564  NINIEDTAIWTPEENGKFTIASAWEVIRKKKSTDIINNSVWHKHIPFKISFFIWRALRGK 623

Query: 1025 LPMYDNIKKYARNMNPVCNYCEQAKEESVFHVFVQGDMATKIWKFFGELMGIHMQYQSIQ 846
            LP YD ++K+  N    C  C +   + + H+ + G+ A  IWK++    GI      ++
Sbjct: 624  LPTYDYLQKFGSNATD-CYCCNRKGIDDINHILITGNFANYIWKYYAPTFGITQINIDLR 682

Query: 845  AMILSWCSYHSRNSIIIVSCQSVPIFIFWKLWKAWSSVKYGHKKYSMAKICYEVSQHLRS 666
            +++L W +  S N +  +    +P FI W LWK   +VKYG+K  S+ ++ Y + + +  
Sbjct: 683  SLLLQWTNLPSSNQVYKLLISILPNFICWHLWKNMCAVKYGNKISSIQRVQYGIFKDVMQ 742

Query: 665  YMNKKGYKMDTSHNWSRICSTMKSYKAKLSSEPIIWDKLPQNVIKINTDESSTAQDNKAG 486
             +      +   H+W R+ + ++  + +L    + W K    + K+NTD S+  +  K G
Sbjct: 743  TIKIVFPNIPWQHSWYRLINLVEQCQQQLKVIMVSWRKPQFGIYKLNTDGSALPESGKIG 802

Query: 485  IGGIARNYRGDIIRAFAKPLQFCSNNGAEIKAALFGTNWIDFNDIKESILEVDSMLVVKW 306
             GGI R+Y G +  AF+ P    +NN AE++AA +G +W + +  K  +LEVDS ++ KW
Sbjct: 803  GGGILRDYTGKLHYAFSIPFGLGTNNIAEMEAARYGLDWCEQHGYKSILLEVDSEILQKW 862

Query: 305  LEGLLAVPWEFVQEVDYMKTIIERR-HIKIQHCLREAN-TTDVMAKFGSNSQYNLISNMF 132
            +   +A+PW + Q +++++ I  +  H + QH  RE N T D+++K+  + + +++ + +
Sbjct: 863  ISNTIAIPWRYQQTIEHIQDIGRKMDHFECQHVYREVNGTADLLSKW--SHKLDILQHFY 920

Query: 131  NSMQELPQETRGAMRMDKSQLANFRIR 51
             S Q+L    RG+  +DK    NFR R
Sbjct: 921  TS-QQLIGSIRGSYILDKLGTQNFRRR 946


>ref|XP_004244918.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 1010

 Score =  219 bits (559), Expect = 1e-54
 Identities = 117/387 (30%), Positives = 213/387 (55%), Gaps = 2/387 (0%)
 Frame = -1

Query: 1184 AIWTINSSETFSCASAFQTLRNTNLEVPT*KCIWNKGIPFKMTFITWRAIKRKLPMYDNI 1005
            AIWT+     F+  SA+  +R  N+  P  + IW+K IPFK++F  W+A++ KLP  D++
Sbjct: 626  AIWTLEDKGKFTIHSAWNIIRKKNISDPINQFIWHKNIPFKVSFFIWKALRNKLPTNDSL 685

Query: 1004 KKYARNMNPVCNYCEQAKEESVFHVFVQGDMATKIWKFFGELMGIHMQYQSIQAMILSWC 825
              +  +    C  C +  ++ + H+ + G+ A  IWK     +G+H  + ++++++L W 
Sbjct: 686  MNFGMDEQE-CYCCFRKGKDDILHILITGNFAKYIWKIHATRLGVHQDHANLRSLLLHWR 744

Query: 824  SYHSRNSIIIVSCQSVPIFIFWKLWKAWSSVKYGHKKYSMAKICYEVSQHLRSYMNKKGY 645
            +    N +  +  Q +P FI W LWK   +VK+G K+ S  ++ Y + +     +     
Sbjct: 745  NIPVHNQVQKLLYQILPNFICWNLWKNRCAVKHGSKQCSTQRVQYAIFKDTMQAVMVAFP 804

Query: 644  KMDTSHNWSRICSTMKSYKAKLSSEPIIWDKLPQNVIKINTDESSTAQDNKAGIGGIARN 465
             +   +N   + +  ++ + ++    ++W+K    + K+NTD S+    NK G GGI R+
Sbjct: 805  NISRQNNLDMLINLAENCQQQVKVTKVMWEKPSLGIFKLNTDGSAIHNINKIGGGGILRD 864

Query: 464  YRGDIIRAFAKPLQFCSNNGAEIKAALFGTNWIDFNDIKESILEVDSMLVVKWLEGLLAV 285
            + G +I AFA P    +NN AE+KAAL+G +W + +  K  ILEVDS L+ KW++  + +
Sbjct: 865  HNGKLIYAFAIPFGIGTNNFAEMKAALYGLSWCEQHGYKRIILEVDSELLSKWIDNSINI 924

Query: 284  PWEFVQEVDYMKTIIER-RHIKIQHCLREAN-TTDVMAKFGSNSQYNLISNMFNSMQELP 111
            PW     +  ++ I+ +  + + QH  REAN T D++AK+  + Q +++ + F + Q+L 
Sbjct: 925  PWRCQPTIYQIQDIVNKMEYFQCQHIFREANGTADLLAKW--SHQQDIVQH-FYTQQQLI 981

Query: 110  QETRGAMRMDKSQLANFRIR*IR*NKD 30
               RG   ++K  + +FR R ++  KD
Sbjct: 982  GTIRGNYLLEKMGVQSFRRRKLKRIKD 1008


>ref|XP_004253520.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 468

 Score =  218 bits (555), Expect = 4e-54
 Identities = 120/378 (31%), Positives = 193/378 (51%), Gaps = 2/378 (0%)
 Frame = -1

Query: 1184 AIWTINSSETFSCASAFQTLRNTNLEVPT*KCIWNKGIPFKMTFITWRAIKRKLPMYDNI 1005
            AIW +N    F C SA+  +RN   +      +W+K IPFK +F+ WR +K KLP  + +
Sbjct: 83   AIWKLNIHGRFDCKSAWDEIRNKKAKNFFNSALWHKFIPFKTSFLLWRTLKGKLPTNEKL 142

Query: 1004 KKYARNMNPVCNYCEQAKEESVFHVFVQGDMATKIWKFFGELMGIHMQYQSIQAMILSWC 825
              +     P     ++A  +++ H+F  G  AT +W FF    GI   + ++ A+I  W 
Sbjct: 143  SNFGIEPLPCFCCFDRAGMDTIEHIFNSGPFATIVWNFFAATAGIQADHSTLPALIKQWW 202

Query: 824  SYHSRNSIIIVSCQSVPIFIFWKLWKAWSSVKYGHKKYSMAKICYEVSQHLRSYMNKKGY 645
            +    N+   +  Q+ PIFI W LWK   + KYG K  +++++ Y + +     +     
Sbjct: 203  TTKPNNAGHKLLLQATPIFICWNLWKNRCACKYGGKGTNISRVKYAIYKDTFKMLKNSFP 262

Query: 644  KMDTSHNWSRICSTMKSYKAKLSSEPIIWDKLPQNVIKINTDESSTAQDNKAGIGGIARN 465
             ++   NW+ +  T +     +    + W K P   IKINTD S+   + K G GGI R+
Sbjct: 263  SINWPANWTTLILTSEKCVHNIKVYKVTWFKPPDQWIKINTDGSALTNEGKIGAGGIIRD 322

Query: 464  YRGDIIRAFAKPLQFCSNNGAEIKAALFGTNWIDFNDIKESILEVDSMLVVKWLEGLLAV 285
              G +I AF+ PL   SNN AEI+AALFG  W      K  +LE+DS LVV+W+   +A 
Sbjct: 323  KEGKMIMAFSTPLGEGSNNQAEIEAALFGLTWAFELGFKNILLELDSQLVVQWISNKIAP 382

Query: 284  PWEFVQEVDYM-KTIIERRHIKIQHCLREAN-TTDVMAKFGSNSQYNLISNMFNSMQELP 111
            PW    +++ + + II+ ++ +  H  REAN   D ++K   N   N   +++    +LP
Sbjct: 383  PWNLTNQLERLQQIIIQTQNFRCCHIFREANWVADALSKHSHN---NTAPHVYVHSNQLP 439

Query: 110  QETRGAMRMDKSQLANFR 57
            +E     +MD   + +FR
Sbjct: 440  KEAHAYYQMDLMDMPSFR 457


>ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258077 [Solanum
            lycopersicum]
          Length = 1454

 Score =  210 bits (535), Expect = 8e-52
 Identities = 115/380 (30%), Positives = 203/380 (53%), Gaps = 2/380 (0%)
 Frame = -1

Query: 1184 AIWTINSSETFSCASAFQTLRNTNLEVPT*KCIWNKGIPFKMTFITWRAIKRKLPMYDNI 1005
            +IWT   S  F+ +SA+ ++R    + P    IW+K IPFK++F  WRA++ KLP  +N+
Sbjct: 1070 SIWTPTESGQFTISSAWDSIRKKRNKDPINNIIWHKQIPFKVSFFIWRALRGKLPTNENL 1129

Query: 1004 KKYARNMNPVCNYCEQAKEESVFHVFVQGDMATKIWKFFGELMGIHMQYQSIQAMILSWC 825
            ++  +N++  C  C    ++ + H+ + G+ A  IWK +   +G+     +++ ++L W 
Sbjct: 1130 QRIGKNLSD-CYCCYNKGKDDINHILINGNFAKYIWKIYSSAVGVLPINTTLRDLLLQWR 1188

Query: 824  SYHSRNSIIIVSCQSVPIFIFWKLWKAWSSVKYGHKKYSMAKICYEVSQHLRSYMNKKGY 645
            +    N +  +    +P FI W LWK   +VKYG K  S+ ++ Y + +++   +     
Sbjct: 1189 NQQYTNEVHKLLIHILPNFICWNLWKNRCAVKYGLKNSSIYRVQYGIFKNIMQVITIVFP 1248

Query: 644  KMDTSHNWSRICSTMKSYKAKLSSEPIIWDKLPQNVIKINTDESSTAQDNKAGIGGIARN 465
             +    +W+ + + ++  K       + W+K      K+NTD S+     K G GGI R+
Sbjct: 1249 SIPWQTSWNNLINIVEQCKQHYKILIVKWNKPDLGKYKLNTDGSALQNSGKIGGGGILRD 1308

Query: 464  YRGDIIRAFAKPLQFCSNNGAEIKAALFGTNWIDFNDIKESILEVDSMLVVKWLEGLLAV 285
             +G II AF+ P  F +NN AEIKAAL G +W + +  K+  LEVDS L+  W+   + +
Sbjct: 1309 NQGKIIYAFSLPFGFGTNNFAEIKAALHGLDWCEQHGYKKIELEVDSKLLCNWINSNINI 1368

Query: 284  PWEFVQEVDYMKTIIERR-HIKIQHCLREAN-TTDVMAKFGSNSQYNLISNMFNSMQELP 111
            PW + + +  +  II +    +  H  REAN T D+++K+  N +   I   F + ++L 
Sbjct: 1369 PWRYEELIQQIHQIIRKMDQFQCHHIYREANCTADLLSKWSHNLE---ILQKFYTTRQLK 1425

Query: 110  QETRGAMRMDKSQLANFRIR 51
            +  RG+  ++K  + NFR R
Sbjct: 1426 EPIRGSYLLEKMGVQNFRRR 1445


>ref|XP_004253259.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 668

 Score =  206 bits (525), Expect = 1e-50
 Identities = 114/380 (30%), Positives = 200/380 (52%), Gaps = 4/380 (1%)
 Frame = -1

Query: 1184 AIWTINSSETFSCASAFQTLRNTNLEVPT*KCIWNKGIPFKMTFITWRAIKRKLPMYDNI 1005
            AIW ++S+  F+C++A++ +RN   +      +W+  IPFK +F+ WR +K KLP  + +
Sbjct: 286  AIWKLSSNGCFTCSTAWEEVRNKKAKHKFNSLLWHNFIPFKSSFLLWRVLKGKLPTNEKL 345

Query: 1004 KKYARNMNPVCNYC--EQAKEESVFHVFVQGDMATKIWKFFGELMGIHMQYQSIQAMILS 831
              +   + P   +C  ++   +S+ H F  G  AT++W+ F    G+     S+QA +  
Sbjct: 346  SNFG--IEPSSCFCCVDRTGMDSIEHTFNSGSFATRVWRAFTTTAGLQEDQSSVQARLRQ 403

Query: 830  WCSYHSRNSIIIVSCQSVPIFIFWKLWKAWSSVKYGHKKYSMAKICYEVSQHLRSYMNKK 651
            W +   RN+   +  Q++PIFI W LWK   + KYG K  +++++ Y + +     +   
Sbjct: 404  WWTARLRNASHQLLLQAMPIFIVWNLWKNRCACKYGGKSTNISRVKYAIYKDTFKMLKSA 463

Query: 650  GYKMDTSHNWSRICSTMKSYKAKLSSEPIIWDKLPQNVIKINTDESSTAQDNKAGIGGIA 471
               ++   NW+ +  T +  K ++      W++ P+  IKINTD S+       G GGI 
Sbjct: 464  FPCINWPGNWAALIQTAERCKHEIKVCMTTWNRPPEQWIKINTDGSALINTGHCGAGGII 523

Query: 470  RNYRGDIIRAFAKPLQFCSNNGAEIKAALFGTNWIDFNDIKESILEVDSMLVVKWLEGLL 291
            R+  G I+ AFA PL   +NN AE +AALFG +W      +  ++E+DS LVV+W+    
Sbjct: 524  RDKEGKIVLAFATPLGDGTNNKAEAEAALFGLSWALELGHRNILIELDSQLVVQWISKKE 583

Query: 290  AVPWEFVQEVDYMKTII-ERRHIKIQHCLREAN-TTDVMAKFGSNSQYNLISNMFNSMQE 117
               W  + +++ ++ +I + ++ K  H  REAN   D ++K   +S       ++ S  +
Sbjct: 584  PPHWNVINQIERIQQLIMQTQNFKCNHIFREANWVADALSK---HSHTIATPQVYFSNSQ 640

Query: 116  LPQETRGAMRMDKSQLANFR 57
            LP+E +   +MD   + NFR
Sbjct: 641  LPREAQAYYQMDLQNMPNFR 660


>ref|XP_004228797.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 389

 Score =  202 bits (513), Expect = 3e-49
 Identities = 114/380 (30%), Positives = 199/380 (52%), Gaps = 2/380 (0%)
 Frame = -1

Query: 1184 AIWTINSSETFSCASAFQTLRNTNLEVPT*KCIWNKGIPFKMTFITWRAIKRKLPMYDNI 1005
            A W  +    F+  SA+  +R      P   C+W+K +PFK +F  WRA++ KLP  +N+
Sbjct: 5    AYWMPDDKGQFTIFSAWDIIRKKKDPDPIHNCVWHKNVPFKTSFFIWRALRSKLPTNENL 64

Query: 1004 KKYARNMNPVCNYCEQAKEESVFHVFVQGDMATKIWKFFGELMGIHMQYQSIQAMILSWC 825
             K+ +     C  C +  ++ + H+ + G+ A  IWK   + +GI +   ++++ +LSW 
Sbjct: 65   LKFGKE-ELECYCCYRKGKDDLKHILITGNFAKYIWKIHTKRLGIAIVNTNLRSTLLSWR 123

Query: 824  SYHSRNSIIIVSCQSVPIFIFWKLWKAWSSVKYGHKKYSMAKICYEVSQHLRSYMNKKGY 645
               S N +  +    +P  I W LWK   S KYG+K  S+ ++   + + +   +     
Sbjct: 124  RLTSYNEVHKLILHILPNIICWNLWKNRCSAKYGNKPSSIYRVESGIFKDIMQIIKAVYP 183

Query: 644  KMDTSHNWSRICSTMKSYKAKLSSEPIIWDKLPQNVIKINTDESSTAQDNKAGIGGIARN 465
             +    +W R+ + ++  +  L    + W++ P+ + K+NTD S+     K G GGI R+
Sbjct: 184  NIPWQSSWERLFNLVEQCQQHLKVTMVNWERPPEGIHKLNTDGSAKHNTGKIGGGGILRD 243

Query: 464  YRGDIIRAFAKPLQFCSNNGAEIKAALFGTNWIDFNDIKESILEVDSMLVVKWLEGLLAV 285
            ++G +I AFA PL F +NN AEI+AAL G  W   +  ++ ILEVDS L+ KW+    +V
Sbjct: 244  HQGKLIYAFAIPLGFGTNNFAEIQAALHGLQWCQQHGFEKIILEVDSELLHKWIINKSSV 303

Query: 284  PWEFVQEVDYMKTIIERRHI-KIQHCLREAN-TTDVMAKFGSNSQYNLISNMFNSMQELP 111
            PW  +  +  ++ I  +  + + +H  REAN T D++AK+  +     I   F + Q+L 
Sbjct: 304  PWRCLHYIQQIQNISNKMEVFQCKHIYREANGTADLLAKWSHSMD---IIQQFYTSQQLE 360

Query: 110  QETRGAMRMDKSQLANFRIR 51
               +G+  ++K  +  FR R
Sbjct: 361  GVIKGSYILEKMGMQLFRRR 380


>ref|XP_004253442.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 775

 Score =  197 bits (502), Expect = 6e-48
 Identities = 113/379 (29%), Positives = 192/379 (50%), Gaps = 2/379 (0%)
 Frame = -1

Query: 1181 IWTINSSETFSCASAFQTLRNTNLEVPT*KCIWNKGIPFKMTFITWRAIKRKLPMYDNIK 1002
            +W ++S   FSC SA++ +RN   +      +W+  IPFK +F+ WR +K K+P  + + 
Sbjct: 391  VWKLHSQGKFSCHSAWEEIRNKKAKNRFLSFLWHNFIPFKTSFLLWRILKGKIPTNEKLT 450

Query: 1001 KYARNMNPVCNYCEQAKEESVFHVFVQGDMATKIWKFFGELMGIHMQYQSIQAMILSWCS 822
             +    +P     ++A  +S+ H+F  G+ A ++WK F    G+    Q++QA +  W +
Sbjct: 451  NFGIEPSPCYCCVDRAGMDSINHIFNTGNFAGRVWKSFAAGAGLQQDQQTLQARLKQWWT 510

Query: 821  YHSRNSIIIVSCQSVPIFIFWKLWKAWSSVKYGHKKYSMAKICYEVSQHLRSYMNKKGYK 642
              S N+   +  Q+ PIFI W LWK   + KYG K  +++++ Y V +     M      
Sbjct: 511  AKSCNAGHQLLLQATPIFICWNLWKNRCACKYGGKATNISRVKYAVYKDNFKMMKNAFPH 570

Query: 641  MDTSHNWSRICSTMKSYKAKLSSEPIIWDKLPQNVIKINTDESSTAQDNKAGIGGIARNY 462
            +    +W+ +  T +  K       ++W++ P+  IKINTD S+       G GGI RN 
Sbjct: 571  IQWPAHWTALIHTSEKCKHDTKVCQVVWNRPPEEWIKINTDGSALTNPGNIGAGGIIRNK 630

Query: 461  RGDIIRAFAKPLQFCSNNGAEIKAALFGTNWIDFNDIKESILEVDSMLVVKWLEGLLAVP 282
             G ++ AFA  L   SNN AE +AAL G         +  I+E+DS L+V+W+       
Sbjct: 631  EGKLVMAFATSLGEGSNNKAETEAALIGLVHALELGYRNIIMELDSQLIVQWISKKSVHH 690

Query: 281  WEFVQEVDYMK-TIIERRHIKIQHCLREAN-TTDVMAKFGSNSQYNLISNMFNSMQELPQ 108
            W    +++ ++  I++ ++ K QH  REAN   D ++K   +S +     ++    +LP+
Sbjct: 691  WSVSNQIERLQYLIMQTQNFKCQHIFREANWVADALSK---HSHHITSPQLYFDSNQLPK 747

Query: 107  ETRGAMRMDKSQLANFRIR 51
            E     RMD   + +FR R
Sbjct: 748  EANAYYRMDLLNMPSFRRR 766


>ref|XP_006367184.1| PREDICTED: uncharacterized protein LOC102601483 [Solanum tuberosum]
          Length = 2019

 Score =  196 bits (497), Expect = 2e-47
 Identities = 106/339 (31%), Positives = 173/339 (51%), Gaps = 2/339 (0%)
 Frame = -1

Query: 1184 AIWTINSSETFSCASAFQTLRNTNLEVPT*KCIWNKGIPFKMTFITWRAIKRKLPMYDNI 1005
            A+W +NSS  FS +SA+ ++R         K  W+  IPFK +F+ WRAI+ KLP  + +
Sbjct: 863  AVWKLNSSGLFSVSSAWNSIREKREITKINKYTWHPKIPFKCSFLLWRAIRGKLPTNEKL 922

Query: 1004 KKYARNMNPVCNYCEQAKEESVFHVFVQGDMATKIWKFFGELMGIHMQYQSIQAMILSWC 825
              +    +  C+ C     +++ H    GD A  +WK+F   +GI   +  ++ MI+ W 
Sbjct: 923  LSFGIEPSD-CHCCHSPGIDTIEHTLNSGDFAKNVWKYFAISLGIRTDFLPLRNMIMRWW 981

Query: 824  SYHSRNSIIIVSCQSVPIFIFWKLWKAWSSVKYGHKKYSMAKICYEVSQHLRSYMNKKGY 645
            S    N    +   S PIFI W LWK   +VKYG K+ ++A++ + V       ++    
Sbjct: 982  SAPHNNEAHKLILHSTPIFICWNLWKNRCAVKYGGKQSNIARVKHLVILDNFKLLHTVFP 1041

Query: 644  KMDTSHNWSRICSTMKSYKAKLSSEPIIWDKLPQNVIKINTDESSTAQDNKAGIGGIARN 465
             +     W++ C+ +++         + W K P   +K+NTD S+ +     G G + RN
Sbjct: 1042 YISWPLRWNKFCNVIENCSQDTKVTAVQWTKPPYRWVKLNTDGSALSNPGSIGAGDVIRN 1101

Query: 464  YRGDIIRAFAKPLQFCSNNGAEIKAALFGTNWIDFNDIKESILEVDSMLVVKWLEGLLAV 285
            + G+II A++ PL   +NN AE++AA+FG  W       + ILEVDS L+V W +    +
Sbjct: 1102 HLGEIILAYSTPLGTGTNNQAEVEAAIFGIAWCIHMKYNQVILEVDSQLLVDWFKNNKLI 1161

Query: 284  PWEFVQEVDYMKTI-IERRHIKIQHCLREAN-TTDVMAK 174
            PW    ++  +  +  +  H K  H  REAN   DV++K
Sbjct: 1162 PWNISSQMQQLHQLATQLDHFKCIHTFREANFVADVLSK 1200



 Score =  123 bits (308), Expect = 2e-25
 Identities = 65/235 (27%), Positives = 111/235 (47%)
 Frame = -1

Query: 1184 AIWTINSSETFSCASAFQTLRNTNLEVPT*KCIWNKGIPFKMTFITWRAIKRKLPMYDNI 1005
            AIW +NS   F+ +SA+  +R    +      IW+K IPFK +F+ WR ++ KLP  + +
Sbjct: 566  AIWKLNSDGNFTYSSAWNAIREKRTKTIFNTFIWHKSIPFKTSFLLWRTLRGKLPTNEKL 625

Query: 1004 KKYARNMNPVCNYCEQAKEESVFHVFVQGDMATKIWKFFGELMGIHMQYQSIQAMILSWC 825
              +          C ++  +++ H F +G  AT +WK F    GI   + S+  +I+ W 
Sbjct: 626  ISFGNEPANCFCCCNRSGLDTIEHTFNKGQFATYLWKSFAAAAGIITYHNSLPQLIMQWW 685

Query: 824  SYHSRNSIIIVSCQSVPIFIFWKLWKAWSSVKYGHKKYSMAKICYEVSQHLRSYMNKKGY 645
            S    N+   +  Q+ PIFI W LWK   + KYG K+ +++++ Y + +     M     
Sbjct: 686  STKHNNAAYRLILQATPIFICWNLWKNRCASKYGGKQSNISRVKYAIYKDNYKLMTTTFP 745

Query: 644  KMDTSHNWSRICSTMKSYKAKLSSEPIIWDKLPQNVIKINTDESSTAQDNKAGIG 480
            ++    NW  +    +          + W K  +  +KINTD S+     + G G
Sbjct: 746  QIKWPSNWMELLQLGERCTHDTKVTMVKWIKPKKQWVKINTDGSALCNPGRIGAG 800


>gb|ABI34321.1| RNase H family protein [Solanum demissum]
          Length = 945

 Score =  195 bits (496), Expect = 3e-47
 Identities = 118/384 (30%), Positives = 201/384 (52%), Gaps = 6/384 (1%)
 Frame = -1

Query: 1184 AIWTINSSETFSCASAFQTLRNTNLEVPT*KCIWNKGIPFKMTFITWRAIKRKLPMYDNI 1005
            AIW  + +  F+  SA+    NT  +      IW+   PFKM+F+TWR ++ KLP YD +
Sbjct: 538  AIWIPSENGHFTTKSAYVDCSNTREKNDMRNKIWHGKFPFKMSFLTWRLVQNKLPFYDTV 597

Query: 1004 KKYARNMNPVCNYCEQAKEESVFHVFVQGDMATKIWKFFGELMGIHMQYQSIQAMILSWC 825
             K+  N++  C  C+  K E++ HVF+  D+A+ +WK FG  +GI  +  S   ++ +W 
Sbjct: 598  GKFVDNIDSNCVCCKNMKTETINHVFLNSDVASYLWKKFGGTLGIDTRASSTINLLKTWW 657

Query: 824  SYHSRNSIIIVSCQSVPIFIFWKLWKAWSSVKYGHKKYSMAKICYEVSQHLRSYMNKKGY 645
            +  + NSI  V   ++PI IFW++WK   + KYG +K    K+ Y   ++   +  K   
Sbjct: 658  NVQTHNSIHNVIIHTLPILIFWEIWKRRCACKYGDQK----KMWYRTMENHVWWNLKMSL 713

Query: 644  KM-----DTSHNWSRICSTMKSYKAKLSSEPIIWDKLPQNVIKINTDESSTAQDNKAGIG 480
            +M     +  ++W  + + ++S +     + + W+    N +KINTD S ++    AG+G
Sbjct: 714  RMTFPSFEIGNSWRDLLNKVESLRPYPKWKIVHWNTPNINCVKINTDGSFSS--GNAGLG 771

Query: 479  GIARNYRGDIIRAFAKPLQFCSNNGAEIKAALFGTNWIDFNDIKESILEVDSMLVVKWLE 300
             I R++   +I AF+ P    SNN AE  AA FG  W          LE+DS LVV  + 
Sbjct: 772  WIVRDHTRRMIMAFSIPSSCSSNNLAEALAARFGILWCLQQGFHNCYLELDSKLVVDMVR 831

Query: 299  GLLAVPWEFVQEVDYMKTIIERRHIKIQHCLREAN-TTDVMAKFGSNSQYNLISNMFNSM 123
               A   +    V+ +  ++ + + ++ HC REAN   D +AK    S     ++M++  
Sbjct: 832  NGQATNLKIKGVVEDIIQVVAKMNCEVNHCYREANQVADALAKHAVISNE---AHMYHDW 888

Query: 122  QELPQETRGAMRMDKSQLANFRIR 51
            +++P+   G+ ++DK Q+ + RIR
Sbjct: 889  RDIPKLAVGSYQLDKMQMPSIRIR 912


>ref|XP_004237273.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 601

 Score =  195 bits (495), Expect = 4e-47
 Identities = 109/383 (28%), Positives = 200/383 (52%), Gaps = 2/383 (0%)
 Frame = -1

Query: 1184 AIWTINSSETFSCASAFQTLRNTNLEVPT*KCIWNKGIPFKMTFITWRAIKRKLPMYDNI 1005
            AIW  + +  F+ +SA++ +R      P    IW+K IPFK++F  W A+  KLP  + +
Sbjct: 217  AIWIPDETVKFTISSAWKVIRKKRSHDPINNIIWHKHIPFKISFFIWGALTGKLPTNEIL 276

Query: 1004 KKYARNMNPVCNYCEQAKEESVFHVFVQGDMATKIWKFFGELMGIHMQYQSIQAMILSWC 825
            ++  R++   C  C    ++ + H+ + G+ A  IWK     +G      ++++ +L W 
Sbjct: 277  QRLGRDIVD-CYCCYSKVKDDINHILLTGNFANYIWKKHASTVGALHVNTNMRSQLLYWR 335

Query: 824  SYHSRNSIIIVSCQSVPIFIFWKLWKAWSSVKYGHKKYSMAKICYEVSQHLRSYMNKKGY 645
            S  + N +  +   ++P  I W LW+   +VKYG K+ S+ ++ Y + +     +  +  
Sbjct: 336  SLQTNNEVHKLLIHTLPNIICWNLWENRCAVKYGGKQSSIYRVQYGIFKDTMQIIKLEYS 395

Query: 644  KMDTSHNWSRICSTMKSYKAKLSSEPIIWDKLPQNVIKINTDESSTAQDNKAGIGGIARN 465
             +   ++W  + + +   + +     + W K      K+NTD S   ++     GGI R+
Sbjct: 396  NIPWQYSWGHLINFIDQCQQQYKIFMVRWIKPTIGRYKLNTDGSCLQENGNIEGGGILRD 455

Query: 464  YRGDIIRAFAKPLQFCSNNGAEIKAALFGTNWIDFNDIKESILEVDSMLVVKWLEGLLAV 285
            ++G II AFA P  F +NN A++KAAL+G  W + +  K+ +LE+DS L+ KW+   + +
Sbjct: 456  HQGSIIFAFASPFAFGTNNIAKLKAALYGLEWCEQHGYKDIVLEIDSELLSKWISNTIQI 515

Query: 284  PWEFVQEVDYMKTIIER-RHIKIQHCLREANTT-DVMAKFGSNSQYNLISNMFNSMQELP 111
            PW   Q V ++  I ++  H + QH  RE N+T D++AK+  N +   I   F + ++  
Sbjct: 516  PWRCQQYVQHIHEITKKLHHFQCQHIYREENSTADLLAKWSHNIE---IPQDFYTTRQFK 572

Query: 110  QETRGAMRMDKSQLANFRIR*IR 42
               RG+  ++K  + NFR R ++
Sbjct: 573  GTIRGSYILEKMGIQNFRRRKVK 595


>ref|XP_004253443.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 775

 Score =  191 bits (485), Expect = 5e-46
 Identities = 109/379 (28%), Positives = 192/379 (50%), Gaps = 2/379 (0%)
 Frame = -1

Query: 1181 IWTINSSETFSCASAFQTLRNTNLEVPT*KCIWNKGIPFKMTFITWRAIKRKLPMYDNIK 1002
            +W ++S   FSC SA++ +RN   +      +W+  IPFK +F+ WR +K K+P  + + 
Sbjct: 391  VWKLHSQGKFSCHSAWEEIRNKKAKNRFLSFLWHNFIPFKTSFLLWRILKGKIPTNEKLT 450

Query: 1001 KYARNMNPVCNYCEQAKEESVFHVFVQGDMATKIWKFFGELMGIHMQYQSIQAMILSWCS 822
             +    +P     ++A  +S+ H+F  G+ A ++WK F    G+    Q++QA +  W +
Sbjct: 451  NFGIEPSPCYCCVDRAGMDSINHIFNTGNFAGRVWKSFAAGAGLQEDQQTLQARLKQWWT 510

Query: 821  YHSRNSIIIVSCQSVPIFIFWKLWKAWSSVKYGHKKYSMAKICYEVSQHLRSYMNKKGYK 642
              S N+   +  Q+ PIFI W LWK   + KYG K  +++++ Y V +     M      
Sbjct: 511  AKSCNAGHQLLLQATPIFICWNLWKNRCACKYGGKATNISRVKYVVYKDNFKMMKNAFPH 570

Query: 641  MDTSHNWSRICSTMKSYKAKLSSEPIIWDKLPQNVIKINTDESSTAQDNKAGIGGIARNY 462
            +    +W+ +  T +  K       ++W++ P+  IKINTD S+     K G GGI RN 
Sbjct: 571  IQWPAHWTALIHTSEKCKHDTKVCQVVWNRPPEEWIKINTDGSALTNPGKIGAGGIIRNK 630

Query: 461  RGDIIRAFAKPLQFCSNNGAEIKAALFGTNWIDFNDIKESILEVDSMLVVKWLEGLLAVP 282
             G ++ AFA  L   + N A+ +AAL G         +  I+E+DS L+V+W+       
Sbjct: 631  EGKLVMAFATSLGEGTKNKAKTEAALIGLVHALELGYRNIIMELDSQLIVQWISKKSVHH 690

Query: 281  WEFVQEVDYMK-TIIERRHIKIQHCLREAN-TTDVMAKFGSNSQYNLISNMFNSMQELPQ 108
            W    +++ ++  I++ ++ K QH  +EAN   D ++K   ++ +     ++    +LP+
Sbjct: 691  WSVSNQIERLQYLIMQTQNFKCQHIFKEANWVADALSK---HNHHITSPQLYFDSNQLPK 747

Query: 107  ETRGAMRMDKSQLANFRIR 51
            E     RMD   + +FR R
Sbjct: 748  EANAYYRMDLLNMPSFRRR 766


>ref|XP_004253275.1| PREDICTED: uncharacterized protein LOC101268853 [Solanum
            lycopersicum]
          Length = 1333

 Score =  190 bits (482), Expect = 1e-45
 Identities = 109/382 (28%), Positives = 197/382 (51%), Gaps = 4/382 (1%)
 Frame = -1

Query: 1184 AIWTINSSETFSCASAFQTLRNTNLEVPT*KCIWNKGIPFKMTFITWRAIKRKLPMYDNI 1005
            A W    +  FS ASA++ +R   +       IW+K +PFK+ F  WRA+K KLP  + +
Sbjct: 949  ATWMPTETGIFSIASAWECIRKKRIIDNISTIIWHKHLPFKIAFFIWRALKGKLPTNEFL 1008

Query: 1004 KKYARNMNPVCNYCEQAKEESVFHVFVQGDMATKIWKFFGELMGIHMQYQSIQAMILSWC 825
            ++   +++   + C +  ++ + H+ + G+ A  IWK     +GI     +++A +L W 
Sbjct: 1009 QRIGSDISDY-SCCYRKGKDDINHILINGNFAKYIWKIHAATLGIIPVNTTLRAQLLHWR 1067

Query: 824  SYHSRNSIIIVSCQSVPIFIFWKLWKAWSSVKYGHKKYSMAKICYEVSQHLRSYMNKKGY 645
            +    N +  +    +P  I W LWK   +VKYG K+ S+ ++ Y + + +   +     
Sbjct: 1068 NQQVNNEVHKLLIHILPNIICWNLWKNRCAVKYGKKRSSIHRVKYGIFKEVMQVIKLVFP 1127

Query: 644  KMDTSHNWSRICSTMKSYKAKLSSEPIIWDKLPQNVIKINTDESSTAQDNKAGIGGIARN 465
             +    NW+ + + ++    +     + W+K      K+NTD S+     K G GG  R+
Sbjct: 1128 SIPWQSNWNNLVNIIEHCSQQYKIVLVSWNKPALGTYKLNTDGSAIQNSGKIGGGGNLRD 1187

Query: 464  YRGDIIRAFAKPLQFCSNNGAEIKAALFGTNWIDFNDIKESILEVDSMLVVKWLEGLLAV 285
            ++G I+ AF+ P    +NN AEIKAAL+G  W + +  K+  LEV+S L+  W++    +
Sbjct: 1188 FQGKIVYAFSIPFGVGTNNFAEIKAALYGMEWCEQHGYKKVELEVNSELLYNWIKNTTKI 1247

Query: 284  PWEF---VQEVDYMKTIIERRHIKIQHCLREA-NTTDVMAKFGSNSQYNLISNMFNSMQE 117
            PW +   VQ++  +   +E+ H    H  REA NT D+++K+ +N +   I   F + ++
Sbjct: 1248 PWRYEDLVQQIQQISMKMEQFH--CHHIYREANNTADLLSKWSNNCE---IVQHFYTTRQ 1302

Query: 116  LPQETRGAMRMDKSQLANFRIR 51
            L    +G+  ++K  + NFR R
Sbjct: 1303 LEGAIKGSYILEKMGVQNFRRR 1324


>ref|XP_004248595.1| PREDICTED: uncharacterized protein LOC101261371 [Solanum
            lycopersicum]
          Length = 1246

 Score =  189 bits (481), Expect = 2e-45
 Identities = 103/357 (28%), Positives = 184/357 (51%), Gaps = 2/357 (0%)
 Frame = -1

Query: 1184 AIWTINSSETFSCASAFQTLRNTNLEVPT*KCIWNKGIPFKMTFITWRAIKRKLPMYDNI 1005
            AIW    +  F+ ASA++ +RN          IW+K +PFK+ F  WRA+K KLP  + +
Sbjct: 877  AIWIPTETGNFTIASAWECIRNKRPIDTINTIIWHKHLPFKIAFFIWRALKGKLPTNELL 936

Query: 1004 KKYARNMNPVCNYCEQAKEESVFHVFVQGDMATKIWKFFGELMGIHMQYQSIQAMILSWC 825
            +++   ++  C  C    ++ + H+ + G+ A  IWK    ++G+     +++  +L W 
Sbjct: 937  QRFGSAISK-CYCCYSKGKDDINHILINGNFAKHIWKIHAAILGVVPANTTLRDQLLHWR 995

Query: 824  SYHSRNSIIIVSCQSVPIFIFWKLWKAWSSVKYGHKKYSMAKICYEVSQHLRSYMNKKGY 645
            +    N +  +    +P  I W LWK   +VKYG+K  S+ ++ Y + + +   +     
Sbjct: 996  NQQVNNEVHKLLIHILPNVICWNLWKNRCAVKYGNKSSSIHRVQYGIFKDVMQVIKIVFP 1055

Query: 644  KMDTSHNWSRICSTMKSYKAKLSSEPIIWDKLPQNVIKINTDESSTAQDNKAGIGGIARN 465
             +    +W+++ + ++  K +     + W+K      K+NTD S+     K G GGI R+
Sbjct: 1056 SIPWQSSWNKLINIVEHCKQQYKIVLVSWNKPGLGTYKLNTDGSALQNSGKIGGGGILRD 1115

Query: 464  YRGDIIRAFAKPLQFCSNNGAEIKAALFGTNWIDFNDIKESILEVDSMLVVKWLEGLLAV 285
            ++G I+ AF+ P  F +NN AEIKAAL+G  W D +  K   LEVDS L+  W++    +
Sbjct: 1116 HQGKIVYAFSLPFGFGTNNIAEIKAALYGLEWCDQHGYKRVELEVDSQLLCNWIKNKTNI 1175

Query: 284  PWEFVQEVDYMKTIIER-RHIKIQHCLREAN-TTDVMAKFGSNSQYNLISNMFNSMQ 120
            PW +   +  +K I  +    +  H  REAN T D+++K+  + +  L+ + +   Q
Sbjct: 1176 PWIYEDLIQQIKQITRKIEQFQCHHIYREANITADLLSKWSHSLE--LVQHFYTKRQ 1230


>ref|XP_004253405.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 375

 Score =  184 bits (466), Expect = 8e-44
 Identities = 111/379 (29%), Positives = 190/379 (50%), Gaps = 3/379 (0%)
 Frame = -1

Query: 1184 AIWTINSSETFSCASAFQTLRNTNLEVPT*KCIWNKGIPFKMTFITWRAIKRKLPMYDNI 1005
            AIW ++S+  F+C++A++ +RN   +      +W+  IPFK +F+ WR +K KLP  + +
Sbjct: 15   AIWKLSSNGCFTCSTAWEEVRNKKAKHKFNSLLWHNFIPFKSSFLLWRVLKGKLPTNEKL 74

Query: 1004 KKYARNMNPVCNYC--EQAKEESVFHVFVQGDMATKIWKFFGELMGIHMQYQSIQAMILS 831
              ++  + P   +C  ++ + +S+ H F  G  ATK+W+ F    G+     S+QA +  
Sbjct: 75   SNFS--IEPSSCFCCVDRTRMDSIEHTFNSGSFATKVWRAFTTTAGLQEDQSSVQARLRQ 132

Query: 830  WCSYHSRNSIIIVSCQSVPIFIFWKLWKAWSSVKYGHKKYSMAKICYEVSQHLRSYMNKK 651
            W +   RN+   +  Q++PIFI W LWK   + KYG K  +++++ Y V +     +   
Sbjct: 133  WWTARPRNASHQLLLQAMPIFIVWNLWKNRCACKYGGKSTNISRVKYAVYKDTFKMLKIA 192

Query: 650  GYKMDTSHNWSRICSTMKSYKAKLSSEPIIWDKLPQNVIKINTDESSTAQDNKAGIGGIA 471
              +++   NW+ +  T +  K ++      W++ P+  IKINTD S+       G GGI 
Sbjct: 193  FPRVNWPGNWAALIQTAERCKHEIKVCMTTWNRPPEQWIKINTDGSALINTGHCGAGGII 252

Query: 470  RNYRGDIIRAFAKPLQFCSNNGAEIKAALFGTNWIDFNDIKESILEVDSMLVVKWLEGLL 291
            R+  G ++ AFA PL   +NN AE +AALFG +W      +  ++E+DS LVV W     
Sbjct: 253  RDKEGKMVLAFATPLGDGTNNKAEAEAALFGLSWALELGHRNILIELDSQLVVHW----- 307

Query: 290  AVPWEFVQEVDYMKTIIERRHIKIQHCLREAN-TTDVMAKFGSNSQYNLISNMFNSMQEL 114
                            I ++   I     EAN   D ++K   +S       ++ +  +L
Sbjct: 308  ----------------ISKKEPPIG---MEANWVADALSK---HSHTIATPQVYFNNSQL 345

Query: 113  PQETRGAMRMDKSQLANFR 57
            P+E +   +MD   + NFR
Sbjct: 346  PREAQAYYQMDLQNMPNFR 364


>ref|XP_004253338.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 655

 Score =  180 bits (457), Expect = 9e-43
 Identities = 93/314 (29%), Positives = 164/314 (52%)
 Frame = -1

Query: 1184 AIWTINSSETFSCASAFQTLRNTNLEVPT*KCIWNKGIPFKMTFITWRAIKRKLPMYDNI 1005
            AIW    +  FS +SA++ +R   +       IWNK +PFK+ F  WRA+K KLP  + +
Sbjct: 331  AIWMPTETGIFSISSAWECIRKKRIIDNISTIIWNKHLPFKIAFFIWRALKGKLPTNEFL 390

Query: 1004 KKYARNMNPVCNYCEQAKEESVFHVFVQGDMATKIWKFFGELMGIHMQYQSIQAMILSWC 825
            ++   N++  C+ C +  ++ + H+ + G+ A  IWK     +GI     +++A +L W 
Sbjct: 391  QRIGSNISD-CSCCYRKGKDDINHILINGNFAKYIWKIHAATLGIIPVNTNLRAQLLHWR 449

Query: 824  SYHSRNSIIIVSCQSVPIFIFWKLWKAWSSVKYGHKKYSMAKICYEVSQHLRSYMNKKGY 645
            +    N +  +    +P  I W LWK   +VKYG K+ ++ ++ Y + + +   +     
Sbjct: 450  NQKVNNEVHKLLIHILPNLICWNLWKNRCAVKYGKKRSNVHRVKYGIFKEVMQIIKLVFP 509

Query: 644  KMDTSHNWSRICSTMKSYKAKLSSEPIIWDKLPQNVIKINTDESSTAQDNKAGIGGIARN 465
             +    NW+ + + +++   +     + W+K      K+NTD S+     K G GGI R+
Sbjct: 510  SIPWQANWNNLVNIIENCSQQYKIVLVSWNKPAFGTYKLNTDGSAIQNSGKTGGGGILRD 569

Query: 464  YRGDIIRAFAKPLQFCSNNGAEIKAALFGTNWIDFNDIKESILEVDSMLVVKWLEGLLAV 285
            ++G I+ AF+ P    +NN AEIKAAL+G  W + +  K+  LEVDS L+  W++    +
Sbjct: 570  FQGKIVYAFSIPFGVGTNNFAEIKAALYGMQWCEQHGYKKVELEVDSELLFNWIKNTTKI 629

Query: 284  PWEFVQEVDYMKTI 243
            PW +   V  ++ I
Sbjct: 630  PWRYEDLVQQIQQI 643


>ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            tuberosum]
          Length = 885

 Score =  179 bits (454), Expect = 2e-42
 Identities = 106/378 (28%), Positives = 187/378 (49%), Gaps = 2/378 (0%)
 Frame = -1

Query: 1178 WTINSSETFSCASAFQTLRNTNLEVPT*KCIWNKGIPFKMTFITWRAIKRKLPMYDNIKK 999
            W  N+   F+  SA+Q  RN        + IWNK +PFK+ F  WR  KR++   DN+KK
Sbjct: 495  WMANAQGIFTVKSAWQITRNKQEVRRDCEVIWNKELPFKINFFMWRVWKRRIATDDNLKK 554

Query: 998  YARNMNPVCNYCEQAKEESVFHVFVQGDMATKIWKFFGELMGIHMQYQSIQAMILSWCSY 819
               N+   C  C++ KEE++ H+F    +  K+W++F    GI++    +Q +I+SW  +
Sbjct: 555  MRINIVSRCWCCDRKKEETMTHLFPTAPITYKLWRYFAHFAGINIDGMHLQQLIISWWKH 614

Query: 818  HSRNSIIIVSCQSVPIFIFWKLWKAWSSVKYGHKKYSMAKICYEVSQHLRSYMNKK-GYK 642
             +   +  +  +++P  I W LWK  +++K+     S  ++   V + +R  +  +  + 
Sbjct: 615  EATPKLQGI-YKAIPAIIMWTLWKRRNALKH-DSSISWERMVEMVIEVVRKMVKSQFPWI 672

Query: 641  MDTSHNWSRICSTMKSYKAKLSSEPIIWDKLPQNVIKINTDESSTAQDNKAGIGGIARNY 462
             +    W  I   +  YK K+    + W     + +K NTD +       +  G   R+ 
Sbjct: 673  KNMRWTWQAIIQRLNQYKRKIHVLRVTWKPPDDHYVKSNTDGACRGNPGLSSFGFCIRDD 732

Query: 461  RGDIIRAFAKPLQFCSNNGAEIKAALFGTNWIDFNDIKESILEVDSMLVVKWLEGLLAVP 282
            +GD+I A AK +   +N  AE  A L          +++ I+E DS+ + K ++    VP
Sbjct: 733  KGDLIYAKAKGIGIATNMEAETVAILTALRECSNRKMQKVIIETDSLSLKKIIQQTWRVP 792

Query: 281  WEFVQEVDYMKTIIERRHIKIQHCLREANT-TDVMAKFGSNSQYNLISNMFNSMQELPQE 105
            W+  ++V+ ++ I+E+   KI H  RE N+  D +A     SQ     + ++  QELP +
Sbjct: 793  WKIAEKVEEIREIMEKIKAKITHIFREGNSLADSLANIAIESQ---AEHQYSCFQELPLK 849

Query: 104  TRGAMRMDKSQLANFRIR 51
             R  + +DK+Q+   RIR
Sbjct: 850  ERRILNIDKAQIPTLRIR 867


>ref|XP_004243111.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 927

 Score =  176 bits (446), Expect = 2e-41
 Identities = 107/380 (28%), Positives = 187/380 (49%), Gaps = 2/380 (0%)
 Frame = -1

Query: 1184 AIWTINSSETFSCASAFQTLRNTNLEVPT*KCIWNKGIPFKMTFITWRAIKRKLPMYDNI 1005
            AIW    S  FS +SA++ +R  + + P  K +WNK IPFK++F  WRA++ K+P  +++
Sbjct: 580  AIWIPVVSGNFSISSAWEIIRKKHNKDPINKIVWNKQIPFKVSFFIWRALRGKIPTNESL 639

Query: 1004 KKYARNMNPVCNYCEQAKEESVFHVFVQGDMATKIWKFFGELMGIHMQYQSIQAMILSWC 825
             K+ R     C  C +  ++ + H+ V G+ A  IWK+    +G+     ++++ ++   
Sbjct: 640  LKFGRE-GVDCYCCYKKWKDEISHILVTGNFAKHIWKYHASSVGVIQANTTLRSQLIQ-- 696

Query: 824  SYHSRNSIIIVSCQSVPIFIFWKLWKAWSSVKYGHKKYSMAKICYEVSQHLRSYMNKKGY 645
                                         +VKYG K+ S+ K+ Y +S+     +     
Sbjct: 697  ----------------------------CAVKYGGKQSSIQKVKYGISKETMQVIKLTFP 728

Query: 644  KMDTSHNWSRICSTMKSYKAKLSSEPIIWDKLPQNVIKINTDESSTAQDNKAGIGGIARN 465
             +    NW  + + ++  K       + W K  Q+V K+NT+ S+ A+  K G GG+ R+
Sbjct: 729  NIPWQSNWESLINIVEQCKQLYKVNMVRWIKPKQHVYKLNTNGSALAESGKIGGGGVLRH 788

Query: 464  YRGDIIRAFAKPLQFCSNNGAEIKAALFGTNWIDFNDIKESILEVDSMLVVKWLEGLLAV 285
            ++G +I AF+ PL   + N AE+KAA FG +W + +  K   LEVDS ++ +W+   +  
Sbjct: 789  HQGKLICAFSVPLGVGTYNFAELKAATFGIDWCEQHGYKSIELEVDSEIICQWINNTIKP 848

Query: 284  PWEFVQEV-DYMKTIIERRHIKIQHCLREA-NTTDVMAKFGSNSQYNLISNMFNSMQELP 111
            PW     V   ++T  + ++   +H  REA NT D++AK+        I   F + Q+L 
Sbjct: 849  PWRCQHNVQQLLQTTSKFQYFHCKHIYREANNTADLLAKWSHTMD---IPQHFYTPQQLK 905

Query: 110  QETRGAMRMDKSQLANFRIR 51
               R +  ++K  + NFR R
Sbjct: 906  GTIRESYMLEKMDIHNFRRR 925


>ref|XP_004243166.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 316

 Score =  162 bits (411), Expect = 2e-37
 Identities = 93/304 (30%), Positives = 157/304 (51%), Gaps = 2/304 (0%)
 Frame = -1

Query: 962 EQAKEESVFHVFVQGDMATKIWKFFGELMGIHMQYQSIQAMILSWCSYHSRNSIIIVSCQ 783
           ++A  +S+ H F  G  A ++W FF    G+  +  S+QA +  W S  + N+   +  Q
Sbjct: 5   KRAGLDSIEHTFNSGQFAGRVWSFFSASAGLKEEQPSLQARLRQWWSATATNAGHQLLLQ 64

Query: 782 SVPIFIFWKLWKAWSSVKYGHKKYSMAKICYEVSQHLRSYMNKKGYKMDTSHNWSRICST 603
           + P F+ W LWK   + KYG K  +++++ Y + +     +      +    NW+ +  T
Sbjct: 65  ATPTFVCWNLWKNRCACKYGGKATNISRVKYAIYKDTFKMLQNTFPHIKWPSNWTALYQT 124

Query: 602 MKSYKAKLSSEPIIWDKLPQNVIKINTDESSTAQDNKAGIGGIARNYRGDIIRAFAKPLQ 423
            +  K  +    + W++ P+  IKINTD S+     K G GGI R+  G ++ AFA  L 
Sbjct: 125 SEKCKHDIKVCKVAWNRPPEEWIKINTDGSAINNPGKIGAGGILRDTEGRLVLAFATSLG 184

Query: 422 FCSNNGAEIKAALFGTNWIDFNDIKESILEVDSMLVVKWLEGLLAVPWEFVQEVDYMKTI 243
             SNN AE++AA FG +W    D +  ILEVDS +VV+W+       W    +++ ++ +
Sbjct: 185 EGSNNQAEMEAAQFGLSWAIDLDYRNIILEVDSQIVVQWITKKTTHHWSVSNQLEKIQQL 244

Query: 242 IERRH-IKIQHCLREAN-TTDVMAKFGSNSQYNLISNMFNSMQELPQETRGAMRMDKSQL 69
           I+R H  K +H  REAN T D ++K   +S       ++ +  ++P+E +   RMD   +
Sbjct: 245 IQRAHKFKCEHIFREANWTADSLSK---HSHGTTGPQLYFNNNQMPKEAQAYYRMDLMNM 301

Query: 68  ANFR 57
            +FR
Sbjct: 302 PSFR 305


>ref|XP_004233579.1| PREDICTED: uncharacterized protein LOC101260201 [Solanum
            lycopersicum]
          Length = 1531

 Score =  160 bits (405), Expect = 1e-36
 Identities = 84/274 (30%), Positives = 140/274 (51%)
 Frame = -1

Query: 1145 ASAFQTLRNTNLEVPT*KCIWNKGIPFKMTFITWRAIKRKLPMYDNIKKYARNMNPVCNY 966
            ASA++ +R      P    IW+  IPFK+ F  WRA++ KLP  + + ++       C  
Sbjct: 1259 ASAWEVIRKKKSVNPINNIIWHNQIPFKVAFFIWRALRGKLPTNEGVHRFGIAAED-CYC 1317

Query: 965  CEQAKEESVFHVFVQGDMATKIWKFFGELMGIHMQYQSIQAMILSWCSYHSRNSIIIVSC 786
            C Q  ++ + H+ +  + A  IWK+   ++G+   Y +I++ ++ W + H+ N +  +  
Sbjct: 1318 CYQQGKDDINHILLTRNFANYIWKYHAAILGVTQLYTNIRSQLMHWRNQHTINEVHKLIM 1377

Query: 785  QSVPIFIFWKLWKAWSSVKYGHKKYSMAKICYEVSQHLRSYMNKKGYKMDTSHNWSRICS 606
            Q +P +I W LWK    VKYGHK  S+ ++ Y + + +   +      +    +   +  
Sbjct: 1378 QILPNYICWNLWKNRCGVKYGHKTSSIKRVQYGIFKDIMQVIRLVYPIIPWQSSLYHLIK 1437

Query: 605  TMKSYKAKLSSEPIIWDKLPQNVIKINTDESSTAQDNKAGIGGIARNYRGDIIRAFAKPL 426
            T +    +     + W K  + + K+NTD S+     K G GGI R++ G II AF+ PL
Sbjct: 1438 TAEHCHQQYKIIMVSWQKPKEGIYKLNTDGSAIQDTGKIGGGGILRDHTGKIIYAFSVPL 1497

Query: 425  QFCSNNGAEIKAALFGTNWIDFNDIKESILEVDS 324
             F +NN AE+KAA +G  W   +  K   LEVDS
Sbjct: 1498 DFGTNNMAELKAAAYGLEWCQQHGYKRIALEVDS 1531


>ref|XP_004239568.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 308

 Score =  157 bits (397), Expect = 8e-36
 Identities = 89/299 (29%), Positives = 153/299 (51%), Gaps = 2/299 (0%)
 Frame = -1

Query: 947 ESVFHVFVQGDMATKIWKFFGELMGIHMQYQSIQAMILSWCSYHSRNSIIIVSCQSVPIF 768
           +S+ H F  G  A ++W FF    G+   + S+QA +  W +   +N    +  Q+ P F
Sbjct: 2   DSIDHTFNSGPFAARVWNFFAASAGLQADHSSLQARVQQWWTARPQNEGHQLLLQATPTF 61

Query: 767 IFWKLWKAWSSVKYGHKKYSMAKICYEVSQHLRSYMNKKGYKMDTSHNWSRICSTMKSYK 588
           I W LWK   + KYG K  +++++ Y V +     +      +    +W+ +  T +  K
Sbjct: 62  ICWNLWKNRCACKYGAKATNISRVKYAVYKDTFKMLKIAFPHIKWPASWTALIQTSEKCK 121

Query: 587 AKLSSEPIIWDKLPQNVIKINTDESSTAQDNKAGIGGIARNYRGDIIRAFAKPLQFCSNN 408
            ++    + W++ P+  IKINTD S+     + G GGI R+  G ++ AFA PL   SNN
Sbjct: 122 HEIKVCMVAWNRPPEQWIKINTDGSALTNLGQIGAGGILRDREGKMVLAFATPLGEGSNN 181

Query: 407 GAEIKAALFGTNWIDFNDIKESILEVDSMLVVKWLEGLLAVPWEFVQEVDYMK-TIIERR 231
            AE  AALFG +W      +  ++E+DS LVV+W+    A  W   ++++ ++  I++ +
Sbjct: 182 KAETAAALFGLSWALELGYRNILIELDSQLVVQWISKKTAPHWSVTKQIERIQHLIMQTQ 241

Query: 230 HIKIQHCLREAN-TTDVMAKFGSNSQYNLISNMFNSMQELPQETRGAMRMDKSQLANFR 57
           + K  H  REAN   D ++K   N+       ++ S  +LP+E +   +MD   + +FR
Sbjct: 242 NFKCTHIFREANWVADSLSKHSHNT---TAPQVYFSSTQLPKEAQAYYQMDLLNMPSFR 297