BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00038732
         (606 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004245846.1| PREDICTED: poly(U)-specific endoribonuclease...    66   5e-21
ref|XP_006358620.1| PREDICTED: poly(U)-specific endoribonuclease...    66   9e-18
ref|XP_004245847.1| PREDICTED: poly(U)-specific endoribonuclease...    61   6e-16

>ref|XP_004245846.1| PREDICTED: poly(U)-specific endoribonuclease-B-like isoform 1
           [Solanum lycopersicum]
          Length = 432

 Score = 65.9 bits (159), Expect(2) = 5e-21
 Identities = 27/32 (84%), Positives = 31/32 (96%)
 Frame = +1

Query: 358 QPSQNIQASPQGYERNEDERRDNFNQSCWNQK 453
           +PSQN++ASPQGY+RNEDERRDN NQSCWNQK
Sbjct: 75  KPSQNMRASPQGYQRNEDERRDNVNQSCWNQK 106



 Score = 61.2 bits (147), Expect(2) = 5e-21
 Identities = 25/33 (75%), Positives = 28/33 (84%)
 Frame = +2

Query: 506 WYPQEDEGNNDSWETVQKKPTKRHQQVKMDYWD 604
           W  +E EGN+D WETVQKKPTKRHQQVKMD W+
Sbjct: 103 WNQKEGEGNSDGWETVQKKPTKRHQQVKMDSWN 135


>ref|XP_006358620.1| PREDICTED: poly(U)-specific endoribonuclease-B-like [Solanum
           tuberosum]
          Length = 426

 Score = 65.9 bits (159), Expect(2) = 9e-18
 Identities = 27/33 (81%), Positives = 29/33 (87%)
 Frame = +2

Query: 506 WYPQEDEGNNDSWETVQKKPTKRHQQVKMDYWD 604
           W  +EDEGNND WETVQKKPTKRHQQVKMD W+
Sbjct: 97  WKQKEDEGNNDGWETVQKKPTKRHQQVKMDSWN 129



 Score = 50.4 bits (119), Expect(2) = 9e-18
 Identities = 21/26 (80%), Positives = 23/26 (88%)
 Frame = +1

Query: 376 QASPQGYERNEDERRDNFNQSCWNQK 453
           +ASPQGY+RNEDERRDN NQS W QK
Sbjct: 75  KASPQGYQRNEDERRDNVNQSSWKQK 100


>ref|XP_004245847.1| PREDICTED: poly(U)-specific endoribonuclease-B-like isoform 2
           [Solanum lycopersicum]
          Length = 422

 Score = 61.2 bits (147), Expect(2) = 6e-16
 Identities = 25/33 (75%), Positives = 28/33 (84%)
 Frame = +2

Query: 506 WYPQEDEGNNDSWETVQKKPTKRHQQVKMDYWD 604
           W  +E EGN+D WETVQKKPTKRHQQVKMD W+
Sbjct: 93  WNQKEGEGNSDGWETVQKKPTKRHQQVKMDSWN 125



 Score = 48.9 bits (115), Expect(2) = 6e-16
 Identities = 19/22 (86%), Positives = 21/22 (95%)
 Frame = +1

Query: 388 QGYERNEDERRDNFNQSCWNQK 453
           +GY+RNEDERRDN NQSCWNQK
Sbjct: 75  KGYQRNEDERRDNVNQSCWNQK 96