BLASTX nr result

ID: Atropa21_contig00038607 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00038607
         (1138 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006354689.1| PREDICTED: uncharacterized protein LOC102605...    69   3e-09
ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein A...    62   6e-07

>ref|XP_006354689.1| PREDICTED: uncharacterized protein LOC102605437 [Solanum tuberosum]
          Length = 333

 Score = 69.3 bits (168), Expect = 3e-09
 Identities = 37/87 (42%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
 Frame = +1

Query: 22  VINIVESIWEVPWQVINIVEEIWRIIRGKTVVITHIYREGNKLVHHLSNRALDESEISAI 201
           +I I+  IWEVPW ++ I+E+IW + +   V I H+YREGN L  +L+N A     I   
Sbjct: 240 LIKILTRIWEVPWSIVVIIEDIWGLFQECHVQIQHVYREGNTLADYLANLAFFNPNIIVY 299

Query: 202 -GFQELRHPWQKIVNGDKLNEPYLSIR 279
             F EL    +KIVN DK   P + IR
Sbjct: 300 NSFAELPSQAKKIVNLDKQQLPNIKIR 326


>ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            tuberosum]
          Length = 885

 Score = 61.6 bits (148), Expect = 6e-07
 Identities = 35/84 (41%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
 Frame = +1

Query: 31   IVESIWEVPWQVINIVEEIWRIIRGKTVVITHIYREGNKLVHHLSNRALD-ESEISAIGF 207
            I++  W VPW++   VEEI  I+      ITHI+REGN L   L+N A++ ++E     F
Sbjct: 784  IIQQTWRVPWKIAEKVEEIREIMEKIKAKITHIFREGNSLADSLANIAIESQAEHQYSCF 843

Query: 208  QELRHPWQKIVNGDKLNEPYLSIR 279
            QEL    ++I+N DK   P L IR
Sbjct: 844  QELPLKERRILNIDKAQIPTLRIR 867


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