BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00038508
         (559 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006343535.1| PREDICTED: uncharacterized protein LOC102578...   170   2e-40
ref|XP_006605005.1| PREDICTED: uncharacterized protein LOC102669...   141   9e-32
ref|XP_006584407.1| PREDICTED: uncharacterized protein LOC102670...   136   3e-30
gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp...   131   1e-28
gb|AAC28209.1| contains similarity to reverse transcriptases [Ar...   120   3e-25
ref|XP_004250583.1| PREDICTED: uncharacterized protein LOC101261...   119   4e-25
gb|AAF63108.1|AC006423_9 Hypothetical protein [Arabidopsis thali...   118   1e-24
ref|XP_004963982.1| PREDICTED: uncharacterized protein LOC101777...   116   3e-24
gb|AAU10819.1| putative polyprotein [Oryza sativa Japonica Group...   114   2e-23
gb|AAF79692.1|AC022314_33 F9C16.1 [Arabidopsis thaliana]              113   3e-23
gb|AEJ07955.1| putative polyprotein [Sorghum propinquum]              113   3e-23
ref|NP_001174325.1| Os05g0293200 [Oryza sativa Japonica Group] g...   113   4e-23
ref|XP_006605008.1| PREDICTED: uncharacterized protein LOC102670...   111   1e-22
ref|XP_004986808.1| PREDICTED: uncharacterized protein LOC101773...   111   1e-22
gb|ABA99152.1| retrotransposon protein, putative, unclassified [...   111   1e-22
ref|XP_004966848.1| PREDICTED: uncharacterized protein LOC101777...   110   2e-22
gb|AAM08751.1|AC025098_18 Putative copia-type polyprotein [Oryza...   110   3e-22
gb|ABB47941.2| retrotransposon protein, putative, unclassified [...   110   3e-22
gb|AAG13591.2|AC051633_7 putative gag/pol polyprotein [Oryza sat...   110   3e-22
gb|AAM74347.1|AC115686_14 Putative retroelement [Oryza sativa Ja...   109   4e-22

>ref|XP_006343535.1| PREDICTED: uncharacterized protein LOC102578284 [Solanum tuberosum]
          Length = 614

 Score =  170 bits (430), Expect = 2e-40
 Identities = 89/185 (48%), Positives = 110/185 (59%)
 Frame = -1

Query: 556 SMNLQQPDDNWYMDSGATSHLTRTPDNLSMLSALKHPQYITVGNDHRIPIKGYGTTYTKP 377
           ++ +  PD NWYMD+GATSH+T    NL+    + +   I VGN   IPI GYG T    
Sbjct: 370 TLGITPPDANWYMDTGATSHMTSAQGNLTSYFNISNKCGIMVGNGQPIPIHGYGHTKLSF 429

Query: 376 PHPPFFLNGVMYAPNIIKNLISVRKFTRHNFVSVDFDPFDFTVKDLRTGTPLMRCNSTGN 197
           P PP  LN V++AP+++KNL+S+RKFT  N VSV+FDPF F VKD +TG P+MRC S G 
Sbjct: 430 PCPPLQLNNVLHAPHLVKNLVSIRKFTTDNSVSVEFDPFGFPVKDFQTGRPVMRCESRGK 489

Query: 196 LYXXXXXXXXXXXXXXXXXXXXPDTWHNRLGHPGAPVFNFLRGNDFIKCNNGKLVQNWVS 17
           LY                    P  WH+RLGHPGAPV N LR N  I+CN  K  +   S
Sbjct: 490 LY----PITNPRAFPSTFAALAPSLWHDRLGHPGAPVLNSLRKNKLIECNQIKDSRICHS 545

Query: 16  CSLGK 2
           C LGK
Sbjct: 546 CPLGK 550


>ref|XP_006605005.1| PREDICTED: uncharacterized protein LOC102669234 [Glycine max]
          Length = 922

 Score =  141 bits (356), Expect = 9e-32
 Identities = 72/153 (47%), Positives = 89/153 (58%)
 Frame = -1

Query: 556 SMNLQQPDDNWYMDSGATSHLTRTPDNLSMLSALKHPQYITVGNDHRIPIKGYGTTYTKP 377
           ++ +  P  NWYMD+GATSH+T T  NL+    + + + I VGN   IPI GY  T    
Sbjct: 296 TLGITSPYPNWYMDTGATSHMTSTSGNLTSYFNMSNHRGIIVGNGQSIPIHGYSQTNLPS 355

Query: 376 PHPPFFLNGVMYAPNIIKNLISVRKFTRHNFVSVDFDPFDFTVKDLRTGTPLMRCNSTGN 197
           PHPP  L  V++AP +IKNL+SVRKFT  N V+V+FDPF F VKD +TG PLMRC S G 
Sbjct: 356 PHPPLALKNVLHAPKLIKNLVSVRKFTTDNSVTVEFDPFGFFVKDFQTGMPLMRCESQGA 415

Query: 196 LYXXXXXXXXXXXXXXXXXXXXPDTWHNRLGHP 98
           LY                    P  WH +LGHP
Sbjct: 416 LY-PITESTTPATSSSTFAALAPSLWHKQLGHP 447


>ref|XP_006584407.1| PREDICTED: uncharacterized protein LOC102670170 [Glycine max]
          Length = 466

 Score =  136 bits (343), Expect = 3e-30
 Identities = 70/161 (43%), Positives = 93/161 (57%)
 Frame = -1

Query: 556 SMNLQQPDDNWYMDSGATSHLTRTPDNLSMLSALKHPQYITVGNDHRIPIKGYGTTYTKP 377
           ++N+  PD NWYMD+GATSH+  T  NL+    + + + IT+GN   IPI+GYG      
Sbjct: 39  TLNITSPDPNWYMDTGATSHMMSTSGNLTSYFNMNNHRGITIGNGQSIPIRGYGQINLPS 98

Query: 376 PHPPFFLNGVMYAPNIIKNLISVRKFTRHNFVSVDFDPFDFTVKDLRTGTPLMRCNSTGN 197
           PHPP  L   ++A  +IKNL+SVRKFT  N V+V+FD F F VKD +TG PLMRC S  +
Sbjct: 99  PHPPLALKNSLHASKLIKNLVSVRKFTTDNSVTVEFDSFGFFVKDFQTGMPLMRCESR-D 157

Query: 196 LYXXXXXXXXXXXXXXXXXXXXPDTWHNRLGHPGAPVFNFL 74
           +                     P  WH +LGHPG   ++FL
Sbjct: 158 VLNPIIESTTPATSSSTFAALAPSLWHEQLGHPG--TYDFL 196


>gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1296

 Score =  131 bits (329), Expect = 1e-28
 Identities = 70/186 (37%), Positives = 94/186 (50%)
 Frame = -1

Query: 559 SSMNLQQPDDNWYMDSGATSHLTRTPDNLSMLSALKHPQYITVGNDHRIPIKGYGTTYTK 380
           ++M LQ+PD NWYMDS ATSH+T    NL           +TVGN    P++  G     
Sbjct: 351 NTMTLQEPDPNWYMDSAATSHITSNIGNLQSTFNTSTMPLVTVGNGSLAPVETIGHGTLS 410

Query: 379 PPHPPFFLNGVMYAPNIIKNLISVRKFTRHNFVSVDFDPFDFTVKDLRTGTPLMRCNSTG 200
            P   F L  V+  P I+KNL+SVRKF   N+ +++FDPF F+VKDL+T   L+RC+S+G
Sbjct: 411 YPSRSFSLRNVLVCPAIVKNLVSVRKFVTDNWCTIEFDPFGFSVKDLKTRNKLLRCDSSG 470

Query: 199 NLYXXXXXXXXXXXXXXXXXXXXPDTWHNRLGHPGAPVFNFLRGNDFIKCNNGKLVQNWV 20
            LY                       WH RLGHP + + + L  +  I      L     
Sbjct: 471 PLYSVTPSSYPSSHHALAATTSDSFIWHRRLGHPSSTLLSHLLSSLSISVPKTDLTSLCQ 530

Query: 19  SCSLGK 2
           +C LGK
Sbjct: 531 ACQLGK 536


>gb|AAC28209.1| contains similarity to reverse transcriptases [Arabidopsis
           thaliana] gi|7267168|emb|CAB77880.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 467

 Score =  120 bits (300), Expect = 3e-25
 Identities = 65/166 (39%), Positives = 84/166 (50%), Gaps = 5/166 (3%)
 Frame = -1

Query: 535 DDNWYMDSGATSHLTRTPDNLSMLSALKHPQYITVGNDHRIPIKGYGTTYTKPPHPPFFL 356
           D +WYMD+GAT+HLT  P  L  L        + VGN   +P K  G ++      P  L
Sbjct: 297 DASWYMDTGATTHLTAQPGTLHSLFNSSSSPSVVVGNGSSVPTKAIGYSFLPSKIRPLHL 356

Query: 355 NGVMYAPNIIKNLISVRKFTRHNFVSVDFDPFDFTVKDLRTGTPLMRCNSTGNLY----- 191
           + V+  P+IIKNL+SVR+FT+ N+VSV+FDPF F++KD  T T L+RCNS G LY     
Sbjct: 357 HNVLVCPSIIKNLVSVRQFTKDNYVSVEFDPFGFSIKDFNTWTNLLRCNSDGPLYSITSP 416

Query: 190 XXXXXXXXXXXXXXXXXXXXPDTWHNRLGHPGAPVFNFLRGNDFIK 53
                                  WH RLGH G      L  +  IK
Sbjct: 417 PLSSSSSSSPPQVMVATVPDSSLWHRRLGHLGNTTLQSLISSRLIK 462


>ref|XP_004250583.1| PREDICTED: uncharacterized protein LOC101261089 [Solanum
           lycopersicum]
          Length = 1140

 Score =  119 bits (299), Expect = 4e-25
 Identities = 64/117 (54%), Positives = 80/117 (68%), Gaps = 2/117 (1%)
 Frame = -1

Query: 535 DDNWYMDSGATSHLTRTPDNLSMLSALKHP--QYITVGNDHRIPIKGYGTTYTKPPHPPF 362
           D N+YMD+GATSH+T +  NLS    L +     ITVGN  +IPIKGYG           
Sbjct: 341 DPNYYMDTGATSHMTNSQGNLSPYFNLSNHVNNAITVGNGSKIPIKGYGHECLN--QNTL 398

Query: 361 FLNGVMYAPNIIKNLISVRKFTRHNFVSVDFDPFDFTVKDLRTGTPLMRCNSTGNLY 191
            L  V++ P IIKNLISVRKFT  N VSV+FDPF F+VKDL+TG+ ++RCNS+G+LY
Sbjct: 399 QLKNVLHVPKIIKNLISVRKFTTDNHVSVEFDPFGFSVKDLQTGSKIVRCNSSGDLY 455


>gb|AAF63108.1|AC006423_9 Hypothetical protein [Arabidopsis thaliana]
          Length = 474

 Score =  118 bits (295), Expect = 1e-24
 Identities = 66/180 (36%), Positives = 90/180 (50%), Gaps = 1/180 (0%)
 Frame = -1

Query: 538 PDDNWYMDSGATSHLTRTPDNLSMLSALKH-PQYITVGNDHRIPIKGYGTTYTKPPHPPF 362
           PD  WYMDSGAT++LT    N   LS      + +  GN   IP+   G+ +      P 
Sbjct: 278 PDSQWYMDSGATAYLTSGAGNNLQLSLYPSIGKSVIFGNGGCIPVTATGSLFIANKPRPL 337

Query: 361 FLNGVMYAPNIIKNLISVRKFTRHNFVSVDFDPFDFTVKDLRTGTPLMRCNSTGNLYXXX 182
            L+ V+  P+IIKNL+SVR+FT+ N  S++FDPF F++KDLRT   L+R +S+G+LY   
Sbjct: 338 TLHNVLVTPDIIKNLVSVRRFTKDNKCSIEFDPFGFSIKDLRTKRTLLRNDSSGDLYPVF 397

Query: 181 XXXXXXXXXXXXXXXXXPDTWHNRLGHPGAPVFNFLRGNDFIKCNNGKLVQNWVSCSLGK 2
                             D WH RL HP   V   L    +   N   L     +C +GK
Sbjct: 398 PAFNKTSAPASTFLAQSSDIWHRRLPHPSNDVLKTLISYSYFHPNKKTLTLTCNACQIGK 457


>ref|XP_004963982.1| PREDICTED: uncharacterized protein LOC101777276 [Setaria italica]
          Length = 1188

 Score =  116 bits (291), Expect = 3e-24
 Identities = 64/170 (37%), Positives = 89/170 (52%), Gaps = 1/170 (0%)
 Frame = -1

Query: 556 SMNLQQPDDNWYMDSGATSHLTRTPDNL-SMLSALKHPQYITVGNDHRIPIKGYGTTYTK 380
           S+N+  P + WY+DSGA SH+      L S   +  HP  I VGN    P+   G++   
Sbjct: 356 SLNVPSPSNEWYIDSGAGSHMANNAGILTSSYPSSSHPSSIIVGNGASFPVTSVGSSSFV 415

Query: 379 PPHPPFFLNGVMYAPNIIKNLISVRKFTRHNFVSVDFDPFDFTVKDLRTGTPLMRCNSTG 200
            P     L+ V+ AP IIKNLISVR+FT  N  S++FDPF  ++KDL+T + + RCNS+G
Sbjct: 416 TPRRSLVLSNVLVAPGIIKNLISVRRFTIDNNCSIEFDPFGLSMKDLQTRSVIARCNSSG 475

Query: 199 NLYXXXXXXXXXXXXXXXXXXXXPDTWHNRLGHPGAPVFNFLRGNDFIKC 50
           +LY                       WH RLGH G+   + L  ++ I C
Sbjct: 476 DLYPFFVAPATSTTALAATTSTSA-LWHRRLGHLGSDALSKLISSNVISC 524


>gb|AAU10819.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|53981353|gb|AAV24907.1| hypothetical protein [Oryza
            sativa Japonica Group]
          Length = 1679

 Score =  114 bits (285), Expect = 2e-23
 Identities = 73/190 (38%), Positives = 95/190 (50%), Gaps = 4/190 (2%)
 Frame = -1

Query: 559  SSMNLQQPDDN-WYMDSGATSHLTRTPDNLSMLSALK--HPQYITVGNDHRIPIKGYGTT 389
            ++  L QP  N WYMD+GAT+H+T     LS+        P +I VGN   IP+   G +
Sbjct: 548  NTTTLHQPATNDWYMDTGATAHMTSDTGILSLSHPPNPNSPSHIVVGNGSTIPVTSIGHS 607

Query: 388  YTKPPHPPFFLNGVMYAPNIIKNLISVRKFTRHNFVSVDFDPFDFTVKDLRTGTPLMRCN 209
                P+  F L  ++ +P IIKNLISVR+F   N+ SV+FDPF F+VKDLRT T + R N
Sbjct: 608  KICHPNCSFTLRDILCSPAIIKNLISVRRFVIDNWCSVEFDPFGFSVKDLRTRTVIARFN 667

Query: 208  STGNLYXXXXXXXXXXXXXXXXXXXXPD-TWHNRLGHPGAPVFNFLRGNDFIKCNNGKLV 32
            S+G LY                     D  WH RLGH G    N L     +    G L 
Sbjct: 668  SSGPLYSLHHALPPPPAATALLANSSTDLLWHRRLGHLGHDALNRLAA--VVPMTRGDLT 725

Query: 31   QNWVSCSLGK 2
                +C LG+
Sbjct: 726  GVCHACQLGR 735


>gb|AAF79692.1|AC022314_33 F9C16.1 [Arabidopsis thaliana]
          Length = 820

 Score =  113 bits (283), Expect = 3e-23
 Identities = 62/158 (39%), Positives = 83/158 (52%), Gaps = 1/158 (0%)
 Frame = -1

Query: 538 PDDNWYMDSGATSHLTRTPDNLSMLSALKH-PQYITVGNDHRIPIKGYGTTYTKPPHPPF 362
           PD  WYMDSGAT++LT    N   LS      + +  GN   IP+   G+ +      P 
Sbjct: 274 PDSQWYMDSGATAYLTSGAGNNLQLSLYPSIGKSVIFGNGGCIPVTATGSLFIANKPRPL 333

Query: 361 FLNGVMYAPNIIKNLISVRKFTRHNFVSVDFDPFDFTVKDLRTGTPLMRCNSTGNLYXXX 182
            L+ V+  P+IIKNL+SVR+FT+ N  S++FDPF F++KDLRT   L+R +S+G+LY   
Sbjct: 334 TLHNVLVTPDIIKNLVSVRRFTKDNKCSIEFDPFGFSIKDLRTKRTLLRNDSSGDLYPVF 393

Query: 181 XXXXXXXXXXXXXXXXXPDTWHNRLGHPGAPVFNFLRG 68
                             D WH RL HP   V   L G
Sbjct: 394 PAFNKTSAPASTFLAQSSDIWHRRLPHPSNDVLKTLSG 431


>gb|AEJ07955.1| putative polyprotein [Sorghum propinquum]
          Length = 826

 Score =  113 bits (283), Expect = 3e-23
 Identities = 69/189 (36%), Positives = 92/189 (48%), Gaps = 3/189 (1%)
 Frame = -1

Query: 559  SSMNLQQP-DDNWYMDSGATSHLTRTPDNLSMLS--ALKHPQYITVGNDHRIPIKGYGTT 389
            ++M L  P    WY DSGA SH++     LS  S   L  P  I VGN   +P+   G+ 
Sbjct: 450  NTMTLNPPAPSEWYADSGAGSHMSSDAGILSTTSPPTLSTPSSIIVGNGALLPVTTIGSR 509

Query: 388  YTKPPHPPFFLNGVMYAPNIIKNLISVRKFTRHNFVSVDFDPFDFTVKDLRTGTPLMRCN 209
                PH    LN V+ +P+IIKNLIS+R+FT  N   ++FDPF  +VKDL+T   + RCN
Sbjct: 510  IFSFPHRNLVLNKVLVSPHIIKNLISIRRFTTDNNCFIEFDPFGLSVKDLQTRNVIARCN 569

Query: 208  STGNLYXXXXXXXXXXXXXXXXXXXXPDTWHNRLGHPGAPVFNFLRGNDFIKCNNGKLVQ 29
            S+G+LY                       WH RLGH G    + L  +  I CN      
Sbjct: 570  SSGDLY----PFFPPATSATALLAAPASLWHRRLGHLGREALSQLVSSSAISCNKDDDYH 625

Query: 28   NWVSCSLGK 2
               +C LG+
Sbjct: 626  LCHACQLGR 634


>ref|NP_001174325.1| Os05g0293200 [Oryza sativa Japonica Group]
           gi|255676213|dbj|BAH93053.1| Os05g0293200 [Oryza sativa
           Japonica Group]
          Length = 1621

 Score =  113 bits (282), Expect = 4e-23
 Identities = 60/148 (40%), Positives = 77/148 (52%), Gaps = 2/148 (1%)
 Frame = -1

Query: 532 DNWYMDSGATSHLTRTPDNLSMLSALKHPQYITVGNDHRIPIKGYGTTYTKPPHPPFFLN 353
           D WYMDSGA+SH+T     L++         + VGN   +PI   G+     PH  F LN
Sbjct: 544 DEWYMDSGASSHMTSNTGTLTLAPTSPTSSCLVVGNGSLLPITATGSARINYPHYSFLLN 603

Query: 352 GVMYAPNIIKNLISVRKFTRHNFVSVDFDPFDFTVKDLRTGTPLMRCNSTGNLY--XXXX 179
            V+ +P IIKNLIS  +FTR N+ SV+ DPF  +VKD  T T ++RCNS+ +LY      
Sbjct: 604 NVLVSPAIIKNLISAHRFTRDNWCSVELDPFGLSVKDYPTKTKIVRCNSSEDLYPFPVDA 663

Query: 178 XXXXXXXXXXXXXXXXPDTWHNRLGHPG 95
                            D WH RLGH G
Sbjct: 664 FSSAASACAFIATESTIDLWHRRLGHIG 691


>ref|XP_006605008.1| PREDICTED: uncharacterized protein LOC102670172 [Glycine max]
          Length = 363

 Score =  111 bits (278), Expect = 1e-22
 Identities = 52/105 (49%), Positives = 70/105 (66%)
 Frame = -1

Query: 556 SMNLQQPDDNWYMDSGATSHLTRTPDNLSMLSALKHPQYITVGNDHRIPIKGYGTTYTKP 377
           ++ +  P+ NWYMD+ ATSH+T T +NL+    + + + ITVGN   IPI GYG T    
Sbjct: 258 TLGITSPNPNWYMDTSATSHMTSTSNNLTSYFNMSNHRGITVGNGQSIPIHGYGQTNLPS 317

Query: 376 PHPPFFLNGVMYAPNIIKNLISVRKFTRHNFVSVDFDPFDFTVKD 242
           PHP   L  V++AP +IKNL+ VRKFT  N V+V+FD F F+VKD
Sbjct: 318 PHPSLALKNVLHAPKLIKNLVLVRKFTTDNSVTVEFDSFGFSVKD 362


>ref|XP_004986808.1| PREDICTED: uncharacterized protein LOC101773259 [Setaria italica]
          Length = 1950

 Score =  111 bits (277), Expect = 1e-22
 Identities = 69/183 (37%), Positives = 94/183 (51%), Gaps = 3/183 (1%)
 Frame = -1

Query: 541  QPDDNWYMDSGATSHLTRTPDNLSMLSALKHPQY--ITVGNDHRIPIKGYGTTYTKPPHP 368
            Q +  W +DSGA++H+T +     ML+    P    ITVGN   IP+   G +    P  
Sbjct: 991  QGNSPWVVDSGASTHMTSSD---GMLTQRLPPSISSITVGNGTTIPVTSRGHSVLPTPTT 1047

Query: 367  PFFLNGVMYAPNIIKNLISVRKFTRHNFVSVDFDPFDFTVKDLRTGTPLMRCNSTGNLYX 188
             F LN ++ AP+I++NL+SVR+FTR N  S +FD   F+VKDLRTG  ++RCNS G+LY 
Sbjct: 1048 NFALNNILVAPSIVRNLLSVRQFTRDNSCSFEFDAHGFSVKDLRTGRVILRCNSDGDLY- 1106

Query: 187  XXXXXXXXXXXXXXXXXXXPDTWHNRLGHPGAPVFNFLRGNDFIKCNNGKLVQNWV-SCS 11
                                  WH RLGHP       L     + CN  K+ ++   SC 
Sbjct: 1107 -TMPAGTPVAPSHAFLAASSTLWHQRLGHPAPAALERLNKIHVVSCN--KVDRSLCHSCQ 1163

Query: 10   LGK 2
            LGK
Sbjct: 1164 LGK 1166


>gb|ABA99152.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 989

 Score =  111 bits (277), Expect = 1e-22
 Identities = 68/158 (43%), Positives = 87/158 (55%), Gaps = 3/158 (1%)
 Frame = -1

Query: 559 SSMNLQQPDDN-WYMDSGATSHLTRTPDNLSMLSALKHP--QYITVGNDHRIPIKGYGTT 389
           S+M LQQP +N WY DSGATSH+T     LS  ++ ++P    I VGN   +PI   GTT
Sbjct: 156 STMTLQQPPNNEWYFDSGATSHMTSDSHTLSHPTSSRYPTPSSIVVGNGSLLPITATGTT 215

Query: 388 YTKPPHPPFFLNGVMYAPNIIKNLISVRKFTRHNFVSVDFDPFDFTVKDLRTGTPLMRCN 209
                     LN V+ +P +IKNLISVR+FT  N  +V+FDP   +VKDL +   ++RCN
Sbjct: 216 TLTDS-----LNNVLVSPRLIKNLISVRQFTTDNNCAVEFDPAGCSVKDLESQKVIIRCN 270

Query: 208 STGNLYXXXXXXXXXXXXXXXXXXXXPDTWHNRLGHPG 95
           S+G LY                    P  WH RLGHPG
Sbjct: 271 SSGPLY-----PLHLPSAAALAAGSSPSLWHRRLGHPG 303


>ref|XP_004966848.1| PREDICTED: uncharacterized protein LOC101777861 [Setaria italica]
          Length = 2179

 Score =  110 bits (275), Expect = 2e-22
 Identities = 67/184 (36%), Positives = 90/184 (48%), Gaps = 5/184 (2%)
 Frame = -1

Query: 538 PDDNWYMDSGATSHLTRTPDNLSMLSAL-----KHPQYITVGNDHRIPIKGYGTTYTKPP 374
           P   WY DSGA +H+    +N  +LS+L       P  I V N   +P+   G+      
Sbjct: 432 PSGEWYADSGAGAHMV---NNAGILSSLHPPLSSSPSSIIVCNGASLPVTSIGSHSFPTT 488

Query: 373 HPPFFLNGVMYAPNIIKNLISVRKFTRHNFVSVDFDPFDFTVKDLRTGTPLMRCNSTGNL 194
             P  L+ V+ +PNIIKNLISVR+FT  N  S++FDPF  +VKDL+T + + RCNSTG+L
Sbjct: 489 RRPLVLSNVLVSPNIIKNLISVRRFTIDNNCSIEFDPFGLSVKDLQTRSVIARCNSTGDL 548

Query: 193 YXXXXXXXXXXXXXXXXXXXXPDTWHNRLGHPGAPVFNFLRGNDFIKCNNGKLVQNWVSC 14
           Y                       WH RLGH G      L  ++ I CN         +C
Sbjct: 549 Y-PFFPAPSSTTAALTTATSSTSLWHRRLGHLGHAALFQLISSNVISCNKHNTDHVCHAC 607

Query: 13  SLGK 2
            LG+
Sbjct: 608 QLGR 611


>gb|AAM08751.1|AC025098_18 Putative copia-type polyprotein [Oryza sativa Japonica Group]
          Length = 1803

 Score =  110 bits (274), Expect = 3e-22
 Identities = 57/161 (35%), Positives = 90/161 (55%)
 Frame = -1

Query: 529 NWYMDSGATSHLTRTPDNLSMLSALKHPQYITVGNDHRIPIKGYGTTYTKPPHPPFFLNG 350
           +W++D+GA++H++ TP  L+    L     ITVGN  ++P+    +T+         L+ 
Sbjct: 367 DWFLDTGASAHMSSTPGILAHPRPLPFSSCITVGNGAKLPVTHTASTHIPTSSTDLHLHN 426

Query: 349 VMYAPNIIKNLISVRKFTRHNFVSVDFDPFDFTVKDLRTGTPLMRCNSTGNLYXXXXXXX 170
           V+ +P +IKNLISV+K TR N VS++FDP  F++KDL+T    +RC+S G+LY       
Sbjct: 427 VLVSPPLIKNLISVKKLTRDNNVSIEFDPTGFSIKDLQTQVVKLRCDSPGDLY---PLRL 483

Query: 169 XXXXXXXXXXXXXPDTWHNRLGHPGAPVFNFLRGNDFIKCN 47
                         + WH RLGHPG+   + + G+   +CN
Sbjct: 484 PSPHALSATSSPSVEHWHLRLGHPGSASLSKVLGSFDFQCN 524


>gb|ABB47941.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1414

 Score =  110 bits (274), Expect = 3e-22
 Identities = 57/161 (35%), Positives = 90/161 (55%)
 Frame = -1

Query: 529 NWYMDSGATSHLTRTPDNLSMLSALKHPQYITVGNDHRIPIKGYGTTYTKPPHPPFFLNG 350
           +W++D+GA++H++ TP  L+    L     ITVGN  ++P+    +T+         L+ 
Sbjct: 367 DWFLDTGASAHMSSTPGILAHPRPLPFSSCITVGNGAKLPVTHTASTHIPTSSTDLHLHN 426

Query: 349 VMYAPNIIKNLISVRKFTRHNFVSVDFDPFDFTVKDLRTGTPLMRCNSTGNLYXXXXXXX 170
           V+ +P +IKNLISV+K TR N VS++FDP  F++KDL+T    +RC+S G+LY       
Sbjct: 427 VLVSPPLIKNLISVKKLTRDNNVSIEFDPTGFSIKDLQTQVVKLRCDSPGDLY---PLRL 483

Query: 169 XXXXXXXXXXXXXPDTWHNRLGHPGAPVFNFLRGNDFIKCN 47
                         + WH RLGHPG+   + + G+   +CN
Sbjct: 484 PSPHALSATSSPSVEHWHLRLGHPGSASLSKVLGSFDFQCN 524


>gb|AAG13591.2|AC051633_7 putative gag/pol polyprotein [Oryza sativa Japonica Group]
          Length = 1417

 Score =  110 bits (274), Expect = 3e-22
 Identities = 57/161 (35%), Positives = 90/161 (55%)
 Frame = -1

Query: 529 NWYMDSGATSHLTRTPDNLSMLSALKHPQYITVGNDHRIPIKGYGTTYTKPPHPPFFLNG 350
           +W++D+GA++H++ TP  L+    L     ITVGN  ++P+    +T+         L+ 
Sbjct: 367 DWFLDTGASAHMSSTPGILAHPRPLPFSSCITVGNGAKLPVTHTASTHIPTSSTDLHLHN 426

Query: 349 VMYAPNIIKNLISVRKFTRHNFVSVDFDPFDFTVKDLRTGTPLMRCNSTGNLYXXXXXXX 170
           V+ +P +IKNLISV+K TR N VS++FDP  F++KDL+T    +RC+S G+LY       
Sbjct: 427 VLVSPPLIKNLISVKKLTRDNNVSIEFDPTGFSIKDLQTQVVKLRCDSPGDLY---PLRL 483

Query: 169 XXXXXXXXXXXXXPDTWHNRLGHPGAPVFNFLRGNDFIKCN 47
                         + WH RLGHPG+   + + G+   +CN
Sbjct: 484 PSPHALSATSSPSVEHWHLRLGHPGSASLSKVLGSFDFQCN 524


>gb|AAM74347.1|AC115686_14 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1250

 Score =  109 bits (273), Expect = 4e-22
 Identities = 64/187 (34%), Positives = 98/187 (52%), Gaps = 1/187 (0%)
 Frame = -1

Query: 559 SSMNLQQPDDNWYMDSGATSHLTRTPDNLSMLSALKHPQYITVGNDHRIPIKGYGTTYTK 380
           + +++Q P   W +D+GATSH++ T D +          +ITVGN H IP+  +GT++  
Sbjct: 349 NQLSVQSPSP-WVLDTGATSHMSST-DGILDTRLPNSYTFITVGNGHTIPVICHGTSFLP 406

Query: 379 PPHPPFFLNGVMYAPNIIKNLISVRKFTRHNFVSVDFDPFDFTVKDLRTGTPLMRCNSTG 200
                F L  ++ AP++++NL+S+R+FTR N  S++FD F F+VK LRT   ++RCNS G
Sbjct: 407 IGTTKFDLKNILVAPSLVRNLLSIRQFTRDNNCSIEFDEFGFSVKGLRTRRVILRCNSRG 466

Query: 199 NLYXXXXXXXXXXXXXXXXXXXXPDTWHNRLGHPGAPVFNFLRGNDFIKCNNGKLVQNWV 20
           +LY                       WH RLGHP +     L     + C   K+  +  
Sbjct: 467 DLY--TLPIAAPAIAAHSFLAQSSTLWHRRLGHPSSAAIQTLHKLAILPCT--KIDHSLC 522

Query: 19  -SCSLGK 2
            +C LGK
Sbjct: 523 HACKLGK 529