BLASTX nr result
ID: Atropa21_contig00038293
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00038293
(789 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004233579.1| PREDICTED: uncharacterized protein LOC101260... 50 8e-10
ref|XP_004228797.1| PREDICTED: putative ribonuclease H protein A... 69 2e-09
ref|XP_006367184.1| PREDICTED: uncharacterized protein LOC102601... 60 9e-08
gb|AAT38805.1| hypothetical protein SDM1_47t00008 [Solanum demis... 60 9e-07
ref|XP_006357717.1| PREDICTED: uncharacterized protein LOC102595... 58 3e-06
ref|XP_004253520.1| PREDICTED: putative ribonuclease H protein A... 53 6e-06
>ref|XP_004233579.1| PREDICTED: uncharacterized protein LOC101260201 [Solanum
lycopersicum]
Length = 1531
Score = 50.4 bits (119), Expect(2) = 8e-10
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Frame = -2
Query: 632 KKELKQIYQLCGTKKNPFKLSFFTWRAIQDKLSTEERVTRFGIETDPICHCCNNNTQEPI 453
KK + I + + PFK++FF WRA++ KL T E V RFGI + C+CC +
Sbjct: 1268 KKSVNPINNIIWHNQIPFKVAFFIWRALRGKLPTNEGVHRFGIAAED-CYCCYQQGK--- 1323
Query: 452 IENIDHIFCLGEHAK---KFGNTLMGPWEL 372
++I+HI A K+ ++G +L
Sbjct: 1324 -DDINHILLTRNFANYIWKYHAAILGVTQL 1352
Score = 39.7 bits (91), Expect(2) = 8e-10
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = -3
Query: 343 LLIWWNFKTHNFIGKFITRIIPIIICWEL*KSRCNKKF----ESIKPFFYRTKTNIMSTL 176
L+ W N T N + K I +I+P ICW L K+RC K+ SIK Y +IM +
Sbjct: 1360 LMHWRNQHTINEVHKLIMQILPNYICWNLWKNRCGVKYGHKTSSIKRVQYGIFKDIMQVI 1419
>ref|XP_004228797.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 389
Score = 68.6 bits (166), Expect = 2e-09
Identities = 44/178 (24%), Positives = 81/178 (45%)
Frame = -3
Query: 703 DKAIWMQNTAGKFTVSSA*DTFRQRKSLNRYINCVERKKILLSSHFLLGGPFKTNCQQRK 524
D A WM + G+FT+ SA D R++K + NCV K + + F + ++ +
Sbjct: 3 DSAYWMPDDKGQFTIFSAWDIIRKKKDPDPIHNCVWHKNVPFKTSFFIWRALRSKLPTNE 62
Query: 523 GLQDLGLKQIQYATVATITPKNLLLRTLIISSA*ESMLRNLEIL*WALGN*LYQQKSQML 344
L G ++++ +L + ++I+ + + LG + +
Sbjct: 63 NLLKFGKEELECYCCYRKGKDDL--KHILITGNFAKYIWKIHTK--RLGIAIVNTNLRST 118
Query: 343 LLIWWNFKTHNFIGKFITRIIPIIICWEL*KSRCNKKFESIKPFFYRTKTNIMSTLLQ 170
LL W ++N + K I I+P IICW L K+RC+ K+ + YR ++ I ++Q
Sbjct: 119 LLSWRRLTSYNEVHKLILHILPNIICWNLWKNRCSAKYGNKPSSIYRVESGIFKDIMQ 176
>ref|XP_006367184.1| PREDICTED: uncharacterized protein LOC102601483 [Solanum tuberosum]
Length = 2019
Score = 58.9 bits (141), Expect(2) = 9e-08
Identities = 47/212 (22%), Positives = 84/212 (39%), Gaps = 7/212 (3%)
Frame = -3
Query: 781 RLQEQPDDDTKEKIRVFNIKIRMNKIDKAIWMQNTAGKFTVSSA*DTFRQRKSLNRYINC 602
+L +Q +D I ++ ++AIW N+ G FT SSA + R++++ +
Sbjct: 538 KLIQQAPNDYLANILSTKFYVQQEIPNQAIWKLNSDGNFTYSSAWNAIREKRTKTIFNTF 597
Query: 601 VERKKILLSSHFLLGGPFKTNCQQRKGLQDLGLKQIQYATVATITPKNLLLRTLIISSA* 422
+ K I + FLL + + L G + + + + T
Sbjct: 598 IWHKSIPFKTSFLLWRTLRGKLPTNEKLISFGNEPANCFCCCNRSGLDTIEHTFNKGQFA 657
Query: 421 ESMLRNLEIL*WALGN*LYQQKSQMLLLIWWNFKTHNFIGKFITRIIPIIICWEL*KSRC 242
+ ++ A G Y L++ WW+ K +N + I + PI ICW L K+RC
Sbjct: 658 TYLWKSFAA---AAGIITYHNSLPQLIMQWWSTKHNNAAYRLILQATPIFICWNLWKNRC 714
Query: 241 NKKF-------ESIKPFFYRTKTNIMSTLLQQ 167
K+ +K Y+ +M+T Q
Sbjct: 715 ASKYGGKQSNISRVKYAIYKDNYKLMTTTFPQ 746
Score = 24.3 bits (51), Expect(2) = 9e-08
Identities = 16/45 (35%), Positives = 19/45 (42%)
Frame = -1
Query: 171 SNKFERTRLGED*HIICTTCEVVIEQNSFKTVKWIKPPSHTIKLN 37
SN E +LGE CT VKWIKP +K+N
Sbjct: 751 SNWMELLQLGER----CT------HDTKVTMVKWIKPKKQWVKIN 785
Score = 59.7 bits (143), Expect = 1e-06
Identities = 32/75 (42%), Positives = 44/75 (58%)
Frame = -2
Query: 632 KKELKQIYQLCGTKKNPFKLSFFTWRAIQDKLSTEERVTRFGIETDPICHCCNNNTQEPI 453
K+E+ +I + K PFK SF WRAI+ KL T E++ FGIE CHCC++ P
Sbjct: 885 KREITKINKYTWHPKIPFKCSFLLWRAIRGKLPTNEKLLSFGIEPSD-CHCCHS----PG 939
Query: 452 IENIDHIFCLGEHAK 408
I+ I+H G+ AK
Sbjct: 940 IDTIEHTLNSGDFAK 954
>gb|AAT38805.1| hypothetical protein SDM1_47t00008 [Solanum demissum]
Length = 1155
Score = 60.1 bits (144), Expect = 9e-07
Identities = 25/57 (43%), Positives = 35/57 (61%)
Frame = -2
Query: 593 KKNPFKLSFFTWRAIQDKLSTEERVTRFGIETDPICHCCNNNTQEPIIENIDHIFCL 423
K PFK+SF TW+AI ++L T + R GI P C+CC NN +E+ +HIF +
Sbjct: 909 KDIPFKMSFLTWKAIINRLPTGAKFKRLGIPLSPTCYCCTNNNIPTTLESAEHIFMI 965
>ref|XP_006357717.1| PREDICTED: uncharacterized protein LOC102595469 [Solanum tuberosum]
Length = 1079
Score = 58.2 bits (139), Expect = 3e-06
Identities = 27/71 (38%), Positives = 41/71 (57%)
Frame = -2
Query: 593 KKNPFKLSFFTWRAIQDKLSTEERVTRFGIETDPICHCCNNNTQEPIIENIDHIFCLGEH 414
KK P K++F WR ++DK+ R+++ GI IC CC + P E+I+ C G+
Sbjct: 825 KKVPLKMNFMLWRVLRDKIPMNSRLSKMGISIASICCCC----RIPQEEDIEQFSCSGDF 880
Query: 413 AKKFGNTLMGP 381
AK+ +TL GP
Sbjct: 881 AKRIWSTLCGP 891
>ref|XP_004253520.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 468
Score = 53.1 bits (126), Expect(2) = 6e-06
Identities = 46/188 (24%), Positives = 77/188 (40%), Gaps = 2/188 (1%)
Frame = -3
Query: 787 WIRLQEQPDDDTKEKIRVFNIKIRMNKIDKAIWMQNTAGKFTVSSA*DTFRQRKSLNRYI 608
W +L I I + ++ D+AIW N G+F SA D R +K+ N +
Sbjct: 53 WRKLVRHAPITHLSNILATRIPQQQHRPDQAIWKLNIHGRFDCKSAWDEIRNKKAKNFFN 112
Query: 607 NCVERKKILLSSHFLLGGPFKTNCQQRKGLQDLGLKQIQYATVATITPKNLLLRTLIISS 428
+ + K I + FLL K + L + G++ + + + + S
Sbjct: 113 SALWHKFIPFKTSFLLWRTLKGKLPTNEKLSNFGIEPLPCFCCFDRAGMDTI-EHIFNSG 171
Query: 427 A*ESMLRNLEIL*WALGN*LYQQKSQMLLLI--WWNFKTHNFIGKFITRIIPIIICWEL* 254
+++ N +A + S + LI WW K +N K + + PI ICW L
Sbjct: 172 PFATIVWNF----FAATAGIQADHSTLPALIKQWWTTKPNNAGHKLLLQATPIFICWNLW 227
Query: 253 KSRCNKKF 230
K+RC K+
Sbjct: 228 KNRCACKY 235
Score = 23.9 bits (50), Expect(2) = 6e-06
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = -1
Query: 117 TCEVVIEQNSFKTVKWIKPPSHTIKLN 37
T E + V W KPP IK+N
Sbjct: 276 TSEKCVHNIKVYKVTWFKPPDQWIKIN 302