BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00038193
         (485 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006348079.1| PREDICTED: pentatricopeptide repeat-containi...   208   7e-52
ref|XP_004233795.1| PREDICTED: pentatricopeptide repeat-containi...   195   6e-48
ref|XP_006449088.1| hypothetical protein CICLE_v10018367mg [Citr...   113   3e-23
ref|XP_006467990.1| PREDICTED: pentatricopeptide repeat-containi...   111   1e-22
ref|XP_002518527.1| pentatricopeptide repeat-containing protein,...   110   1e-22
gb|EMJ13917.1| hypothetical protein PRUPE_ppa018797mg [Prunus pe...   110   2e-22
ref|XP_002305605.1| pentatricopeptide repeat-containing family p...   107   2e-21
ref|XP_002264956.1| PREDICTED: pentatricopeptide repeat-containi...    99   6e-19
ref|XP_006413812.1| hypothetical protein EUTSA_v10024760mg [Eutr...    77   2e-12
gb|EOY28616.1| Tetratricopeptide repeat-like superfamily protein...    77   3e-12
ref|NP_193849.2| pentatricopeptide repeat-containing protein [Ar...    73   3e-11
sp|O49558.2|PP331_ARATH RecName: Full=Pentatricopeptide repeat-c...    73   3e-11
ref|XP_006285106.1| hypothetical protein CARUB_v10006439mg [Caps...    72   6e-11
ref|XP_004293147.1| PREDICTED: pentatricopeptide repeat-containi...    54   3e-08
ref|XP_006338777.1| PREDICTED: pentatricopeptide repeat-containi...    54   7e-08
ref|XP_006287148.1| hypothetical protein CARUB_v10000318mg [Caps...    50   1e-07
ref|NP_195731.1| pentatricopeptide repeat-containing protein [Ar...    49   1e-07
ref|XP_002870941.1| pentatricopeptide repeat-containing protein ...    49   3e-07
ref|XP_002299984.2| hypothetical protein POPTR_0001s28320g [Popu...    46   7e-07
ref|XP_004237581.1| PREDICTED: pentatricopeptide repeat-containi...    52   1e-06

>ref|XP_006348079.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21170-like isoform X1 [Solanum tuberosum]
           gi|565362693|ref|XP_006348080.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g21170-like isoform X2 [Solanum tuberosum]
           gi|565362695|ref|XP_006348081.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g21170-like isoform X3 [Solanum tuberosum]
          Length = 584

 Score =  208 bits (529), Expect = 7e-52
 Identities = 109/161 (67%), Positives = 120/161 (74%)
 Frame = -1

Query: 485 LLSKNELRLGWCYYGSIIGNGVQENVVTWSLIAQMLCKDGKFEQIVPILDKGVCSPVMYN 306
           LLSKNELRLGWCY+GSII NGVQENVVTWSLIAQMLCKDGKFEQIVPILDKGVCSPVMYN
Sbjct: 202 LLSKNELRLGWCYFGSIIRNGVQENVVTWSLIAQMLCKDGKFEQIVPILDKGVCSPVMYN 261

Query: 305 LLIDCYSERGILKLHLII*MICIGNVLIPVLVLLAQFLMVLANITTPK*LNQ**VLSSMV 126
           +LIDCYSERG  +             + P     +  L         + +    V+SSMV
Sbjct: 262 ILIDCYSERGNFEAAFGYLNDMYSKCIDPTFNTFSSILDGACKYQNAEVIES--VMSSMV 319

Query: 125 EKGHLSKLVMSDYDSVIRKFSDMGKAYAAELFFREAYEKGI 3
           EKGHL K+V+ DYDSVIR+FSDMGKAYAAELFFREAYEK I
Sbjct: 320 EKGHLPKVVLPDYDSVIRRFSDMGKAYAAELFFREAYEKRI 360


>ref|XP_004233795.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21170-like [Solanum lycopersicum]
          Length = 584

 Score =  195 bits (495), Expect = 6e-48
 Identities = 103/161 (63%), Positives = 116/161 (72%)
 Frame = -1

Query: 485 LLSKNELRLGWCYYGSIIGNGVQENVVTWSLIAQMLCKDGKFEQIVPILDKGVCSPVMYN 306
           LLSKN+LRLGWCYYGSII NGVQENVVTWSLIAQMLCKDGKFE+IV ILDKGVCSP++YN
Sbjct: 202 LLSKNDLRLGWCYYGSIIRNGVQENVVTWSLIAQMLCKDGKFEKIVAILDKGVCSPLIYN 261

Query: 305 LLIDCYSERGILKLHLII*MICIGNVLIPVLVLLAQFLMVLANITTPK*LNQ**VLSSMV 126
           +LIDCYSERG                + P     +  L         + +    V+SSMV
Sbjct: 262 ILIDCYSERGKFDAAFGYLNDMYSERIDPTFSTFSSILDGACKYQNAQVIES--VMSSMV 319

Query: 125 EKGHLSKLVMSDYDSVIRKFSDMGKAYAAELFFREAYEKGI 3
           EKGHL K+V  DYDSVI+KFS +GKAYAAELFFREAYEK I
Sbjct: 320 EKGHLPKVVTPDYDSVIQKFSGIGKAYAAELFFREAYEKSI 360


>ref|XP_006449088.1| hypothetical protein CICLE_v10018367mg [Citrus clementina]
           gi|557551699|gb|ESR62328.1| hypothetical protein
           CICLE_v10018367mg [Citrus clementina]
          Length = 578

 Score =  113 bits (282), Expect = 3e-23
 Identities = 67/162 (41%), Positives = 96/162 (59%), Gaps = 1/162 (0%)
 Frame = -1

Query: 485 LLSKNELRLGWCYYGSIIGNGVQENVVTWSLIAQMLCKDGKFEQIVPILDKGVCSPVMYN 306
           L  +NE+RL  C YG++I +GV  N  TWSL+AQ+LC+ GKFE ++ +LD G+ S VMYN
Sbjct: 195 LYRQNEIRLASCLYGAMIRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYN 254

Query: 305 LLIDCYSERGILKLHL-II*MICIGNVLIPVLVLLAQFLMVLANITTPK*LNQ**VLSSM 129
           L+ID YS++G        +  +C G  L P     +  L         +  ++  ++  M
Sbjct: 255 LVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGGCRYEKTEVSDR--IVGLM 312

Query: 128 VEKGHLSKLVMSDYDSVIRKFSDMGKAYAAELFFREAYEKGI 3
           VEK  L K  +S  DSVI+K SDMGK YAAE+ F+ A ++ I
Sbjct: 313 VEKKLLPKNFLSGNDSVIQKLSDMGKTYAAEMIFKRACDEKI 354


>ref|XP_006467990.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21170-like [Citrus sinensis]
          Length = 538

 Score =  111 bits (277), Expect = 1e-22
 Identities = 65/162 (40%), Positives = 95/162 (58%), Gaps = 1/162 (0%)
 Frame = -1

Query: 485 LLSKNELRLGWCYYGSIIGNGVQENVVTWSLIAQMLCKDGKFEQIVPILDKGVCSPVMYN 306
           L  +NE+RL  C YG+++ +GV  N  TWSL+AQ+LC+ GKFE ++ +LD G+ S VMYN
Sbjct: 155 LYRQNEIRLASCLYGAMVRDGVSPNKFTWSLVAQILCRSGKFEVVLGLLDSGIYSSVMYN 214

Query: 305 LLIDCYSERGILKLHL-II*MICIGNVLIPVLVLLAQFLMVLANITTPK*LNQ**VLSSM 129
           L+ID YS++G        +  +C G  L P     +  L         +  ++  ++  M
Sbjct: 215 LVIDFYSKKGDFGAAFDRLNEMCNGRNLTPGFSTYSSILDGARRYEKTEVSDR--IVGLM 272

Query: 128 VEKGHLSKLVMSDYDSVIRKFSDMGKAYAAELFFREAYEKGI 3
           VEK  L K  +S  D VI+K SDMGK YAAE+ F+ A ++ I
Sbjct: 273 VEKKLLPKHFLSGNDYVIQKLSDMGKTYAAEMIFKRACDEKI 314


>ref|XP_002518527.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542372|gb|EEF43914.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 599

 Score =  110 bits (276), Expect = 1e-22
 Identities = 63/161 (39%), Positives = 92/161 (57%)
 Frame = -1

Query: 485 LLSKNELRLGWCYYGSIIGNGVQENVVTWSLIAQMLCKDGKFEQIVPILDKGVCSPVMYN 306
           L  ++E+RL WC+Y ++I  GV  +  TWSL+A +LCKDG FE+IV +LD G+C+ VMYN
Sbjct: 210 LQRESEIRLAWCFYCAMIRVGVLPDKFTWSLVAHILCKDGNFERIVKLLDMGICNSVMYN 269

Query: 305 LLIDCYSERGILKLHLII*MICIGNVLIPVLVLLAQFLMVLANITTPK*LNQ**VLSSMV 126
            ++D YS+ G  K             + P     +  L         + + +  V++ MV
Sbjct: 270 AVVDYYSKNGDFKAAFCRLNEMYDRKVEPGFSTYSSILDGACKCRNLQVIER--VVAIMV 327

Query: 125 EKGHLSKLVMSDYDSVIRKFSDMGKAYAAELFFREAYEKGI 3
            K  LSK   SDYDS+I+K  D+GK  AA LFF+ A ++ I
Sbjct: 328 GKQLLSKCPSSDYDSIIQKLCDLGKVSAATLFFKRACDERI 368


>gb|EMJ13917.1| hypothetical protein PRUPE_ppa018797mg [Prunus persica]
          Length = 584

 Score =  110 bits (275), Expect = 2e-22
 Identities = 61/158 (38%), Positives = 93/158 (58%)
 Frame = -1

Query: 476 KNELRLGWCYYGSIIGNGVQENVVTWSLIAQMLCKDGKFEQIVPILDKGVCSPVMYNLLI 297
           +NE+RL WC+YG +I NGV  +  TWSL+AQ+LCKDGKFE+I+ +LD  + + +MYNLL+
Sbjct: 189 ENEIRLAWCFYGLMIRNGVLPDRFTWSLVAQILCKDGKFERILRLLDLNIYNSMMYNLLV 248

Query: 296 DCYSERGILKLHLII*MICIGNVLIPVLVLLAQFLMVLANITTPK*LNQ**VLSSMVEKG 117
           D  S+ G                + P     +  L     +   + + +  V S MVEK 
Sbjct: 249 DGCSKSGNFDAAFSHLNEMCDRKVDPDFSTYSSILDGACKLGNVEVVER--VTSVMVEKK 306

Query: 116 HLSKLVMSDYDSVIRKFSDMGKAYAAELFFREAYEKGI 3
            L    +S+YDS++ K  D+GK +AAE+FF++A ++ I
Sbjct: 307 LLPNCPLSEYDSIVEKLCDLGKTHAAEMFFKKACDEKI 344


>ref|XP_002305605.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222848569|gb|EEE86116.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 564

 Score =  107 bits (267), Expect = 2e-21
 Identities = 65/161 (40%), Positives = 92/161 (57%)
 Frame = -1

Query: 485 LLSKNELRLGWCYYGSIIGNGVQENVVTWSLIAQMLCKDGKFEQIVPILDKGVCSPVMYN 306
           L  +NE++L WC+Y ++I +GV  + +TWSLIAQ+LCKDG FE+IV  LD GV + V+YN
Sbjct: 181 LQRENEIKLAWCFYCAMIKDGVLPDKLTWSLIAQILCKDGNFERIVKFLDMGVYNSVLYN 240

Query: 305 LLIDCYSERGILKLHLII*MICIGNVLIPVLVLLAQFLMVLANITTPK*LNQ**VLSSMV 126
            +IDC S+RG  +             L P     +  L         + + +  V+  M 
Sbjct: 241 GVIDCCSKRGDFEAAFERLNQMCERKLDPGFSTYSAILDGACKHGNEEVIER--VMDIMA 298

Query: 125 EKGHLSKLVMSDYDSVIRKFSDMGKAYAAELFFREAYEKGI 3
           EKG L K  +S  DSVI+KFSD+ K   A +FFR A ++ I
Sbjct: 299 EKGLLPKCPLSQCDSVIQKFSDLCKMNVATMFFRRACDEKI 339


>ref|XP_002264956.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21170-like [Vitis vinifera]
          Length = 569

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 60/162 (37%), Positives = 90/162 (55%), Gaps = 1/162 (0%)
 Frame = -1

Query: 485 LLSKNELRLGWCYYGSIIGNGVQENVVTWSLIAQMLCKDGKFEQIVPILDKG-VCSPVMY 309
           L  +NE++L WC  G++I NGV  + V    IA +LCK+GK E++V +LD   VC+ ++Y
Sbjct: 189 LQRENEIKLAWCVCGALIRNGVLPDYVR---IALILCKNGKLERVVRLLDMSIVCNALIY 245

Query: 308 NLLIDCYSERGILKLHLII*MICIGNVLIPVLVLLAQFLMVLANITTPK*LNQ**VLSSM 129
            L+IDCY ERG                  P        L         + +    V+ SM
Sbjct: 246 KLVIDCYCERGNFSAAFHYLNEMCNRKFDPGFCAYNSILDGACKYENDEVIQI--VMGSM 303

Query: 128 VEKGHLSKLVMSDYDSVIRKFSDMGKAYAAELFFREAYEKGI 3
           VEKG L KL++S+YDS+I+K  ++GK +AA++FF+ A  + I
Sbjct: 304 VEKGLLPKLLLSEYDSIIQKICNLGKTHAAQMFFKRARNEKI 345


>ref|XP_006413812.1| hypothetical protein EUTSA_v10024760mg [Eutrema salsugineum]
           gi|557114982|gb|ESQ55265.1| hypothetical protein
           EUTSA_v10024760mg [Eutrema salsugineum]
          Length = 584

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 47/160 (29%), Positives = 79/160 (49%)
 Frame = -1

Query: 485 LLSKNELRLGWCYYGSIIGNGVQENVVTWSLIAQMLCKDGKFEQIVPILDKGVCSPVMYN 306
           L+ + + RL  C Y +++ N V  + +TW L+AQ+LC+ GKF+ +V +++ GV S  +Y 
Sbjct: 198 LVKEKQFRLALCLYSAMVRNRVVSDGLTWDLVAQVLCEQGKFKSVVKLMETGVESCKIYT 257

Query: 305 LLIDCYSERGILKLHLII*MICIGNVLIPVLVLLAQFLMVLANITTPK*LNQ**VLSSMV 126
            L++CYS  G       +        L          L     +   + +++  VL  MV
Sbjct: 258 NLVECYSRNGEFDAVFSVIQEMDAKKLELSFCSYGYVLDDACRLGDSELIDK--VLGLMV 315

Query: 125 EKGHLSKLVMSDYDSVIRKFSDMGKAYAAELFFREAYEKG 6
           EK  L+    +  D +I +  DMGK +A+E+ F  A   G
Sbjct: 316 EKEFLTLDDSTVNDQIIERLCDMGKTFASEMLFHRACNGG 355


>gb|EOY28616.1| Tetratricopeptide repeat-like superfamily protein, putative
           [Theobroma cacao]
          Length = 578

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 45/157 (28%), Positives = 84/157 (53%)
 Frame = -1

Query: 473 NELRLGWCYYGSIIGNGVQENVVTWSLIAQMLCKDGKFEQIVPILDKGVCSPVMYNLLID 294
           NE++L W + G+++  G++ +  +WSL+AQ+LCK+GK  ++V +L+KG+ +  +Y+L+ID
Sbjct: 200 NEVKLAWGFLGAMLRVGIEPDQFSWSLVAQILCKNGKLGKVVGLLEKGIYNSEIYDLVID 259

Query: 293 CYSERGILKLHLII*MICIGNVLIPVLVLLAQFLMVLANITTPK*LNQ**VLSSMVEKGH 114
            YS+ G                +       +  L         + + +  +L  MVEK  
Sbjct: 260 FYSKSGDFGAAFNRLNEMYNRKVDTSFCTYSSILDGACKYNDGEVIGR--ILRMMVEKEL 317

Query: 113 LSKLVMSDYDSVIRKFSDMGKAYAAELFFREAYEKGI 3
           + +   S  D +I K  D+ K +AAE+ F++A ++ I
Sbjct: 318 VPRHQFSKKDLIIPKLCDLRKTHAAEMLFKKACDENI 354


>ref|NP_193849.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|332659015|gb|AEE84415.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 551

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 44/156 (28%), Positives = 80/156 (51%)
 Frame = -1

Query: 485 LLSKNELRLGWCYYGSIIGNGVQENVVTWSLIAQMLCKDGKFEQIVPILDKGVCSPVMYN 306
           L+ +N+ R+  C Y +++ NG+  + +TW LIAQ+LC+ G+ + +  +++ GV S  +Y 
Sbjct: 198 LVKENQFRVALCLYSAMVRNGIVSDELTWDLIAQILCEQGRSKSVFKLMETGVESCKIYT 257

Query: 305 LLIDCYSERGILKLHLII*MICIGNVLIPVLVLLAQFLMVLANITTPK*LNQ**VLSSMV 126
            L++CYS  G       +        L          L     +   + +++  VL  MV
Sbjct: 258 NLVECYSRNGEFDAVFSLIHEMDDKKLELSFCSYGCVLDDACRLGDAEFIDK--VLCLMV 315

Query: 125 EKGHLSKLVMSDYDSVIRKFSDMGKAYAAELFFREA 18
           EK  ++    +  D +I +  DMGK +A+E+ FR+A
Sbjct: 316 EKKFVTLGDSAVNDKIIERLCDMGKTFASEMLFRKA 351


>sp|O49558.2|PP331_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21170
          Length = 585

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 44/156 (28%), Positives = 80/156 (51%)
 Frame = -1

Query: 485 LLSKNELRLGWCYYGSIIGNGVQENVVTWSLIAQMLCKDGKFEQIVPILDKGVCSPVMYN 306
           L+ +N+ R+  C Y +++ NG+  + +TW LIAQ+LC+ G+ + +  +++ GV S  +Y 
Sbjct: 198 LVKENQFRVALCLYSAMVRNGIVSDELTWDLIAQILCEQGRSKSVFKLMETGVESCKIYT 257

Query: 305 LLIDCYSERGILKLHLII*MICIGNVLIPVLVLLAQFLMVLANITTPK*LNQ**VLSSMV 126
            L++CYS  G       +        L          L     +   + +++  VL  MV
Sbjct: 258 NLVECYSRNGEFDAVFSLIHEMDDKKLELSFCSYGCVLDDACRLGDAEFIDK--VLCLMV 315

Query: 125 EKGHLSKLVMSDYDSVIRKFSDMGKAYAAELFFREA 18
           EK  ++    +  D +I +  DMGK +A+E+ FR+A
Sbjct: 316 EKKFVTLGDSAVNDKIIERLCDMGKTFASEMLFRKA 351


>ref|XP_006285106.1| hypothetical protein CARUB_v10006439mg [Capsella rubella]
           gi|482553811|gb|EOA18004.1| hypothetical protein
           CARUB_v10006439mg [Capsella rubella]
          Length = 585

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 44/156 (28%), Positives = 79/156 (50%)
 Frame = -1

Query: 485 LLSKNELRLGWCYYGSIIGNGVQENVVTWSLIAQMLCKDGKFEQIVPILDKGVCSPVMYN 306
           L+ + + R+  C Y +++ N V  +  TW L+AQ+LC+ G+ + +V +++ GV S  +Y 
Sbjct: 198 LIKEGQFRVALCLYSAMVRNQVVSDGFTWDLVAQILCEQGRSKSVVKLMETGVESCKIYT 257

Query: 305 LLIDCYSERGILKLHLII*MICIGNVLIPVLVLLAQFLMVLANITTPK*LNQ**VLSSMV 126
            L++CYS  G       +        L       +  L  +  +   + + +  VL  MV
Sbjct: 258 NLVECYSRNGEFDAVFNVIHEMDNKKLELSFSSYSCVLDDVCRLGDAELMGK--VLGLMV 315

Query: 125 EKGHLSKLVMSDYDSVIRKFSDMGKAYAAELFFREA 18
           EK  L+    +  D +I +  DMGK +A+E+ FR+A
Sbjct: 316 EKKFLAVDASAVNDEIIERLCDMGKTFASEMLFRKA 351


>ref|XP_004293147.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Fragaria vesca subsp. vesca]
          Length = 729

 Score = 53.9 bits (128), Expect(2) = 3e-08
 Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
 Frame = -1

Query: 461 LGWCYYGSIIGNGVQENVVTWSLIAQMLCKDGKFEQIVPIL----DKGVCSPVM-YNLLI 297
           L W  YG ++  GVQ NV T +++   LCKDGK +++   +    +KGV + ++ YN LI
Sbjct: 220 LAWQVYGEVVSGGVQVNVYTLNIMVNALCKDGKIDKVKSFISDMAEKGVSADIVTYNTLI 279

Query: 296 DCYSERGILK 267
           + Y   G+++
Sbjct: 280 NAYCREGLVE 289



 Score = 29.3 bits (64), Expect(2) = 3e-08
 Identities = 14/49 (28%), Positives = 24/49 (48%)
 Frame = -3

Query: 270 EAAFDYLNDMYRKCIDPSFSTFSSILDGACKYHNAEVIESVMSSEFHGG 124
           E AF+  N M  K + P   T+++I++G C+  N    + V+      G
Sbjct: 289 EEAFELKNSMASKGLRPEVFTYNAIMNGLCRVGNYARAKEVLYEILQNG 337


>ref|XP_006338777.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Solanum tuberosum]
          Length = 730

 Score = 54.3 bits (129), Expect(2) = 7e-08
 Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
 Frame = -1

Query: 461 LGWCYYGSIIGNGVQENVVTWSLIAQMLCKDGKFEQIVPILD----KGVC-SPVMYNLLI 297
           L W  YG + G+ +Q NV T +++   LCKDGK E + P ++    KG+    V YN LI
Sbjct: 220 LAWEVYGEMTGSSIQPNVYTLNIMVNALCKDGKIESVNPFIEEMEKKGIFPDMVTYNTLI 279

Query: 296 DCYSERGILK 267
           + Y   G+L+
Sbjct: 280 NAYCHEGLLE 289



 Score = 27.7 bits (60), Expect(2) = 7e-08
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -3

Query: 270 EAAFDYLNDMYRKCIDPSFSTFSSILDGACK 178
           E A++ +N M    + P   T++SIL+G CK
Sbjct: 289 EEAYEVINIMKATGLRPCLLTYNSILNGLCK 319


>ref|XP_006287148.1| hypothetical protein CARUB_v10000318mg [Capsella rubella]
           gi|482555854|gb|EOA20046.1| hypothetical protein
           CARUB_v10000318mg [Capsella rubella]
          Length = 729

 Score = 49.7 bits (117), Expect(2) = 1e-07
 Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
 Frame = -1

Query: 467 LRLGWCYYGSIIGNGVQENVVTWSLIAQMLCKDGKFEQIVPIL----DKGVCSPVM-YNL 303
           + L W  Y  I  +GV  NV T +++   LCKDGK E+I   L    +KGV   ++ YN 
Sbjct: 216 VELAWGVYQEISRSGVGINVFTLNIMVNALCKDGKMEKIGTFLSQVKEKGVYPDIVTYNT 275

Query: 302 LIDCYSERGILK 267
           LI  YS +G+++
Sbjct: 276 LISAYSSKGLME 287



 Score = 31.6 bits (70), Expect(2) = 1e-07
 Identities = 14/49 (28%), Positives = 25/49 (51%)
 Frame = -3

Query: 270 EAAFDYLNDMYRKCIDPSFSTFSSILDGACKYHNAEVIESVMSSEFHGG 124
           E AF+ ++ M  K   P   TF+++++G CK+   E  + V +     G
Sbjct: 287 EEAFELMDAMPSKGFSPGVYTFNTVINGLCKHGRYERAKEVFAEMLRSG 335


>ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g01110 gi|6759434|emb|CAB69839.1| putative protein
           [Arabidopsis thaliana] gi|28973740|gb|AAO64186.1|
           unknown protein [Arabidopsis thaliana]
           gi|110736884|dbj|BAF00399.1| hypothetical protein
           [Arabidopsis thaliana] gi|332002917|gb|AED90300.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 729

 Score = 49.3 bits (116), Expect(2) = 1e-07
 Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
 Frame = -1

Query: 467 LRLGWCYYGSIIGNGVQENVVTWSLIAQMLCKDGKFEQIVPIL----DKGVCSPVM-YNL 303
           + L W  Y  I  +GV  NV T +++   LCKDGK E++   L    +KGV   ++ YN 
Sbjct: 216 VELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNT 275

Query: 302 LIDCYSERGILK 267
           LI  YS +G+++
Sbjct: 276 LISAYSSKGLME 287



 Score = 32.0 bits (71), Expect(2) = 1e-07
 Identities = 14/49 (28%), Positives = 25/49 (51%)
 Frame = -3

Query: 270 EAAFDYLNDMYRKCIDPSFSTFSSILDGACKYHNAEVIESVMSSEFHGG 124
           E AF+ +N M  K   P   T++++++G CK+   E  + V +     G
Sbjct: 287 EEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG 335


>ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297316778|gb|EFH47200.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 719

 Score = 49.3 bits (116), Expect(2) = 3e-07
 Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
 Frame = -1

Query: 467 LRLGWCYYGSIIGNGVQENVVTWSLIAQMLCKDGKFEQIVPIL----DKGVCSPVM-YNL 303
           + L W  Y  I  +GV  NV T +++   LCKDGK E++   L    +KGV   ++ YN 
Sbjct: 206 VELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNT 265

Query: 302 LIDCYSERGILK 267
           LI  YS +G+++
Sbjct: 266 LISAYSSQGLME 277



 Score = 30.4 bits (67), Expect(2) = 3e-07
 Identities = 13/49 (26%), Positives = 25/49 (51%)
 Frame = -3

Query: 270 EAAFDYLNDMYRKCIDPSFSTFSSILDGACKYHNAEVIESVMSSEFHGG 124
           E AF+ ++ M  K   P   T++++++G CK+   E  + V +     G
Sbjct: 277 EEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG 325


>ref|XP_002299984.2| hypothetical protein POPTR_0001s28320g [Populus trichocarpa]
           gi|550348376|gb|EEE84789.2| hypothetical protein
           POPTR_0001s28320g [Populus trichocarpa]
          Length = 519

 Score = 46.2 bits (108), Expect(2) = 7e-07
 Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
 Frame = -1

Query: 467 LRLGWCYYGSIIGNGVQENVVTWSLIAQMLCKDGKFEQIVPILDK----GV-CSPVMYNL 303
           + L W  +  ++ +G++ NV T +++   LCKDGKF+ +   L +    G+    V YN 
Sbjct: 99  VELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNT 158

Query: 302 LIDCYSERGILK 267
           LI  Y   G+L+
Sbjct: 159 LIGAYCREGLLE 170



 Score = 32.3 bits (72), Expect(2) = 7e-07
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = -3

Query: 270 EAAFDYLNDMYRKCIDPSFSTFSSILDGACK 178
           E AF+ +N M  K + PS  T+++I++G CK
Sbjct: 170 EEAFEIMNSMADKGLKPSLFTYNAIINGLCK 200


>ref|XP_004237581.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Solanum lycopersicum]
          Length = 738

 Score = 52.4 bits (124), Expect(2) = 1e-06
 Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
 Frame = -1

Query: 461 LGWCYYGSIIGNGVQENVVTWSLIAQMLCKDGKFEQIVPI---LDKGVCSP--VMYNLLI 297
           L W  YG + G+ +Q NV T +++   LCKDGK E + P    ++K    P  V YN LI
Sbjct: 229 LAWEVYGEMTGSSIQPNVYTLNIMVNALCKDGKIESVNPFIEEMEKKEIFPDMVTYNTLI 288

Query: 296 DCYSERGILK 267
           + Y   G+L+
Sbjct: 289 NAYCHEGLLE 298



 Score = 25.4 bits (54), Expect(2) = 1e-06
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -3

Query: 270 EAAFDYLNDMYRKCIDPSFSTFSSILDGACK 178
           E A + +N M    + P   T++SIL+G CK
Sbjct: 298 EEADEVINIMKATGLRPCLLTYNSILNGLCK 328