BLASTX nr result
ID: Atropa21_contig00037968
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00037968
(605 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein A... 112 5e-36
ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein A... 97 6e-31
ref|XP_006338863.1| PREDICTED: uncharacterized protein LOC102579... 86 1e-23
ref|XP_006354689.1| PREDICTED: uncharacterized protein LOC102605... 91 1e-22
ref|XP_006343440.1| PREDICTED: uncharacterized protein LOC102595... 54 2e-16
ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596... 55 2e-15
ref|XP_006355175.1| PREDICTED: putative ribonuclease H protein A... 67 2e-15
ref|XP_006363849.1| PREDICTED: uncharacterized protein LOC102601... 79 7e-13
ref|XP_006338209.1| PREDICTED: putative ribonuclease H protein A... 53 1e-08
ref|XP_004228797.1| PREDICTED: putative ribonuclease H protein A... 42 2e-08
ref|XP_004248595.1| PREDICTED: uncharacterized protein LOC101261... 47 5e-08
ref|XP_004237273.1| PREDICTED: putative ribonuclease H protein A... 44 1e-06
>ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 1035
Score = 112 bits (280), Expect(2) = 5e-36
Identities = 53/140 (37%), Positives = 77/140 (55%), Gaps = 1/140 (0%)
Frame = +3
Query: 6 LQLVIIKWWTMEASHKLKIIYAVVLTIILWEIWKRRNSIKHDVNITFSRI*F*VQRSLI* 185
LQ +I KWW +AS+KL I VL +I+WE+WKRRNS +H T++ + + Q L
Sbjct: 575 LQQLIFKWWDYKASNKLSQILKAVLAVIMWELWKRRNSYRHGKETTYNNMYYQCQLILYQ 634
Query: 186 LIKMQYTWETKIPSEWSEIISMFSQYKPMLHYFIVRWRLPG*EILKCNTDXXXXXXXXXX 365
L+ +++ W + W +++ M YKP LHY +VRWR P + CNTD
Sbjct: 635 LVTIKFPWIKGLTYHWPQVVGMLQNYKPPLHYKVVRWRKPSEGWVTCNTDGASKGNPRMS 694
Query: 366 XXXFCIRDE-GKI*YMHRHN 422
+CIRD+ G + Y HN
Sbjct: 695 SYGYCIRDKNGDLLYAEAHN 714
Score = 65.1 bits (157), Expect(2) = 5e-36
Identities = 32/68 (47%), Positives = 47/68 (69%)
Frame = +2
Query: 398 DMIYA*AQQLGITTNMIAETTTIQEAVK*CLDHNAHNVTLKTDSLILKNILYDV*KAPWK 577
D++YA A +G TTNM AE TT+ +A++ C ++ V L+TDSL L+N++ K PW+
Sbjct: 706 DLLYAEAHNIGETTNMEAEATTVWKALQFCYENGLRKVRLETDSLALQNMITRSWKIPWE 765
Query: 578 LVEYIEEI 601
LVE +EEI
Sbjct: 766 LVEKLEEI 773
>ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 885
Score = 96.7 bits (239), Expect(2) = 6e-31
Identities = 48/129 (37%), Positives = 70/129 (54%)
Frame = +3
Query: 6 LQLVIIKWWTMEASHKLKIIYAVVLTIILWEIWKRRNSIKHDVNITFSRI*F*VQRSLI* 185
LQ +II WW EA+ KL+ IY + II+W +WKRRN++KHD +I++ R+ V +
Sbjct: 604 LQQLIISWWKHEATPKLQGIYKAIPAIIMWTLWKRRNALKHDSSISWERMVEMVIEVVRK 663
Query: 186 LIKMQYTWETKIPSEWSEIISMFSQYKPMLHYFIVRWRLPG*EILKCNTDXXXXXXXXXX 365
++K Q+ W + W II +QYK +H V W+ P +K NTD
Sbjct: 664 MVKSQFPWIKNMRWTWQAIIQRLNQYKRKIHVLRVTWKPPDDHYVKSNTDGACRGNPGLS 723
Query: 366 XXXFCIRDE 392
FCIRD+
Sbjct: 724 SFGFCIRDD 732
Score = 63.9 bits (154), Expect(2) = 6e-31
Identities = 31/69 (44%), Positives = 44/69 (63%)
Frame = +2
Query: 398 DMIYA*AQQLGITTNMIAETTTIQEAVK*CLDHNAHNVTLKTDSLILKNILYDV*KAPWK 577
D+IYA A+ +GI TNM AET I A++ C + V ++TDSL LK I+ + PWK
Sbjct: 735 DLIYAKAKGIGIATNMEAETVAILTALRECSNRKMQKVIIETDSLSLKKIIQQTWRVPWK 794
Query: 578 LVEYIEEIK 604
+ E +EEI+
Sbjct: 795 IAEKVEEIR 803
>ref|XP_006338863.1| PREDICTED: uncharacterized protein LOC102579795 [Solanum tuberosum]
Length = 778
Score = 85.5 bits (210), Expect(2) = 1e-23
Identities = 42/129 (32%), Positives = 64/129 (49%)
Frame = +3
Query: 3 QLQLVIIKWWTMEASHKLKIIYAVVLTIILWEIWKRRNSIKHDVNITFSRI*F*VQRSLI 182
QL+ I KWW S KL+ ++ + ILWE WK RN++KH I+ + + R++
Sbjct: 34 QLKDTIFKWWNANCSAKLRPLFNAIPGFILWESWKGRNTVKHGGKISRYNMLAEITRNIH 93
Query: 183 *LIKMQYTWETKIPSEWSEIISMFSQYKPMLHYFIVRWRLPG*EILKCNTDXXXXXXXXX 362
L ++Y W IP +WS ++ F Y +L ++ W P + KCNTD
Sbjct: 94 NLAMVRYPWLRNIPKDWSMMVKFFENYISVLATKVIYWVPPNMGVYKCNTDCASKGNPRP 153
Query: 363 XXXXFCIRD 389
FCIR+
Sbjct: 154 SAGGFCIRN 162
Score = 50.4 bits (119), Expect(2) = 1e-23
Identities = 24/69 (34%), Positives = 41/69 (59%)
Frame = +2
Query: 398 DMIYA*AQQLGITTNMIAETTTIQEAVK*CLDHNAHNVTLKTDSLILKNILYDV*KAPWK 577
+ IY +Q+LG T++ AE + ++ C+ HN V L+TDSLI+ IL + + PW
Sbjct: 166 EFIYTTSQELGFKTSLEAEVIAFERGLQFCMSHNLLPVILETDSLIVSKILDGIWETPWS 225
Query: 578 LVEYIEEIK 604
+ I++I+
Sbjct: 226 ISLLIKKIQ 234
>ref|XP_006354689.1| PREDICTED: uncharacterized protein LOC102605437 [Solanum tuberosum]
Length = 333
Score = 90.5 bits (223), Expect(2) = 1e-22
Identities = 45/129 (34%), Positives = 72/129 (55%)
Frame = +3
Query: 3 QLQLVIIKWWTMEASHKLKIIYAVVLTIILWEIWKRRNSIKHDVNITFSRI*F*VQRSLI 182
QL V+IKWWT ++ LK + VV T+++W +WKRRN++KH +++ + + V L
Sbjct: 63 QLSQVVIKWWTSDSCPILKPLMRVVPTVVIWNLWKRRNNLKHGRPSSYNNLVYRVNSDLW 122
Query: 183 *LIKMQYTWETKIPSEWSEIISMFSQYKPMLHYFIVRWRLPG*EILKCNTDXXXXXXXXX 362
L + Y P++WS+I++ ++KP L+Y V W+ P IL CNTD
Sbjct: 123 KLGRTIYPKLQDFPTKWSDIVACLEKHKPKLYYLPVCWKPPE-GILTCNTDVASRCNPEI 181
Query: 363 XXXXFCIRD 389
FC+R+
Sbjct: 182 SSYGFCLRN 190
Score = 42.4 bits (98), Expect(2) = 1e-22
Identities = 21/68 (30%), Positives = 36/68 (52%)
Frame = +2
Query: 398 DMIYA*AQQLGITTNMIAETTTIQEAVK*CLDHNAHNVTLKTDSLILKNILYDV*KAPWK 577
D++Y +++ TN+ E I+E + C+ L+TDS +L IL + + PW
Sbjct: 194 DLVYVQGKEIQEGTNLEVEAVAIREDLAHCVTKGVMKACLETDSQVLIKILTRIWEVPWS 253
Query: 578 LVEYIEEI 601
+V IE+I
Sbjct: 254 IVVIIEDI 261
>ref|XP_006343440.1| PREDICTED: uncharacterized protein LOC102595406 [Solanum tuberosum]
Length = 866
Score = 53.5 bits (127), Expect(3) = 2e-16
Identities = 27/67 (40%), Positives = 42/67 (62%)
Frame = +2
Query: 398 DMIYA*AQQLGITTNMIAETTTIQEAVK*CLDHNAHNVTLKTDSLILKNILYDV*KAPWK 577
++IYA A+++ TTN+ AE I+EA+ C VT++TDSL+LKNIL + PW
Sbjct: 769 NLIYAQAEEIPETTNVEAEAVAIKEAIYHCTTRGFSRVTIETDSLLLKNILQGNWEIPWN 828
Query: 578 LVEYIEE 598
+ +E+
Sbjct: 829 IRIIVED 835
Score = 48.5 bits (114), Expect(3) = 2e-16
Identities = 23/92 (25%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Frame = +3
Query: 135 NITFSRI*F*VQRSLI*LIKMQYTWETKIPSEWSEIISMFSQYKPMLHYFIVRWRLPG*E 314
N+T++++ + V ++ + + + P+ WS+++ YKP ++Y + W P
Sbjct: 681 NMTYNKLVYQVTLNVWQFARSSFPSMKQFPTNWSDMVKFLENYKPRIYYKKIIWMPPNSN 740
Query: 315 ILKCNTDXXXXXXXXXXXXXFCIRD-EGKI*Y 407
KCNTD +C+RD EG + Y
Sbjct: 741 TRKCNTDGASKGNPGKSSYAYCLRDQEGNLIY 772
Score = 29.6 bits (65), Expect(3) = 2e-16
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 20 NQMVDNGGITQAQNNICSSSNNNLMGDMEEKKLYQ 124
N MVD+ G +Q N + + N +G+ME+KK +Q
Sbjct: 643 NNMVDSTGRSQTPTNYENYACNYTLGNMEKKKYHQ 677
>ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596481 [Solanum tuberosum]
Length = 1135
Score = 55.1 bits (131), Expect(2) = 2e-15
Identities = 29/65 (44%), Positives = 42/65 (64%)
Frame = +2
Query: 398 DMIYA*AQQLGITTNMIAETTTIQEAVK*CLDHNAHNVTLKTDSLILKNILYDV*KAPWK 577
D+IYA A+ +GI TNM AE + EAV C + + ++TDSL+LK ++ + K PW+
Sbjct: 1071 DLIYARAKGIGIATNMEAEALALLEAVWYCQEKDLKEPIIETDSLVLKKMVDNQWKIPWE 1130
Query: 578 LVEYI 592
LVE I
Sbjct: 1131 LVERI 1135
Score = 53.5 bits (127), Expect(2) = 2e-15
Identities = 35/129 (27%), Positives = 49/129 (37%)
Frame = +3
Query: 6 LQLVIIKWWTMEASHKLKIIYAVVLTIILWEIWKRRNSIKHDVNITFSRI*F*VQRSLI* 185
LQ +II WW + KLK++ + TII+W +WKRRN+ KH T+S
Sbjct: 981 LQQLIINWWKHSDNAKLKVVMRAMPTIIMWTLWKRRNNFKHRGTTTYS------------ 1028
Query: 186 LIKMQYTWETKIPSEWSEIISMFSQYKPMLHYFIVRWRLPG*EILKCNTDXXXXXXXXXX 365
E++ + KP G +KCNTD
Sbjct: 1029 -----------------EVVMQVQEEKP------------GRNKVKCNTDGAARGNSGAS 1059
Query: 366 XXXFCIRDE 392
F +RDE
Sbjct: 1060 STSFVVRDE 1068
>ref|XP_006355175.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 143
Score = 67.0 bits (162), Expect(2) = 2e-15
Identities = 33/68 (48%), Positives = 47/68 (69%)
Frame = +2
Query: 398 DMIYA*AQQLGITTNMIAETTTIQEAVK*CLDHNAHNVTLKTDSLILKNILYDV*KAPWK 577
+++YA Q +G+TTNM AE+ I +A++ CL V+L+TDSL LKNIL K PW+
Sbjct: 54 ELLYAEVQSIGVTTNMDAESMAIWKALQYCLSQGFQQVSLETDSLTLKNILVRNWKTPWE 113
Query: 578 LVEYIEEI 601
LVE +E+I
Sbjct: 114 LVERVEDI 121
Score = 41.2 bits (95), Expect(2) = 2e-15
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +3
Query: 240 IISMFSQYKPMLHYFIVRWRLPG*EILKCNTDXXXXXXXXXXXXXFCIRD 389
++++ YKP L+Y +V W+ P +KCNTD FCIR+
Sbjct: 1 MVALLQSYKPTLYYHVVNWKPPEIGWIKCNTDGASKGNPDQSSYGFCIRN 50
>ref|XP_006363849.1| PREDICTED: uncharacterized protein LOC102601576 [Solanum tuberosum]
Length = 281
Score = 79.3 bits (194), Expect = 7e-13
Identities = 35/93 (37%), Positives = 54/93 (58%)
Frame = +3
Query: 30 WTMEASHKLKIIYAVVLTIILWEIWKRRNSIKHDVNITFSRI*F*VQRSLI*LIKMQYTW 209
W + KLK++ + TII+W +WKRRN+ KH T+S + VQ + LIK++Y W
Sbjct: 169 WKHSDNAKLKMVMRAMPTIIMWTLWKRRNNFKHGGTTTYSEMVMQVQEEVRKLIKLKYPW 228
Query: 210 ETKIPSEWSEIISMFSQYKPMLHYFIVRWRLPG 308
W +II+ +YKP +H+ V+W+ PG
Sbjct: 229 IHIRKETWPQIITKLKEYKPKIHHHYVQWKKPG 261
>ref|XP_006338209.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 198
Score = 53.1 bits (126), Expect(2) = 1e-08
Identities = 24/69 (34%), Positives = 43/69 (62%)
Frame = +2
Query: 398 DMIYA*AQQLGITTNMIAETTTIQEAVK*CLDHNAHNVTLKTDSLILKNILYDV*KAPWK 577
D+I+ A+ +GITTN+ AE I EA++ C++ + L++DSL++ I+ + K W
Sbjct: 54 DLIHVTAENIGITTNVEAEMRAILEAIRYCVNKKMRKIILESDSLLMVKIINEAWKVLWV 113
Query: 578 LVEYIEEIK 604
+ E +E+K
Sbjct: 114 IAEEFDELK 122
Score = 32.0 bits (71), Expect(2) = 1e-08
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +3
Query: 264 KPMLHYFIVRWRLPG*EILKCNTDXXXXXXXXXXXXXFCIRD 389
K L++ VRW P +++KCNTD +C+R+
Sbjct: 9 KSRLYHCTVRWDAPHEDVIKCNTDGASKGNPGISAYGYCLRN 50
>ref|XP_004228797.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 389
Score = 42.4 bits (98), Expect(2) = 2e-08
Identities = 34/140 (24%), Positives = 64/140 (45%), Gaps = 6/140 (4%)
Frame = +3
Query: 6 LQLVIIKWWTMEASHKL-KIIYAVVLTIILWEIWKRRNSIKH-DVNITFSRI*F*VQRSL 179
L+ ++ W + + +++ K+I ++ II W +WK R S K+ + + R+ + + +
Sbjct: 115 LRSTLLSWRRLTSYNEVHKLILHILPNIICWNLWKNRCSAKYGNKPSSIYRVESGIFKDI 174
Query: 180 I*LIKMQY---TWETKIPSEWSEIISMFSQYKPMLHYFIVRWRLPG*EILKCNTDXXXXX 350
+ +IK Y W+ S W + ++ Q + L +V W P I K NTD
Sbjct: 175 MQIIKAVYPNIPWQ----SSWERLFNLVEQCQQHLKVTMVNWERPPEGIHKLNTDGSAKH 230
Query: 351 XXXXXXXXFCIRD-EGKI*Y 407
+RD +GK+ Y
Sbjct: 231 NTGKIGGGGILRDHQGKLIY 250
Score = 42.0 bits (97), Expect(2) = 2e-08
Identities = 21/68 (30%), Positives = 34/68 (50%)
Frame = +2
Query: 401 MIYA*AQQLGITTNMIAETTTIQEAVK*CLDHNAHNVTLKTDSLILKNILYDV*KAPWKL 580
+IYA A LG TN AE ++ C H + L+ DS +L + + PW+
Sbjct: 248 LIYAFAIPLGFGTNNFAEIQAALHGLQWCQQHGFEKIILEVDSELLHKWIINKSSVPWRC 307
Query: 581 VEYIEEIK 604
+ YI++I+
Sbjct: 308 LHYIQQIQ 315
>ref|XP_004248595.1| PREDICTED: uncharacterized protein LOC101261371 [Solanum
lycopersicum]
Length = 1246
Score = 47.0 bits (110), Expect(2) = 5e-08
Identities = 31/135 (22%), Positives = 67/135 (49%), Gaps = 5/135 (3%)
Frame = +3
Query: 18 IIKWWTMEASHKL-KIIYAVVLTIILWEIWKRRNSIKH-DVNITFSRI*F*VQRSLI*LI 191
++ W + ++++ K++ ++ +I W +WK R ++K+ + + + R+ + + + ++ +I
Sbjct: 991 LLHWRNQQVNNEVHKLLIHILPNVICWNLWKNRCAVKYGNKSSSIHRVQYGIFKDVMQVI 1050
Query: 192 KMQYTWETKIP--SEWSEIISMFSQYKPMLHYFIVRWRLPG*EILKCNTDXXXXXXXXXX 365
K+ + IP S W+++I++ K +V W PG K NTD
Sbjct: 1051 KIVFP---SIPWQSSWNKLINIVEHCKQQYKIVLVSWNKPGLGTYKLNTDGSALQNSGKI 1107
Query: 366 XXXFCIRD-EGKI*Y 407
+RD +GKI Y
Sbjct: 1108 GGGGILRDHQGKIVY 1122
Score = 36.2 bits (82), Expect(2) = 5e-08
Identities = 21/68 (30%), Positives = 33/68 (48%)
Frame = +2
Query: 401 MIYA*AQQLGITTNMIAETTTIQEAVK*CLDHNAHNVTLKTDSLILKNILYDV*KAPWKL 580
++YA + G TN IAE ++ C H V L+ DS +L N + + PW
Sbjct: 1120 IVYAFSLPFGFGTNNIAEIKAALYGLEWCDQHGYKRVELEVDSQLLCNWIKNKTNIPWIY 1179
Query: 581 VEYIEEIK 604
+ I++IK
Sbjct: 1180 EDLIQQIK 1187
>ref|XP_004237273.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 601
Score = 43.5 bits (101), Expect(2) = 1e-06
Identities = 26/110 (23%), Positives = 58/110 (52%), Gaps = 4/110 (3%)
Frame = +3
Query: 18 IIKWWTMEASHKL-KIIYAVVLTIILWEIWKRRNSIKHD-VNITFSRI*F*VQRSLI*LI 191
++ W +++ ++++ K++ + II W +W+ R ++K+ + R+ + + + + +I
Sbjct: 331 LLYWRSLQTNNEVHKLLIHTLPNIICWNLWENRCAVKYGGKQSSIYRVQYGIFKDTMQII 390
Query: 192 KMQYTWETKIPSE--WSEIISMFSQYKPMLHYFIVRWRLPG*EILKCNTD 335
K++Y+ IP + W +I+ Q + F+VRW P K NTD
Sbjct: 391 KLEYS---NIPWQYSWGHLINFIDQCQQQYKIFMVRWIKPTIGRYKLNTD 437
Score = 35.0 bits (79), Expect(2) = 1e-06
Identities = 17/67 (25%), Positives = 33/67 (49%)
Frame = +2
Query: 401 MIYA*AQQLGITTNMIAETTTIQEAVK*CLDHNAHNVTLKTDSLILKNILYDV*KAPWKL 580
+I+A A TN IA+ ++ C H ++ L+ DS +L + + + PW+
Sbjct: 460 IIFAFASPFAFGTNNIAKLKAALYGLEWCEQHGYKDIVLEIDSELLSKWISNTIQIPWRC 519
Query: 581 VEYIEEI 601
+Y++ I
Sbjct: 520 QQYVQHI 526