BLASTX nr result
ID: Atropa21_contig00037916
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00037916
(1288 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006362709.1| PREDICTED: putative ribonuclease H protein A... 73 2e-10
ref|XP_006347119.1| PREDICTED: putative ribonuclease H protein A... 70 2e-09
ref|XP_006337991.1| PREDICTED: putative ribonuclease H protein A... 70 2e-09
ref|XP_006355601.1| PREDICTED: putative ribonuclease H protein A... 69 4e-09
ref|XP_006352964.1| PREDICTED: putative ribonuclease H protein A... 69 4e-09
ref|XP_006350483.1| PREDICTED: putative ribonuclease H protein A... 67 2e-08
ref|XP_006354966.1| PREDICTED: putative ribonuclease H protein A... 66 4e-08
ref|XP_006352585.1| PREDICTED: uncharacterized protein LOC102588... 64 1e-07
ref|XP_006345709.1| PREDICTED: putative ribonuclease H protein A... 61 9e-07
ref|XP_006353602.1| PREDICTED: putative ribonuclease H protein A... 61 1e-06
emb|CAN75374.1| hypothetical protein VITISV_029152 [Vitis vinifera] 47 2e-06
ref|XP_006356729.1| PREDICTED: putative ribonuclease H protein A... 60 3e-06
ref|XP_006345710.1| PREDICTED: putative ribonuclease H protein A... 59 3e-06
emb|CAN78577.1| hypothetical protein VITISV_020585 [Vitis vinifera] 59 6e-06
>ref|XP_006362709.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 217
Score = 73.2 bits (178), Expect = 2e-10
Identities = 39/104 (37%), Positives = 56/104 (53%)
Frame = -2
Query: 660 KAETISHLFLHCPVTVLLTILLIRFGSYFGTFWALNGPCLVIQLIF*RCSSIGTNMSWKI 481
+ ET++HLFLHC T L + I+ W G + + + R + G N K
Sbjct: 102 QVETVNHLFLHCKWTDQLWQMFIQKRKIK---WTKPGSIIEVLQCWNRDGNAGKNE--KR 156
Query: 480 WNKIPACI*WIVWRERKKRSSEDSYNSMLKIKANCICLYYYSCK 349
W +PACI W +W+ER +R E N++ KIK NC+ LYY+ CK
Sbjct: 157 WRIVPACIWWTIWKERNQRCFEGKQNNIQKIKTNCLGLYYFWCK 200
Score = 67.8 bits (164), Expect = 9e-09
Identities = 35/89 (39%), Positives = 49/89 (55%)
Frame = -1
Query: 787 WKSKAPCKVSYFTWLVAKEAALSHDNLRKRWLLLCSRCHLWNKGRNHKXXXXXXXXXXXX 608
W+++ P KV+YFTWL+AK+A L+H+NL KR L S C+L +
Sbjct: 59 WRTEIPYKVNYFTWLLAKQAVLTHENLNKRKPNLRSSCYLCEE------QVETVNHLFLH 112
Query: 607 XXLTDQIWQLFWNFLGIKWTMPGNTADFL 521
TDQ+WQ+F IKWT PG+ + L
Sbjct: 113 CKWTDQLWQMFIQKRKIKWTKPGSIIEVL 141
>ref|XP_006347119.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 450
Score = 69.7 bits (169), Expect = 2e-09
Identities = 36/89 (40%), Positives = 47/89 (52%)
Frame = -1
Query: 787 WKSKAPCKVSYFTWLVAKEAALSHDNLRKRWLLLCSRCHLWNKGRNHKXXXXXXXXXXXX 608
WK + P KVS F WL+AKEAAL+ DN+ KR + LCSRC L +
Sbjct: 292 WKCRIPHKVSCFIWLLAKEAALTQDNVMKRGITLCSRCFLCGE------TLETVNHLFLH 345
Query: 607 XXLTDQIWQLFWNFLGIKWTMPGNTADFL 521
T Q+W++F + GI WTMP + L
Sbjct: 346 CKYTRQLWRIFLSLKGISWTMPRRVTEAL 374
>ref|XP_006337991.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 556
Score = 69.7 bits (169), Expect = 2e-09
Identities = 36/89 (40%), Positives = 47/89 (52%)
Frame = -1
Query: 787 WKSKAPCKVSYFTWLVAKEAALSHDNLRKRWLLLCSRCHLWNKGRNHKXXXXXXXXXXXX 608
WK + P KVS F WL+AKEAAL+ DN+ KR + LCSRC L +
Sbjct: 398 WKCRIPHKVSCFIWLLAKEAALTQDNVMKRGITLCSRCFLCGE------TLETVNHLFLH 451
Query: 607 XXLTDQIWQLFWNFLGIKWTMPGNTADFL 521
T Q+W++F + GI WTMP + L
Sbjct: 452 CKYTRQLWRIFLSLKGISWTMPRRVTEAL 480
>ref|XP_006355601.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 399
Score = 68.9 bits (167), Expect = 4e-09
Identities = 37/92 (40%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Frame = -1
Query: 787 WKSKAPCKVSYFTWLVAKEAALSHDNLRKRWLLLCSRCHLWNKGR---NHKXXXXXXXXX 617
WK + P KVS F WL+AKEAAL+ DN+ KR + LCSRC L + NH
Sbjct: 241 WKGRIPYKVSCFIWLLAKEAALTQDNVMKRGITLCSRCFLCGETSETVNH---------L 291
Query: 616 XXXXXLTDQIWQLFWNFLGIKWTMPGNTADFL 521
T Q+W++F + GI W MP + L
Sbjct: 292 FLHCKFTQQLWRVFLSLKGISWAMPRRITEAL 323
Score = 58.5 bits (140), Expect = 6e-06
Identities = 36/105 (34%), Positives = 49/105 (46%)
Frame = -2
Query: 666 GTKAETISHLFLHCPVTVLLTILLIRFGSYFGTFWALNGPCLVIQLIF*RCSSIGTNMSW 487
G +ET++HLFLHC T L + + S G WA+ + + + +
Sbjct: 282 GETSETVNHLFLHCKFTQQLWRVFL---SLKGISWAMPRRITEALKSWEEAGVLAKDRTR 338
Query: 486 KIWNKIPACI*WIVWRERKKRSSEDSYNSMLKIKANCICLYYYSC 352
W IPA I W W+ER R E NSM K+K NCI L + C
Sbjct: 339 --WRIIPASIWWATWKERNSRCFESVENSMQKVKLNCILLLCFWC 381
>ref|XP_006352964.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 323
Score = 68.9 bits (167), Expect = 4e-09
Identities = 37/92 (40%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Frame = -1
Query: 787 WKSKAPCKVSYFTWLVAKEAALSHDNLRKRWLLLCSRCHLWNKGR---NHKXXXXXXXXX 617
WK + P KVS F WL+AKEAAL+ DN+ KR + LCSRC L + NH
Sbjct: 165 WKGRIPYKVSCFIWLLAKEAALTQDNVMKRGITLCSRCFLCGETSETVNH---------L 215
Query: 616 XXXXXLTDQIWQLFWNFLGIKWTMPGNTADFL 521
T Q+W++F + GI W MP + L
Sbjct: 216 FLHCKFTQQLWRVFLSLKGISWAMPRRITEAL 247
Score = 58.5 bits (140), Expect = 6e-06
Identities = 36/105 (34%), Positives = 49/105 (46%)
Frame = -2
Query: 666 GTKAETISHLFLHCPVTVLLTILLIRFGSYFGTFWALNGPCLVIQLIF*RCSSIGTNMSW 487
G +ET++HLFLHC T L + + S G WA+ + + + +
Sbjct: 206 GETSETVNHLFLHCKFTQQLWRVFL---SLKGISWAMPRRITEALKSWEEAGVLAKDRTR 262
Query: 486 KIWNKIPACI*WIVWRERKKRSSEDSYNSMLKIKANCICLYYYSC 352
W IPA I W W+ER R E NSM K+K NCI L + C
Sbjct: 263 --WRIIPASIWWATWKERNSRCFESVENSMQKVKLNCILLLCFWC 305
>ref|XP_006350483.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 258
Score = 67.0 bits (162), Expect = 2e-08
Identities = 35/89 (39%), Positives = 44/89 (49%)
Frame = -1
Query: 787 WKSKAPCKVSYFTWLVAKEAALSHDNLRKRWLLLCSRCHLWNKGRNHKXXXXXXXXXXXX 608
WK K P KV FTWLV KEA L+ +NL KR + +C RC +
Sbjct: 176 WKVKIPYKVVVFTWLVVKEAVLTQENLMKRGIQMCPRCCFCEQ------VAETINHLFLH 229
Query: 607 XXLTDQIWQLFWNFLGIKWTMPGNTADFL 521
+ Q+W LF +F GI WT+PG D L
Sbjct: 230 CKVVGQLWNLFTSFRGISWTVPGENRDRL 258
>ref|XP_006354966.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 397
Score = 65.9 bits (159), Expect = 4e-08
Identities = 34/89 (38%), Positives = 44/89 (49%)
Frame = -1
Query: 787 WKSKAPCKVSYFTWLVAKEAALSHDNLRKRWLLLCSRCHLWNKGRNHKXXXXXXXXXXXX 608
WK K P KV FTWLV KEA L+ +NL KR + +C RC +
Sbjct: 239 WKVKIPYKVVVFTWLVVKEAVLTQENLMKRGIQMCPRCCFCEQ------VAETINHLFLH 292
Query: 607 XXLTDQIWQLFWNFLGIKWTMPGNTADFL 521
+ ++W LF +F GI WT+PG T L
Sbjct: 293 CKVVGKLWNLFTSFRGISWTVPGRTGQAL 321
Score = 61.2 bits (147), Expect = 9e-07
Identities = 40/103 (38%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
Frame = -2
Query: 657 AETISHLFLHCPVTVLLTILLIRFGSYFGTFWALNGPCLVIQLIF*RCSSIGTNMS-WKI 481
AETI+HLFLHC V L L F S+ G W + G + S T+ S WKI
Sbjct: 283 AETINHLFLHCKVVGKLWNL---FTSFRGISWTVPGRTGQALESWNMEGSGSTDKSRWKI 339
Query: 480 WNKIPACI*WIVWRERKKRSSEDSYNSMLKIKANCICLYYYSC 352
+PA I W +W+ER R+ ++ + + KIK NCI + Y C
Sbjct: 340 ---VPAVIWWTIWKERNSRNFDNKSSPLHKIKMNCIITFCYWC 379
>ref|XP_006352585.1| PREDICTED: uncharacterized protein LOC102588593 [Solanum tuberosum]
Length = 255
Score = 63.9 bits (154), Expect = 1e-07
Identities = 39/108 (36%), Positives = 54/108 (50%), Gaps = 2/108 (1%)
Frame = -2
Query: 666 GTKAETISHLFLHCPVTVLLTILLIRFGSYFGTFWALNGPCLVIQLIF*RCSSIGTNMSW 487
G +AE SHLFLHC L + + G W + P ++L+ + +G
Sbjct: 137 GEEAEVNSHLFLHCRTAANLWNMFL---CILGVNWVM--PKTTLELLR-QWEGVGRRRRS 190
Query: 486 KI--WNKIPACI*WIVWRERKKRSSEDSYNSMLKIKANCICLYYYSCK 349
K W IPACI W +W+ER +RS + NS KIK N + L Y+ CK
Sbjct: 191 KEDWWKCIPACIWWTLWKERNERSHDGKLNSTQKIKMNSLSLLYFWCK 238
Score = 58.5 bits (140), Expect = 6e-06
Identities = 28/89 (31%), Positives = 43/89 (48%)
Frame = -1
Query: 787 WKSKAPCKVSYFTWLVAKEAALSHDNLRKRWLLLCSRCHLWNKGRNHKXXXXXXXXXXXX 608
WK K P KVS FTWL ++A L+H+ +++R + +CSRC + +
Sbjct: 96 WKIKIPHKVSGFTWLAIRKACLTHEVIQRRGIQICSRCFMCGE------EAEVNSHLFLH 149
Query: 607 XXLTDQIWQLFWNFLGIKWTMPGNTADFL 521
+W +F LG+ W MP T + L
Sbjct: 150 CRTAANLWNMFLCILGVNWVMPKTTLELL 178
>ref|XP_006345709.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
X1 [Solanum tuberosum]
Length = 284
Score = 61.2 bits (147), Expect = 9e-07
Identities = 35/103 (33%), Positives = 50/103 (48%)
Frame = -2
Query: 657 AETISHLFLHCPVTVLLTILLIRFGSYFGTFWALNGPCLVIQLIF*RCSSIGTNMSWKIW 478
+ET SHLFLHC T + L + + W + + + R S + W W
Sbjct: 170 SETNSHLFLHCNYTAQIWNLFLNISNLN---WTMPERTSNVLKSWVRRGSTKSQKRW--W 224
Query: 477 NKIPACI*WIVWRERKKRSSEDSYNSMLKIKANCICLYYYSCK 349
IP+CI W VW+ER R ++ NS+ K+K NCI + CK
Sbjct: 225 RLIPSCIWWSVWKERNSRCFDNRSNSIHKVKWNCIVSLLFLCK 267
Score = 58.2 bits (139), Expect = 7e-06
Identities = 33/89 (37%), Positives = 40/89 (44%)
Frame = -1
Query: 787 WKSKAPCKVSYFTWLVAKEAALSHDNLRKRWLLLCSRCHLWNKGRNHKXXXXXXXXXXXX 608
WK P KV FTWLV K A L+ + L+K+ L RC L N
Sbjct: 126 WKGDIPTKVKCFTWLVIKRACLTQEVLQKKGRQLVPRCFLCN------LTSETNSHLFLH 179
Query: 607 XXLTDQIWQLFWNFLGIKWTMPGNTADFL 521
T QIW LF N + WTMP T++ L
Sbjct: 180 CNYTAQIWNLFLNISNLNWTMPERTSNVL 208
>ref|XP_006353602.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 517
Score = 60.8 bits (146), Expect = 1e-06
Identities = 36/103 (34%), Positives = 50/103 (48%)
Frame = -2
Query: 657 AETISHLFLHCPVTVLLTILLIRFGSYFGTFWALNGPCLVIQLIF*RCSSIGTNMSWKIW 478
+ET SHLFLHC T + L + S W + + + R S + W W
Sbjct: 403 SETNSHLFLHCNYTAQIWNLFL---SISNLNWTMPERTSNVLKSWVRRGSTKSQKRW--W 457
Query: 477 NKIPACI*WIVWRERKKRSSEDSYNSMLKIKANCICLYYYSCK 349
IP+CI W VW+ER R ++ NS+ K+K NCI + CK
Sbjct: 458 RLIPSCIWWSVWKERNNRCFDNRSNSIHKVKWNCIVSLLFWCK 500
>emb|CAN75374.1| hypothetical protein VITISV_029152 [Vitis vinifera]
Length = 655
Score = 47.4 bits (111), Expect(2) = 2e-06
Identities = 25/95 (26%), Positives = 45/95 (47%)
Frame = -2
Query: 654 ETISHLFLHCPVTVLLTILLIRFGSYFGTFWALNGPCLVIQLIF*RCSSIGTNMSWKIWN 475
ETI+H+ +HCP +L L+ + F W L V ++ S KIW
Sbjct: 539 ETINHILIHCPKAKVLWNLMF---TMFRVNWVLQ--LTVKDILLGWSDSFVDKKRGKIWR 593
Query: 474 KIPACI*WIVWRERKKRSSEDSYNSMLKIKANCIC 370
P C+ W +W+ R + + ++ S+ ++K + +C
Sbjct: 594 AAPLCLFWTMWKARNRIAFDNEALSIQRLKTSFVC 628
Score = 32.3 bits (72), Expect(2) = 2e-06
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -1
Query: 787 WKSKAPCKVSYFTWLVAKEAALSHDNLRKRWLLLCSRCHL 668
W P KV +F W + L+ D+L++R L ++C L
Sbjct: 494 WSPCVPTKVGFFAWEASWGKVLTQDHLKRRGWSLANKCFL 533
>ref|XP_006356729.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 330
Score = 59.7 bits (143), Expect = 3e-06
Identities = 33/80 (41%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Frame = -1
Query: 787 WKSKAPCKVSYFTWLVAKEAALSHDNLRKRWLLLCSRCHLWNKGR---NHKXXXXXXXXX 617
WK + P KVS F WL+AKEAAL+ DN+ KR + LCSRC L + NH
Sbjct: 259 WKGRIPYKVSCFIWLLAKEAALTQDNVMKRGITLCSRCFLCGETSETVNH---------L 309
Query: 616 XXXXXLTDQIWQLFWNFLGI 557
T Q+W++F + GI
Sbjct: 310 FLHCKFTQQLWRVFLSLKGI 329
>ref|XP_006345710.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
X2 [Solanum tuberosum]
Length = 284
Score = 59.3 bits (142), Expect = 3e-06
Identities = 35/103 (33%), Positives = 49/103 (47%)
Frame = -2
Query: 657 AETISHLFLHCPVTVLLTILLIRFGSYFGTFWALNGPCLVIQLIF*RCSSIGTNMSWKIW 478
+ET SHLFLHC T + L + + T P ++ GT + W
Sbjct: 170 SETNSHLFLHCNYTAQIWNLFLSISNLNWTM-----PERTSNVLKSWVRRGGTKSQKRWW 224
Query: 477 NKIPACI*WIVWRERKKRSSEDSYNSMLKIKANCICLYYYSCK 349
IP+CI W VW+ER R ++ NS+ K+K NCI + CK
Sbjct: 225 RLIPSCIWWSVWKERNSRCFDNRSNSIHKVKWNCIVSLLFWCK 267
>emb|CAN78577.1| hypothetical protein VITISV_020585 [Vitis vinifera]
Length = 1848
Score = 58.5 bits (140), Expect = 6e-06
Identities = 37/106 (34%), Positives = 55/106 (51%), Gaps = 1/106 (0%)
Frame = -2
Query: 660 KAETISHLFLHCPVTVLLTILLIRFGSYFGTFWALNGPCLVIQ-LIF*RCSSIGTNMSWK 484
K ETI HL LHC T +L LL S FG W + PC V + L+ + SS+G K
Sbjct: 1730 KEETIDHLLLHCSKTRVLWELLF---SLFGVSWVM--PCSVRETLLSWQTSSVGKKHR-K 1783
Query: 483 IWNKIPACI*WIVWRERKKRSSEDSYNSMLKIKANCICLYYYSCKI 346
+W P I W VW+ R + + +D S+ ++K + +C + K+
Sbjct: 1784 VWRAAPLHIFWTVWKARNRLAFKDDVISIQRLKYSFLCSLWSEAKL 1829