BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00037842
         (482 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004247885.1| PREDICTED: pentatricopeptide repeat-containi...   130   1e-28
ref|XP_006360926.1| PREDICTED: pentatricopeptide repeat-containi...   130   2e-28
ref|XP_002276778.1| PREDICTED: pentatricopeptide repeat-containi...   114   2e-23
ref|XP_002281924.1| PREDICTED: pentatricopeptide repeat-containi...   109   3e-22
gb|EXC10742.1| hypothetical protein L484_025326 [Morus notabilis]     108   6e-22
ref|XP_006424944.1| hypothetical protein CICLE_v10029104mg [Citr...   108   6e-22
gb|EOY33905.1| Pentatricopeptide repeat superfamily protein [The...   108   7e-22
ref|XP_002517255.1| conserved hypothetical protein [Ricinus comm...   108   7e-22
ref|XP_004145279.1| PREDICTED: pentatricopeptide repeat-containi...   108   1e-21
gb|EMJ06956.1| hypothetical protein PRUPE_ppa010266mg [Prunus pe...   107   1e-21
ref|XP_004507153.1| PREDICTED: pentatricopeptide repeat-containi...   103   2e-20
gb|ESW04024.1| hypothetical protein PHAVU_011G060800g [Phaseolus...   103   2e-20
ref|XP_002314145.2| pentatricopeptide repeat-containing family p...   102   5e-20
ref|XP_004291520.1| PREDICTED: pentatricopeptide repeat-containi...   102   7e-20
ref|XP_006404445.1| hypothetical protein EUTSA_v10010650mg [Eutr...   101   9e-20
gb|EPS64983.1| hypothetical protein M569_09798, partial [Genlise...   101   9e-20
ref|NP_190271.1| pentatricopeptide repeat-containing protein [Ar...   101   9e-20
ref|XP_006291711.1| hypothetical protein CARUB_v10017876mg [Caps...   100   2e-19
ref|XP_006858620.1| hypothetical protein AMTR_s00066p00023060 [A...   100   3e-19
ref|XP_006591821.1| PREDICTED: uncharacterized protein LOC100306...    99   6e-19

>ref|XP_004247885.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g46870-like [Solanum lycopersicum]
          Length = 256

 Score =  130 bits (328), Expect = 1e-28
 Identities = 73/112 (65%), Positives = 79/112 (70%), Gaps = 7/112 (6%)
 Frame = -2

Query: 316 MSIRSISRLNVPSYTSLFLLKHXXXXXXXXXXXNFTLR-------VPEFSRIPLWDVRFY 158
           M+IR+ISRL +PS     LLKH             T         VPEFSR  + DVR+Y
Sbjct: 1   MAIRTISRLKIPS----LLLKHLSVSPLPSISSTLTSSSSCSPSWVPEFSRSSVRDVRWY 56

Query: 157 HDGRPRGPLWRGKKLIGKEALFVILGLKRFKYDEEKLDKFVKTHVLRLLKMD 2
           HDGRPRG LWRGKKLIGKEALFVILGL+RFK DEEKLDKFVKTHVLRLLKMD
Sbjct: 57  HDGRPRGSLWRGKKLIGKEALFVILGLRRFKDDEEKLDKFVKTHVLRLLKMD 108


>ref|XP_006360926.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g46870-like [Solanum tuberosum]
          Length = 256

 Score =  130 bits (327), Expect = 2e-28
 Identities = 72/112 (64%), Positives = 79/112 (70%), Gaps = 7/112 (6%)
 Frame = -2

Query: 316 MSIRSISRLNVPSYTSLFLLKHXXXXXXXXXXXNFTLR-------VPEFSRIPLWDVRFY 158
           M+IR+ISRL +PS     LLKH             T         VPE SR  + DVR+Y
Sbjct: 1   MAIRAISRLKIPS----LLLKHLSVSPLPSVSSTLTSSSSCSTSWVPELSRSSVRDVRWY 56

Query: 157 HDGRPRGPLWRGKKLIGKEALFVILGLKRFKYDEEKLDKFVKTHVLRLLKMD 2
           HDGRPRGPLWRGKKLIGKEALFVILGL+RF+ DEEKLDKFVKTHVLRLLKMD
Sbjct: 57  HDGRPRGPLWRGKKLIGKEALFVILGLRRFRDDEEKLDKFVKTHVLRLLKMD 108


>ref|XP_002276778.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46870
           [Vitis vinifera] gi|297745785|emb|CBI15841.3| unnamed
           protein product [Vitis vinifera]
          Length = 252

 Score =  114 bits (284), Expect = 2e-23
 Identities = 60/105 (57%), Positives = 73/105 (69%)
 Frame = -2

Query: 316 MSIRSISRLNVPSYTSLFLLKHXXXXXXXXXXXNFTLRVPEFSRIPLWDVRFYHDGRPRG 137
           M+IR+ SR  +P +++  L               F + +   S  PL+ ++ YHDGRPRG
Sbjct: 1   MAIRAFSRSKIPIFSAKILQSLIKSPIKESTKFQFPV-LEVASNKPLFGLKHYHDGRPRG 59

Query: 136 PLWRGKKLIGKEALFVILGLKRFKYDEEKLDKFVKTHVLRLLKMD 2
           PLWRGKKLIGKEALFVILGLKRFK DEEKL KF+K+HVLRLLKMD
Sbjct: 60  PLWRGKKLIGKEALFVILGLKRFKDDEEKLRKFIKSHVLRLLKMD 104


>ref|XP_002281924.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46870
           isoform 1 [Vitis vinifera]
           gi|359478900|ref|XP_003632183.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g46870
           isoform 2 [Vitis vinifera] gi|297745987|emb|CBI16043.3|
           unnamed protein product [Vitis vinifera]
          Length = 252

 Score =  109 bits (273), Expect = 3e-22
 Identities = 60/106 (56%), Positives = 70/106 (66%), Gaps = 1/106 (0%)
 Frame = -2

Query: 316 MSIRSISRLNVPSYTSLFLLKHXXXXXXXXXXXNF-TLRVPEFSRIPLWDVRFYHDGRPR 140
           M+IR+ SR  +P +++  L               F  L V  +   PL   + YHDGRPR
Sbjct: 1   MAIRAFSRSKIPIFSAKILQNLIKAPIKESTRFQFPVLEVGSYK--PLLGSKLYHDGRPR 58

Query: 139 GPLWRGKKLIGKEALFVILGLKRFKYDEEKLDKFVKTHVLRLLKMD 2
           GPLWRGKKLIGKEALFVILGLKRFK DEE L KF+K+HVLRLLKMD
Sbjct: 59  GPLWRGKKLIGKEALFVILGLKRFKDDEENLRKFIKSHVLRLLKMD 104


>gb|EXC10742.1| hypothetical protein L484_025326 [Morus notabilis]
          Length = 324

 Score =  108 bits (271), Expect = 6e-22
 Identities = 52/60 (86%), Positives = 54/60 (90%)
 Frame = -2

Query: 181 PLWDVRFYHDGRPRGPLWRGKKLIGKEALFVILGLKRFKYDEEKLDKFVKTHVLRLLKMD 2
           P+   R YHDGRPRGPLWRGKKLIGKEALFVILGLKRFK DEEKL KF+KTHVLRLLKMD
Sbjct: 48  PVCGFREYHDGRPRGPLWRGKKLIGKEALFVILGLKRFKDDEEKLQKFIKTHVLRLLKMD 107


>ref|XP_006424944.1| hypothetical protein CICLE_v10029104mg [Citrus clementina]
           gi|568870438|ref|XP_006488411.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g46870-like isoform X1 [Citrus sinensis]
           gi|568870442|ref|XP_006488412.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g46870-like isoform X2 [Citrus sinensis]
           gi|557526878|gb|ESR38184.1| hypothetical protein
           CICLE_v10029104mg [Citrus clementina]
          Length = 256

 Score =  108 bits (271), Expect = 6e-22
 Identities = 60/108 (55%), Positives = 68/108 (62%), Gaps = 3/108 (2%)
 Frame = -2

Query: 316 MSIRSISRLNVPSYTSLFLLKHXXXXXXXXXXXNFTLRVPEFSRI---PLWDVRFYHDGR 146
           M+ R  SR  +P   S+ L               F  + P    +   P+  +R YHDGR
Sbjct: 1   MATRLFSRSKIPILASIVLQNLTKNPSKNFSFLAFKPKSPIVDFVAHEPILGLRQYHDGR 60

Query: 145 PRGPLWRGKKLIGKEALFVILGLKRFKYDEEKLDKFVKTHVLRLLKMD 2
           PRG LWRGKKLIGKEALFVILGLKRFK DEEKL KF+KTHVLRLLKMD
Sbjct: 61  PRGSLWRGKKLIGKEALFVILGLKRFKDDEEKLQKFIKTHVLRLLKMD 108


>gb|EOY33905.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
          Length = 287

 Score =  108 bits (270), Expect = 7e-22
 Identities = 59/108 (54%), Positives = 73/108 (67%), Gaps = 3/108 (2%)
 Frame = -2

Query: 316 MSIRSISRLNVPSYTSLFLLKHXXXXXXXXXXXNFTLRVPEF---SRIPLWDVRFYHDGR 146
           M+IR   +   P  TS+ LL++               R+P     S IP+  ++ YHDGR
Sbjct: 33  MAIRVFLKSKRPILTSI-LLQNLAKSPITRSPFPVNPRIPHVQSNSHIPISGLKQYHDGR 91

Query: 145 PRGPLWRGKKLIGKEALFVILGLKRFKYDEEKLDKFVKTHVLRLLKMD 2
           PRGPLW+GKKLIGKEALFVILGLKRFK D++KL KF+KTHVLRLLKM+
Sbjct: 92  PRGPLWKGKKLIGKEALFVILGLKRFKDDDDKLQKFIKTHVLRLLKME 139


>ref|XP_002517255.1| conserved hypothetical protein [Ricinus communis]
           gi|223543626|gb|EEF45155.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 258

 Score =  108 bits (270), Expect = 7e-22
 Identities = 51/56 (91%), Positives = 54/56 (96%)
 Frame = -2

Query: 169 VRFYHDGRPRGPLWRGKKLIGKEALFVILGLKRFKYDEEKLDKFVKTHVLRLLKMD 2
           +R YHDGRPRGPLWRGKKLIGKEALFVILGLKRFK +EEKLDKF+KTHVLRLLKMD
Sbjct: 55  LRQYHDGRPRGPLWRGKKLIGKEALFVILGLKRFKDEEEKLDKFIKTHVLRLLKMD 110


>ref|XP_004145279.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g46870-like [Cucumis sativus]
           gi|449475090|ref|XP_004154371.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g46870-like [Cucumis sativus]
           gi|449508514|ref|XP_004163333.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g46870-like [Cucumis sativus]
          Length = 255

 Score =  108 bits (269), Expect = 1e-21
 Identities = 58/108 (53%), Positives = 70/108 (64%), Gaps = 3/108 (2%)
 Frame = -2

Query: 316 MSIRSISRLNVPSYTSLFL---LKHXXXXXXXXXXXNFTLRVPEFSRIPLWDVRFYHDGR 146
           M+IR  SR  +P + S+FL    +              T   P+ SR P+W  R YHDGR
Sbjct: 1   MAIRWFSRSKLPVFASVFLQGLTRRPIRDVPLPVKSTITDFQPD-SRRPIWGFRLYHDGR 59

Query: 145 PRGPLWRGKKLIGKEALFVILGLKRFKYDEEKLDKFVKTHVLRLLKMD 2
           PRGPLWR +K IGKEALFVI GLKRFK DEEK +KF+K+HV RLLK+D
Sbjct: 60  PRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKFEKFMKSHVSRLLKLD 107


>gb|EMJ06956.1| hypothetical protein PRUPE_ppa010266mg [Prunus persica]
          Length = 256

 Score =  107 bits (268), Expect = 1e-21
 Identities = 60/108 (55%), Positives = 70/108 (64%), Gaps = 3/108 (2%)
 Frame = -2

Query: 316 MSIRSISRLNVPSYTSLFLLKHXXXXXXXXXXXNFTLRVPEF---SRIPLWDVRFYHDGR 146
           M+ R+ SR     ++S+ LL+                R+PE    S  P+   R YHDGR
Sbjct: 1   MATRAFSRSKFAIFSSI-LLRGLKRTTTQETPLLRKFRIPESEIESSKPICGFRLYHDGR 59

Query: 145 PRGPLWRGKKLIGKEALFVILGLKRFKYDEEKLDKFVKTHVLRLLKMD 2
           PRGPLWRGKKLIGKEAL+VI GLKRFK DEEKL KF+K HVLRLLKMD
Sbjct: 60  PRGPLWRGKKLIGKEALYVISGLKRFKDDEEKLGKFIKNHVLRLLKMD 107


>ref|XP_004507153.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g46870-like [Cicer arietinum]
          Length = 261

 Score =  103 bits (258), Expect = 2e-20
 Identities = 50/70 (71%), Positives = 55/70 (78%)
 Frame = -2

Query: 211 TLRVPEFSRIPLWDVRFYHDGRPRGPLWRGKKLIGKEALFVILGLKRFKYDEEKLDKFVK 32
           T  +  F    +W  R YHDGRPRGPLWRGKKLIGKEALFVI GLKRFK +E+ L KF+K
Sbjct: 44  THSIAMFEPKSVWGFREYHDGRPRGPLWRGKKLIGKEALFVISGLKRFKDEEDTLHKFIK 103

Query: 31  THVLRLLKMD 2
           THVLRLLKMD
Sbjct: 104 THVLRLLKMD 113


>gb|ESW04024.1| hypothetical protein PHAVU_011G060800g [Phaseolus vulgaris]
          Length = 254

 Score =  103 bits (257), Expect = 2e-20
 Identities = 57/98 (58%), Positives = 68/98 (69%), Gaps = 1/98 (1%)
 Frame = -2

Query: 292 LNVPSYT-SLFLLKHXXXXXXXXXXXNFTLRVPEFSRIPLWDVRFYHDGRPRGPLWRGKK 116
           L VP +T +  L+KH           +F  + P F     W  R YHDGRPRGPLW+GKK
Sbjct: 18  LLVPHFTRTTKLIKHASPPLSFLQSNSF--KTPSF-----W--RLYHDGRPRGPLWKGKK 68

Query: 115 LIGKEALFVILGLKRFKYDEEKLDKFVKTHVLRLLKMD 2
           LIGKEALFV+LGLKRFK D++KL KF+K+HVLRLLKMD
Sbjct: 69  LIGKEALFVVLGLKRFKDDQDKLQKFIKSHVLRLLKMD 106


>ref|XP_002314145.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550331008|gb|EEE88100.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 257

 Score =  102 bits (254), Expect = 5e-20
 Identities = 58/110 (52%), Positives = 74/110 (67%), Gaps = 5/110 (4%)
 Frame = -2

Query: 316 MSIRSISRLNVPSYTSLFLLKHXXXXXXXXXXXNFTLRVPEFSRIPLWDV----RFYHDG 149
           M  R++SR  +P+++S+ ++                L + + S I  + V    R YHDG
Sbjct: 1   MLTRALSRSKIPNFSSVIVILQNLTTKQSIIDQT-QLPLSKASNIQSFLVPAGLRQYHDG 59

Query: 148 RPRGPLWRGKKLIGKEALFVILGLKRFKY-DEEKLDKFVKTHVLRLLKMD 2
           RPRGPLWRGKKLIGKEALFVILGLKRFK  D+EKLD+F+KTHV RLLK+D
Sbjct: 60  RPRGPLWRGKKLIGKEALFVILGLKRFKNDDDEKLDRFIKTHVFRLLKLD 109


>ref|XP_004291520.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g46870-like [Fragaria vesca subsp. vesca]
          Length = 255

 Score =  102 bits (253), Expect = 7e-20
 Identities = 56/107 (52%), Positives = 69/107 (64%), Gaps = 2/107 (1%)
 Frame = -2

Query: 316 MSIRSISRLNVPSYTSLFL--LKHXXXXXXXXXXXNFTLRVPEFSRIPLWDVRFYHDGRP 143
           M++R+ SR    +++S+ L  LK              +      S  P+   R YHDGRP
Sbjct: 1   MAVRAFSRSKFSTFSSILLQGLKRTPIRENPFPPKPSSPVSQIQSCQPICGFRLYHDGRP 60

Query: 142 RGPLWRGKKLIGKEALFVILGLKRFKYDEEKLDKFVKTHVLRLLKMD 2
           RGPLWRGKKLIGKEAL+VI GLKRFK DEE L KF+K+HVLRLLK+D
Sbjct: 61  RGPLWRGKKLIGKEALYVISGLKRFKDDEETLGKFIKSHVLRLLKLD 107


>ref|XP_006404445.1| hypothetical protein EUTSA_v10010650mg [Eutrema salsugineum]
           gi|557105564|gb|ESQ45898.1| hypothetical protein
           EUTSA_v10010650mg [Eutrema salsugineum]
          Length = 257

 Score =  101 bits (252), Expect = 9e-20
 Identities = 46/53 (86%), Positives = 50/53 (94%)
 Frame = -2

Query: 160 YHDGRPRGPLWRGKKLIGKEALFVILGLKRFKYDEEKLDKFVKTHVLRLLKMD 2
           +HDGRPRGPLWRGKKLIGKEALFVILGLKR K D+EKLDKF+KTHV RLLK+D
Sbjct: 57  FHDGRPRGPLWRGKKLIGKEALFVILGLKRLKEDDEKLDKFIKTHVFRLLKLD 109


>gb|EPS64983.1| hypothetical protein M569_09798, partial [Genlisea aurea]
          Length = 203

 Score =  101 bits (252), Expect = 9e-20
 Identities = 47/55 (85%), Positives = 50/55 (90%)
 Frame = -2

Query: 166 RFYHDGRPRGPLWRGKKLIGKEALFVILGLKRFKYDEEKLDKFVKTHVLRLLKMD 2
           R YHDGRPRGPLWRGKKLIGKEALFV+ GLKRFK DEEK+D FV THVLRLLK+D
Sbjct: 1   RSYHDGRPRGPLWRGKKLIGKEALFVVQGLKRFKDDEEKMDTFVNTHVLRLLKLD 55


>ref|NP_190271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75266318|sp|Q9STF9.1|PP266_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g46870 gi|545719887|pdb|4LEU|A Chain A, Crystal
           Structure Of Tha8-like Protein From Arabidopsis Thaliana
           gi|5541672|emb|CAB51178.1| putative protein [Arabidopsis
           thaliana] gi|26450732|dbj|BAC42475.1| unknown protein
           [Arabidopsis thaliana] gi|28950815|gb|AAO63331.1|
           At3g46870 [Arabidopsis thaliana]
           gi|332644692|gb|AEE78213.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 257

 Score =  101 bits (252), Expect = 9e-20
 Identities = 46/53 (86%), Positives = 50/53 (94%)
 Frame = -2

Query: 160 YHDGRPRGPLWRGKKLIGKEALFVILGLKRFKYDEEKLDKFVKTHVLRLLKMD 2
           +HDGRPRGPLWRGKKLIGKEALFVILGLKR K D+EKLDKF+KTHV RLLK+D
Sbjct: 57  FHDGRPRGPLWRGKKLIGKEALFVILGLKRLKEDDEKLDKFIKTHVFRLLKLD 109


>ref|XP_006291711.1| hypothetical protein CARUB_v10017876mg [Capsella rubella]
           gi|565467664|ref|XP_006291712.1| hypothetical protein
           CARUB_v10017876mg [Capsella rubella]
           gi|482560418|gb|EOA24609.1| hypothetical protein
           CARUB_v10017876mg [Capsella rubella]
           gi|482560419|gb|EOA24610.1| hypothetical protein
           CARUB_v10017876mg [Capsella rubella]
          Length = 257

 Score =  100 bits (250), Expect = 2e-19
 Identities = 46/53 (86%), Positives = 50/53 (94%)
 Frame = -2

Query: 160 YHDGRPRGPLWRGKKLIGKEALFVILGLKRFKYDEEKLDKFVKTHVLRLLKMD 2
           +HDGRPRGPLWRGKKLIGKEALFVILGLKR K D+EKL KF+KTHVLRLLK+D
Sbjct: 57  FHDGRPRGPLWRGKKLIGKEALFVILGLKRLKEDDEKLQKFIKTHVLRLLKLD 109


>ref|XP_006858620.1| hypothetical protein AMTR_s00066p00023060 [Amborella trichopoda]
           gi|548862731|gb|ERN20087.1| hypothetical protein
           AMTR_s00066p00023060 [Amborella trichopoda]
          Length = 265

 Score =  100 bits (248), Expect = 3e-19
 Identities = 47/56 (83%), Positives = 51/56 (91%)
 Frame = -2

Query: 169 VRFYHDGRPRGPLWRGKKLIGKEALFVILGLKRFKYDEEKLDKFVKTHVLRLLKMD 2
           +R YHDGRPRGPLWRGKKLIGKEALF+I GLKRFK DE +LDKFVK+HV RLLKMD
Sbjct: 62  MRCYHDGRPRGPLWRGKKLIGKEALFIISGLKRFKDDEGQLDKFVKSHVSRLLKMD 117


>ref|XP_006591821.1| PREDICTED: uncharacterized protein LOC100306428 isoform X1 [Glycine
           max]
          Length = 255

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 46/55 (83%), Positives = 49/55 (89%)
 Frame = -2

Query: 166 RFYHDGRPRGPLWRGKKLIGKEALFVILGLKRFKYDEEKLDKFVKTHVLRLLKMD 2
           R YHDGRPRGPLW+GKKLIGKEALFVI G KRF  DE+KL KF+KTHVLRLLKMD
Sbjct: 53  RQYHDGRPRGPLWKGKKLIGKEALFVISGFKRFNDDEDKLHKFIKTHVLRLLKMD 107