BLASTX nr result
ID: Atropa21_contig00037842
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atropa21_contig00037842 (482 letters) Database: nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004247885.1| PREDICTED: pentatricopeptide repeat-containi... 130 1e-28 ref|XP_006360926.1| PREDICTED: pentatricopeptide repeat-containi... 130 2e-28 ref|XP_002276778.1| PREDICTED: pentatricopeptide repeat-containi... 114 2e-23 ref|XP_002281924.1| PREDICTED: pentatricopeptide repeat-containi... 109 3e-22 gb|EXC10742.1| hypothetical protein L484_025326 [Morus notabilis] 108 6e-22 ref|XP_006424944.1| hypothetical protein CICLE_v10029104mg [Citr... 108 6e-22 gb|EOY33905.1| Pentatricopeptide repeat superfamily protein [The... 108 7e-22 ref|XP_002517255.1| conserved hypothetical protein [Ricinus comm... 108 7e-22 ref|XP_004145279.1| PREDICTED: pentatricopeptide repeat-containi... 108 1e-21 gb|EMJ06956.1| hypothetical protein PRUPE_ppa010266mg [Prunus pe... 107 1e-21 ref|XP_004507153.1| PREDICTED: pentatricopeptide repeat-containi... 103 2e-20 gb|ESW04024.1| hypothetical protein PHAVU_011G060800g [Phaseolus... 103 2e-20 ref|XP_002314145.2| pentatricopeptide repeat-containing family p... 102 5e-20 ref|XP_004291520.1| PREDICTED: pentatricopeptide repeat-containi... 102 7e-20 ref|XP_006404445.1| hypothetical protein EUTSA_v10010650mg [Eutr... 101 9e-20 gb|EPS64983.1| hypothetical protein M569_09798, partial [Genlise... 101 9e-20 ref|NP_190271.1| pentatricopeptide repeat-containing protein [Ar... 101 9e-20 ref|XP_006291711.1| hypothetical protein CARUB_v10017876mg [Caps... 100 2e-19 ref|XP_006858620.1| hypothetical protein AMTR_s00066p00023060 [A... 100 3e-19 ref|XP_006591821.1| PREDICTED: uncharacterized protein LOC100306... 99 6e-19 >ref|XP_004247885.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46870-like [Solanum lycopersicum] Length = 256 Score = 130 bits (328), Expect = 1e-28 Identities = 73/112 (65%), Positives = 79/112 (70%), Gaps = 7/112 (6%) Frame = -2 Query: 316 MSIRSISRLNVPSYTSLFLLKHXXXXXXXXXXXNFTLR-------VPEFSRIPLWDVRFY 158 M+IR+ISRL +PS LLKH T VPEFSR + DVR+Y Sbjct: 1 MAIRTISRLKIPS----LLLKHLSVSPLPSISSTLTSSSSCSPSWVPEFSRSSVRDVRWY 56 Query: 157 HDGRPRGPLWRGKKLIGKEALFVILGLKRFKYDEEKLDKFVKTHVLRLLKMD 2 HDGRPRG LWRGKKLIGKEALFVILGL+RFK DEEKLDKFVKTHVLRLLKMD Sbjct: 57 HDGRPRGSLWRGKKLIGKEALFVILGLRRFKDDEEKLDKFVKTHVLRLLKMD 108 >ref|XP_006360926.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46870-like [Solanum tuberosum] Length = 256 Score = 130 bits (327), Expect = 2e-28 Identities = 72/112 (64%), Positives = 79/112 (70%), Gaps = 7/112 (6%) Frame = -2 Query: 316 MSIRSISRLNVPSYTSLFLLKHXXXXXXXXXXXNFTLR-------VPEFSRIPLWDVRFY 158 M+IR+ISRL +PS LLKH T VPE SR + DVR+Y Sbjct: 1 MAIRAISRLKIPS----LLLKHLSVSPLPSVSSTLTSSSSCSTSWVPELSRSSVRDVRWY 56 Query: 157 HDGRPRGPLWRGKKLIGKEALFVILGLKRFKYDEEKLDKFVKTHVLRLLKMD 2 HDGRPRGPLWRGKKLIGKEALFVILGL+RF+ DEEKLDKFVKTHVLRLLKMD Sbjct: 57 HDGRPRGPLWRGKKLIGKEALFVILGLRRFRDDEEKLDKFVKTHVLRLLKMD 108 >ref|XP_002276778.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46870 [Vitis vinifera] gi|297745785|emb|CBI15841.3| unnamed protein product [Vitis vinifera] Length = 252 Score = 114 bits (284), Expect = 2e-23 Identities = 60/105 (57%), Positives = 73/105 (69%) Frame = -2 Query: 316 MSIRSISRLNVPSYTSLFLLKHXXXXXXXXXXXNFTLRVPEFSRIPLWDVRFYHDGRPRG 137 M+IR+ SR +P +++ L F + + S PL+ ++ YHDGRPRG Sbjct: 1 MAIRAFSRSKIPIFSAKILQSLIKSPIKESTKFQFPV-LEVASNKPLFGLKHYHDGRPRG 59 Query: 136 PLWRGKKLIGKEALFVILGLKRFKYDEEKLDKFVKTHVLRLLKMD 2 PLWRGKKLIGKEALFVILGLKRFK DEEKL KF+K+HVLRLLKMD Sbjct: 60 PLWRGKKLIGKEALFVILGLKRFKDDEEKLRKFIKSHVLRLLKMD 104 >ref|XP_002281924.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46870 isoform 1 [Vitis vinifera] gi|359478900|ref|XP_003632183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46870 isoform 2 [Vitis vinifera] gi|297745987|emb|CBI16043.3| unnamed protein product [Vitis vinifera] Length = 252 Score = 109 bits (273), Expect = 3e-22 Identities = 60/106 (56%), Positives = 70/106 (66%), Gaps = 1/106 (0%) Frame = -2 Query: 316 MSIRSISRLNVPSYTSLFLLKHXXXXXXXXXXXNF-TLRVPEFSRIPLWDVRFYHDGRPR 140 M+IR+ SR +P +++ L F L V + PL + YHDGRPR Sbjct: 1 MAIRAFSRSKIPIFSAKILQNLIKAPIKESTRFQFPVLEVGSYK--PLLGSKLYHDGRPR 58 Query: 139 GPLWRGKKLIGKEALFVILGLKRFKYDEEKLDKFVKTHVLRLLKMD 2 GPLWRGKKLIGKEALFVILGLKRFK DEE L KF+K+HVLRLLKMD Sbjct: 59 GPLWRGKKLIGKEALFVILGLKRFKDDEENLRKFIKSHVLRLLKMD 104 >gb|EXC10742.1| hypothetical protein L484_025326 [Morus notabilis] Length = 324 Score = 108 bits (271), Expect = 6e-22 Identities = 52/60 (86%), Positives = 54/60 (90%) Frame = -2 Query: 181 PLWDVRFYHDGRPRGPLWRGKKLIGKEALFVILGLKRFKYDEEKLDKFVKTHVLRLLKMD 2 P+ R YHDGRPRGPLWRGKKLIGKEALFVILGLKRFK DEEKL KF+KTHVLRLLKMD Sbjct: 48 PVCGFREYHDGRPRGPLWRGKKLIGKEALFVILGLKRFKDDEEKLQKFIKTHVLRLLKMD 107 >ref|XP_006424944.1| hypothetical protein CICLE_v10029104mg [Citrus clementina] gi|568870438|ref|XP_006488411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46870-like isoform X1 [Citrus sinensis] gi|568870442|ref|XP_006488412.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46870-like isoform X2 [Citrus sinensis] gi|557526878|gb|ESR38184.1| hypothetical protein CICLE_v10029104mg [Citrus clementina] Length = 256 Score = 108 bits (271), Expect = 6e-22 Identities = 60/108 (55%), Positives = 68/108 (62%), Gaps = 3/108 (2%) Frame = -2 Query: 316 MSIRSISRLNVPSYTSLFLLKHXXXXXXXXXXXNFTLRVPEFSRI---PLWDVRFYHDGR 146 M+ R SR +P S+ L F + P + P+ +R YHDGR Sbjct: 1 MATRLFSRSKIPILASIVLQNLTKNPSKNFSFLAFKPKSPIVDFVAHEPILGLRQYHDGR 60 Query: 145 PRGPLWRGKKLIGKEALFVILGLKRFKYDEEKLDKFVKTHVLRLLKMD 2 PRG LWRGKKLIGKEALFVILGLKRFK DEEKL KF+KTHVLRLLKMD Sbjct: 61 PRGSLWRGKKLIGKEALFVILGLKRFKDDEEKLQKFIKTHVLRLLKMD 108 >gb|EOY33905.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao] Length = 287 Score = 108 bits (270), Expect = 7e-22 Identities = 59/108 (54%), Positives = 73/108 (67%), Gaps = 3/108 (2%) Frame = -2 Query: 316 MSIRSISRLNVPSYTSLFLLKHXXXXXXXXXXXNFTLRVPEF---SRIPLWDVRFYHDGR 146 M+IR + P TS+ LL++ R+P S IP+ ++ YHDGR Sbjct: 33 MAIRVFLKSKRPILTSI-LLQNLAKSPITRSPFPVNPRIPHVQSNSHIPISGLKQYHDGR 91 Query: 145 PRGPLWRGKKLIGKEALFVILGLKRFKYDEEKLDKFVKTHVLRLLKMD 2 PRGPLW+GKKLIGKEALFVILGLKRFK D++KL KF+KTHVLRLLKM+ Sbjct: 92 PRGPLWKGKKLIGKEALFVILGLKRFKDDDDKLQKFIKTHVLRLLKME 139 >ref|XP_002517255.1| conserved hypothetical protein [Ricinus communis] gi|223543626|gb|EEF45155.1| conserved hypothetical protein [Ricinus communis] Length = 258 Score = 108 bits (270), Expect = 7e-22 Identities = 51/56 (91%), Positives = 54/56 (96%) Frame = -2 Query: 169 VRFYHDGRPRGPLWRGKKLIGKEALFVILGLKRFKYDEEKLDKFVKTHVLRLLKMD 2 +R YHDGRPRGPLWRGKKLIGKEALFVILGLKRFK +EEKLDKF+KTHVLRLLKMD Sbjct: 55 LRQYHDGRPRGPLWRGKKLIGKEALFVILGLKRFKDEEEKLDKFIKTHVLRLLKMD 110 >ref|XP_004145279.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46870-like [Cucumis sativus] gi|449475090|ref|XP_004154371.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46870-like [Cucumis sativus] gi|449508514|ref|XP_004163333.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46870-like [Cucumis sativus] Length = 255 Score = 108 bits (269), Expect = 1e-21 Identities = 58/108 (53%), Positives = 70/108 (64%), Gaps = 3/108 (2%) Frame = -2 Query: 316 MSIRSISRLNVPSYTSLFL---LKHXXXXXXXXXXXNFTLRVPEFSRIPLWDVRFYHDGR 146 M+IR SR +P + S+FL + T P+ SR P+W R YHDGR Sbjct: 1 MAIRWFSRSKLPVFASVFLQGLTRRPIRDVPLPVKSTITDFQPD-SRRPIWGFRLYHDGR 59 Query: 145 PRGPLWRGKKLIGKEALFVILGLKRFKYDEEKLDKFVKTHVLRLLKMD 2 PRGPLWR +K IGKEALFVI GLKRFK DEEK +KF+K+HV RLLK+D Sbjct: 60 PRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKFEKFMKSHVSRLLKLD 107 >gb|EMJ06956.1| hypothetical protein PRUPE_ppa010266mg [Prunus persica] Length = 256 Score = 107 bits (268), Expect = 1e-21 Identities = 60/108 (55%), Positives = 70/108 (64%), Gaps = 3/108 (2%) Frame = -2 Query: 316 MSIRSISRLNVPSYTSLFLLKHXXXXXXXXXXXNFTLRVPEF---SRIPLWDVRFYHDGR 146 M+ R+ SR ++S+ LL+ R+PE S P+ R YHDGR Sbjct: 1 MATRAFSRSKFAIFSSI-LLRGLKRTTTQETPLLRKFRIPESEIESSKPICGFRLYHDGR 59 Query: 145 PRGPLWRGKKLIGKEALFVILGLKRFKYDEEKLDKFVKTHVLRLLKMD 2 PRGPLWRGKKLIGKEAL+VI GLKRFK DEEKL KF+K HVLRLLKMD Sbjct: 60 PRGPLWRGKKLIGKEALYVISGLKRFKDDEEKLGKFIKNHVLRLLKMD 107 >ref|XP_004507153.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46870-like [Cicer arietinum] Length = 261 Score = 103 bits (258), Expect = 2e-20 Identities = 50/70 (71%), Positives = 55/70 (78%) Frame = -2 Query: 211 TLRVPEFSRIPLWDVRFYHDGRPRGPLWRGKKLIGKEALFVILGLKRFKYDEEKLDKFVK 32 T + F +W R YHDGRPRGPLWRGKKLIGKEALFVI GLKRFK +E+ L KF+K Sbjct: 44 THSIAMFEPKSVWGFREYHDGRPRGPLWRGKKLIGKEALFVISGLKRFKDEEDTLHKFIK 103 Query: 31 THVLRLLKMD 2 THVLRLLKMD Sbjct: 104 THVLRLLKMD 113 >gb|ESW04024.1| hypothetical protein PHAVU_011G060800g [Phaseolus vulgaris] Length = 254 Score = 103 bits (257), Expect = 2e-20 Identities = 57/98 (58%), Positives = 68/98 (69%), Gaps = 1/98 (1%) Frame = -2 Query: 292 LNVPSYT-SLFLLKHXXXXXXXXXXXNFTLRVPEFSRIPLWDVRFYHDGRPRGPLWRGKK 116 L VP +T + L+KH +F + P F W R YHDGRPRGPLW+GKK Sbjct: 18 LLVPHFTRTTKLIKHASPPLSFLQSNSF--KTPSF-----W--RLYHDGRPRGPLWKGKK 68 Query: 115 LIGKEALFVILGLKRFKYDEEKLDKFVKTHVLRLLKMD 2 LIGKEALFV+LGLKRFK D++KL KF+K+HVLRLLKMD Sbjct: 69 LIGKEALFVVLGLKRFKDDQDKLQKFIKSHVLRLLKMD 106 >ref|XP_002314145.2| pentatricopeptide repeat-containing family protein [Populus trichocarpa] gi|550331008|gb|EEE88100.2| pentatricopeptide repeat-containing family protein [Populus trichocarpa] Length = 257 Score = 102 bits (254), Expect = 5e-20 Identities = 58/110 (52%), Positives = 74/110 (67%), Gaps = 5/110 (4%) Frame = -2 Query: 316 MSIRSISRLNVPSYTSLFLLKHXXXXXXXXXXXNFTLRVPEFSRIPLWDV----RFYHDG 149 M R++SR +P+++S+ ++ L + + S I + V R YHDG Sbjct: 1 MLTRALSRSKIPNFSSVIVILQNLTTKQSIIDQT-QLPLSKASNIQSFLVPAGLRQYHDG 59 Query: 148 RPRGPLWRGKKLIGKEALFVILGLKRFKY-DEEKLDKFVKTHVLRLLKMD 2 RPRGPLWRGKKLIGKEALFVILGLKRFK D+EKLD+F+KTHV RLLK+D Sbjct: 60 RPRGPLWRGKKLIGKEALFVILGLKRFKNDDDEKLDRFIKTHVFRLLKLD 109 >ref|XP_004291520.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46870-like [Fragaria vesca subsp. vesca] Length = 255 Score = 102 bits (253), Expect = 7e-20 Identities = 56/107 (52%), Positives = 69/107 (64%), Gaps = 2/107 (1%) Frame = -2 Query: 316 MSIRSISRLNVPSYTSLFL--LKHXXXXXXXXXXXNFTLRVPEFSRIPLWDVRFYHDGRP 143 M++R+ SR +++S+ L LK + S P+ R YHDGRP Sbjct: 1 MAVRAFSRSKFSTFSSILLQGLKRTPIRENPFPPKPSSPVSQIQSCQPICGFRLYHDGRP 60 Query: 142 RGPLWRGKKLIGKEALFVILGLKRFKYDEEKLDKFVKTHVLRLLKMD 2 RGPLWRGKKLIGKEAL+VI GLKRFK DEE L KF+K+HVLRLLK+D Sbjct: 61 RGPLWRGKKLIGKEALYVISGLKRFKDDEETLGKFIKSHVLRLLKLD 107 >ref|XP_006404445.1| hypothetical protein EUTSA_v10010650mg [Eutrema salsugineum] gi|557105564|gb|ESQ45898.1| hypothetical protein EUTSA_v10010650mg [Eutrema salsugineum] Length = 257 Score = 101 bits (252), Expect = 9e-20 Identities = 46/53 (86%), Positives = 50/53 (94%) Frame = -2 Query: 160 YHDGRPRGPLWRGKKLIGKEALFVILGLKRFKYDEEKLDKFVKTHVLRLLKMD 2 +HDGRPRGPLWRGKKLIGKEALFVILGLKR K D+EKLDKF+KTHV RLLK+D Sbjct: 57 FHDGRPRGPLWRGKKLIGKEALFVILGLKRLKEDDEKLDKFIKTHVFRLLKLD 109 >gb|EPS64983.1| hypothetical protein M569_09798, partial [Genlisea aurea] Length = 203 Score = 101 bits (252), Expect = 9e-20 Identities = 47/55 (85%), Positives = 50/55 (90%) Frame = -2 Query: 166 RFYHDGRPRGPLWRGKKLIGKEALFVILGLKRFKYDEEKLDKFVKTHVLRLLKMD 2 R YHDGRPRGPLWRGKKLIGKEALFV+ GLKRFK DEEK+D FV THVLRLLK+D Sbjct: 1 RSYHDGRPRGPLWRGKKLIGKEALFVVQGLKRFKDDEEKMDTFVNTHVLRLLKLD 55 >ref|NP_190271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gi|75266318|sp|Q9STF9.1|PP266_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g46870 gi|545719887|pdb|4LEU|A Chain A, Crystal Structure Of Tha8-like Protein From Arabidopsis Thaliana gi|5541672|emb|CAB51178.1| putative protein [Arabidopsis thaliana] gi|26450732|dbj|BAC42475.1| unknown protein [Arabidopsis thaliana] gi|28950815|gb|AAO63331.1| At3g46870 [Arabidopsis thaliana] gi|332644692|gb|AEE78213.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] Length = 257 Score = 101 bits (252), Expect = 9e-20 Identities = 46/53 (86%), Positives = 50/53 (94%) Frame = -2 Query: 160 YHDGRPRGPLWRGKKLIGKEALFVILGLKRFKYDEEKLDKFVKTHVLRLLKMD 2 +HDGRPRGPLWRGKKLIGKEALFVILGLKR K D+EKLDKF+KTHV RLLK+D Sbjct: 57 FHDGRPRGPLWRGKKLIGKEALFVILGLKRLKEDDEKLDKFIKTHVFRLLKLD 109 >ref|XP_006291711.1| hypothetical protein CARUB_v10017876mg [Capsella rubella] gi|565467664|ref|XP_006291712.1| hypothetical protein CARUB_v10017876mg [Capsella rubella] gi|482560418|gb|EOA24609.1| hypothetical protein CARUB_v10017876mg [Capsella rubella] gi|482560419|gb|EOA24610.1| hypothetical protein CARUB_v10017876mg [Capsella rubella] Length = 257 Score = 100 bits (250), Expect = 2e-19 Identities = 46/53 (86%), Positives = 50/53 (94%) Frame = -2 Query: 160 YHDGRPRGPLWRGKKLIGKEALFVILGLKRFKYDEEKLDKFVKTHVLRLLKMD 2 +HDGRPRGPLWRGKKLIGKEALFVILGLKR K D+EKL KF+KTHVLRLLK+D Sbjct: 57 FHDGRPRGPLWRGKKLIGKEALFVILGLKRLKEDDEKLQKFIKTHVLRLLKLD 109 >ref|XP_006858620.1| hypothetical protein AMTR_s00066p00023060 [Amborella trichopoda] gi|548862731|gb|ERN20087.1| hypothetical protein AMTR_s00066p00023060 [Amborella trichopoda] Length = 265 Score = 100 bits (248), Expect = 3e-19 Identities = 47/56 (83%), Positives = 51/56 (91%) Frame = -2 Query: 169 VRFYHDGRPRGPLWRGKKLIGKEALFVILGLKRFKYDEEKLDKFVKTHVLRLLKMD 2 +R YHDGRPRGPLWRGKKLIGKEALF+I GLKRFK DE +LDKFVK+HV RLLKMD Sbjct: 62 MRCYHDGRPRGPLWRGKKLIGKEALFIISGLKRFKDDEGQLDKFVKSHVSRLLKMD 117 >ref|XP_006591821.1| PREDICTED: uncharacterized protein LOC100306428 isoform X1 [Glycine max] Length = 255 Score = 99.0 bits (245), Expect = 6e-19 Identities = 46/55 (83%), Positives = 49/55 (89%) Frame = -2 Query: 166 RFYHDGRPRGPLWRGKKLIGKEALFVILGLKRFKYDEEKLDKFVKTHVLRLLKMD 2 R YHDGRPRGPLW+GKKLIGKEALFVI G KRF DE+KL KF+KTHVLRLLKMD Sbjct: 53 RQYHDGRPRGPLWKGKKLIGKEALFVISGFKRFNDDEDKLHKFIKTHVLRLLKMD 107