BLASTX nr result

ID: Atropa21_contig00037824 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00037824
         (862 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006367861.1| PREDICTED: uncharacterized protein LOC102578...    44   5e-11
gb|AAL30109.1| unknown [Solanum phureja x Solanum stenotomum]          52   2e-08

>ref|XP_006367861.1| PREDICTED: uncharacterized protein LOC102578882, partial [Solanum
           tuberosum]
          Length = 606

 Score = 43.5 bits (101), Expect(3) = 5e-11
 Identities = 16/27 (59%), Positives = 22/27 (81%)
 Frame = -3

Query: 584 VGKFSYGKPDLKEIHKIIPSQCNIKGE 504
           +GKFSYG PD+ ++ K+IP QC +KGE
Sbjct: 45  IGKFSYGWPDILDLRKLIPKQCELKGE 71



 Score = 40.8 bits (94), Expect(3) = 5e-11
 Identities = 18/30 (60%), Positives = 24/30 (80%)
 Frame = -2

Query: 501 IGLLDNRHLLIRLSLFEDYVQMKSTPSYYL 412
           IGLL NR++LIR SL EDYV++ S P +Y+
Sbjct: 74  IGLLCNRYVLIRASLLEDYVKLLSKPQFYI 103



 Score = 29.6 bits (65), Expect(3) = 5e-11
 Identities = 12/24 (50%), Positives = 20/24 (83%)
 Frame = -3

Query: 404 FLQRSCFSLASAVGKPLTLDMATR 333
           F + + FS+A+AVG+PL +D+AT+
Sbjct: 144 FGKETIFSMAAAVGRPLQVDLATQ 167


>gb|AAL30109.1| unknown [Solanum phureja x Solanum stenotomum]
          Length = 126

 Score = 51.6 bits (122), Expect(2) = 2e-08
 Identities = 24/51 (47%), Positives = 33/51 (64%)
 Frame = -3

Query: 659 GEPHVI*KSSEIKRLIIQQILQFAAVGKFSYGKPDLKEIHKIIPSQCNIKG 507
           G+  +     E ++L ++Q LQ+A V KFSYG+PDL E+ K IP Q  IKG
Sbjct: 4   GKTTITWTKKEFEKLTVRQNLQYAVVAKFSYGRPDLYELRKAIPIQLEIKG 54



 Score = 34.7 bits (78), Expect(2) = 2e-08
 Identities = 15/24 (62%), Positives = 18/24 (75%)
 Frame = -2

Query: 501 IGLLDNRHLLIRLSLFEDYVQMKS 430
           IG L+ RH+LIRLSL EDY  + S
Sbjct: 58  IGFLEERHILIRLSLLEDYATLMS 81


Top