BLASTX nr result

ID: Atropa21_contig00037780 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00037780
         (519 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006359825.1| PREDICTED: pentatricopeptide repeat-containi...   127   2e-27
ref|XP_004237781.1| PREDICTED: pentatricopeptide repeat-containi...   120   2e-25
gb|EXC35161.1| hypothetical protein L484_022712 [Morus notabilis]      74   2e-11
ref|XP_006368282.1| pentatricopeptide repeat-containing family p...    70   2e-10
ref|XP_002326772.1| predicted protein [Populus trichocarpa]            70   2e-10
ref|XP_002272860.1| PREDICTED: pentatricopeptide repeat-containi...    68   1e-09
emb|CAN75780.1| hypothetical protein VITISV_012424 [Vitis vinifera]    68   1e-09
ref|XP_006290409.1| hypothetical protein CARUB_v10019081mg [Caps...    66   6e-09
gb|EOY26249.1| Pentatricopeptide repeat-containing protein, puta...    65   9e-09
gb|EMJ21852.1| hypothetical protein PRUPE_ppa003671mg [Prunus pe...    65   9e-09
ref|XP_002531020.1| pentatricopeptide repeat-containing protein,...    64   3e-08
ref|XP_006440940.1| hypothetical protein CICLE_v10019823mg [Citr...    63   4e-08
ref|XP_003553908.2| PREDICTED: pentatricopeptide repeat-containi...    63   5e-08
ref|XP_006485771.1| PREDICTED: pentatricopeptide repeat-containi...    62   6e-08
gb|ESW23095.1| hypothetical protein PHAVU_004G017900g [Phaseolus...    62   1e-07
ref|XP_004308198.1| PREDICTED: pentatricopeptide repeat-containi...    62   1e-07
ref|XP_002878376.1| pentatricopeptide repeat-containing protein ...    60   3e-07
ref|XP_006402489.1| hypothetical protein EUTSA_v10006474mg [Eutr...    60   4e-07
ref|XP_004143709.1| PREDICTED: pentatricopeptide repeat-containi...    58   1e-06
ref|NP_191695.1| pentatricopeptide repeat-containing protein [Ar...    57   3e-06

>ref|XP_006359825.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g61360-like isoform X1 [Solanum tuberosum]
           gi|565388118|ref|XP_006359826.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g61360-like isoform X2 [Solanum tuberosum]
           gi|565388120|ref|XP_006359827.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g61360-like isoform X3 [Solanum tuberosum]
           gi|565388122|ref|XP_006359828.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g61360-like isoform X4 [Solanum tuberosum]
          Length = 504

 Score =  127 bits (319), Expect = 2e-27
 Identities = 64/84 (76%), Positives = 72/84 (85%)
 Frame = +1

Query: 268 MAVVISKRRDKFGQIRRVVGQLNDRFWLSSWLHSVSETKDEIETIARIINDHPFPVEPLQ 447
           MAVVIS R DKFG++ RVVG    RFW SS +HSVSETKDE+ETIARIINDHPFPV+PLQ
Sbjct: 1   MAVVISTRIDKFGRVLRVVGH---RFWSSSLVHSVSETKDEVETIARIINDHPFPVQPLQ 57

Query: 448 PTLQRHISPSILSTTFAENVLGRL 519
           PTL+RH+S SILST F ENV+GRL
Sbjct: 58  PTLKRHVSSSILSTMFVENVIGRL 81


>ref|XP_004237781.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g61360-like [Solanum lycopersicum]
          Length = 504

 Score =  120 bits (301), Expect = 2e-25
 Identities = 62/84 (73%), Positives = 70/84 (83%)
 Frame = +1

Query: 268 MAVVISKRRDKFGQIRRVVGQLNDRFWLSSWLHSVSETKDEIETIARIINDHPFPVEPLQ 447
           M VVIS R DKFG++ RVVGQ   RF  SS +HSVSETKDE+ETIARIINDHPFPV+PLQ
Sbjct: 1   MVVVISTRIDKFGRVLRVVGQ---RFLSSSLVHSVSETKDEVETIARIINDHPFPVQPLQ 57

Query: 448 PTLQRHISPSILSTTFAENVLGRL 519
           P L+RH+S SILST F ENV+GRL
Sbjct: 58  PMLKRHVSSSILSTMFVENVIGRL 81


>gb|EXC35161.1| hypothetical protein L484_022712 [Morus notabilis]
          Length = 548

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 36/49 (73%), Positives = 40/49 (81%)
 Frame = +1

Query: 373 SETKDEIETIARIINDHPFPVEPLQPTLQRHISPSILSTTFAENVLGRL 519
           SETK EIE I RIINDHPFP +PLQPTL +HI  ++LS TF ENVLGRL
Sbjct: 38  SETKIEIERITRIINDHPFPDQPLQPTLLQHIPLAVLSNTFVENVLGRL 86


>ref|XP_006368282.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550346186|gb|ERP64851.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 512

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 34/64 (53%), Positives = 44/64 (68%)
 Frame = +1

Query: 328 QLNDRFWLSSWLHSVSETKDEIETIARIINDHPFPVEPLQPTLQRHISPSILSTTFAENV 507
           Q+  R +++    + S    E+E IARIINDHPFP +PL PTL  HI P++L+T F ENV
Sbjct: 19  QIPKRLFVALSPTATSTQSIEVERIARIINDHPFPNQPLHPTLTHHIPPTLLTTAFVENV 78

Query: 508 LGRL 519
           LGRL
Sbjct: 79  LGRL 82


>ref|XP_002326772.1| predicted protein [Populus trichocarpa]
          Length = 512

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 34/64 (53%), Positives = 44/64 (68%)
 Frame = +1

Query: 328 QLNDRFWLSSWLHSVSETKDEIETIARIINDHPFPVEPLQPTLQRHISPSILSTTFAENV 507
           Q+  R +++    + S    E+E IARIINDHPFP +PL PTL  HI P++L+T F ENV
Sbjct: 19  QIPKRLFVALSPTATSTQSIEVERIARIINDHPFPNQPLHPTLTHHIPPTLLTTAFVENV 78

Query: 508 LGRL 519
           LGRL
Sbjct: 79  LGRL 82


>ref|XP_002272860.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61360
           [Vitis vinifera] gi|296081020|emb|CBI18524.3| unnamed
           protein product [Vitis vinifera]
          Length = 513

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 39/85 (45%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
 Frame = +1

Query: 268 MAVVISKRRDKFGQI-RRVVGQLNDRFWLSSWLHSVSETKDEIETIARIINDHPFPVEPL 444
           M ++ +KR ++  QI +++   LN  F  S   H   E K EI+ + RIINDHPFP  PL
Sbjct: 1   MLLLRTKRSNQPYQIPQKLTLFLNIAFKSSGQSHPSLEIKSEIDRVTRIINDHPFPDHPL 60

Query: 445 QPTLQRHISPSILSTTFAENVLGRL 519
             TL +H+   +LS TF ENVLGRL
Sbjct: 61  HSTLIQHVPKHLLSNTFVENVLGRL 85


>emb|CAN75780.1| hypothetical protein VITISV_012424 [Vitis vinifera]
          Length = 515

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 39/85 (45%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
 Frame = +1

Query: 268 MAVVISKRRDKFGQI-RRVVGQLNDRFWLSSWLHSVSETKDEIETIARIINDHPFPVEPL 444
           M ++ +KR ++  QI +++   LN  F  S   H   E K EI+ + RIINDHPFP  PL
Sbjct: 1   MLLLRTKRSNQPYQIPQKLTLFLNIAFKSSGQSHPSLEIKSEIDRVTRIINDHPFPDHPL 60

Query: 445 QPTLQRHISPSILSTTFAENVLGRL 519
             TL +H+   +LS TF ENVLGRL
Sbjct: 61  HSTLIQHVPKHLLSNTFVENVLGRL 85


>ref|XP_006290409.1| hypothetical protein CARUB_v10019081mg [Capsella rubella]
           gi|482559116|gb|EOA23307.1| hypothetical protein
           CARUB_v10019081mg [Capsella rubella]
          Length = 495

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 34/57 (59%), Positives = 37/57 (64%)
 Frame = +1

Query: 349 LSSWLHSVSETKDEIETIARIINDHPFPVEPLQPTLQRHISPSILSTTFAENVLGRL 519
           +SS L S S  K EIE I RIINDHPFP  P+QP L +HI  S LS  F   VLGRL
Sbjct: 17  ISSSLSSTSRNKTEIERITRIINDHPFPNHPIQPILAKHIPLSSLSPEFVSEVLGRL 73


>gb|EOY26249.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
           cacao]
          Length = 512

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 33/49 (67%), Positives = 36/49 (73%)
 Frame = +1

Query: 373 SETKDEIETIARIINDHPFPVEPLQPTLQRHISPSILSTTFAENVLGRL 519
           SE K EIE I RIINDHPFP EPLQPTL + I    LS +F E+VLGRL
Sbjct: 39  SEIKTEIERITRIINDHPFPDEPLQPTLLQQIPRIALSVSFVESVLGRL 87


>gb|EMJ21852.1| hypothetical protein PRUPE_ppa003671mg [Prunus persica]
          Length = 557

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 32/57 (56%), Positives = 40/57 (70%)
 Frame = +1

Query: 349 LSSWLHSVSETKDEIETIARIINDHPFPVEPLQPTLQRHISPSILSTTFAENVLGRL 519
           +SS     SET  E++ I RIIN+HP+P +PL PTL +HI P  LST+F ENVLG L
Sbjct: 27  ISSQFLPSSETNIEVDRITRIINNHPYPDQPLLPTLLQHIPPHALSTSFVENVLGYL 83


>ref|XP_002531020.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223529395|gb|EEF31358.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 530

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 32/57 (56%), Positives = 41/57 (71%)
 Frame = +1

Query: 349 LSSWLHSVSETKDEIETIARIINDHPFPVEPLQPTLQRHISPSILSTTFAENVLGRL 519
           LS + HS+SE    +E I +IIND+ FP E L PTL +H++P+ LST F ENVLGRL
Sbjct: 50  LSGFTHSISE----VERITKIINDNSFPNESLYPTLLKHLNPAALSTDFVENVLGRL 102


>ref|XP_006440940.1| hypothetical protein CICLE_v10019823mg [Citrus clementina]
           gi|557543202|gb|ESR54180.1| hypothetical protein
           CICLE_v10019823mg [Citrus clementina]
          Length = 500

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 40/79 (50%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
 Frame = +1

Query: 286 KRRDKFGQIRRVVGQLNDRFWLSSWLHSVSETKDEIETIARIINDHPFPVEPLQPTLQRH 465
           KR DKF  I       +DR  L   L S +    EIE I RIINDHPFP +PL PTL +H
Sbjct: 8   KRSDKFPGI-------SDRLAL---LFSTTTQSSEIERITRIINDHPFPDQPLHPTLLQH 57

Query: 466 ISPSI-LSTTFAENVLGRL 519
           +  +  LS+T  ENVLGRL
Sbjct: 58  LPQTTPLSSTLVENVLGRL 76


>ref|XP_003553908.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g61360-like [Glycine max]
          Length = 616

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 27/51 (52%), Positives = 37/51 (72%)
 Frame = +1

Query: 367 SVSETKDEIETIARIINDHPFPVEPLQPTLQRHISPSILSTTFAENVLGRL 519
           S S+   +++T+ R INDHPFP++PLQPTL   + PS  ST+  EN+LGRL
Sbjct: 109 SCSQATVDVDTLTRTINDHPFPLQPLQPTLLHLLPPSTFSTSLVENILGRL 159


>ref|XP_006485771.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g61360-like [Citrus sinensis]
          Length = 499

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 40/79 (50%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
 Frame = +1

Query: 286 KRRDKFGQIRRVVGQLNDRFWLSSWLHSVSETKDEIETIARIINDHPFPVEPLQPTLQRH 465
           KR DKF  I       +DR  L   L S +    EIE I RIINDHPFP +PL PTL +H
Sbjct: 8   KRCDKFPGI-------SDRLAL---LFSTTTQSSEIERITRIINDHPFPDQPLHPTLLQH 57

Query: 466 ISPSI-LSTTFAENVLGRL 519
           +  +  LS+T  ENVLGRL
Sbjct: 58  LPQTTPLSSTLVENVLGRL 76


>gb|ESW23095.1| hypothetical protein PHAVU_004G017900g [Phaseolus vulgaris]
          Length = 605

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 28/51 (54%), Positives = 36/51 (70%)
 Frame = +1

Query: 367 SVSETKDEIETIARIINDHPFPVEPLQPTLQRHISPSILSTTFAENVLGRL 519
           S S+   +++T+ RIINDHPFP++PL  TL   + PS  STT  ENVLGRL
Sbjct: 125 SCSQVAVDVDTLTRIINDHPFPLQPLHATLLHLLPPSTFSTTLVENVLGRL 175


>ref|XP_004308198.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g61360-like [Fragaria vesca subsp. vesca]
          Length = 499

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 30/57 (52%), Positives = 41/57 (71%)
 Frame = +1

Query: 349 LSSWLHSVSETKDEIETIARIINDHPFPVEPLQPTLQRHISPSILSTTFAENVLGRL 519
           LSS   S  E   +I+ I +IIN+HP+P +PLQP L ++I P++LST+F ENVLG L
Sbjct: 28  LSSQCVSSVEADIDIDRITKIINNHPYPDQPLQPALLQNIPPTLLSTSFVENVLGHL 84


>ref|XP_002878376.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297324214|gb|EFH54635.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 498

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 31/56 (55%), Positives = 34/56 (60%)
 Frame = +1

Query: 352 SSWLHSVSETKDEIETIARIINDHPFPVEPLQPTLQRHISPSILSTTFAENVLGRL 519
           SS L S S  + EIE I RIINDHPFP  P+QP   +HI  S LS  F   VLG L
Sbjct: 21  SSSLSSTSRNRTEIELITRIINDHPFPNHPIQPIFTKHIPLSSLSPEFVSEVLGSL 76


>ref|XP_006402489.1| hypothetical protein EUTSA_v10006474mg [Eutrema salsugineum]
           gi|557103588|gb|ESQ43942.1| hypothetical protein
           EUTSA_v10006474mg [Eutrema salsugineum]
          Length = 498

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 29/51 (56%), Positives = 33/51 (64%)
 Frame = +1

Query: 367 SVSETKDEIETIARIINDHPFPVEPLQPTLQRHISPSILSTTFAENVLGRL 519
           S S  + EIE + RIINDHPFP  P+QP L +HI  S LS  F   VLGRL
Sbjct: 27  SSSRNRTEIERVTRIINDHPFPNHPIQPILAKHIPLSSLSPDFVSEVLGRL 77


>ref|XP_004143709.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g61360-like [Cucumis sativus]
           gi|449520004|ref|XP_004167024.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g61360-like [Cucumis sativus]
          Length = 504

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 29/53 (54%), Positives = 36/53 (67%)
 Frame = +1

Query: 361 LHSVSETKDEIETIARIINDHPFPVEPLQPTLQRHISPSILSTTFAENVLGRL 519
           LH  S++  EIE IA+IINDHPFP +PL PTL   I   + S TF  +VLG+L
Sbjct: 31  LHPSSKSTTEIERIAKIINDHPFPDQPLHPTLLHLIPSPLPSNTFLNDVLGQL 83


>ref|NP_191695.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75264589|sp|Q9M2C8.1|PP291_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g61360 gi|6850903|emb|CAB71066.1| putative protein
           [Arabidopsis thaliana] gi|25054868|gb|AAN71923.1|
           unknown protein [Arabidopsis thaliana]
           gi|332646669|gb|AEE80190.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 498

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 31/56 (55%), Positives = 34/56 (60%)
 Frame = +1

Query: 352 SSWLHSVSETKDEIETIARIINDHPFPVEPLQPTLQRHISPSILSTTFAENVLGRL 519
           SS L S S  + EIE I  IIN HPFP  P+QP L +HI  S LS  F   VLGRL
Sbjct: 21  SSSLSSTSINRTEIERITIIINGHPFPNHPIQPILAKHIPLSSLSPEFVSEVLGRL 76


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