BLASTX nr result
ID: Atropa21_contig00037778
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00037778
(778 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri] 221 6e-60
emb|CAJ00277.1| hypothetical protein [Lotus japonicus] 221 2e-55
emb|CAJ00274.1| hypothetical protein [Lotus japonicus] 221 2e-55
emb|CAJ00278.1| hypothetical protein [Lotus japonicus] 220 4e-55
emb|CAN80491.1| hypothetical protein VITISV_042679 [Vitis vinifera] 218 2e-54
emb|CAN81986.1| hypothetical protein VITISV_001568 [Vitis vinifera] 217 3e-54
emb|CAN60890.1| hypothetical protein VITISV_011880 [Vitis vinifera] 215 1e-53
ref|XP_004296329.1| PREDICTED: uncharacterized protein LOC101295... 198 2e-52
gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69... 208 2e-51
gb|AAL68644.1|AF458768_1 polyprotein [Oryza sativa Japonica Group] 194 4e-50
emb|CAE03706.1| OSJNBa0060B20.14 [Oryza sativa Japonica Group] 192 1e-49
gb|AAG13508.1|AC068924_13 putative gag-pol polyprotein [Oryza sa... 190 2e-49
emb|CAN62821.1| hypothetical protein VITISV_013041 [Vitis vinifera] 199 7e-49
gb|AAK98732.1|AC090485_11 Putative retroelement [Oryza sativa Ja... 186 3e-48
gb|ABF93966.1| retrotransposon protein, putative, unclassified, ... 186 3e-48
gb|ABA99961.1| retrotransposon protein, putative, unclassified [... 192 5e-48
emb|CAH66499.1| H0321H01.8 [Oryza sativa Indica Group] 184 2e-47
emb|CAH67116.1| H0502G05.7 [Oryza sativa Indica Group] 188 2e-47
gb|ABA95339.2| retrotransposon protein, putative, unclassified [... 181 4e-47
gb|AAP54937.2| retrotransposon protein, putative, unclassified [... 182 7e-47
>gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]
Length = 1557
Score = 221 bits (562), Expect(2) = 6e-60
Identities = 112/245 (45%), Positives = 158/245 (64%), Gaps = 3/245 (1%)
Frame = -3
Query: 728 PIFTSKIWQELFEMLGVTLNTSTVYHPQSDGQIKVMNRCLETFLRCFFSDSQGYWSSYLA 549
P F S++W+ELF + GV L ST YHPQ+DGQ +V N+ LET+LRC +D+ WS +L
Sbjct: 1278 PTFLSEVWRELFRVHGVDLRFSTAYHPQTDGQTEVTNKTLETYLRCMTADAPQTWSKWLP 1337
Query: 548 TAEWWYNTTFYSSIQTTPYETLYGQPPSLNLPYVVGDSVMKKVDMSLLIREFKFQLLKYH 369
AEWWYNTTF+S+I+ TP+E +YGQPP ++LPY+ G+S VD SL RE +LK+H
Sbjct: 1338 LAEWWYNTTFHSAIKCTPFEIVYGQPPPVHLPYLPGESSSVVVDRSLQKREELIAMLKFH 1397
Query: 368 LKRAQQRMTDQTNKHRSDRQFKEGE*VYLKIQP*K*TTLC*SHFT-KLSATYYVPYQILA 192
L RAQ RM + HRS R+F+ G+ VYLK+QP + +L KLS +Y P+++
Sbjct: 1398 LLRAQNRMKQYADSHRSQREFQVGDFVYLKLQPYRQQSLKTKGVPHKLSPRFYGPFRVTD 1457
Query: 191 EVGAIAYKMSLPPQLLLHPTFHVSQLKKCHKLPIE--ISHPHVLDISRPYCPQPYKILDR 18
+VG +AYK+ LP +H FHVSQLK C P E + ++ D+ +P IL++
Sbjct: 1458 KVGTVAYKLELPQGTAIHNVFHVSQLKLCPNPPSEAPVMPQYLTDVGN--AKEPEAILEK 1515
Query: 17 RMVQK 3
+MV +
Sbjct: 1516 KMVNR 1520
Score = 37.4 bits (85), Expect(2) = 6e-60
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = -1
Query: 775 VYKLHGMPKDIVSDRDP 725
V+KLHGMPKDI SDRDP
Sbjct: 1262 VFKLHGMPKDITSDRDP 1278
>emb|CAJ00277.1| hypothetical protein [Lotus japonicus]
Length = 1508
Score = 221 bits (563), Expect = 2e-55
Identities = 113/249 (45%), Positives = 158/249 (63%), Gaps = 7/249 (2%)
Frame = -3
Query: 728 PIFTSKIWQELFEMLGVTLNTSTVYHPQSDGQIKVMNRCLETFLRCFFSDSQGYWSSYLA 549
P+FTS W + LG++ + +T YHPQSDGQ +V+NRCLE +LR W ++L
Sbjct: 1218 PLFTSTFWTAFLQQLGISQSLTTAYHPQSDGQSEVLNRCLEHYLRAMTWQRPKEWVTWLP 1277
Query: 548 TAEWWYNTTFYSSIQTTPYETLYGQPPSLNLPYVVGDSVMKKVDMSLLIREFKFQLLKYH 369
AEWWYNTT++S+IQTTPYE +YGQPP+++LPY ++++ VD S RE Q L +
Sbjct: 1278 LAEWWYNTTYHSAIQTTPYEVVYGQPPAIHLPYCPQSTIVEAVDRSFTAREQMIQKLHAN 1337
Query: 368 LKRAQQRMTDQTNKHRSDRQFKEGE*VYLKIQP*K*TTLC*SHFTKLSATYYVPYQILAE 189
L RAQ RM Q +KHR+DR+F G+ V LK+QP + ++ KLS ++ PYQ+L
Sbjct: 1338 LMRAQARMKIQADKHRTDREFSVGDWVLLKLQPYRQSSTQHRASEKLSPRFFGPYQVLHR 1397
Query: 188 VGAIAYKMSLPPQLLLHPTFHVSQLKKCHK-------LPIEISHPHVLDISRPYCPQPYK 30
VG +AY ++LPP+ +HPTFHVS LK C LP+E ++ +P P+K
Sbjct: 1398 VGKVAYTLALPPESKIHPTFHVSLLKPCPSPAMPHVPLPLEWG-----NLDQP--KAPFK 1450
Query: 29 ILDRRMVQK 3
IL RRMVQ+
Sbjct: 1451 ILKRRMVQR 1459
>emb|CAJ00274.1| hypothetical protein [Lotus japonicus]
Length = 1508
Score = 221 bits (563), Expect = 2e-55
Identities = 113/249 (45%), Positives = 158/249 (63%), Gaps = 7/249 (2%)
Frame = -3
Query: 728 PIFTSKIWQELFEMLGVTLNTSTVYHPQSDGQIKVMNRCLETFLRCFFSDSQGYWSSYLA 549
P+FTS W + LG++ + +T YHPQSDGQ +V+NRCLE +LR W ++L
Sbjct: 1218 PLFTSTFWTAFLQQLGISQSLTTAYHPQSDGQSEVLNRCLEHYLRAMTWQRPKEWVTWLP 1277
Query: 548 TAEWWYNTTFYSSIQTTPYETLYGQPPSLNLPYVVGDSVMKKVDMSLLIREFKFQLLKYH 369
AEWWYNTT++S+IQTTPYE +YGQPP+++LPY ++++ VD S RE Q L +
Sbjct: 1278 LAEWWYNTTYHSAIQTTPYEVVYGQPPAIHLPYCPQSTIVEAVDRSFTAREQMIQKLHAN 1337
Query: 368 LKRAQQRMTDQTNKHRSDRQFKEGE*VYLKIQP*K*TTLC*SHFTKLSATYYVPYQILAE 189
L RAQ RM Q +KHR+DR+F G+ V LK+QP + ++ KLS ++ PYQ+L
Sbjct: 1338 LMRAQARMKIQADKHRTDREFSVGDWVLLKLQPYRQSSTQHRASEKLSPRFFGPYQVLHR 1397
Query: 188 VGAIAYKMSLPPQLLLHPTFHVSQLKKCHK-------LPIEISHPHVLDISRPYCPQPYK 30
VG +AY ++LPP+ +HPTFHVS LK C LP+E ++ +P P+K
Sbjct: 1398 VGKVAYTLALPPESKIHPTFHVSLLKPCPSPAMPHVPLPLEWG-----NLDQP--TAPFK 1450
Query: 29 ILDRRMVQK 3
IL RRMVQ+
Sbjct: 1451 ILKRRMVQR 1459
>emb|CAJ00278.1| hypothetical protein [Lotus japonicus]
Length = 1508
Score = 220 bits (561), Expect = 4e-55
Identities = 113/249 (45%), Positives = 157/249 (63%), Gaps = 7/249 (2%)
Frame = -3
Query: 728 PIFTSKIWQELFEMLGVTLNTSTVYHPQSDGQIKVMNRCLETFLRCFFSDSQGYWSSYLA 549
P+FTS W + LG++ + +T YHPQSDGQ +V+NRCLE +LR W ++L
Sbjct: 1218 PLFTSTFWTAFLQQLGISQSLTTAYHPQSDGQSEVLNRCLEHYLRAMTWQRPKEWVTWLP 1277
Query: 548 TAEWWYNTTFYSSIQTTPYETLYGQPPSLNLPYVVGDSVMKKVDMSLLIREFKFQLLKYH 369
AEWWYNTT++S+IQTTPYE +YGQPP+++LPY +++ VD S RE Q L +
Sbjct: 1278 LAEWWYNTTYHSAIQTTPYEVVYGQPPAIHLPYCPQSTIVDAVDRSFTAREQMIQKLHAN 1337
Query: 368 LKRAQQRMTDQTNKHRSDRQFKEGE*VYLKIQP*K*TTLC*SHFTKLSATYYVPYQILAE 189
L RAQ RM Q +KHR+DR+F G+ V LK+QP + ++ KLS ++ PYQ+L
Sbjct: 1338 LMRAQARMKIQADKHRTDREFSVGDWVLLKLQPYRQSSTQHRASEKLSPRFFGPYQVLHR 1397
Query: 188 VGAIAYKMSLPPQLLLHPTFHVSQLKKCHK-------LPIEISHPHVLDISRPYCPQPYK 30
VG +AY ++LPP+ +HPTFHVS LK C LP+E ++ +P P+K
Sbjct: 1398 VGKVAYTLALPPESKIHPTFHVSLLKPCPSPAMPHVPLPLEWG-----NLDQP--KAPFK 1450
Query: 29 ILDRRMVQK 3
IL RRMVQ+
Sbjct: 1451 ILKRRMVQR 1459
>emb|CAN80491.1| hypothetical protein VITISV_042679 [Vitis vinifera]
Length = 1412
Score = 218 bits (555), Expect = 2e-54
Identities = 109/242 (45%), Positives = 158/242 (65%)
Frame = -3
Query: 728 PIFTSKIWQELFEMLGVTLNTSTVYHPQSDGQIKVMNRCLETFLRCFFSDSQGYWSSYLA 549
PIFTS WQE F++ GV+L ST YHPQ+DGQ +V+NRC+ET+LRC D+ G W+++++
Sbjct: 1160 PIFTSVFWQEFFKLQGVSLQLSTAYHPQTDGQTEVVNRCIETYLRCMVGDNPGQWANWIS 1219
Query: 548 TAEWWYNTTFYSSIQTTPYETLYGQPPSLNLPYVVGDSVMKKVDMSLLIREFKFQLLKYH 369
AE+WYNT+++SS++ +P+E LYG P L +PY DS ++ +D L RE QLLK+H
Sbjct: 1220 LAEFWYNTSYHSSLKMSPFEALYGYAPPLQIPYFPKDSNVEAIDRVLNERESWLQLLKHH 1279
Query: 368 LKRAQQRMTDQTNKHRSDRQFKEGE*VYLKIQP*K*TTLC*SHFTKLSATYYVPYQILAE 189
L +AQQRM Q +K+R DR+F G+ V LK+Q K ++ S KL YY P++++
Sbjct: 1280 LSKAQQRMKIQADKNRFDREFNIGDMVLLKLQAYKQVSMH-SGGPKLQPRYYGPFKVIDR 1338
Query: 188 VGAIAYKMSLPPQLLLHPTFHVSQLKKCHKLPIEISHPHVLDISRPYCPQPYKILDRRMV 9
+G +AY++ LPP +H FHVS LK H S + + S PQ ILDRR+V
Sbjct: 1339 IGTVAYQLQLPPDAQIHNVFHVSLLKPAHASIQACSSLPISNTSTTLLPQ--AILDRRLV 1396
Query: 8 QK 3
++
Sbjct: 1397 KR 1398
>emb|CAN81986.1| hypothetical protein VITISV_001568 [Vitis vinifera]
Length = 672
Score = 217 bits (553), Expect = 3e-54
Identities = 110/241 (45%), Positives = 157/241 (65%)
Frame = -3
Query: 728 PIFTSKIWQELFEMLGVTLNTSTVYHPQSDGQIKVMNRCLETFLRCFFSDSQGYWSSYLA 549
PIFTS WQE F++ GV+L ST YHPQ+DGQ +V+NRC+ET+LRC D+ G W+++++
Sbjct: 323 PIFTSVFWQEFFKLQGVSLQLSTAYHPQTDGQTEVVNRCIETYLRCMAGDNPGQWANWIS 382
Query: 548 TAEWWYNTTFYSSIQTTPYETLYGQPPSLNLPYVVGDSVMKKVDMSLLIREFKFQLLKYH 369
AE+WYNT+++SS++ +P+E LYG P L +PY DS ++ VD L RE QLLK+H
Sbjct: 383 LAEFWYNTSYHSSLKMSPFEALYGYAPPLQIPYFPKDSNVEAVDRVLNERESWLQLLKHH 442
Query: 368 LKRAQQRMTDQTNKHRSDRQFKEGE*VYLKIQP*K*TTLC*SHFTKLSATYYVPYQILAE 189
L +AQQRM Q +K+R DR+F G+ V LK+Q K ++ S KL YY P++++
Sbjct: 443 LSKAQQRMKIQADKNRFDREFBIGDMVXLKLQAYKQVSMH-SGGPKLQPRYYGPFKVIDR 501
Query: 188 VGAIAYKMSLPPQLLLHPTFHVSQLKKCHKLPIEISHPHVLDISRPYCPQPYKILDRRMV 9
+G +AY++ LPP +H FHVS LK H S + + S PQ ILDRR+V
Sbjct: 502 IGTVAYQLQLPPDAQIHNVFHVSLLKPAHASIQACSSLPISNTSTTLLPQ--AILDRRLV 559
Query: 8 Q 6
+
Sbjct: 560 K 560
>emb|CAN60890.1| hypothetical protein VITISV_011880 [Vitis vinifera]
Length = 1378
Score = 215 bits (548), Expect = 1e-53
Identities = 110/249 (44%), Positives = 159/249 (63%), Gaps = 7/249 (2%)
Frame = -3
Query: 728 PIFTSKIWQELFEMLGVTLNTSTVYHPQSDGQIKVMNRCLETFLRCFFSDSQGYWSSYLA 549
PIFT+ WQE F++ GV+L ST YHPQ+DGQ +V+NRC+ET+LRC D+ G W+++++
Sbjct: 1129 PIFTNVFWQEFFKLQGVSLQLSTAYHPQTDGQTEVVNRCIETYLRCMAGDNPGQWANWIS 1188
Query: 548 TAEWWYNTTFYSSIQTTPYETLYGQPPSLNLPYVVGDSVMKKVDMSLLIREFKFQLLKYH 369
AE+WYNT+++SS++ +P+E LYG P L +PY DS ++ VD L RE QLLK+H
Sbjct: 1189 LAEFWYNTSYHSSLKMSPFEALYGYAPPLQIPYFPKDSNVEAVDRVLNERESWLQLLKHH 1248
Query: 368 LKRAQQRMTDQTNKHRSDRQFKEGE*VYLKIQP*K*TTLC*SHFTKLSATYYVPYQILAE 189
L +AQQRM Q +K+R DR+F G+ V LK+Q K ++ S KL YY P++++
Sbjct: 1249 LSKAQQRMKIQADKNRFDREFNIGDMVLLKLQAYKQVSMY-SGGPKLQPRYYGPFKVIDR 1307
Query: 188 VGAIAYKMSLPPQLLLHPTFHVSQLK-------KCHKLPIEISHPHVLDISRPYCPQPYK 30
+G +AY++ LPP +H FHVS LK C LPI + +L P
Sbjct: 1308 IGTVAYQLQLPPDAQIHNVFHVSLLKPAHASIHACSSLPISNARTTLL---------PEA 1358
Query: 29 ILDRRMVQK 3
ILDRR+V++
Sbjct: 1359 ILDRRLVKR 1367
>ref|XP_004296329.1| PREDICTED: uncharacterized protein LOC101295505 [Fragaria vesca
subsp. vesca]
Length = 2814
Score = 198 bits (503), Expect(2) = 2e-52
Identities = 102/244 (41%), Positives = 148/244 (60%), Gaps = 2/244 (0%)
Frame = -3
Query: 728 PIFTSKIWQELFEMLGVTLNTSTVYHPQSDGQIKVMNRCLETFLRCFFSDSQGYWSSYLA 549
PIF S W+ F + G L+ S+ YHPQSDGQ + +NR LE +LRC + W LA
Sbjct: 1853 PIFMSLFWEAFFALQGTKLSKSSAYHPQSDGQTENLNRTLEQYLRCVVGEKPQDWVKCLA 1912
Query: 548 TAEWWYNTTFYSSIQTTPYETLYGQPPSLNLPYVVGDSVMKKVDMSLLIREFKFQLLKYH 369
AEWWYN+ ++++I +P+E YG PP +PY+ G +V+ + D L RE LLK +
Sbjct: 1913 WAEWWYNSAYHTAIAMSPFEARYGYPPPPVIPYIPGSTVIAQADEQLRKREELLALLKRN 1972
Query: 368 LKRAQQRMTDQTNKHRSDRQFKEGE*VYLKIQP*K*TTLC*SHFTKLSATYYVPYQILAE 189
L+RAQ RM +K ++R F+ G+ VYLK+QP K ++ F KLSA YY P+++L +
Sbjct: 1973 LQRAQARMKHFHDKRHTERSFEVGDMVYLKLQPYKQHSMQRGVFNKLSARYYGPFEVLEK 2032
Query: 188 VGAIAYKMSLPPQLLLHPTFHVSQLKK--CHKLPIEISHPHVLDISRPYCPQPYKILDRR 15
+G++AYK+ LPP +H FHVS LKK + P+ P ++D + P P + RR
Sbjct: 2033 IGSVAYKLKLPPTARIHNVFHVSLLKKKLGDQTPVLADLPPIIDPTNPKW-APAAVFGRR 2091
Query: 14 MVQK 3
MV+K
Sbjct: 2092 MVKK 2095
Score = 35.0 bits (79), Expect(2) = 2e-52
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = -1
Query: 775 VYKLHGMPKDIVSDRDPFSQAKF 707
++KLHGMP +I+SDRDP + F
Sbjct: 1837 IFKLHGMPDNIISDRDPIFMSLF 1859
>gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
thaliana] gi|10998138|dbj|BAB03109.1| retroelement pol
polyprotein [Arabidopsis thaliana]
Length = 1499
Score = 208 bits (529), Expect = 2e-51
Identities = 105/242 (43%), Positives = 155/242 (64%), Gaps = 1/242 (0%)
Frame = -3
Query: 725 IFTSKIWQELFEMLGVTLNTSTVYHPQSDGQIKVMNRCLETFLRCFFSDSQGYWSSYLAT 546
+FTS+ W+E F + GV L ++ YHPQSDGQ +V+NRCLET+LRC D WS +LA
Sbjct: 1223 VFTSEFWREFFTLQGVALKLTSAYHPQSDGQTEVVNRCLETYLRCMCHDRPQLWSKWLAL 1282
Query: 545 AEWWYNTTFYSSIQTTPYETLYGQPPSLNLPYVVGDSVMKKVDMSLLIREFKFQLLKYHL 366
AE+WYNT ++SS + TP+E +YGQ P ++LPY+ G+S + V SL RE LK+HL
Sbjct: 1283 AEYWYNTNYHSSSRMTPFEIVYGQVPPVHLPYLPGESKVAVVARSLQEREDMLLFLKFHL 1342
Query: 365 KRAQQRMTDQTNKHRSDRQFKEGE*VYLKIQP*K*TTLC*SHFTKLSATYYVPYQILAEV 186
RAQ RM ++HR++R+F+ G+ VY+K+QP + ++ KLS Y+ PY+I+
Sbjct: 1343 MRAQHRMKQFADQHRTEREFEIGDYVYVKLQPYRQQSVVMRANQKLSPKYFGPYKIIDRC 1402
Query: 185 GAIAYKMSLPPQLLLHPTFHVSQLK-KCHKLPIEISHPHVLDISRPYCPQPYKILDRRMV 9
G +AYK++LP +HP FHVSQLK + + P V+ + P K+++R+MV
Sbjct: 1403 GEVAYKLALPSYSQVHPVFHVSQLKVLVGNVSTTVHLPSVM--QDVFEKVPEKVVERKMV 1460
Query: 8 QK 3
+
Sbjct: 1461 NR 1462
>gb|AAL68644.1|AF458768_1 polyprotein [Oryza sativa Japonica Group]
Length = 933
Score = 194 bits (493), Expect(2) = 4e-50
Identities = 106/243 (43%), Positives = 152/243 (62%), Gaps = 2/243 (0%)
Frame = -3
Query: 725 IFTSKIWQELFEMLGVTLNTSTVYHPQSDGQIKVMNRCLETFLRCFFSDSQGYWSSYLAT 546
IFTS +W++LF G L+ S+ YHPQSDGQ + +N+CLE FLRCF + WS +L
Sbjct: 602 IFTSALWEQLFLRSGTKLHLSSAYHPQSDGQTERVNQCLEIFLRCFVHATPAKWSLWLHL 661
Query: 545 AEWWYNTTFYSSIQTTPYETLYGQPPSLNLPYVVGDSVMKKVDMSLLIREFKFQLLKYHL 366
AE+WYN++++S++ TP+E LYG PPS + V+ +D L R QLL+ HL
Sbjct: 662 AEFWYNSSYHSALNKTPFEVLYGYPPS-HFGIRADACVISDLDSWLSERHLMTQLLRQHL 720
Query: 365 KRAQQRMTDQTNKHRSDRQFKEGE*VYLKIQP*K*TTLC*SHFTKLSATYYVPYQILAEV 186
RAQQ M Q +K RS R F+ G+ V+LK+QP +++ KLS Y+ PYQIL++V
Sbjct: 721 NRAQQVMKTQADKKRSFRSFQVGDWVFLKLQPYVQSSVAKRANHKLSFRYFGPYQILSKV 780
Query: 185 GAIAYKMSLPPQLLLHPTFHVSQLK--KCHKLPIEISHPHVLDISRPYCPQPYKILDRRM 12
G++AYK+ LP ++HP FHVSQLK + K I+ P++ D + P +ILD R+
Sbjct: 781 GSVAYKLQLPADSMVHPVFHVSQLKGTQNFKHSIQSQLPNITD----HIQYPVQILDTRI 836
Query: 11 VQK 3
+K
Sbjct: 837 QKK 839
Score = 31.2 bits (69), Expect(2) = 4e-50
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = -1
Query: 775 VYKLHGMPKDIVSDRD 728
VYKLHG+P+ I+SDRD
Sbjct: 585 VYKLHGLPQIIISDRD 600
>emb|CAE03706.1| OSJNBa0060B20.14 [Oryza sativa Japonica Group]
Length = 3200
Score = 192 bits (489), Expect(2) = 1e-49
Identities = 106/243 (43%), Positives = 151/243 (62%), Gaps = 2/243 (0%)
Frame = -3
Query: 725 IFTSKIWQELFEMLGVTLNTSTVYHPQSDGQIKVMNRCLETFLRCFFSDSQGYWSSYLAT 546
IFTS +W++LF G L+ S+ YHPQSDGQ + +N+CLE FLRCF + WS +L
Sbjct: 2555 IFTSALWEQLFLRSGTKLHLSSAYHPQSDGQTERVNQCLEIFLRCFVHATPAKWSLWLHL 2614
Query: 545 AEWWYNTTFYSSIQTTPYETLYGQPPSLNLPYVVGDSVMKKVDMSLLIREFKFQLLKYHL 366
AE+WYN++++S++ TP+E LYG PPS + V+ +D L R QLL+ HL
Sbjct: 2615 AEFWYNSSYHSALNKTPFEVLYGYPPS-HFGIRADACVISDLDSWLSERHLMTQLLRQHL 2673
Query: 365 KRAQQRMTDQTNKHRSDRQFKEGE*VYLKIQP*K*TTLC*SHFTKLSATYYVPYQILAEV 186
RAQQ M Q +K RS R F+ G+ V+LK+QP +++ KLS Y PYQIL++V
Sbjct: 2674 NRAQQVMKTQADKKRSFRSFQVGDWVFLKLQPYVQSSVAKRANHKLSFRYLGPYQILSKV 2733
Query: 185 GAIAYKMSLPPQLLLHPTFHVSQLK--KCHKLPIEISHPHVLDISRPYCPQPYKILDRRM 12
G++AYK+ LP ++HP FHVSQLK + K I+ P++ D + P +ILD R+
Sbjct: 2734 GSVAYKLQLPADSMVHPVFHVSQLKGTQNFKHSIQSQLPNITD----HIQYPVQILDTRI 2789
Query: 11 VQK 3
+K
Sbjct: 2790 QKK 2792
Score = 31.2 bits (69), Expect(2) = 1e-49
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = -1
Query: 775 VYKLHGMPKDIVSDRD 728
VYKLHG+P+ I+SDRD
Sbjct: 2538 VYKLHGLPQIIISDRD 2553
>gb|AAG13508.1|AC068924_13 putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1608
Score = 190 bits (482), Expect(2) = 2e-49
Identities = 103/241 (42%), Positives = 145/241 (60%)
Frame = -3
Query: 725 IFTSKIWQELFEMLGVTLNTSTVYHPQSDGQIKVMNRCLETFLRCFFSDSQGYWSSYLAT 546
IFTS+ W +LF G L+ S+ YHPQSDGQ + +N+CLE +LRCF + WSS+L
Sbjct: 1262 IFTSQFWDQLFSKFGTDLHMSSAYHPQSDGQTERVNQCLEIYLRCFVHAAPHKWSSWLYL 1321
Query: 545 AEWWYNTTFYSSIQTTPYETLYGQPPSLNLPYVVGDSVMKKVDMSLLIREFKFQLLKYHL 366
AE+WYNT+F+S++ TP+E LYG PS + + D + + R+F QLL+ HL
Sbjct: 1322 AEFWYNTSFHSTLNKTPFEVLYGYTPS-HFGIGLDDCQIADLHEWHTERKFMQQLLQQHL 1380
Query: 365 KRAQQRMTDQTNKHRSDRQFKEGE*VYLKIQP*K*TTLC*SHFTKLSATYYVPYQILAEV 186
RAQQ+M Q +K RS RQF G+ VYLK+QP T + KL+ YY P+Q+++ V
Sbjct: 1381 NRAQQQMKHQADKKRSFRQFAVGDWVYLKLQPYVQTFVAQRACHKLAFRYYGPFQVMSRV 1440
Query: 185 GAIAYKMSLPPQLLLHPTFHVSQLKKCHKLPIEISHPHVLDISRPYCPQPYKILDRRMVQ 6
G +AY + LP +HP FHVSQLK ++ L S P++ LD+R+V+
Sbjct: 1441 GTVAYHIQLPATSSIHPVFHVSQLKAAVGFSKKVQDE--LPTSLGALQVPFQFLDKRLVK 1498
Query: 5 K 3
K
Sbjct: 1499 K 1499
Score = 33.1 bits (74), Expect(2) = 2e-49
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = -1
Query: 775 VYKLHGMPKDIVSDRDPFSQAKF 707
+YKLHG+P+ I+SDRD ++F
Sbjct: 1245 IYKLHGLPRAIISDRDKIFTSQF 1267
>emb|CAN62821.1| hypothetical protein VITISV_013041 [Vitis vinifera]
Length = 1357
Score = 199 bits (507), Expect = 7e-49
Identities = 103/240 (42%), Positives = 154/240 (64%)
Frame = -3
Query: 722 FTSKIWQELFEMLGVTLNTSTVYHPQSDGQIKVMNRCLETFLRCFFSDSQGYWSSYLATA 543
+T+K+ ++F GV+L ST YHPQ+DGQ +V+NRC+ET+LRC D+ G W+++++ A
Sbjct: 1078 YTTKMVAQVFLDSGVSLQLSTAYHPQTDGQTEVVNRCIETYLRCMAGDNPGQWANWISLA 1137
Query: 542 EWWYNTTFYSSIQTTPYETLYGQPPSLNLPYVVGDSVMKKVDMSLLIREFKFQLLKYHLK 363
E+WYNT+++SS++ +P+E LYG P L +PY DS ++ VD L RE QLLK+HL
Sbjct: 1138 EFWYNTSYHSSLKMSPFEALYGYAPPLQIPYFPKDSNVEAVDRVLNERESWLQLLKHHLS 1197
Query: 362 RAQQRMTDQTNKHRSDRQFKEGE*VYLKIQP*K*TTLC*SHFTKLSATYYVPYQILAEVG 183
AQQRM Q +K+R DR+F G+ V LK+Q K ++ S KL YY P++++ +G
Sbjct: 1198 MAQQRMKIQADKNRFDREFNIGDMVLLKLQAYKQVSMH-SGGPKLQPRYYGPFKVIDRIG 1256
Query: 182 AIAYKMSLPPQLLLHPTFHVSQLKKCHKLPIEISHPHVLDISRPYCPQPYKILDRRMVQK 3
+AY++ LPP +H FHVS LK H S + + S PQ IL+RR+V++
Sbjct: 1257 TVAYQLQLPPDAQIHNVFHVSLLKPAHASIQACSSLPISNTSTTLLPQ--AILNRRLVKR 1314
>gb|AAK98732.1|AC090485_11 Putative retroelement [Oryza sativa Japonica Group]
Length = 1923
Score = 186 bits (471), Expect(2) = 3e-48
Identities = 104/243 (42%), Positives = 149/243 (61%), Gaps = 2/243 (0%)
Frame = -3
Query: 725 IFTSKIWQELFEMLGVTLNTSTVYHPQSDGQIKVMNRCLETFLRCFFSDSQGYWSSYLAT 546
IFTSK+W+ LF G+ L+ S+ YHPQSDGQ K +N+CLE FLRCF + + W ++L
Sbjct: 699 IFTSKLWEFLFLKSGIALHLSSAYHPQSDGQTKRVNQCLEMFLRCFTNAAPFKWVTWLHL 758
Query: 545 AEWWYNTTFYSSIQTTPYETLYGQPPSLNLPYVVGDSVMKKVDMSLLIREFKFQLLKYHL 366
A +WYNT F+S++ TP+E LYG P L L + + + + L R+ +LL+ HL
Sbjct: 759 AGYWYNTCFHSALNKTPFEVLYGHNP-LQLGVTMETCAIPDLAVWLHERKLMAELLQQHL 817
Query: 365 KRAQQRMTDQTNKHRSDRQFKEGE*VYLKIQP*K*TTLC*SHFTKLSATYYVPYQILAEV 186
R QQ+M +K+RS R+F G+ V+LK+QP ++ KL+ +Y P+QILA V
Sbjct: 818 HRVQQKMKFHADKNRSFREFAVGDWVFLKLQPYVQKSVASRACHKLAFKFYGPFQILARV 877
Query: 185 GAIAYKMSLPPQLLLHPTFHVSQLKKCH--KLPIEISHPHVLDISRPYCPQPYKILDRRM 12
G +AYK+ LP +HP FHVSQLK H K ++ P L S Y P +ILD+R+
Sbjct: 878 GTVAYKLQLPDDSTIHPVFHVSQLKVAHGFKHQVQSRLPKFLK-STVY---PLQILDQRL 933
Query: 11 VQK 3
++K
Sbjct: 934 IRK 936
Score = 33.5 bits (75), Expect(2) = 3e-48
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = -1
Query: 775 VYKLHGMPKDIVSDRDPFSQAK 710
+YKLHGMPK ++SDRD +K
Sbjct: 682 IYKLHGMPKVLISDRDKIFTSK 703
>gb|ABF93966.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
Length = 1920
Score = 186 bits (471), Expect(2) = 3e-48
Identities = 104/243 (42%), Positives = 149/243 (61%), Gaps = 2/243 (0%)
Frame = -3
Query: 725 IFTSKIWQELFEMLGVTLNTSTVYHPQSDGQIKVMNRCLETFLRCFFSDSQGYWSSYLAT 546
IFTSK+W+ LF G+ L+ S+ YHPQSDGQ K +N+CLE FLRCF + + W ++L
Sbjct: 699 IFTSKLWEFLFLKSGIALHLSSAYHPQSDGQTKRVNQCLEMFLRCFTNAAPFKWVTWLHL 758
Query: 545 AEWWYNTTFYSSIQTTPYETLYGQPPSLNLPYVVGDSVMKKVDMSLLIREFKFQLLKYHL 366
A +WYNT F+S++ TP+E LYG P L L + + + + L R+ +LL+ HL
Sbjct: 759 AGYWYNTCFHSALNKTPFEVLYGHNP-LQLGVTMETCAIPDLAVWLHERKLMAELLQQHL 817
Query: 365 KRAQQRMTDQTNKHRSDRQFKEGE*VYLKIQP*K*TTLC*SHFTKLSATYYVPYQILAEV 186
R QQ+M +K+RS R+F G+ V+LK+QP ++ KL+ +Y P+QILA V
Sbjct: 818 HRVQQKMKFHADKNRSFREFAVGDWVFLKLQPYVQKSVASRACHKLAFKFYGPFQILARV 877
Query: 185 GAIAYKMSLPPQLLLHPTFHVSQLKKCH--KLPIEISHPHVLDISRPYCPQPYKILDRRM 12
G +AYK+ LP +HP FHVSQLK H K ++ P L S Y P +ILD+R+
Sbjct: 878 GTVAYKLQLPDDSTIHPVFHVSQLKVAHGFKHQVQSRLPKFLK-STVY---PLQILDQRL 933
Query: 11 VQK 3
++K
Sbjct: 934 IRK 936
Score = 33.5 bits (75), Expect(2) = 3e-48
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = -1
Query: 775 VYKLHGMPKDIVSDRDPFSQAK 710
+YKLHGMPK ++SDRD +K
Sbjct: 682 IYKLHGMPKVLISDRDKIFTSK 703
>gb|ABA99961.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1619
Score = 192 bits (487), Expect(2) = 5e-48
Identities = 106/243 (43%), Positives = 145/243 (59%), Gaps = 2/243 (0%)
Frame = -3
Query: 725 IFTSKIWQELFEMLGVTLNTSTVYHPQSDGQIKVMNRCLETFLRCFFSDSQGYWSSYLAT 546
IFTS +W LF + G L S+ YHPQSD Q + MN+CL+TFLRCF S WS +LA
Sbjct: 1284 IFTSNLWTTLFRLAGTQLRMSSSYHPQSDRQTERMNQCLKTFLRCFVHASPSQWSRWLAL 1343
Query: 545 AEWWYNTTFYSSIQTTPYETLYGQPPS-LNLPYVVGDSVMKKVDMSLLIREFKFQLLKYH 369
AE+WYNT+F+SS+ TTP+E LYG P L S + D L R+ L++ H
Sbjct: 1344 AEYWYNTSFHSSLGTTPFEVLYGHKPRYFGLTASAACSAPELSDW-LHERDKMQTLIREH 1402
Query: 368 LKRAQQRMTDQTNKHRSDRQFKEGE*VYLKIQP*K*TTLC*SHFTKLSATYYVPYQILAE 189
L RAQ RM Q + S+R F G+ VY+K+QP ++ KLS +Y P+Q+LA+
Sbjct: 1403 LLRAQMRMKHQADTKHSERSFAVGDWVYMKLQPFVQQSVVTCTNRKLSFRFYGPFQVLAK 1462
Query: 188 VGAIAYKMSLPPQLLLHPTFHVSQLKKCHKLPIEI-SHPHVLDISRPYCPQPYKILDRRM 12
VG++AY++ LPP L+HP HVSQL K ++ S +LD + P P +++DRR
Sbjct: 1463 VGSVAYRLDLPPSCLIHPVIHVSQLNKAVAPSDQVHSKLPILDDADAVTPVPQQVIDRRS 1522
Query: 11 VQK 3
V K
Sbjct: 1523 VHK 1525
Score = 26.6 bits (57), Expect(2) = 5e-48
Identities = 8/16 (50%), Positives = 15/16 (93%)
Frame = -1
Query: 775 VYKLHGMPKDIVSDRD 728
+++LHG+P+ I+SD+D
Sbjct: 1267 IHRLHGLPEAIISDQD 1282
>emb|CAH66499.1| H0321H01.8 [Oryza sativa Indica Group]
Length = 1602
Score = 184 bits (468), Expect(2) = 2e-47
Identities = 100/243 (41%), Positives = 148/243 (60%), Gaps = 2/243 (0%)
Frame = -3
Query: 725 IFTSKIWQELFEMLGVTLNTSTVYHPQSDGQIKVMNRCLETFLRCFFSDSQGYWSSYLAT 546
IFTS++W++LF G L+ S+ YHPQSDGQ + +N+CLE +LRCF + W S+L
Sbjct: 1246 IFTSQLWEQLFLRAGTKLHYSSAYHPQSDGQTERVNQCLEIYLRCFVHSTPSKWYSWLHL 1305
Query: 545 AEWWYNTTFYSSIQTTPYETLYGQPPSLNLPYVVGDSVMKKVDMSLLIREFKFQLLKYHL 366
AE+WYN+T++SS+ TTP+E LYG PP+ + D + ++ + L R+F QL++ HL
Sbjct: 1306 AEYWYNSTYHSSLGTTPFEVLYGYPPN-HFGISSRDCAIPELSVWLRDRKFMQQLVQQHL 1364
Query: 365 KRAQQRMTDQTNKHRSDRQFKEGE*VYLKIQP*K*TTLC*SHFTKLSATYYVPYQILAEV 186
RAQQ+M +K RS RQF G+ VYLK+QP +++ KL+ YY P+Q++ ++
Sbjct: 1365 HRAQQQMKHFADKKRSFRQFTIGDWVYLKLQPYVQSSVAPRANHKLAFKYYGPFQVIDKL 1424
Query: 185 GAIAYKMSLPPQLLLHPTFHVSQLKKCHKLPIEISHPHVLDISRPYC--PQPYKILDRRM 12
G +AYK+ LP +HP FHVS LK + P L + P ILD+R+
Sbjct: 1425 GTVAYKLQLPETSSVHPVFHVSLLKPAK----GFTQPAFLQLPSEVVSWQLPLAILDQRL 1480
Query: 11 VQK 3
+K
Sbjct: 1481 AKK 1483
Score = 32.0 bits (71), Expect(2) = 2e-47
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = -1
Query: 775 VYKLHGMPKDIVSDRD 728
+YKLHG+P+ IVSDRD
Sbjct: 1229 IYKLHGLPQTIVSDRD 1244
>emb|CAH67116.1| H0502G05.7 [Oryza sativa Indica Group]
Length = 642
Score = 188 bits (477), Expect(2) = 2e-47
Identities = 101/245 (41%), Positives = 149/245 (60%), Gaps = 4/245 (1%)
Frame = -3
Query: 725 IFTSKIWQELFEMLGVTLNTSTVYHPQSDGQIKVMNRCLETFLRCFFSDSQGYWSSYLAT 546
+FTS++W+ LFE G L+ S+ YHPQSD Q + +N+CLE +LRCF W+++L
Sbjct: 281 VFTSQLWEHLFEGAGTKLHFSSAYHPQSDAQTERVNQCLEIYLRCFVHSVPTKWAAWLHL 340
Query: 545 AEWWYNTTFYSSIQTTPYETLYGQPPSLNLPYVVGDSVMKKVDMSLLIREFKF--QLLKY 372
AE+WYNT+F+SS+Q TP+E LYG PS + +G D++ ++E + L++
Sbjct: 341 AEYWYNTSFHSSVQATPFEVLYGHSPS---HFGIGSQDCAIPDLAQWLKERRLMQNLVQQ 397
Query: 371 HLKRAQQRMTDQTNKHRSDRQFKEGE*VYLKIQP*K*TTLC*SHFTKLSATYYVPYQILA 192
HL RAQQ+M +K RS R F+ G+ VYLK+QP T++ KL+ Y+ PYQ+ A
Sbjct: 398 HLHRAQQQMKHFADKKRSFRSFEVGDWVYLKLQPYVQTSVAVRANHKLAFKYFGPYQVTA 457
Query: 191 EVGAIAYKMSLPPQLLLHPTFHVSQLKKCHKLPIEISHP--HVLDISRPYCPQPYKILDR 18
++G +AY++ LP +HP FHVSQLK I + P H L S P +ILDR
Sbjct: 458 KIGTVAYQLQLPSSTSIHPVFHVSQLKSA----IGFTGPVQHQLPASTAPLQVPLRILDR 513
Query: 17 RMVQK 3
R+ ++
Sbjct: 514 RLTKR 518
Score = 28.1 bits (61), Expect(2) = 2e-47
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = -1
Query: 775 VYKLHGMPKDIVSDRD 728
++KLHG+P I+SDRD
Sbjct: 264 IFKLHGLPLVIISDRD 279
>gb|ABA95339.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1348
Score = 181 bits (459), Expect(2) = 4e-47
Identities = 97/241 (40%), Positives = 145/241 (60%)
Frame = -3
Query: 725 IFTSKIWQELFEMLGVTLNTSTVYHPQSDGQIKVMNRCLETFLRCFFSDSQGYWSSYLAT 546
IFTS+ W+ LF G L+ S+ YHPQSDGQ + +N+C+E FLRCF + W+++L
Sbjct: 1028 IFTSQFWEYLFTKSGTELHMSSAYHPQSDGQTERVNQCVELFLRCFVHATPTKWAAWLHL 1087
Query: 545 AEWWYNTTFYSSIQTTPYETLYGQPPSLNLPYVVGDSVMKKVDMSLLIREFKFQLLKYHL 366
AE+WYN ++S+++ TP+E +YG P+ + + D + + L R+F QL++ HL
Sbjct: 1088 AEFWYNNAYHSAVKQTPFEVIYGHQPA-HFGITMEDCAVPDLQEWLRDRKFMHQLIQQHL 1146
Query: 365 KRAQQRMTDQTNKHRSDRQFKEGE*VYLKIQP*K*TTLC*SHFTKLSATYYVPYQILAEV 186
RAQQ+M +K+RS R+F+ G+ VYLKIQP T++ KLS Y+ P++I +V
Sbjct: 1147 HRAQQQMKAYADKNRSFREFQPGDWVYLKIQPYVQTSVARRANHKLSFKYFGPFEIQHKV 1206
Query: 185 GAIAYKMSLPPQLLLHPTFHVSQLKKCHKLPIEISHPHVLDISRPYCPQPYKILDRRMVQ 6
G +AYK+ LP L+HP HVSQLK + H L S P + LD+R+ +
Sbjct: 1207 GQVAYKLVLPNTCLIHPVVHVSQLKAAKGFQPALQHS--LPSSLGSLEIPVQFLDQRVAK 1264
Query: 5 K 3
K
Sbjct: 1265 K 1265
Score = 34.3 bits (77), Expect(2) = 4e-47
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = -1
Query: 775 VYKLHGMPKDIVSDRDPFSQAKF 707
+YKLHGMP+ IVSDRD ++F
Sbjct: 1011 IYKLHGMPRVIVSDRDKIFTSQF 1033
>gb|AAP54937.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1477
Score = 182 bits (462), Expect(2) = 7e-47
Identities = 97/245 (39%), Positives = 152/245 (62%), Gaps = 4/245 (1%)
Frame = -3
Query: 725 IFTSKIWQELFEMLGVTLNTSTVYHPQSDGQIKVMNRCLETFLRCFFSDSQGYWSSYLAT 546
+FTS++W+ LF G L+ S+ YHPQ+DGQ + +NRCLE FLRCF + W+++L
Sbjct: 1219 VFTSQLWEHLFTKSGTKLHMSSSYHPQTDGQTERVNRCLEIFLRCFIHVTPTKWANWLYL 1278
Query: 545 AEWWYNTTFYSSIQTTPYETLYGQPPSLNLPYVVGDSVMKKVDMSLLIREFKFQLLKYHL 366
AE+WYNT+++SS+ TP+E +Y P+ + + D + +D+ L R+ QL++ HL
Sbjct: 1279 AEFWYNTSYHSSVHKTPFEVIYRYQPT-HFGISMHDCEIPDLDLWLKDRDLINQLIQQHL 1337
Query: 365 KRAQQRMTDQTNKHRSDRQFKEGE*VYLKIQP*K*TTLC*SHFTKLSATYYVPYQILAEV 186
+A+Q+M +K+R+ R+F+EG+ VYLK+QP +++ KLS Y+ P+Q+L V
Sbjct: 1338 HQAEQQMKAYADKNRTFREFQEGDWVYLKLQPYVQSSVARRANHKLSFKYFGPFQVLQRV 1397
Query: 185 GAIAYKMSLPPQLLLHPTFHVSQLKKCHKLPIEISHPHVLDISRPY----CPQPYKILDR 18
G +AYK++LPP +H HVSQLK +PHVL + P+ P + LDR
Sbjct: 1398 GLVAYKLALPPSCHIHLVIHVSQLKVARGY-----NPHVLS-TEPFQWNHWQSPQQFLDR 1451
Query: 17 RMVQK 3
R+ +K
Sbjct: 1452 RITKK 1456
Score = 32.3 bits (72), Expect(2) = 7e-47
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = -1
Query: 775 VYKLHGMPKDIVSDRD 728
VYKLHGMP+ I+SDRD
Sbjct: 1202 VYKLHGMPQVIISDRD 1217