BLASTX nr result
ID: Atropa21_contig00037753
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00037753
(1194 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003589921.1| Polymerase [Medicago truncatula] gi|35547896... 67 1e-13
gb|ABD32582.1| Integrase, catalytic region; Zinc finger, CCHC-ty... 66 5e-12
gb|ABE88110.1| Reverse transcriptase (RNA-dependent DNA polymera... 65 9e-12
emb|CAN67702.1| hypothetical protein VITISV_041588 [Vitis vinifera] 58 2e-11
gb|EOX94158.1| Uncharacterized protein TCM_003521 [Theobroma cacao] 63 3e-11
emb|CAN72461.1| hypothetical protein VITISV_025872 [Vitis vinifera] 60 3e-11
gb|ABM55238.1| integrase [Beta vulgaris] 67 4e-11
gb|ABH08430.1| putative integrase [Beta vulgaris] 67 4e-11
gb|ABA97696.1| retrotransposon protein, putative, unclassified [... 59 6e-11
emb|CAN62460.1| hypothetical protein VITISV_035911 [Vitis vinifera] 58 7e-11
emb|CAN68672.1| hypothetical protein VITISV_032168 [Vitis vinifera] 59 8e-11
emb|CAE01974.2| OSJNBb0051N19.3 [Oryza sativa Japonica Group] 59 9e-11
emb|CAN71189.1| hypothetical protein VITISV_005044 [Vitis vinifera] 58 1e-10
emb|CAN65058.1| hypothetical protein VITISV_008902 [Vitis vinifera] 59 1e-10
emb|CAN71808.1| hypothetical protein VITISV_011726 [Vitis vinifera] 61 1e-10
emb|CAN83181.1| hypothetical protein VITISV_013310 [Vitis vinifera] 60 1e-10
emb|CAN68742.1| hypothetical protein VITISV_036839 [Vitis vinifera] 60 1e-10
emb|CAN66543.1| hypothetical protein VITISV_036480 [Vitis vinifera] 58 1e-10
gb|AAM74419.1|AC123594_2 Putative retroelement [Oryza sativa Jap... 60 2e-10
gb|AAN05363.1| Putative retroelement [Oryza sativa Japonica Group] 60 2e-10
>ref|XP_003589921.1| Polymerase [Medicago truncatula] gi|355478969|gb|AES60172.1|
Polymerase [Medicago truncatula]
Length = 201
Score = 66.6 bits (161), Expect(2) = 1e-13
Identities = 29/54 (53%), Positives = 36/54 (66%)
Frame = +3
Query: 3 LLWMIYQLSDYDLLFKPVKIYCDNFSVIYLTKNRVHHSSANHIYTKHHFIRHQI 164
+LW+ QL DY L + V IYCDN S I L+KN +HHS + HI KHHFIR +
Sbjct: 103 ILWVRNQLEDYSLRYTSVPIYCDNTSAINLSKNPIHHSRSKHIEIKHHFIRDHV 156
Score = 37.4 bits (85), Expect(2) = 1e-13
Identities = 20/35 (57%), Positives = 24/35 (68%)
Frame = +2
Query: 176 IELQFGCTEK*LADNFTKPLLEERFCMLRESLRII 280
I L F E LAD FTKPL+E+RF L+E L+II
Sbjct: 161 IALSFVDIENQLADIFTKPLVEDRFNFLKEKLQII 195
>gb|ABD32582.1| Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase
aspartic, catalytic [Medicago truncatula]
Length = 1715
Score = 66.2 bits (160), Expect(2) = 5e-12
Identities = 30/60 (50%), Positives = 40/60 (66%)
Frame = +3
Query: 3 LLWMIYQLSDYDLLFKPVKIYCDNFSVIYLTKNRVHHSSANHIYTKHHFIRHQILRELLN 182
LLWM +QL DY + + IYCDN +VI L+KN + HS A HI KHHFIR + + +L+
Sbjct: 1619 LLWMKHQLEDYQINANSIPIYCDNTAVICLSKNPILHSRAKHIEIKHHFIRDYVQKGILD 1678
Score = 32.3 bits (72), Expect(2) = 5e-12
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +2
Query: 170 GAIELQFGCTEK*LADNFTKPLLEERFCMLRESLRI 277
G +++QF TE AD FTKPL ERF ++++L +
Sbjct: 1675 GILDIQFIDTEHQWADIFTKPLSVERFDFIKKNLNM 1710
>gb|ABE88110.1| Reverse transcriptase (RNA-dependent DNA polymerase), putative
[Medicago truncatula]
Length = 1654
Score = 64.7 bits (156), Expect(2) = 9e-12
Identities = 29/60 (48%), Positives = 39/60 (65%)
Frame = +3
Query: 3 LLWMIYQLSDYDLLFKPVKIYCDNFSVIYLTKNRVHHSSANHIYTKHHFIRHQILRELLN 182
LLWM +QL DY + + IYCDN + I L+KN + HS A HI KHHFIR + + +L+
Sbjct: 1558 LLWMKHQLEDYQINANSIPIYCDNTAAICLSKNPILHSRAKHIEIKHHFIRDYVQKGILD 1617
Score = 33.1 bits (74), Expect(2) = 9e-12
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +2
Query: 170 GAIELQFGCTEK*LADNFTKPLLEERFCMLRESLRI 277
G ++LQF TE AD FTKPL ERF ++++L +
Sbjct: 1614 GILDLQFIDTEHQWADIFTKPLSVERFDFIKKNLNM 1649
>emb|CAN67702.1| hypothetical protein VITISV_041588 [Vitis vinifera]
Length = 334
Score = 58.2 bits (139), Expect(2) = 2e-11
Identities = 26/51 (50%), Positives = 34/51 (66%)
Frame = +3
Query: 3 LLWMIYQLSDYDLLFKPVKIYCDNFSVIYLTKNRVHHSSANHIYTKHHFIR 155
+LWM LSD++L F+ V I CDN S I ++KN V HS HI +HHF+R
Sbjct: 240 ILWMKQTLSDFNLSFEHVPIKCDNTSAINISKNPVQHSRTKHIEIRHHFLR 290
Score = 38.5 bits (88), Expect(2) = 2e-11
Identities = 20/38 (52%), Positives = 26/38 (68%)
Frame = +2
Query: 170 GAIELQFGCTEK*LADNFTKPLLEERFCMLRESLRIIA 283
G I L+F T+ LAD FTKPL EE+F +R LR+I+
Sbjct: 296 GDITLEFVSTKYQLADIFTKPLSEEQFSDIRRQLRVIS 333
>gb|EOX94158.1| Uncharacterized protein TCM_003521 [Theobroma cacao]
Length = 1092
Score = 63.2 bits (152), Expect(2) = 3e-11
Identities = 26/56 (46%), Positives = 36/56 (64%)
Frame = +3
Query: 3 LLWMIYQLSDYDLLFKPVKIYCDNFSVIYLTKNRVHHSSANHIYTKHHFIRHQILR 170
+LW+ QL DY++ V IYCDN S I ++KN V HS HI +HHFIR +++
Sbjct: 995 ILWIKQQLKDYEITMHNVSIYCDNTSAINISKNSVQHSKTKHIEIRHHFIRDHVVK 1050
Score = 33.1 bits (74), Expect(2) = 3e-11
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +2
Query: 176 IELQFGCTEK*LADNFTKPLLEERFCMLRESLRII 280
I++ F T L D FTKPL E+RFC +R +L ++
Sbjct: 1053 IKIDFVNTLYQLVDIFTKPLSEDRFCEIRRNLGMV 1087
>emb|CAN72461.1| hypothetical protein VITISV_025872 [Vitis vinifera]
Length = 887
Score = 59.7 bits (143), Expect(2) = 3e-11
Identities = 26/51 (50%), Positives = 35/51 (68%)
Frame = +3
Query: 3 LLWMIYQLSDYDLLFKPVKIYCDNFSVIYLTKNRVHHSSANHIYTKHHFIR 155
+LWM LSD++L+F+ V I CDN S I ++KN V HS HI +HHF+R
Sbjct: 793 ILWMKQTLSDFNLIFEHVPIKCDNTSAINISKNPVQHSRTKHIEIRHHFLR 843
Score = 36.2 bits (82), Expect(2) = 3e-11
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = +2
Query: 170 GAIELQFGCTEK*LADNFTKPLLEERFCMLRESLRIIA 283
G I L+F T+ LAD FTKPL EE+F +R L +I+
Sbjct: 849 GDITLEFVSTKDQLADIFTKPLSEEQFVDIRRQLGVIS 886
>gb|ABM55238.1| integrase [Beta vulgaris]
Length = 1516
Score = 66.6 bits (161), Expect(2) = 4e-11
Identities = 28/59 (47%), Positives = 41/59 (69%)
Frame = +3
Query: 3 LLWMIYQLSDYDLLFKPVKIYCDNFSVIYLTKNRVHHSSANHIYTKHHFIRHQILRELL 179
+LW+ QLSDY + F+ V IYCDN S I ++K+ VHHS HI+ +HHF+R + + L+
Sbjct: 1421 MLWIKQQLSDYGINFECVPIYCDNTSAISISKDPVHHSRVKHIHIRHHFLRENVEKGLI 1479
Score = 28.9 bits (63), Expect(2) = 4e-11
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +2
Query: 170 GAIELQFGCTEK*LADNFTKPLLEERFCMLRESLRII 280
G I+L+F T+ +AD TKPL +R+ LR L +I
Sbjct: 1477 GLIKLEFCQTDYQIADILTKPLQRDRYEKLRLELCLI 1513
>gb|ABH08430.1| putative integrase [Beta vulgaris]
Length = 1516
Score = 66.6 bits (161), Expect(2) = 4e-11
Identities = 28/59 (47%), Positives = 41/59 (69%)
Frame = +3
Query: 3 LLWMIYQLSDYDLLFKPVKIYCDNFSVIYLTKNRVHHSSANHIYTKHHFIRHQILRELL 179
+LW+ QLSDY + F+ V IYCDN S I ++K+ VHHS HI+ +HHF+R + + L+
Sbjct: 1421 MLWIKQQLSDYGINFECVPIYCDNTSAISISKDPVHHSRVKHIHIRHHFLRENVEKGLI 1479
Score = 28.9 bits (63), Expect(2) = 4e-11
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +2
Query: 170 GAIELQFGCTEK*LADNFTKPLLEERFCMLRESLRII 280
G I+L+F T+ +AD TKPL +R+ LR L +I
Sbjct: 1477 GLIKLEFCQTDYQIADILTKPLQRDRYEKLRLELCLI 1513
>gb|ABA97696.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1514
Score = 59.3 bits (142), Expect(2) = 6e-11
Identities = 24/54 (44%), Positives = 34/54 (62%)
Frame = +3
Query: 3 LLWMIYQLSDYDLLFKPVKIYCDNFSVIYLTKNRVHHSSANHIYTKHHFIRHQI 164
+LW++ L DYDL F+ V ++CDN S I + KN V HS HI + HF+R +
Sbjct: 1416 ILWLLSTLKDYDLTFEKVSLFCDNTSAINIAKNPVQHSRTKHIDIRFHFLRDHV 1469
Score = 35.8 bits (81), Expect(2) = 6e-11
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = +2
Query: 170 GAIELQFGCTEK*LADNFTKPLLEERFCMLRESLRII 280
G +E+QF T+ LAD FTKPL RF LR L II
Sbjct: 1472 GDVEMQFFDTKLQLADIFTKPLDSNRFAFLRGELGII 1508
>emb|CAN62460.1| hypothetical protein VITISV_035911 [Vitis vinifera]
Length = 557
Score = 58.2 bits (139), Expect(2) = 7e-11
Identities = 26/51 (50%), Positives = 34/51 (66%)
Frame = +3
Query: 3 LLWMIYQLSDYDLLFKPVKIYCDNFSVIYLTKNRVHHSSANHIYTKHHFIR 155
+LWM LSD++L F+ V I CDN S I ++KN V HS HI +HHF+R
Sbjct: 463 ILWMKQTLSDFNLSFEHVPIKCDNTSAINISKNPVQHSRTKHIEIRHHFLR 513
Score = 36.6 bits (83), Expect(2) = 7e-11
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = +2
Query: 170 GAIELQFGCTEK*LADNFTKPLLEERFCMLRESLRIIA 283
G I L+F T+ LAD FTKPL EE+F +R L +I+
Sbjct: 519 GDITLEFESTKDQLADIFTKPLSEEQFSDIRRQLGVIS 556
>emb|CAN68672.1| hypothetical protein VITISV_032168 [Vitis vinifera]
Length = 168
Score = 58.9 bits (141), Expect(2) = 8e-11
Identities = 26/51 (50%), Positives = 34/51 (66%)
Frame = +3
Query: 3 LLWMIYQLSDYDLLFKPVKIYCDNFSVIYLTKNRVHHSSANHIYTKHHFIR 155
+LWM LSD++L F+ V I CDN S I ++KN V HS HI +HHF+R
Sbjct: 74 ILWMKQTLSDFNLFFEHVPIKCDNTSAINISKNLVQHSRTKHIEIRHHFLR 124
Score = 35.8 bits (81), Expect(2) = 8e-11
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = +2
Query: 170 GAIELQFGCTEK*LADNFTKPLLEERFCMLRESLRIIA 283
G I L+F T+ LAD FTKPL EE+F +R L +I+
Sbjct: 130 GDITLEFISTKDQLADIFTKPLSEEQFVDIRRQLGVIS 167
>emb|CAE01974.2| OSJNBb0051N19.3 [Oryza sativa Japonica Group]
Length = 1414
Score = 58.9 bits (141), Expect(2) = 9e-11
Identities = 24/54 (44%), Positives = 34/54 (62%)
Frame = +3
Query: 3 LLWMIYQLSDYDLLFKPVKIYCDNFSVIYLTKNRVHHSSANHIYTKHHFIRHQI 164
+LW++ L DYDL F+ V ++CDN S I + KN V HS HI + HF+R +
Sbjct: 1316 ILWLLSTLKDYDLTFEKVPLFCDNTSAINIAKNPVQHSRTKHIDIRFHFLRDHV 1369
Score = 35.4 bits (80), Expect(2) = 9e-11
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = +2
Query: 170 GAIELQFGCTEK*LADNFTKPLLEERFCMLRESLRII 280
G +ELQF T+ +AD FTKPL RF LR L II
Sbjct: 1372 GDVELQFLDTKLQIADIFTKPLDSNRFAFLRGELGII 1408
>emb|CAN71189.1| hypothetical protein VITISV_005044 [Vitis vinifera]
Length = 334
Score = 58.2 bits (139), Expect(2) = 1e-10
Identities = 26/51 (50%), Positives = 34/51 (66%)
Frame = +3
Query: 3 LLWMIYQLSDYDLLFKPVKIYCDNFSVIYLTKNRVHHSSANHIYTKHHFIR 155
+LWM LSD++L F+ V I CDN S I ++KN V HS HI +HHF+R
Sbjct: 240 ILWMKQTLSDFNLSFEHVPIKCDNTSAINISKNPVQHSRTKHIEIRHHFLR 290
Score = 36.2 bits (82), Expect(2) = 1e-10
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = +2
Query: 170 GAIELQFGCTEK*LADNFTKPLLEERFCMLRESLRIIA 283
G I L+F T+ LAD FTKPL EE+F +R L +I+
Sbjct: 296 GDITLEFVSTKDQLADIFTKPLSEEQFSDIRRQLGVIS 333
>emb|CAN65058.1| hypothetical protein VITISV_008902 [Vitis vinifera]
Length = 857
Score = 58.5 bits (140), Expect(2) = 1e-10
Identities = 25/51 (49%), Positives = 35/51 (68%)
Frame = +3
Query: 3 LLWMIYQLSDYDLLFKPVKIYCDNFSVIYLTKNRVHHSSANHIYTKHHFIR 155
+LWM LSD++L+F+ V I CDN S I ++KN V HS H+ +HHF+R
Sbjct: 349 ILWMKQTLSDFNLIFEHVPIKCDNTSTINISKNPVQHSRTKHMEIRHHFLR 399
Score = 35.4 bits (80), Expect(2) = 1e-10
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
Frame = +2
Query: 170 GAIELQFGCTEK*LADNFTKPLLEERFCMLRESLRIIAQSV*HHIYFPYLT----IRVCG 337
G I L+F T+ LAD FTKPL EE+F +R L + + F +++ RVC
Sbjct: 405 GDITLEFVSTKDQLADIFTKPLNEEQFVDIRRQLGRLLSTPRFSGLFSFISRRLGFRVCA 464
Query: 338 LLKSFTQIVS-----TTFAQL 385
+ F I+ T+FA L
Sbjct: 465 CIFLFAFILCLDSFFTSFASL 485
>emb|CAN71808.1| hypothetical protein VITISV_011726 [Vitis vinifera]
Length = 553
Score = 60.8 bits (146), Expect(2) = 1e-10
Identities = 27/51 (52%), Positives = 35/51 (68%)
Frame = +3
Query: 3 LLWMIYQLSDYDLLFKPVKIYCDNFSVIYLTKNRVHHSSANHIYTKHHFIR 155
+LWM L+D+DL F+ V I CDN SVI ++KN V HS HI +HHF+R
Sbjct: 459 ILWMKQTLNDFDLYFEHVPIKCDNTSVISISKNPVQHSRTKHIEIRHHFLR 509
Score = 33.1 bits (74), Expect(2) = 1e-10
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +2
Query: 170 GAIELQFGCTEK*LADNFTKPLLEERFCMLRESLRIIA 283
G I L+F T+ AD FTK L EE+F +R L II+
Sbjct: 515 GDITLEFASTKDQFADIFTKTLSEEQFVDIRRQLGIIS 552
>emb|CAN83181.1| hypothetical protein VITISV_013310 [Vitis vinifera]
Length = 455
Score = 59.7 bits (143), Expect(2) = 1e-10
Identities = 26/51 (50%), Positives = 35/51 (68%)
Frame = +3
Query: 3 LLWMIYQLSDYDLLFKPVKIYCDNFSVIYLTKNRVHHSSANHIYTKHHFIR 155
+LWM LSD++L+F+ V I CDN S I ++KN V HS HI +HHF+R
Sbjct: 361 ILWMKQTLSDFNLIFEHVPIKCDNTSAINISKNLVQHSRTKHIEIRHHFLR 411
Score = 34.3 bits (77), Expect(2) = 1e-10
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +2
Query: 170 GAIELQFGCTEK*LADNFTKPLLEERFCMLRESLRII 280
G I L+F T+ L D FTKPL EE+F +R L +I
Sbjct: 417 GDITLEFVSTKDQLVDIFTKPLSEEQFVDIRRQLGVI 453
>emb|CAN68742.1| hypothetical protein VITISV_036839 [Vitis vinifera]
Length = 334
Score = 59.7 bits (143), Expect(2) = 1e-10
Identities = 26/51 (50%), Positives = 35/51 (68%)
Frame = +3
Query: 3 LLWMIYQLSDYDLLFKPVKIYCDNFSVIYLTKNRVHHSSANHIYTKHHFIR 155
+LWM LSD++L+F+ V I CDN S I ++KN V HS HI +HHF+R
Sbjct: 240 ILWMKQTLSDFNLIFEHVPIKCDNTSAINISKNPVQHSRTKHIEIRHHFLR 290
Score = 34.3 bits (77), Expect(2) = 1e-10
Identities = 18/38 (47%), Positives = 25/38 (65%)
Frame = +2
Query: 170 GAIELQFGCTEK*LADNFTKPLLEERFCMLRESLRIIA 283
G I L+F T+ LA+ FTKPL EE+F +R L +I+
Sbjct: 296 GNITLEFVSTKDQLANIFTKPLSEEQFVDIRRQLGVIS 333
>emb|CAN66543.1| hypothetical protein VITISV_036480 [Vitis vinifera]
Length = 328
Score = 58.2 bits (139), Expect(2) = 1e-10
Identities = 25/51 (49%), Positives = 35/51 (68%)
Frame = +3
Query: 3 LLWMIYQLSDYDLLFKPVKIYCDNFSVIYLTKNRVHHSSANHIYTKHHFIR 155
+LWM LSD++L+F+ V I CDN S I ++KN + HS HI +HHF+R
Sbjct: 234 ILWMKQTLSDFNLIFEYVPIKCDNTSAINISKNPMQHSRTKHIEIRHHFLR 284
Score = 35.8 bits (81), Expect(2) = 1e-10
Identities = 19/37 (51%), Positives = 24/37 (64%)
Frame = +2
Query: 170 GAIELQFGCTEK*LADNFTKPLLEERFCMLRESLRII 280
G I L+F T+ LAD FTKPL EE+F +R L +I
Sbjct: 290 GDITLEFVSTKDQLADIFTKPLSEEQFVDIRRQLGVI 326
>gb|AAM74419.1|AC123594_2 Putative retroelement [Oryza sativa Japonica Group]
Length = 1499
Score = 60.5 bits (145), Expect(2) = 2e-10
Identities = 23/54 (42%), Positives = 36/54 (66%)
Frame = +3
Query: 3 LLWMIYQLSDYDLLFKPVKIYCDNFSVIYLTKNRVHHSSANHIYTKHHFIRHQI 164
+LW+++ L DY L+F+ V ++CDN + I + KNRV HS HI + HF+R +
Sbjct: 1401 ILWLLFTLKDYGLIFEKVPLFCDNTNAINVAKNRVQHSRTKHIDIRFHFLRDHV 1454
Score = 33.1 bits (74), Expect(2) = 2e-10
Identities = 20/37 (54%), Positives = 22/37 (59%)
Frame = +2
Query: 170 GAIELQFGCTEK*LADNFTKPLLEERFCMLRESLRII 280
G +ELQF T+ LAD FTKPL RF L L II
Sbjct: 1457 GDVELQFLDTKLQLADIFTKPLDSNRFAFLCGELGII 1493
>gb|AAN05363.1| Putative retroelement [Oryza sativa Japonica Group]
Length = 1099
Score = 60.5 bits (145), Expect(2) = 2e-10
Identities = 23/54 (42%), Positives = 36/54 (66%)
Frame = +3
Query: 3 LLWMIYQLSDYDLLFKPVKIYCDNFSVIYLTKNRVHHSSANHIYTKHHFIRHQI 164
+LW+++ L DY L+F+ V ++CDN + I + KNRV HS HI + HF+R +
Sbjct: 1001 ILWLLFTLKDYGLIFEKVPLFCDNTNAINVAKNRVQHSRTKHIDIRFHFLRDHV 1054
Score = 33.1 bits (74), Expect(2) = 2e-10
Identities = 20/37 (54%), Positives = 22/37 (59%)
Frame = +2
Query: 170 GAIELQFGCTEK*LADNFTKPLLEERFCMLRESLRII 280
G +ELQF T+ LAD FTKPL RF L L II
Sbjct: 1057 GDVELQFLDTKLQLADIFTKPLDSNRFAFLCGELGII 1093