BLASTX nr result

ID: Atropa21_contig00037646 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00037646
         (969 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006358739.1| PREDICTED: kinesin-like protein cut7-like [S...    89   2e-15
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...    39   9e-09
ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665...    40   2e-06
gb|AAD26953.1| putative non-LTR retrolelement reverse transcript...    41   9e-06

>ref|XP_006358739.1| PREDICTED: kinesin-like protein cut7-like [Solanum tuberosum]
          Length = 904

 Score = 89.4 bits (220), Expect = 2e-15
 Identities = 37/64 (57%), Positives = 47/64 (73%)
 Frame = +3

Query: 72  GMKAEAAVAKHVCNVAQKADNLWVKRVNRVYIKVQNWWNCSLPADCCWYWRKRCNIKDKY 251
           G   EAAV K+V N+AQKADNLWV+ V+ VYIK  +WW  ++P D CWYW+K C I+DK+
Sbjct: 22  GSIPEAAVEKYVWNIAQKADNLWVRWVDHVYIKGTDWWQYAIPHDSCWYWKKICRIRDKF 81

Query: 252 EQGY 263
             GY
Sbjct: 82  APGY 85


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score = 38.5 bits (88), Expect(3) = 9e-09
 Identities = 19/48 (39%), Positives = 28/48 (58%)
 Frame = +3

Query: 84   EAAVAKHVCNVAQKADNLWVKRVNRVYIKVQNWWNCSLPADCCWYWRK 227
            +AA+ K +  +  K D LWV+ VN  YIK QN  N ++ ++  W  RK
Sbjct: 872  KAAILKLLWAITFKQDKLWVRWVNAYYIKRQNIENVTVSSNTSWILRK 919



 Score = 36.6 bits (83), Expect(3) = 9e-09
 Identities = 23/105 (21%), Positives = 43/105 (40%)
 Frame = +2

Query: 482  MCAGVVESIERLFFECQFSKICLDIILSWLGMRVQNTELHGLWRRMTRKKMGRNCRDFMT 661
            MC   +E+I+ LFF C +SK     +L +L ++ Q          + + +  ++      
Sbjct: 1004 MCGNEIETIQHLFFNCIYSKEIWGKVLLYLNLQPQADAQAKKELAIKKARSTKDRNKLYV 1063

Query: 662  AILVALVYNIWRARNETLWHSTVPLSRTVCEQIKEDLHIRANSKR 796
             +    VY IW  RN  ++           + I   + +R N K+
Sbjct: 1064 MMFTESVYAIWLLRNAKVFRGIEINQNQAVKSIIFRIAVRCNDKQ 1108



 Score = 31.2 bits (69), Expect(3) = 9e-09
 Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
 Frame = +1

Query: 298  YSIQSGYYWRKGDMKVWPGIRWMWTMVN---TSKHSFICWLGAHNRLLTRQRLQRIGVTA 468
            +SI+  Y   + D   +  + W   + N   T K  FI WL   NRL T +R+ R     
Sbjct: 942  FSIKKTYKLLQED---YENVVWKRLICNNKATPKSQFILWLAMLNRLATAERVSRWNRDV 998

Query: 469  DDTCDVC 489
               C +C
Sbjct: 999  SPLCKMC 1005


>ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665746 [Glycine max]
          Length = 506

 Score = 40.4 bits (93), Expect(2) = 2e-06
 Identities = 30/116 (25%), Positives = 56/116 (48%), Gaps = 1/116 (0%)
 Frame = +2

Query: 500 ESIERLFFECQFSKICLDIILSWLGMRVQNTELHGLWRRMTRKKMGRNCRDFMTAILVA- 676
           ES+  LFF C  SK     +L W+ +R   ++       +T    G+  R  +  + +A 
Sbjct: 392 ESMNHLFFVCDNSKRVWMEVLQWVQIRHDPSDWPNELHWLTHHTKGKGTRAAVLKMAIAE 451

Query: 677 LVYNIWRARNETLWHSTVPLSRTVCEQIKEDLHIRANSKRSWKDSKQGRKWIECIL 844
            +Y IW  RN  ++   + ++ TV ++I     I     R W ++K+ RK+I+ ++
Sbjct: 452 TIYEIWNIRNNKIFGQAIDIN-TVGKKI-----INTLVNRGW-NNKRLRKYIDILM 500



 Score = 38.5 bits (88), Expect(2) = 2e-06
 Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
 Frame = +1

Query: 301 SIQSGYYWRK----GDMKVWPGIRWMWTMVNTSKHSFICWLGAHNRLLTRQRLQRIGVTA 468
           SI  G  +RK    G  K W  +  ++      + +FI WL  H RL T+ RL + G+  
Sbjct: 324 SINMGKLYRKLQDCGQRKEWKNL--LYGNTARPRANFILWLACHGRLSTKDRLCKYGMID 381

Query: 469 DDTCDVC 489
           D +C  C
Sbjct: 382 DKSCCFC 388


>gb|AAD26953.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 323

 Score = 40.8 bits (94), Expect(2) = 9e-06
 Identities = 18/47 (38%), Positives = 25/47 (53%)
 Frame = +1

Query: 349 PGIRWMWTMVNTSKHSFICWLGAHNRLLTRQRLQRIGVTADDTCDVC 489
           P  + +W      KH+FICW+ A  RL TR RL + G+     C +C
Sbjct: 153 PWQKSVWFKDRIPKHAFICWVAAWKRLHTRDRLTQWGLNIPTVCVLC 199



 Score = 36.2 bits (82), Expect(2) = 9e-06
 Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 5/106 (4%)
 Frame = +2

Query: 479 VMCAGVVESIERLFFECQFSKICLDIILSWLGMRVQNTELHG---LWRRMTRKKMGRNCR 649
           V+C  V E+ + LFF+CQFS       +   GM   +  L G   LW  +      +N  
Sbjct: 197 VLCNVVDETHDHLFFQCQFSNEIWSFFMIRAGMTPPH--LFGPILLW--LKSASSSKNLS 252

Query: 650 DFMTAILVALVYNIWRARNETL--WHSTVPLSRTVCEQIKEDLHIR 781
             +  +  A VY IWR RN  +   HS  P   T+ +++++ +  R
Sbjct: 253 LIIKLLFQASVYLIWRERNCRIHTTHSRTP--PTIIKEVQQLIRAR 296


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