BLASTX nr result

ID: Atropa21_contig00037641 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00037641
         (791 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006360484.1| PREDICTED: myb-like protein H-like [Solanum ...    67   9e-24
ref|XP_002315454.1| hypothetical protein POPTR_0010s24130g [Popu...    42   2e-06

>ref|XP_006360484.1| PREDICTED: myb-like protein H-like [Solanum tuberosum]
          Length = 153

 Score = 67.0 bits (162), Expect(3) = 9e-24
 Identities = 36/60 (60%), Positives = 41/60 (68%), Gaps = 10/60 (16%)
 Frame = +3

Query: 261 GNNDIVSEN*HNGLKNKSI----------GNNGGRPRLNLRWMDLLLDPDPDNIMAVWLT 410
           GNN+  +EN  NGLKN             G+ GG+PRLNLRWMDLLLDPDPDNI+AV LT
Sbjct: 53  GNNN--TENQENGLKNNGSSNGNGSNDGNGDGGGKPRLNLRWMDLLLDPDPDNIVAVGLT 110



 Score = 53.1 bits (126), Expect(3) = 9e-24
 Identities = 29/54 (53%), Positives = 37/54 (68%)
 Frame = +1

Query: 94  MAVSIYISPLYSPLILQNPSITKPHFSKLLYCLLKSQPSMIWSKRTHFLVWATK 255
           MA+S+YISP YS  ILQNPSIT+ HFS   +  + +  S I  KR HFLV+A +
Sbjct: 1   MAISMYISPSYSLPILQNPSITRTHFS---FSPIHTPKSKICPKRKHFLVFAAE 51



 Score = 37.4 bits (85), Expect(3) = 9e-24
 Identities = 16/20 (80%), Positives = 19/20 (95%)
 Frame = +2

Query: 413 LLIWASVNILWQVFVIALAV 472
           LL WASV+ILWQ+FVIALA+
Sbjct: 112 LLTWASVSILWQLFVIALAI 131


>ref|XP_002315454.1| hypothetical protein POPTR_0010s24130g [Populus trichocarpa]
           gi|222864494|gb|EEF01625.1| hypothetical protein
           POPTR_0010s24130g [Populus trichocarpa]
          Length = 154

 Score = 42.4 bits (98), Expect(2) = 2e-06
 Identities = 22/45 (48%), Positives = 28/45 (62%), Gaps = 9/45 (20%)
 Frame = +3

Query: 303 KNKSIGNNGGR---------PRLNLRWMDLLLDPDPDNIMAVWLT 410
           KN S  N+GG          P  +++W DLLL+PDPDNI+AV LT
Sbjct: 67  KNGSSNNSGGGYDLKQDQPPPLFDIKWGDLLLNPDPDNILAVGLT 111



 Score = 36.2 bits (82), Expect(2) = 2e-06
 Identities = 15/20 (75%), Positives = 18/20 (90%)
 Frame = +2

Query: 413 LLIWASVNILWQVFVIALAV 472
           LL WASV +LWQ+FVIALA+
Sbjct: 113 LLSWASVQVLWQLFVIALAI 132


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