BLASTX nr result

ID: Atropa21_contig00037535 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00037535
         (505 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAW28568.1| Putative transposon MuDR mudrA-like protein, iden...    67   2e-15
ref|XP_006342321.1| PREDICTED: uncharacterized protein LOC102583...    59   4e-15
ref|XP_006360064.1| PREDICTED: uncharacterized protein LOC102591...    59   2e-14
ref|XP_006338917.1| PREDICTED: uncharacterized protein LOC102583...    69   5e-10

>gb|AAW28568.1| Putative transposon MuDR mudrA-like protein, identical [Solanum
           demissum]
          Length = 770

 Score = 67.0 bits (162), Expect(2) = 2e-15
 Identities = 38/62 (61%), Positives = 43/62 (69%), Gaps = 7/62 (11%)
 Frame = -2

Query: 240 QSGTTDG------LRSSIPTNIDPNYESHGLKWNGRAAVTQRQLQEQSYKRKNSST-STQ 82
           +SGTTD       L SS+PTNID  Y+ +GL+W G AA TQRQLQEQSYKR   ST STQ
Sbjct: 709 RSGTTDRVLHCAPLNSSMPTNIDLGYKPNGLRWKGGAAATQRQLQEQSYKRATQSTPSTQ 768

Query: 81  AT 76
            T
Sbjct: 769 DT 770



 Score = 40.8 bits (94), Expect(2) = 2e-15
 Identities = 20/44 (45%), Positives = 27/44 (61%)
 Frame = -3

Query: 440 RKASSIRNGEANPGYKRPPPTRYKSSRAAGYDLLFGPGGSVIER 309
           +K++ ++ G ANP YKRP        R  G+ +LFG  GSVIER
Sbjct: 674 KKSNKVKRGGANPEYKRP--------RTTGFGVLFGVNGSVIER 709


>ref|XP_006342321.1| PREDICTED: uncharacterized protein LOC102583809 [Solanum tuberosum]
          Length = 1081

 Score = 59.3 bits (142), Expect(2) = 4e-15
 Identities = 30/50 (60%), Positives = 36/50 (72%), Gaps = 6/50 (12%)
 Frame = -2

Query: 240  QSGTTDG------LRSSIPTNIDPNYESHGLKWNGRAAVTQRQLQEQSYK 109
            +SGTTD       L+SS+P NID  Y+ +GL+W G A VTQRQLQEQSYK
Sbjct: 1032 RSGTTDKVLHCAPLKSSVPINIDLGYKPNGLRWKGGAVVTQRQLQEQSYK 1081



 Score = 47.4 bits (111), Expect(2) = 4e-15
 Identities = 22/44 (50%), Positives = 30/44 (68%)
 Frame = -3

Query: 440  RKASSIRNGEANPGYKRPPPTRYKSSRAAGYDLLFGPGGSVIER 309
            +K+S ++ G ANPGYKRP   R +  R  G+ +LFG  GS+IER
Sbjct: 992  KKSSKVKRGGANPGYKRP---RTEKPRTTGFGVLFGANGSMIER 1032


>ref|XP_006360064.1| PREDICTED: uncharacterized protein LOC102591172 [Solanum tuberosum]
          Length = 1101

 Score = 58.5 bits (140), Expect(2) = 2e-14
 Identities = 29/61 (47%), Positives = 39/61 (63%), Gaps = 6/61 (9%)
 Frame = -2

Query: 240  QSGTTDG------LRSSIPTNIDPNYESHGLKWNGRAAVTQRQLQEQSYKRKNSSTSTQA 79
            +SG TD       L SS PTNID  Y+ +GL+W G  A+TQRQL+++SY+    + STQ 
Sbjct: 1037 RSGNTDRVLRSATLSSSTPTNIDLGYKPNGLRWKGTTAITQRQLRDESYRSTQGTPSTQG 1096

Query: 78   T 76
            T
Sbjct: 1097 T 1097



 Score = 45.8 bits (107), Expect(2) = 2e-14
 Identities = 24/48 (50%), Positives = 28/48 (58%)
 Frame = -3

Query: 452  GGPKRKASSIRNGEANPGYKRPPPTRYKSSRAAGYDLLFGPGGSVIER 309
            GG KRK S+   G A   YK+P P   K ++  GY LLFG GGSV  R
Sbjct: 993  GGQKRKTSTTLRGGATLAYKKPRP---KKAKTTGYGLLFGSGGSVTAR 1037


>ref|XP_006338917.1| PREDICTED: uncharacterized protein LOC102583012 [Solanum tuberosum]
          Length = 564

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 40/70 (57%), Positives = 46/70 (65%), Gaps = 7/70 (10%)
 Frame = -2

Query: 264 SLTQTFLFQSGTTDG------LRSSIPTNIDPNYESHGLKWNGRAAVTQRQLQEQSYKRK 103
           S   T +  S TTD       L+SS+PTNID  Y+ +GL+W G AAVTQRQLQEQSYKR 
Sbjct: 495 SAASTGVIASATTDKVLHCAPLKSSVPTNIDLGYKPNGLRWKGGAAVTQRQLQEQSYKRA 554

Query: 102 NSST-STQAT 76
             ST STQ T
Sbjct: 555 TQSTPSTQDT 564


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