BLASTX nr result
ID: Atropa21_contig00037420
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00037420
(835 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ20613.1| hypothetical protein PRUPE_ppa021915mg, partial [... 43 8e-07
emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabid... 42 1e-06
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas] 42 1e-06
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas] 41 2e-06
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas] 41 2e-06
>gb|EMJ20613.1| hypothetical protein PRUPE_ppa021915mg, partial [Prunus persica]
Length = 509
Score = 42.7 bits (99), Expect(2) = 8e-07
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Frame = +3
Query: 42 TTKAAYGLISGTDKP---SNKVNDLTW--LWRSNTMNKIKFFLWIVCLNRLPTASMLHKR 206
T+ Y + SG P S+ V+ W LW+ ++ KIKFF W + N + T L KR
Sbjct: 212 TSNGEYSVKSGIVGPPQTSHVVSTQVWKGLWKLKSLPKIKFFCWRILSNAIATKLNLFKR 271
Query: 207 KICPTDMC 230
KI + MC
Sbjct: 272 KISQSPMC 279
Score = 37.4 bits (85), Expect(2) = 8e-07
Identities = 26/112 (23%), Positives = 50/112 (44%), Gaps = 5/112 (4%)
Frame = +1
Query: 244 NEKEDIQHMFFRCTYLKSVC--DHLNLRVNCPHHNNDPNSIALWLKEQFS-SKEIVNDQL 414
N +E ++H+F C + +V LN RV HN + WL F + + D+
Sbjct: 284 NNEESVEHLFLLCPWTAAVWFGSPLNYRV----HNQSITTFDNWLNSMFQLNLTSILDRN 339
Query: 415 TWADLAPCLLWQIWNTRNAIIFKGNT--NLTIINQASKQLSKSSFINLT*ET 564
+ +LW+IW R + +G + +++QA + ++ N++ T
Sbjct: 340 RLMTIISFILWEIWKARCKFVIEGRQLHPIHVLHQAMRAANEFIEANVSQST 391
>emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabidopsis thaliana]
gi|7267666|emb|CAB78094.1| RNA-directed DNA
polymerase-like protein [Arabidopsis thaliana]
Length = 1274
Score = 42.0 bits (97), Expect(2) = 1e-06
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = +3
Query: 15 WNTIGHNKLTTKAAYGLISGTDKPSNKVNDLTW---LWRSNTMNKIKFFLWIVCLNRLPT 185
W + + TTK Y L P++++ D W +W+ +T K+K FLW LP
Sbjct: 939 WLPVKSGEYTTKTGYALAKLNSFPASQL-DFNWQKNIWKIHTSPKVKHFLWKAMKGALPV 997
Query: 186 ASMLHKRKICPTDMCK 233
L +R I CK
Sbjct: 998 GEALSRRNIEAEVTCK 1013
Score = 37.4 bits (85), Expect(2) = 1e-06
Identities = 24/85 (28%), Positives = 37/85 (43%)
Frame = +1
Query: 238 RSNEKEDIQHMFFRCTYLKSVCDHLNLRVNCPHHNNDPNSIALWLKEQFSSKEIVNDQLT 417
R + E H+ C Y K V + + N + +S+AL L + + L
Sbjct: 1014 RCGQTESSLHLMLLCPYAKKVWELAPVLFNPSEATH--SSVALLLVDAKRMVALPPTGLG 1071
Query: 418 WADLAPCLLWQIWNTRNAIIFKGNT 492
A L P LLW +W RN +IF ++
Sbjct: 1072 SAPLYPWLLWHLWKARNRLIFDNHS 1096
>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 41.6 bits (96), Expect(2) = 1e-06
Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 2/99 (2%)
Frame = +1
Query: 247 EKEDIQHMFFRCTYLKSVCDHLNLRVNCPHHNNDPNSIALWLKEQFSSKEIVNDQLTWAD 426
E E + H+F RC ++ D + N+ + W+K SS++ W+
Sbjct: 1084 EDETLDHLFRRCLLAEACWDSAVPPLTFQTSNH--LHMHSWMKAACSSQQKDGYSTNWSL 1141
Query: 427 LAPCLLWQIWNTRNAIIFKGNTNL--TIINQASKQLSKS 537
+ P +LW +W RN ++F N I+N++ + S++
Sbjct: 1142 IFPYILWNLWKARNRLVFDNNITAPSDILNRSFMESSEA 1180
Score = 37.7 bits (86), Expect(2) = 1e-06
Identities = 20/73 (27%), Positives = 31/73 (42%)
Frame = +3
Query: 12 NWNTIGHNKLTTKAAYGLISGTDKPSNKVNDLTWLWRSNTMNKIKFFLWIVCLNRLPTAS 191
+W +T +AY LI+G D + W+WR+ KIK F+W + N L
Sbjct: 1009 SWPHSTTGMVTVSSAYSLIAGHDGDDRSHD---WIWRATCTEKIKLFMWKIVKNGLMVNV 1065
Query: 192 MLHKRKICPTDMC 230
+R + C
Sbjct: 1066 ERKRRGLADAASC 1078
>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
Length = 1898
Score = 40.8 bits (94), Expect(2) = 2e-06
Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 2/99 (2%)
Frame = +1
Query: 247 EKEDIQHMFFRCTYLKSVCDHLNLRVNCPHHNNDPNSIALWLKEQFSSKEIVNDQLTWAD 426
E E + H+F RC ++ D + N+ + W+K SS++ W+
Sbjct: 1616 EDETLDHLFRRCLLAEACWDSAVPPLTFQTSNH--LHMHSWMKAACSSQQKDGYGTNWSL 1673
Query: 427 LAPCLLWQIWNTRNAIIFKGNTNL--TIINQASKQLSKS 537
+ P +LW +W RN ++F N I+N++ + S++
Sbjct: 1674 IFPYILWNLWKARNRLVFDNNITAPSDILNRSFMESSEA 1712
Score = 37.7 bits (86), Expect(2) = 2e-06
Identities = 20/73 (27%), Positives = 31/73 (42%)
Frame = +3
Query: 12 NWNTIGHNKLTTKAAYGLISGTDKPSNKVNDLTWLWRSNTMNKIKFFLWIVCLNRLPTAS 191
+W +T +AY LI+G D + W+WR+ KIK F+W + N L
Sbjct: 1541 SWPHSTTGMVTVSSAYSLIAGHDGDGRSHD---WIWRATCTEKIKLFMWKIVKNGLMVNV 1597
Query: 192 MLHKRKICPTDMC 230
+R + C
Sbjct: 1598 ERKRRGLADAASC 1610
>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 40.8 bits (94), Expect(2) = 2e-06
Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 2/99 (2%)
Frame = +1
Query: 247 EKEDIQHMFFRCTYLKSVCDHLNLRVNCPHHNNDPNSIALWLKEQFSSKEIVNDQLTWAD 426
E E + H+F RC ++ D + N+ + W+K SS++ W+
Sbjct: 1084 EDETLDHLFRRCLLAEACWDSAVPPLTFQTSNH--LHMHSWMKAACSSQQKDGYGTNWSL 1141
Query: 427 LAPCLLWQIWNTRNAIIFKGNTNL--TIINQASKQLSKS 537
+ P +LW +W RN ++F N I+N++ + S++
Sbjct: 1142 IFPYILWNLWKARNRLVFDNNITAPSDILNRSFMESSEA 1180
Score = 37.7 bits (86), Expect(2) = 2e-06
Identities = 20/73 (27%), Positives = 31/73 (42%)
Frame = +3
Query: 12 NWNTIGHNKLTTKAAYGLISGTDKPSNKVNDLTWLWRSNTMNKIKFFLWIVCLNRLPTAS 191
+W +T +AY LI+G D + W+WR+ KIK F+W + N L
Sbjct: 1009 SWPHSTTGMVTVSSAYSLIAGHDGDDRSHD---WIWRATCTEKIKLFMWKIVKNGLMVNV 1065
Query: 192 MLHKRKICPTDMC 230
+R + C
Sbjct: 1066 ERKRRGLADAASC 1078