BLASTX nr result
ID: Atropa21_contig00037358
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00037358
(693 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006354692.1| PREDICTED: regulation of nuclear pre-mRNA do... 100 4e-19
ref|XP_004237429.1| PREDICTED: regulation of nuclear pre-mRNA do... 96 1e-17
ref|XP_002306332.1| hypothetical protein POPTR_0005s08260g [Popu... 69 1e-09
ref|XP_006428118.1| hypothetical protein CICLE_v10027075mg [Citr... 69 2e-09
ref|XP_002528993.1| conserved hypothetical protein [Ricinus comm... 67 5e-09
ref|XP_002276726.1| PREDICTED: regulation of nuclear pre-mRNA do... 67 7e-09
ref|XP_006380451.1| hypothetical protein POPTR_0007s06070g [Popu... 64 3e-08
ref|XP_002309998.1| predicted protein [Populus trichocarpa] 64 3e-08
ref|XP_006580293.1| PREDICTED: regulation of nuclear pre-mRNA do... 62 2e-07
ref|XP_006580292.1| PREDICTED: regulation of nuclear pre-mRNA do... 62 2e-07
ref|XP_006580291.1| PREDICTED: regulation of nuclear pre-mRNA do... 62 2e-07
ref|XP_006580290.1| PREDICTED: regulation of nuclear pre-mRNA do... 62 2e-07
ref|XP_006585294.1| PREDICTED: regulation of nuclear pre-mRNA do... 62 2e-07
gb|EMJ09676.1| hypothetical protein PRUPE_ppa004178mg [Prunus pe... 61 4e-07
gb|EXB80860.1| hypothetical protein L484_020119 [Morus notabilis] 60 6e-07
ref|XP_004163496.1| PREDICTED: uncharacterized protein LOC101228... 59 1e-06
ref|XP_004149161.1| PREDICTED: uncharacterized protein LOC101213... 59 1e-06
>ref|XP_006354692.1| PREDICTED: regulation of nuclear pre-mRNA domain-containing protein
1B-like [Solanum tuberosum]
Length = 510
Score = 100 bits (249), Expect = 4e-19
Identities = 70/151 (46%), Positives = 76/151 (50%), Gaps = 17/151 (11%)
Frame = -3
Query: 691 AGLSKPSS---TNTSISKPEKSLSDSNVLMPLQQLLNHPQSNPYQSMLVPHPTVHGQMPN 521
AGL+KPSS TN+ IS+PE SLSDSN LM Q L N P SNPYQSML PHPTVH
Sbjct: 356 AGLAKPSSYLATNSYISQPENSLSDSNALMSAQ-LHNPPPSNPYQSMLAPHPTVH----- 409
Query: 520 TPGQYHS----TSQQYLQPSAGMVSHYG----------XXXXXXXXXXXXXXXXXXXXXX 383
GQYHS TSQQYLQPSAGM+S Y
Sbjct: 410 -QGQYHSLANPTSQQYLQPSAGMMSPYSYGSIAALPSVPPPPAPPSYMTMTQQPLSMMQQ 468
Query: 382 XXXXXXXXXXXXXXXXXPNFRPLTPIQPPGM 290
PNFRP+TP+QPPGM
Sbjct: 469 GVAQQQQAPLPQQPPPPPNFRPVTPVQPPGM 499
>ref|XP_004237429.1| PREDICTED: regulation of nuclear pre-mRNA domain-containing protein
2-like [Solanum lycopersicum]
Length = 513
Score = 95.9 bits (237), Expect = 1e-17
Identities = 68/154 (44%), Positives = 75/154 (48%), Gaps = 20/154 (12%)
Frame = -3
Query: 691 AGLSKPSS---TNTSISKPEKSLSDSNVLMPLQQLLNHPQSNPYQSMLVPHPTVHGQMPN 521
AGL+KPSS +N+ IS PE +LSDSN LM Q L N P SNPYQSML PHPTVH
Sbjct: 356 AGLAKPSSYLTSNSYISHPENTLSDSNALMSAQ-LPNPPPSNPYQSMLAPHPTVH----- 409
Query: 520 TPGQYHS----TSQQYLQPSAGMVSHYG-------------XXXXXXXXXXXXXXXXXXX 392
GQYHS TSQQYLQPSAGM+S Y
Sbjct: 410 -QGQYHSLANPTSQQYLQPSAGMMSPYSYGSIAALPSVPPPPPPPAPPSYMTMTQQPLSM 468
Query: 391 XXXXXXXXXXXXXXXXXXXXPNFRPLTPIQPPGM 290
PNFRP+TP+QPPGM
Sbjct: 469 MQQGAAAQQQQPPLPQQPPPPNFRPVTPVQPPGM 502
>ref|XP_002306332.1| hypothetical protein POPTR_0005s08260g [Populus trichocarpa]
gi|222855781|gb|EEE93328.1| hypothetical protein
POPTR_0005s08260g [Populus trichocarpa]
Length = 529
Score = 69.3 bits (168), Expect = 1e-09
Identities = 36/71 (50%), Positives = 49/71 (69%), Gaps = 2/71 (2%)
Frame = -3
Query: 658 SISKPEKSL--SDSNVLMPLQQLLNHPQSNPYQSMLVPHPTVHGQMPNTPGQYHSTSQQY 485
S+SKPE SL SDSNV MP Q L P ++ YQ +L+P PT+ Q P T Q++ +SQQY
Sbjct: 378 SLSKPENSLPVSDSNVFMPAQPLAA-PTTHSYQPVLLPQPTMPNQTPTTQAQFNPSSQQY 436
Query: 484 LQPSAGMVSHY 452
LQP+ G+++ Y
Sbjct: 437 LQPAGGIMTPY 447
>ref|XP_006428118.1| hypothetical protein CICLE_v10027075mg [Citrus clementina]
gi|568819514|ref|XP_006464295.1| PREDICTED: regulation
of nuclear pre-mRNA domain-containing protein 1B-like
[Citrus sinensis] gi|557530108|gb|ESR41358.1|
hypothetical protein CICLE_v10027075mg [Citrus
clementina]
Length = 525
Score = 68.6 bits (166), Expect = 2e-09
Identities = 38/81 (46%), Positives = 53/81 (65%), Gaps = 6/81 (7%)
Frame = -3
Query: 673 SSTNTSISKPEK--SLSDSNVLMPLQQLLNHPQSNPYQSMLVPHPTVHGQMPNTPGQYH- 503
+S SI KPEK ++SD N+ +P Q L + P + YQ++LVP PT+ Q +T QYH
Sbjct: 374 NSVTESIPKPEKQTAVSDPNMFLPAQSL-STPPNQSYQTVLVPQPTMQNQARSTQPQYHM 432
Query: 502 ---STSQQYLQPSAGMVSHYG 449
S+SQQYLQPS G+++ YG
Sbjct: 433 LPNSSSQQYLQPSGGIMTPYG 453
>ref|XP_002528993.1| conserved hypothetical protein [Ricinus communis]
gi|223531583|gb|EEF33412.1| conserved hypothetical
protein [Ricinus communis]
Length = 514
Score = 67.0 bits (162), Expect = 5e-09
Identities = 37/77 (48%), Positives = 49/77 (63%), Gaps = 6/77 (7%)
Frame = -3
Query: 661 TSISKPEKSL--SDSNVLMPLQQLLNHPQSNPYQSMLVPHPTVHGQMPNTPGQYH----S 500
T SKPEKSL SD NV MP Q L P ++ YQS+++ PT+ Q P++ QYH
Sbjct: 357 TKNSKPEKSLPISDPNVFMPAQSL-TAPSNHSYQSVMLAPPTMQNQAPSSQAQYHMLPNP 415
Query: 499 TSQQYLQPSAGMVSHYG 449
SQQY+QPS G+++ YG
Sbjct: 416 PSQQYMQPSGGIITPYG 432
>ref|XP_002276726.1| PREDICTED: regulation of nuclear pre-mRNA domain-containing protein
2-like [Vitis vinifera]
Length = 524
Score = 66.6 bits (161), Expect = 7e-09
Identities = 41/93 (44%), Positives = 54/93 (58%), Gaps = 12/93 (12%)
Frame = -3
Query: 691 AGLSKPSSTNTSI------SKPEKSL--SDSNVLMPLQQLLNHPQSNPYQSMLVPHPTVH 536
AGL+K S+ + S SKPE S+ SD NV M Q L P + PYQS+++ PT+
Sbjct: 355 AGLTKTSTVSNSFTPMPSNSKPENSMPVSDPNVFMSTQTL-TAPPNQPYQSVIIAPPTMQ 413
Query: 535 GQMPNTPGQYH----STSQQYLQPSAGMVSHYG 449
Q P + QYH SQQYLQPS G+++ YG
Sbjct: 414 SQTPTSQTQYHMLPNPPSQQYLQPSGGIMNPYG 446
>ref|XP_006380451.1| hypothetical protein POPTR_0007s06070g [Populus trichocarpa]
gi|550334241|gb|ERP58248.1| hypothetical protein
POPTR_0007s06070g [Populus trichocarpa]
Length = 200
Score = 64.3 bits (155), Expect = 3e-08
Identities = 35/75 (46%), Positives = 49/75 (65%), Gaps = 6/75 (8%)
Frame = -3
Query: 658 SISKPEKSL--SDSNVLMPLQQLLNHPQSNPYQSMLVPHPTVHGQMPNTPGQYH----ST 497
S+SKPE SL SD NV MP Q L P ++ YQS+L+P P++ Q P+ Q+H +
Sbjct: 26 SLSKPENSLPVSDPNVFMPAQPLAA-PTTHSYQSVLLPQPSMQNQTPSAQAQFHMLPNQS 84
Query: 496 SQQYLQPSAGMVSHY 452
SQQYLQP+ G+++ Y
Sbjct: 85 SQQYLQPAGGIMTPY 99
>ref|XP_002309998.1| predicted protein [Populus trichocarpa]
Length = 485
Score = 64.3 bits (155), Expect = 3e-08
Identities = 35/75 (46%), Positives = 49/75 (65%), Gaps = 6/75 (8%)
Frame = -3
Query: 658 SISKPEKSL--SDSNVLMPLQQLLNHPQSNPYQSMLVPHPTVHGQMPNTPGQYH----ST 497
S+SKPE SL SD NV MP Q L P ++ YQS+L+P P++ Q P+ Q+H +
Sbjct: 352 SLSKPENSLPVSDPNVFMPAQPLAA-PTTHSYQSVLLPQPSMQNQTPSAQAQFHMLPNQS 410
Query: 496 SQQYLQPSAGMVSHY 452
SQQYLQP+ G+++ Y
Sbjct: 411 SQQYLQPAGGIMTPY 425
>ref|XP_006580293.1| PREDICTED: regulation of nuclear pre-mRNA domain-containing protein
1B-like isoform X4 [Glycine max]
Length = 546
Score = 62.0 bits (149), Expect = 2e-07
Identities = 36/79 (45%), Positives = 51/79 (64%), Gaps = 6/79 (7%)
Frame = -3
Query: 667 TNTSISKPEKSL--SDSNVLMPLQQLLNHPQSNPYQSMLVPHPTVHGQMPNTPGQY---- 506
T+ ++SKPEKS+ SD NV M QQL+ P ++ Y S+LVP PT+ + GQY
Sbjct: 395 TSETMSKPEKSIPISDPNVFMTSQQLIATP-NHSYPSVLVPQPTLQNPAAASQGQYQMLC 453
Query: 505 HSTSQQYLQPSAGMVSHYG 449
+S+SQ YLQ + G++S YG
Sbjct: 454 NSSSQHYLQSTGGVISSYG 472
>ref|XP_006580292.1| PREDICTED: regulation of nuclear pre-mRNA domain-containing protein
1B-like isoform X3 [Glycine max]
Length = 559
Score = 62.0 bits (149), Expect = 2e-07
Identities = 36/79 (45%), Positives = 51/79 (64%), Gaps = 6/79 (7%)
Frame = -3
Query: 667 TNTSISKPEKSL--SDSNVLMPLQQLLNHPQSNPYQSMLVPHPTVHGQMPNTPGQY---- 506
T+ ++SKPEKS+ SD NV M QQL+ P ++ Y S+LVP PT+ + GQY
Sbjct: 358 TSETMSKPEKSIPISDPNVFMTSQQLIATP-NHSYPSVLVPQPTLQNPAAASQGQYQMLC 416
Query: 505 HSTSQQYLQPSAGMVSHYG 449
+S+SQ YLQ + G++S YG
Sbjct: 417 NSSSQHYLQSTGGVISSYG 435
>ref|XP_006580291.1| PREDICTED: regulation of nuclear pre-mRNA domain-containing protein
1B-like isoform X2 [Glycine max]
Length = 584
Score = 62.0 bits (149), Expect = 2e-07
Identities = 36/79 (45%), Positives = 51/79 (64%), Gaps = 6/79 (7%)
Frame = -3
Query: 667 TNTSISKPEKSL--SDSNVLMPLQQLLNHPQSNPYQSMLVPHPTVHGQMPNTPGQY---- 506
T+ ++SKPEKS+ SD NV M QQL+ P ++ Y S+LVP PT+ + GQY
Sbjct: 395 TSETMSKPEKSIPISDPNVFMTSQQLIATP-NHSYPSVLVPQPTLQNPAAASQGQYQMLC 453
Query: 505 HSTSQQYLQPSAGMVSHYG 449
+S+SQ YLQ + G++S YG
Sbjct: 454 NSSSQHYLQSTGGVISSYG 472
>ref|XP_006580290.1| PREDICTED: regulation of nuclear pre-mRNA domain-containing protein
1B-like isoform X1 [Glycine max]
Length = 596
Score = 62.0 bits (149), Expect = 2e-07
Identities = 36/79 (45%), Positives = 51/79 (64%), Gaps = 6/79 (7%)
Frame = -3
Query: 667 TNTSISKPEKSL--SDSNVLMPLQQLLNHPQSNPYQSMLVPHPTVHGQMPNTPGQY---- 506
T+ ++SKPEKS+ SD NV M QQL+ P ++ Y S+LVP PT+ + GQY
Sbjct: 395 TSETMSKPEKSIPISDPNVFMTSQQLIATP-NHSYPSVLVPQPTLQNPAAASQGQYQMLC 453
Query: 505 HSTSQQYLQPSAGMVSHYG 449
+S+SQ YLQ + G++S YG
Sbjct: 454 NSSSQHYLQSTGGVISSYG 472
>ref|XP_006585294.1| PREDICTED: regulation of nuclear pre-mRNA domain-containing protein
1B-like [Glycine max]
Length = 509
Score = 61.6 bits (148), Expect = 2e-07
Identities = 36/79 (45%), Positives = 51/79 (64%), Gaps = 6/79 (7%)
Frame = -3
Query: 667 TNTSISKPEKSL--SDSNVLMPLQQLLNHPQSNPYQSMLVPHPTVHGQMPNTPGQY---- 506
T+ S+SKPEKS+ SD NV + QQL+ P ++ Y S+LVP PT+ + GQY
Sbjct: 358 TSESMSKPEKSIPISDPNVFVSSQQLIATP-NHSYPSVLVPQPTLQNPAAASQGQYQMLC 416
Query: 505 HSTSQQYLQPSAGMVSHYG 449
+S+SQ YLQ + G++S YG
Sbjct: 417 NSSSQHYLQSTGGVISSYG 435
>gb|EMJ09676.1| hypothetical protein PRUPE_ppa004178mg [Prunus persica]
Length = 525
Score = 60.8 bits (146), Expect = 4e-07
Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 18/99 (18%)
Frame = -3
Query: 691 AGLSKPSSTNTS------------ISKPEKSL--SDSNVLMPLQQLLNHPQSNPYQSMLV 554
AGL+KPS+++ S +SKPE+S+ SD+NV + Q P ++ YQS LV
Sbjct: 356 AGLTKPSTSSNSFTSMPKSSGTDSMSKPERSIPVSDANVFISAQPPAV-PPNHSYQSALV 414
Query: 553 PHPTVHGQMPNTPGQYHST----SQQYLQPSAGMVSHYG 449
P P Q P + GQ+H SQQYLQP+ G++S YG
Sbjct: 415 PQP--QNQAPTSQGQFHMLPNPPSQQYLQPAGGVMSSYG 451
>gb|EXB80860.1| hypothetical protein L484_020119 [Morus notabilis]
Length = 524
Score = 60.1 bits (144), Expect = 6e-07
Identities = 39/89 (43%), Positives = 52/89 (58%), Gaps = 8/89 (8%)
Frame = -3
Query: 691 AGLSKPSSTNT--SISKPEKSLS--DSNVLMPLQQLLNHPQSNPYQSMLVPHPTVHGQMP 524
AGL+K S++ + S S PEKS+S D NV M Q L P S+ Y S+LVP P + Q P
Sbjct: 363 AGLTKTSASLSMDSDSIPEKSVSVSDPNVFMSTQSL-TAPPSHIYHSVLVPQPAMQNQAP 421
Query: 523 NTPGQYH----STSQQYLQPSAGMVSHYG 449
++ QYH SQ Y+QP G++ YG
Sbjct: 422 HSQAQYHMLSNPVSQTYMQPGGGVMPPYG 450
>ref|XP_004163496.1| PREDICTED: uncharacterized protein LOC101228422 [Cucumis sativus]
Length = 935
Score = 59.3 bits (142), Expect = 1e-06
Identities = 39/85 (45%), Positives = 52/85 (61%), Gaps = 7/85 (8%)
Frame = -3
Query: 682 SKPS-STNTSISKPEKSL--SDSNVLMPLQQLLNHPQSNPYQSMLVPHPTVHGQMPNTPG 512
SKP S+ SI+KPE S SD NV M +Q L P ++ YQS++VP PT+ Q N+
Sbjct: 774 SKPMRSSANSITKPEASAVGSDPNVFMSMQPLAA-PANHSYQSVMVPQPTMQSQASNSQT 832
Query: 511 QYH----STSQQYLQPSAGMVSHYG 449
QY + SQQYLQ S G+++ YG
Sbjct: 833 QYQMLPSAPSQQYLQLSNGVLTPYG 857
>ref|XP_004149161.1| PREDICTED: uncharacterized protein LOC101213308 [Cucumis sativus]
Length = 934
Score = 59.3 bits (142), Expect = 1e-06
Identities = 39/85 (45%), Positives = 52/85 (61%), Gaps = 7/85 (8%)
Frame = -3
Query: 682 SKPS-STNTSISKPEKSL--SDSNVLMPLQQLLNHPQSNPYQSMLVPHPTVHGQMPNTPG 512
SKP S+ SI+KPE S SD NV M +Q L P ++ YQS++VP PT+ Q N+
Sbjct: 773 SKPMRSSANSITKPEASAVGSDPNVFMSMQPLAA-PANHSYQSVMVPQPTMQSQASNSQT 831
Query: 511 QYH----STSQQYLQPSAGMVSHYG 449
QY + SQQYLQ S G+++ YG
Sbjct: 832 QYQMLPSAPSQQYLQLSNGVLTPYG 856