BLASTX nr result
ID: Atropa21_contig00037321
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00037321
(589 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004243109.1| PREDICTED: uncharacterized protein LOC101263... 91 2e-16
ref|XP_004253493.1| PREDICTED: uncharacterized protein LOC101265... 76 8e-12
ref|XP_004250589.1| PREDICTED: uncharacterized protein LOC101263... 74 2e-11
ref|XP_004228770.1| PREDICTED: uncharacterized protein LOC101246... 74 2e-11
gb|ADU56213.1| gag-pol polyprotein [Solanum lycopersicum] 73 5e-11
ref|XP_004248959.1| PREDICTED: uncharacterized protein LOC101266... 72 1e-10
emb|CAA73301.1| hypothetical protein [Zea mays] 71 2e-10
gb|ABI34339.1| Polyprotein, 3'-partial, putative [Solanum demissum] 70 3e-10
gb|AAT66771.2| Putative polyprotein, identical [Solanum demissum] 67 3e-09
ref|XP_006366121.1| PREDICTED: uncharacterized protein LOC102584... 64 3e-08
ref|XP_006347259.1| PREDICTED: uncharacterized protein LOC102584... 57 3e-06
gb|AAT39954.1| Putative integrase, identical [Solanum demissum] 56 6e-06
>ref|XP_004243109.1| PREDICTED: uncharacterized protein LOC101263429 [Solanum
lycopersicum]
Length = 413
Score = 90.9 bits (224), Expect = 2e-16
Identities = 45/87 (51%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Frame = +1
Query: 133 SDRGGSQIYRGGAQSG*SVHGG-THCYAFPNRPKVEAFDAVISGNIYVCHQPTMILFDPG 309
S RGGS RGG + G + GG +HCYAFP R + +A DAVI+G I +CH+P +LFD G
Sbjct: 313 SGRGGSPSGRGGGREGSQIDGGRSHCYAFPGRSEAKASDAVITGIIPICHRPATVLFDQG 372
Query: 310 STFSYVSTYHLVSYDWTCDHLDLSIHM 390
ST+SYV TY S D C+ DL I +
Sbjct: 373 STYSYVYTYFAPSLDILCESRDLPIRV 399
>ref|XP_004253493.1| PREDICTED: uncharacterized protein LOC101265119 [Solanum
lycopersicum]
Length = 518
Score = 75.9 bits (185), Expect = 8e-12
Identities = 44/93 (47%), Positives = 54/93 (58%), Gaps = 10/93 (10%)
Frame = +1
Query: 142 GGSQIYRGGAQSG*--SVHGG--------THCYAFPNRPKVEAFDAVISGNIYVCHQPTM 291
GG Q RG Q+G S HG HCYAFP R +VEA +AVI+GNI VC
Sbjct: 177 GGHQYGRGNGQTGATTSQHGRGNGQTNDRAHCYAFPGRSEVEASNAVITGNILVCDCMAS 236
Query: 292 ILFDPGSTFSYVSTYHLVSYDWTCDHLDLSIHM 390
+LFDPGSTFSYVS+ + C+ LD+ I +
Sbjct: 237 VLFDPGSTFSYVSSSFANGLNLHCELLDMPIRV 269
>ref|XP_004250589.1| PREDICTED: uncharacterized protein LOC101263780 [Solanum
lycopersicum]
Length = 508
Score = 74.3 bits (181), Expect = 2e-11
Identities = 39/88 (44%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Frame = +1
Query: 130 QSDRGGSQIYRGGAQSG*SVHGGT-HCYAFPNRPKVEAFDAVISGNIYVCHQPTMILFDP 306
Q RGG++ R G + G G H YA P R EA D VISG +++CHQP +LFDP
Sbjct: 193 QVTRGGARGGRSGGRPGAPGRGAQGHFYAAPTRAAAEASDDVISGTLFLCHQPATVLFDP 252
Query: 307 GSTFSYVSTYHLVSYDWTCDHLDLSIHM 390
GSTFSYVS Y + L+ +H+
Sbjct: 253 GSTFSYVSIYFAPRLGMRSESLEEPVHV 280
>ref|XP_004228770.1| PREDICTED: uncharacterized protein LOC101246080 [Solanum
lycopersicum]
Length = 282
Score = 74.3 bits (181), Expect = 2e-11
Identities = 39/85 (45%), Positives = 46/85 (54%)
Frame = +1
Query: 130 QSDRGGSQIYRGGAQSG*SVHGGTHCYAFPNRPKVEAFDAVISGNIYVCHQPTMILFDPG 309
Q G GGA+ G HCYAFP RP+ E DAVI G I + H P +LFD
Sbjct: 89 QQSGGKGTTQAGGARGG-------HCYAFPGRPEAETSDAVIKGIIPIYHPPVSLLFDLV 141
Query: 310 STFSYVSTYHLVSYDWTCDHLDLSI 384
STFSYVSTY +D CD + + I
Sbjct: 142 STFSYVSTYFPTEFDMICDSMTVPI 166
>gb|ADU56213.1| gag-pol polyprotein [Solanum lycopersicum]
Length = 329
Score = 73.2 bits (178), Expect = 5e-11
Identities = 42/93 (45%), Positives = 52/93 (55%), Gaps = 10/93 (10%)
Frame = +1
Query: 142 GGSQIYRGGAQSG*--SVHGG--------THCYAFPNRPKVEAFDAVISGNIYVCHQPTM 291
GG Q RG Q+G S HG HCYAFP R + E D VI+GN+ VC T
Sbjct: 105 GGHQNGRGDGQTGATTSQHGRGNEQTNERAHCYAFPGRSEAETSDTVITGNLLVCDCMTS 164
Query: 292 ILFDPGSTFSYVSTYHLVSYDWTCDHLDLSIHM 390
+LFDPGSTFSYVS+ + C+ LD+ I +
Sbjct: 165 VLFDPGSTFSYVSSSFANGLNLHCELLDMPIRV 197
>ref|XP_004248959.1| PREDICTED: uncharacterized protein LOC101266468 [Solanum
lycopersicum]
Length = 927
Score = 72.0 bits (175), Expect = 1e-10
Identities = 40/96 (41%), Positives = 53/96 (55%), Gaps = 9/96 (9%)
Frame = +1
Query: 130 QSDRGGSQIYRGGAQSG*SVHGGT---------HCYAFPNRPKVEAFDAVISGNIYVCHQ 282
Q R Q+ RGGA+ G S+ G + H YA P R EA D VISG +++C+Q
Sbjct: 483 QDHRESRQVTRGGARGG-SLGGRSGAPGKGAQGHFYAAPTRAAAEASDDVISGTLFLCYQ 541
Query: 283 PTMILFDPGSTFSYVSTYHLVSYDWTCDHLDLSIHM 390
P +LFDPGSTFSYVS Y + L+ +H+
Sbjct: 542 PATVLFDPGSTFSYVSIYFAPRLGMRSESLEEPVHV 577
>emb|CAA73301.1| hypothetical protein [Zea mays]
Length = 132
Score = 70.9 bits (172), Expect = 2e-10
Identities = 41/93 (44%), Positives = 52/93 (55%), Gaps = 10/93 (10%)
Frame = +1
Query: 142 GGSQIYRGGAQSG*--SVHGG--------THCYAFPNRPKVEAFDAVISGNIYVCHQPTM 291
GG Q RG Q+G S HG HCYAFP R + EA DAVI+GN+ VC
Sbjct: 9 GGHQNGRGNGQTGATTSQHGRGNGQTNDRAHCYAFPGRSEAEASDAVITGNLLVCDCMAS 68
Query: 292 ILFDPGSTFSYVSTYHLVSYDWTCDHLDLSIHM 390
+LFDP STFSY+S+ + C+ LD+ I +
Sbjct: 69 VLFDPRSTFSYISSSFDNGLNLHCEFLDMPIRV 101
>gb|ABI34339.1| Polyprotein, 3'-partial, putative [Solanum demissum]
Length = 1475
Score = 70.5 bits (171), Expect = 3e-10
Identities = 40/80 (50%), Positives = 47/80 (58%), Gaps = 10/80 (12%)
Frame = +1
Query: 130 QSDRGGSQIYRGGAQSG*SVHGG----------THCYAFPNRPKVEAFDAVISGNIYVCH 279
Q RGG Q RGG + G S GG +H YA P R + EA D VI+G I +C
Sbjct: 439 QDRRGGQQGIRGGPRGGRS--GGRSDGQGRGRHSHFYAAPARAEAEASDDVITGTILLCQ 496
Query: 280 QPTMILFDPGSTFSYVSTYH 339
QP + LFDPGSTFSYVS Y+
Sbjct: 497 QPALALFDPGSTFSYVSVYY 516
>gb|AAT66771.2| Putative polyprotein, identical [Solanum demissum]
Length = 1771
Score = 67.4 bits (163), Expect = 3e-09
Identities = 39/76 (51%), Positives = 44/76 (57%), Gaps = 4/76 (5%)
Frame = +1
Query: 121 DVYQSDRGGSQIYRGGAQSG*SVHGGT----HCYAFPNRPKVEAFDAVISGNIYVCHQPT 288
D Q RGG+ RGG SG S G H YA P R EA D VI+G + +CHQP
Sbjct: 607 DSRQGTRGGA---RGGRLSGRSDASGRGAQGHFYAAPARATAEASDDVITGMLLLCHQPA 663
Query: 289 MILFDPGSTFSYVSTY 336
+LFDPGSTFSYV Y
Sbjct: 664 TVLFDPGSTFSYVFVY 679
>ref|XP_006366121.1| PREDICTED: uncharacterized protein LOC102584602 [Solanum tuberosum]
Length = 1113
Score = 63.9 bits (154), Expect = 3e-08
Identities = 33/72 (45%), Positives = 41/72 (56%)
Frame = +1
Query: 175 SG*SVHGGTHCYAFPNRPKVEAFDAVISGNIYVCHQPTMILFDPGSTFSYVSTYHLVSYD 354
SG V G H YA P R EA D V++G + +CHQP +LFDPGSTFSYVS Y
Sbjct: 511 SGRCVQG--HFYAAPTRATAEASDDVLTGTLLLCHQPATVLFDPGSTFSYVSIYFAPRLG 568
Query: 355 WTCDHLDLSIHM 390
+ L +H+
Sbjct: 569 MRSESLAEPVHV 580
>ref|XP_006347259.1| PREDICTED: uncharacterized protein LOC102584611 [Solanum tuberosum]
Length = 1107
Score = 57.4 bits (137), Expect = 3e-06
Identities = 27/58 (46%), Positives = 35/58 (60%)
Frame = +1
Query: 217 PNRPKVEAFDAVISGNIYVCHQPTMILFDPGSTFSYVSTYHLVSYDWTCDHLDLSIHM 390
P R EA D VI+G + +CHQP +LFDPGSTFSYVS Y + + L +H+
Sbjct: 34 PARVTAEASDDVITGTLLLCHQPATVLFDPGSTFSYVSFYFVPRLGMRSESLAEPVHV 91
>gb|AAT39954.1| Putative integrase, identical [Solanum demissum]
Length = 1609
Score = 56.2 bits (134), Expect = 6e-06
Identities = 25/46 (54%), Positives = 32/46 (69%)
Frame = +1
Query: 202 HCYAFPNRPKVEAFDAVISGNIYVCHQPTMILFDPGSTFSYVSTYH 339
H +A P R + EA D VI+ I +C +P + LFDPGSTFSYVS Y+
Sbjct: 560 HFFAAPTRTEAEASDDVITCTILLCQKPALALFDPGSTFSYVSVYY 605