BLASTX nr result
ID: Atropa21_contig00036265
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atropa21_contig00036265 (920 letters) Database: nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006356601.1| PREDICTED: cleavage stimulation factor subun... 158 3e-36 ref|XP_006356598.1| PREDICTED: cleavage stimulation factor subun... 158 3e-36 ref|XP_004248746.1| PREDICTED: cleavage stimulation factor subun... 153 1e-34 ref|XP_004248745.1| PREDICTED: cleavage stimulation factor subun... 153 1e-34 gb|EOY19418.1| Tetratricopeptide repeat (TPR)-like superfamily p... 100 8e-19 gb|EOY19416.1| Tetratricopeptide repeat-like superfamily protein... 100 8e-19 ref|XP_002303484.1| suppressor of forked family protein [Populus... 100 8e-19 ref|XP_002265193.1| PREDICTED: cleavage stimulation factor subun... 99 2e-18 ref|XP_002519397.1| plant RNA cleavage stimulation factor, putat... 92 3e-16 gb|EOY19419.1| Tetratricopeptide repeat-like superfamily protein... 91 6e-16 gb|EOY19417.1| Tetratricopeptide repeat-like superfamily protein... 91 6e-16 ref|XP_004165274.1| PREDICTED: LOW QUALITY PROTEIN: cleavage sti... 89 2e-15 ref|XP_004144686.1| PREDICTED: cleavage stimulation factor subun... 89 2e-15 gb|EXB59942.1| Cleavage stimulation factor subunit 3 [Morus nota... 84 1e-13 ref|XP_004489637.1| PREDICTED: LOW QUALITY PROTEIN: cleavage sti... 81 5e-13 ref|XP_003618920.1| mRNA 3'-end-processing protein rna14 [Medica... 80 1e-12 gb|ESW23484.1| hypothetical protein PHAVU_004G051000g [Phaseolus... 79 3e-12 gb|EMJ28185.1| hypothetical protein PRUPE_ppa002118mg [Prunus pe... 79 3e-12 ref|XP_006604052.1| PREDICTED: cleavage stimulation factor subun... 74 6e-11 ref|XP_004300057.1| PREDICTED: cleavage stimulation factor subun... 74 1e-10 >ref|XP_006356601.1| PREDICTED: cleavage stimulation factor subunit 3-like isoform X4 [Solanum tuberosum] Length = 601 Score = 158 bits (399), Expect = 3e-36 Identities = 79/88 (89%), Positives = 82/88 (93%) Frame = +3 Query: 3 CLQSNIPSATGKSGTASLPLQSGPAPSTSDLSDSSKFRSRDRQPGKRKDMDRQEDEVSMT 182 CLQSNIP+ATGKSGTASLPLQSG APSTSDLSDSSKFR RDRQPGKRKDMDRQED+ S T Sbjct: 492 CLQSNIPAATGKSGTASLPLQSGAAPSTSDLSDSSKFRPRDRQPGKRKDMDRQEDDESTT 551 Query: 183 AQSQPLPRDVFKIRQLQKTRVGNSSRVT 266 QSQPLPRD+FKIRQLQK RVGNSSRVT Sbjct: 552 IQSQPLPRDLFKIRQLQKNRVGNSSRVT 579 >ref|XP_006356598.1| PREDICTED: cleavage stimulation factor subunit 3-like isoform X1 [Solanum tuberosum] gi|565380421|ref|XP_006356599.1| PREDICTED: cleavage stimulation factor subunit 3-like isoform X2 [Solanum tuberosum] gi|565380423|ref|XP_006356600.1| PREDICTED: cleavage stimulation factor subunit 3-like isoform X3 [Solanum tuberosum] Length = 741 Score = 158 bits (399), Expect = 3e-36 Identities = 79/88 (89%), Positives = 82/88 (93%) Frame = +3 Query: 3 CLQSNIPSATGKSGTASLPLQSGPAPSTSDLSDSSKFRSRDRQPGKRKDMDRQEDEVSMT 182 CLQSNIP+ATGKSGTASLPLQSG APSTSDLSDSSKFR RDRQPGKRKDMDRQED+ S T Sbjct: 632 CLQSNIPAATGKSGTASLPLQSGAAPSTSDLSDSSKFRPRDRQPGKRKDMDRQEDDESTT 691 Query: 183 AQSQPLPRDVFKIRQLQKTRVGNSSRVT 266 QSQPLPRD+FKIRQLQK RVGNSSRVT Sbjct: 692 IQSQPLPRDLFKIRQLQKNRVGNSSRVT 719 >ref|XP_004248746.1| PREDICTED: cleavage stimulation factor subunit 3-like isoform 2 [Solanum lycopersicum] Length = 734 Score = 153 bits (386), Expect = 1e-34 Identities = 77/88 (87%), Positives = 80/88 (90%) Frame = +3 Query: 3 CLQSNIPSATGKSGTASLPLQSGPAPSTSDLSDSSKFRSRDRQPGKRKDMDRQEDEVSMT 182 CLQSNIP+ATGKSGTASLPL SG APSTSDLSDSSKFR RDRQPGKRKDMDR ED+ S T Sbjct: 625 CLQSNIPAATGKSGTASLPLLSGAAPSTSDLSDSSKFRPRDRQPGKRKDMDRPEDDESTT 684 Query: 183 AQSQPLPRDVFKIRQLQKTRVGNSSRVT 266 QSQPLPRD+FKIRQLQK RVGNSSRVT Sbjct: 685 MQSQPLPRDLFKIRQLQKNRVGNSSRVT 712 >ref|XP_004248745.1| PREDICTED: cleavage stimulation factor subunit 3-like isoform 1 [Solanum lycopersicum] Length = 741 Score = 153 bits (386), Expect = 1e-34 Identities = 77/88 (87%), Positives = 80/88 (90%) Frame = +3 Query: 3 CLQSNIPSATGKSGTASLPLQSGPAPSTSDLSDSSKFRSRDRQPGKRKDMDRQEDEVSMT 182 CLQSNIP+ATGKSGTASLPL SG APSTSDLSDSSKFR RDRQPGKRKDMDR ED+ S T Sbjct: 632 CLQSNIPAATGKSGTASLPLLSGAAPSTSDLSDSSKFRPRDRQPGKRKDMDRPEDDESTT 691 Query: 183 AQSQPLPRDVFKIRQLQKTRVGNSSRVT 266 QSQPLPRD+FKIRQLQK RVGNSSRVT Sbjct: 692 MQSQPLPRDLFKIRQLQKNRVGNSSRVT 719 >gb|EOY19418.1| Tetratricopeptide repeat (TPR)-like superfamily protein isoform 3 [Theobroma cacao] Length = 755 Score = 100 bits (249), Expect = 8e-19 Identities = 57/97 (58%), Positives = 70/97 (72%), Gaps = 11/97 (11%) Frame = +3 Query: 3 CLQSNIPSATGKSGTASLPLQ--SGPAPSTSDLSDSSK---------FRSRDRQPGKRKD 149 CLQS++P+ K TA LP Q +GPAPSTSDLS SSK FR RDR GKRKD Sbjct: 641 CLQSDLPTGQTKKLTA-LPSQRTTGPAPSTSDLSGSSKSHPIPSSSSFRPRDRHLGKRKD 699 Query: 150 MDRQEDEVSMTAQSQPLPRDVFKIRQLQKTRVGNSSR 260 +DRQE++ + T QSQPLPRDVF+IRQ+QK R G++S+ Sbjct: 700 LDRQEEDETTTVQSQPLPRDVFRIRQIQKARGGSASQ 736 >gb|EOY19416.1| Tetratricopeptide repeat-like superfamily protein isoform 1 [Theobroma cacao] Length = 761 Score = 100 bits (249), Expect = 8e-19 Identities = 57/97 (58%), Positives = 70/97 (72%), Gaps = 11/97 (11%) Frame = +3 Query: 3 CLQSNIPSATGKSGTASLPLQ--SGPAPSTSDLSDSSK---------FRSRDRQPGKRKD 149 CLQS++P+ K TA LP Q +GPAPSTSDLS SSK FR RDR GKRKD Sbjct: 647 CLQSDLPTGQTKKLTA-LPSQRTTGPAPSTSDLSGSSKSHPIPSSSSFRPRDRHLGKRKD 705 Query: 150 MDRQEDEVSMTAQSQPLPRDVFKIRQLQKTRVGNSSR 260 +DRQE++ + T QSQPLPRDVF+IRQ+QK R G++S+ Sbjct: 706 LDRQEEDETTTVQSQPLPRDVFRIRQIQKARGGSASQ 742 >ref|XP_002303484.1| suppressor of forked family protein [Populus trichocarpa] gi|222840916|gb|EEE78463.1| suppressor of forked family protein [Populus trichocarpa] Length = 769 Score = 100 bits (249), Expect = 8e-19 Identities = 55/98 (56%), Positives = 69/98 (70%), Gaps = 10/98 (10%) Frame = +3 Query: 3 CLQSNIP-SATGKSGTASLPLQSGPAPSTSDLSDSSK---------FRSRDRQPGKRKDM 152 CLQS++P TGKSGT P+ SGPA TSDLS SS+ F++RDRQ GKRKD Sbjct: 656 CLQSDVPVGKTGKSGTTQTPMLSGPA--TSDLSGSSRSRPVPSGSSFKTRDRQSGKRKDR 713 Query: 153 DRQEDEVSMTAQSQPLPRDVFKIRQLQKTRVGNSSRVT 266 DRQE++ + T QSQPLPRDVF+IRQ+QK+R ++ T Sbjct: 714 DRQEEDETATVQSQPLPRDVFRIRQIQKSRAAATTSQT 751 >ref|XP_002265193.1| PREDICTED: cleavage stimulation factor subunit 3 [Vitis vinifera] gi|297736046|emb|CBI24084.3| unnamed protein product [Vitis vinifera] Length = 769 Score = 99.4 bits (246), Expect = 2e-18 Identities = 56/96 (58%), Positives = 68/96 (70%), Gaps = 10/96 (10%) Frame = +3 Query: 3 CLQSNIPSATGKSGTASLPLQSGPAPSTSDLSDSSKFRS----------RDRQPGKRKDM 152 CLQSN+ +TG++G S L +GP PSTSDLS SSK RDRQPGKRKD+ Sbjct: 658 CLQSNV--STGQTGL-STQLAAGPVPSTSDLSGSSKSHPVPSGSSFKPMRDRQPGKRKDL 714 Query: 153 DRQEDEVSMTAQSQPLPRDVFKIRQLQKTRVGNSSR 260 DRQED+ + TAQS PLPRDVFKIRQ++K R G +S+ Sbjct: 715 DRQEDDETATAQSLPLPRDVFKIRQIRKARGGTTSQ 750 >ref|XP_002519397.1| plant RNA cleavage stimulation factor, putative [Ricinus communis] gi|223541464|gb|EEF43014.1| plant RNA cleavage stimulation factor, putative [Ricinus communis] Length = 767 Score = 92.0 bits (227), Expect = 3e-16 Identities = 52/92 (56%), Positives = 66/92 (71%), Gaps = 6/92 (6%) Frame = +3 Query: 3 CLQSNIPSAT-GKSGTASLPLQSGPAPSTSDLSDSSKFR-----SRDRQPGKRKDMDRQE 164 CLQS + + GK GT S + + PAP+TSDLS SSK R SRDRQ GKRKD++RQE Sbjct: 658 CLQSELTNGQMGKLGT-SPAVPAPPAPATSDLSGSSKSRPVLKPSRDRQSGKRKDIERQE 716 Query: 165 DEVSMTAQSQPLPRDVFKIRQLQKTRVGNSSR 260 ++ + T QSQPLPRD+F+IR QK RVG +S+ Sbjct: 717 EDETATVQSQPLPRDIFRIRHSQKARVGTASQ 748 >gb|EOY19419.1| Tetratricopeptide repeat-like superfamily protein isoform 4 [Theobroma cacao] Length = 657 Score = 90.9 bits (224), Expect = 6e-16 Identities = 56/105 (53%), Positives = 69/105 (65%), Gaps = 19/105 (18%) Frame = +3 Query: 3 CLQSNIPSATGKSGTASLPLQ--SGPAPSTSDLSDSSK---------FRSRDRQPGKRKD 149 CLQS++P+ K TA LP Q +GPAPSTSDLS SSK FR RDR GKRKD Sbjct: 535 CLQSDLPTGQTKKLTA-LPSQRTTGPAPSTSDLSGSSKSHPIPSSSSFRPRDRHLGKRKD 593 Query: 150 MDR--------QEDEVSMTAQSQPLPRDVFKIRQLQKTRVGNSSR 260 +D QE++ + T QSQPLPRDVF+IRQ+QK R G++S+ Sbjct: 594 LDSKFPAVFMGQEEDETTTVQSQPLPRDVFRIRQIQKARGGSASQ 638 >gb|EOY19417.1| Tetratricopeptide repeat-like superfamily protein isoform 2 [Theobroma cacao] Length = 717 Score = 90.9 bits (224), Expect = 6e-16 Identities = 56/105 (53%), Positives = 69/105 (65%), Gaps = 19/105 (18%) Frame = +3 Query: 3 CLQSNIPSATGKSGTASLPLQ--SGPAPSTSDLSDSSK---------FRSRDRQPGKRKD 149 CLQS++P+ K TA LP Q +GPAPSTSDLS SSK FR RDR GKRKD Sbjct: 595 CLQSDLPTGQTKKLTA-LPSQRTTGPAPSTSDLSGSSKSHPIPSSSSFRPRDRHLGKRKD 653 Query: 150 MDR--------QEDEVSMTAQSQPLPRDVFKIRQLQKTRVGNSSR 260 +D QE++ + T QSQPLPRDVF+IRQ+QK R G++S+ Sbjct: 654 LDSKFPAVFMGQEEDETTTVQSQPLPRDVFRIRQIQKARGGSASQ 698 >ref|XP_004165274.1| PREDICTED: LOW QUALITY PROTEIN: cleavage stimulation factor subunit 3-like [Cucumis sativus] Length = 460 Score = 89.4 bits (220), Expect = 2e-15 Identities = 48/96 (50%), Positives = 61/96 (63%), Gaps = 10/96 (10%) Frame = +3 Query: 3 CLQSNIPSAT-GKSGTASLPLQSGPAPSTSDLSDSSKFRS---------RDRQPGKRKDM 152 CL+S++P+ KSG + GP P+TSDLS SSK + RD+Q GKRKD Sbjct: 346 CLESDLPTVPLVKSGATPAQVSGGPVPTTSDLSGSSKSHAFSNSSLKHTRDKQSGKRKDY 405 Query: 153 DRQEDEVSMTAQSQPLPRDVFKIRQLQKTRVGNSSR 260 DRQED S T QSQP+P+D F+IRQ+QK R SS+ Sbjct: 406 DRQEDNESTTVQSQPMPKDXFRIRQIQKARGATSSQ 441 >ref|XP_004144686.1| PREDICTED: cleavage stimulation factor subunit 3-like [Cucumis sativus] Length = 871 Score = 89.4 bits (220), Expect = 2e-15 Identities = 48/96 (50%), Positives = 61/96 (63%), Gaps = 10/96 (10%) Frame = +3 Query: 3 CLQSNIPSAT-GKSGTASLPLQSGPAPSTSDLSDSSKFRS---------RDRQPGKRKDM 152 CL+S++P+ KSG + GP P+TSDLS SSK + RD+Q GKRKD Sbjct: 757 CLESDLPTVPLVKSGATPAQVSGGPVPTTSDLSGSSKSHAFSNSSLKHTRDKQSGKRKDY 816 Query: 153 DRQEDEVSMTAQSQPLPRDVFKIRQLQKTRVGNSSR 260 DRQED S T QSQP+P+D F+IRQ+QK R SS+ Sbjct: 817 DRQEDNESTTVQSQPMPKDFFRIRQIQKARGATSSQ 852 >gb|EXB59942.1| Cleavage stimulation factor subunit 3 [Morus notabilis] Length = 782 Score = 83.6 bits (205), Expect = 1e-13 Identities = 49/91 (53%), Positives = 62/91 (68%), Gaps = 11/91 (12%) Frame = +3 Query: 3 CLQSNIPSATG---KSGTASLPLQSGPAPSTSDLSDSSK------FRSRDRQPGKRKDMD 155 CLQS++P+A KSGTA++ L+SG AP+TSDLS S+K S GKRKD+D Sbjct: 668 CLQSDLPAAPAGNVKSGTATMQLRSGAAPTTSDLSGSTKPHPVPSASSFKPNRGKRKDVD 727 Query: 156 RQED--EVSMTAQSQPLPRDVFKIRQLQKTR 242 RQ+D + + T QSQPLPRD F+IRQ QK R Sbjct: 728 RQDDYDDDTRTVQSQPLPRDAFRIRQFQKAR 758 >ref|XP_004489637.1| PREDICTED: LOW QUALITY PROTEIN: cleavage stimulation factor subunit 3-like [Cicer arietinum] Length = 755 Score = 81.3 bits (199), Expect = 5e-13 Identities = 47/98 (47%), Positives = 61/98 (62%), Gaps = 12/98 (12%) Frame = +3 Query: 3 CLQSNIPSATGKSGTASLPLQSGPAPSTSDLSDSSKFRSRD------------RQPGKRK 146 CLQS++P GK+G S AP+TS+LS SSK S +Q GKRK Sbjct: 640 CLQSDLPIG-GKTGIPSQLPVGAAAPATSELSGSSKSHSHPVQTGLSHKPTNRQQYGKRK 698 Query: 147 DMDRQEDEVSMTAQSQPLPRDVFKIRQLQKTRVGNSSR 260 ++DRQED+ + T QSQPLPRD F+IRQ QK R G++S+ Sbjct: 699 ELDRQEDDDTTTVQSQPLPRDAFRIRQYQKARAGSTSQ 736 >ref|XP_003618920.1| mRNA 3'-end-processing protein rna14 [Medicago truncatula] gi|355493935|gb|AES75138.1| mRNA 3'-end-processing protein rna14 [Medicago truncatula] Length = 737 Score = 79.7 bits (195), Expect = 1e-12 Identities = 45/98 (45%), Positives = 64/98 (65%), Gaps = 12/98 (12%) Frame = +3 Query: 3 CLQSNIPSATGKSGTASLPLQ--SGPAPSTSDLSDSSK----------FRSRDRQPGKRK 146 CLQS++P TG+S +P Q +GPAP+TS+LS SSK + +Q GKRK Sbjct: 623 CLQSDLP--TGQSVKVGIPSQLPAGPAPATSELSGSSKSHPVQSGLSHMQPGRKQYGKRK 680 Query: 147 DMDRQEDEVSMTAQSQPLPRDVFKIRQLQKTRVGNSSR 260 +D QE++ + + QSQPLP+D F+IRQ QK R G++S+ Sbjct: 681 QLDSQEEDDTKSVQSQPLPQDAFRIRQFQKARAGSTSQ 718 >gb|ESW23484.1| hypothetical protein PHAVU_004G051000g [Phaseolus vulgaris] Length = 738 Score = 78.6 bits (192), Expect = 3e-12 Identities = 48/108 (44%), Positives = 63/108 (58%), Gaps = 22/108 (20%) Frame = +3 Query: 3 CLQSNIPSA------------TGKSGTASLPLQSGPAPSTSDLSDSSKFR---------- 116 CLQS++P+ TGK G S L +G AP+TS+LS SSK Sbjct: 613 CLQSDLPTGQSAKIGISTQVQTGKGGIPS-QLPAGSAPATSELSGSSKSHPVPSGVSLKP 671 Query: 117 SRDRQPGKRKDMDRQEDEVSMTAQSQPLPRDVFKIRQLQKTRVGNSSR 260 +RQ GKRK+ +RQED+ + T QSQPLPRD F+IRQ QK R ++S+ Sbjct: 672 GSNRQYGKRKESERQEDDDTTTVQSQPLPRDAFRIRQYQKARASSASQ 719 >gb|EMJ28185.1| hypothetical protein PRUPE_ppa002118mg [Prunus persica] Length = 714 Score = 78.6 bits (192), Expect = 3e-12 Identities = 48/87 (55%), Positives = 57/87 (65%), Gaps = 7/87 (8%) Frame = +3 Query: 3 CLQSNIPSAT-GKSGTASLPLQSGPAPSTSDLSDSSKFR------SRDRQPGKRKDMDRQ 161 CLQS++P+ GKSG A + L S PAPSTSDLS SSK S GKRK DRQ Sbjct: 605 CLQSDVPAPQPGKSGAAPMQLPSIPAPSTSDLSVSSKSHPIPSASSFKPARGKRKHFDRQ 664 Query: 162 EDEVSMTAQSQPLPRDVFKIRQLQKTR 242 E+E + + QS PLPRD F+IRQ+QK R Sbjct: 665 EEEEA-SVQSHPLPRDAFRIRQIQKAR 690 >ref|XP_006604052.1| PREDICTED: cleavage stimulation factor subunit 3-like [Glycine max] Length = 739 Score = 74.3 bits (181), Expect = 6e-11 Identities = 46/110 (41%), Positives = 63/110 (57%), Gaps = 24/110 (21%) Frame = +3 Query: 3 CLQSNIPSA------------TGKSGT-ASLPLQSGPAPSTSDLSDSSKFR--------- 116 CLQS++P+ +GK+G A LP S PA + S+LS SSK Sbjct: 611 CLQSDLPTGQSVKTGIPTQVQSGKAGIPALLPAGSAPAAAASELSGSSKSHPAPSGGVSL 670 Query: 117 --SRDRQPGKRKDMDRQEDEVSMTAQSQPLPRDVFKIRQLQKTRVGNSSR 260 +RQ GKRK+ DRQ+++ + T QSQPLPRD F+IRQ QK R ++S+ Sbjct: 671 KPGSNRQYGKRKEPDRQDEDDTTTVQSQPLPRDAFRIRQYQKARASSASQ 720 >ref|XP_004300057.1| PREDICTED: cleavage stimulation factor subunit 3-like [Fragaria vesca subsp. vesca] Length = 762 Score = 73.6 bits (179), Expect = 1e-10 Identities = 49/94 (52%), Positives = 61/94 (64%), Gaps = 8/94 (8%) Frame = +3 Query: 3 CLQSNIPSATG-KSGTASLPLQSGPAPSTSDLSDSSKFR------SRDRQPGKRKDMDRQ 161 CLQS+IP+ KSGTA + S PAPSTSDLS SSK S GKRK++DR+ Sbjct: 647 CLQSDIPAPQPVKSGTAHVQFPSVPAPSTSDLSVSSKSHPIPSGSSFKPTRGKRKNIDRK 706 Query: 162 EDEVSMTAQSQPLPRDVFKIRQLQK-TRVGNSSR 260 DE T QSQPLP D F+IRQ+Q+ +R ++SR Sbjct: 707 -DEDETTVQSQPLPTDAFRIRQIQRASRSASASR 739