BLASTX nr result
ID: Atropa21_contig00036262
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atropa21_contig00036262 (880 letters) Database: nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006356601.1| PREDICTED: cleavage stimulation factor subun... 151 3e-34 ref|XP_006356598.1| PREDICTED: cleavage stimulation factor subun... 151 3e-34 ref|XP_004248746.1| PREDICTED: cleavage stimulation factor subun... 145 2e-32 ref|XP_004248745.1| PREDICTED: cleavage stimulation factor subun... 145 2e-32 gb|EOY19418.1| Tetratricopeptide repeat (TPR)-like superfamily p... 96 2e-17 gb|EOY19416.1| Tetratricopeptide repeat-like superfamily protein... 96 2e-17 ref|XP_002303484.1| suppressor of forked family protein [Populus... 96 2e-17 ref|XP_002265193.1| PREDICTED: cleavage stimulation factor subun... 92 2e-16 ref|XP_002519397.1| plant RNA cleavage stimulation factor, putat... 92 3e-16 ref|XP_004165274.1| PREDICTED: LOW QUALITY PROTEIN: cleavage sti... 88 5e-15 ref|XP_004144686.1| PREDICTED: cleavage stimulation factor subun... 88 5e-15 gb|EOY19419.1| Tetratricopeptide repeat-like superfamily protein... 86 1e-14 gb|EOY19417.1| Tetratricopeptide repeat-like superfamily protein... 86 1e-14 gb|ESW23484.1| hypothetical protein PHAVU_004G051000g [Phaseolus... 80 1e-12 gb|EXB59942.1| Cleavage stimulation factor subunit 3 [Morus nota... 79 2e-12 ref|XP_004489637.1| PREDICTED: LOW QUALITY PROTEIN: cleavage sti... 79 3e-12 ref|XP_006604052.1| PREDICTED: cleavage stimulation factor subun... 75 4e-11 ref|XP_003618920.1| mRNA 3'-end-processing protein rna14 [Medica... 74 5e-11 gb|EMJ28185.1| hypothetical protein PRUPE_ppa002118mg [Prunus pe... 71 6e-10 ref|XP_004300057.1| PREDICTED: cleavage stimulation factor subun... 70 1e-09 >ref|XP_006356601.1| PREDICTED: cleavage stimulation factor subunit 3-like isoform X4 [Solanum tuberosum] Length = 601 Score = 151 bits (382), Expect = 3e-34 Identities = 76/82 (92%), Positives = 78/82 (95%) Frame = -2 Query: 879 PSATGKSGTASLPLQSGPAPSTSDLSDSSKFRSRDRQPGKRKDMGRQEDDESTTIQSQPL 700 P+ATGKSGTASLPLQSG APSTSDLSDSSKFR RDRQPGKRKDM RQEDDESTTIQSQPL Sbjct: 498 PAATGKSGTASLPLQSGAAPSTSDLSDSSKFRPRDRQPGKRKDMDRQEDDESTTIQSQPL 557 Query: 699 PRDVFKIRQLQKTRVGNSSRVT 634 PRD+FKIRQLQK RVGNSSRVT Sbjct: 558 PRDLFKIRQLQKNRVGNSSRVT 579 >ref|XP_006356598.1| PREDICTED: cleavage stimulation factor subunit 3-like isoform X1 [Solanum tuberosum] gi|565380421|ref|XP_006356599.1| PREDICTED: cleavage stimulation factor subunit 3-like isoform X2 [Solanum tuberosum] gi|565380423|ref|XP_006356600.1| PREDICTED: cleavage stimulation factor subunit 3-like isoform X3 [Solanum tuberosum] Length = 741 Score = 151 bits (382), Expect = 3e-34 Identities = 76/82 (92%), Positives = 78/82 (95%) Frame = -2 Query: 879 PSATGKSGTASLPLQSGPAPSTSDLSDSSKFRSRDRQPGKRKDMGRQEDDESTTIQSQPL 700 P+ATGKSGTASLPLQSG APSTSDLSDSSKFR RDRQPGKRKDM RQEDDESTTIQSQPL Sbjct: 638 PAATGKSGTASLPLQSGAAPSTSDLSDSSKFRPRDRQPGKRKDMDRQEDDESTTIQSQPL 697 Query: 699 PRDVFKIRQLQKTRVGNSSRVT 634 PRD+FKIRQLQK RVGNSSRVT Sbjct: 698 PRDLFKIRQLQKNRVGNSSRVT 719 >ref|XP_004248746.1| PREDICTED: cleavage stimulation factor subunit 3-like isoform 2 [Solanum lycopersicum] Length = 734 Score = 145 bits (366), Expect = 2e-32 Identities = 73/82 (89%), Positives = 76/82 (92%) Frame = -2 Query: 879 PSATGKSGTASLPLQSGPAPSTSDLSDSSKFRSRDRQPGKRKDMGRQEDDESTTIQSQPL 700 P+ATGKSGTASLPL SG APSTSDLSDSSKFR RDRQPGKRKDM R EDDESTT+QSQPL Sbjct: 631 PAATGKSGTASLPLLSGAAPSTSDLSDSSKFRPRDRQPGKRKDMDRPEDDESTTMQSQPL 690 Query: 699 PRDVFKIRQLQKTRVGNSSRVT 634 PRD+FKIRQLQK RVGNSSRVT Sbjct: 691 PRDLFKIRQLQKNRVGNSSRVT 712 >ref|XP_004248745.1| PREDICTED: cleavage stimulation factor subunit 3-like isoform 1 [Solanum lycopersicum] Length = 741 Score = 145 bits (366), Expect = 2e-32 Identities = 73/82 (89%), Positives = 76/82 (92%) Frame = -2 Query: 879 PSATGKSGTASLPLQSGPAPSTSDLSDSSKFRSRDRQPGKRKDMGRQEDDESTTIQSQPL 700 P+ATGKSGTASLPL SG APSTSDLSDSSKFR RDRQPGKRKDM R EDDESTT+QSQPL Sbjct: 638 PAATGKSGTASLPLLSGAAPSTSDLSDSSKFRPRDRQPGKRKDMDRPEDDESTTMQSQPL 697 Query: 699 PRDVFKIRQLQKTRVGNSSRVT 634 PRD+FKIRQLQK RVGNSSRVT Sbjct: 698 PRDLFKIRQLQKNRVGNSSRVT 719 >gb|EOY19418.1| Tetratricopeptide repeat (TPR)-like superfamily protein isoform 3 [Theobroma cacao] Length = 755 Score = 95.9 bits (237), Expect = 2e-17 Identities = 55/91 (60%), Positives = 66/91 (72%), Gaps = 11/91 (12%) Frame = -2 Query: 879 PSATGKSGTASLPLQ--SGPAPSTSDLSDSSK---------FRSRDRQPGKRKDMGRQED 733 P+ K TA LP Q +GPAPSTSDLS SSK FR RDR GKRKD+ RQE+ Sbjct: 647 PTGQTKKLTA-LPSQRTTGPAPSTSDLSGSSKSHPIPSSSSFRPRDRHLGKRKDLDRQEE 705 Query: 732 DESTTIQSQPLPRDVFKIRQLQKTRVGNSSR 640 DE+TT+QSQPLPRDVF+IRQ+QK R G++S+ Sbjct: 706 DETTTVQSQPLPRDVFRIRQIQKARGGSASQ 736 >gb|EOY19416.1| Tetratricopeptide repeat-like superfamily protein isoform 1 [Theobroma cacao] Length = 761 Score = 95.9 bits (237), Expect = 2e-17 Identities = 55/91 (60%), Positives = 66/91 (72%), Gaps = 11/91 (12%) Frame = -2 Query: 879 PSATGKSGTASLPLQ--SGPAPSTSDLSDSSK---------FRSRDRQPGKRKDMGRQED 733 P+ K TA LP Q +GPAPSTSDLS SSK FR RDR GKRKD+ RQE+ Sbjct: 653 PTGQTKKLTA-LPSQRTTGPAPSTSDLSGSSKSHPIPSSSSFRPRDRHLGKRKDLDRQEE 711 Query: 732 DESTTIQSQPLPRDVFKIRQLQKTRVGNSSR 640 DE+TT+QSQPLPRDVF+IRQ+QK R G++S+ Sbjct: 712 DETTTVQSQPLPRDVFRIRQIQKARGGSASQ 742 >ref|XP_002303484.1| suppressor of forked family protein [Populus trichocarpa] gi|222840916|gb|EEE78463.1| suppressor of forked family protein [Populus trichocarpa] Length = 769 Score = 95.9 bits (237), Expect = 2e-17 Identities = 51/88 (57%), Positives = 63/88 (71%), Gaps = 9/88 (10%) Frame = -2 Query: 870 TGKSGTASLPLQSGPAPSTSDLSDSSK---------FRSRDRQPGKRKDMGRQEDDESTT 718 TGKSGT P+ SGPA TSDLS SS+ F++RDRQ GKRKD RQE+DE+ T Sbjct: 666 TGKSGTTQTPMLSGPA--TSDLSGSSRSRPVPSGSSFKTRDRQSGKRKDRDRQEEDETAT 723 Query: 717 IQSQPLPRDVFKIRQLQKTRVGNSSRVT 634 +QSQPLPRDVF+IRQ+QK+R ++ T Sbjct: 724 VQSQPLPRDVFRIRQIQKSRAAATTSQT 751 >ref|XP_002265193.1| PREDICTED: cleavage stimulation factor subunit 3 [Vitis vinifera] gi|297736046|emb|CBI24084.3| unnamed protein product [Vitis vinifera] Length = 769 Score = 92.4 bits (228), Expect = 2e-16 Identities = 51/88 (57%), Positives = 61/88 (69%), Gaps = 10/88 (11%) Frame = -2 Query: 873 ATGKSGTASLPLQSGPAPSTSDLSDSSKFRS----------RDRQPGKRKDMGRQEDDES 724 +TG++G S L +GP PSTSDLS SSK RDRQPGKRKD+ RQEDDE+ Sbjct: 664 STGQTGL-STQLAAGPVPSTSDLSGSSKSHPVPSGSSFKPMRDRQPGKRKDLDRQEDDET 722 Query: 723 TTIQSQPLPRDVFKIRQLQKTRVGNSSR 640 T QS PLPRDVFKIRQ++K R G +S+ Sbjct: 723 ATAQSLPLPRDVFKIRQIRKARGGTTSQ 750 >ref|XP_002519397.1| plant RNA cleavage stimulation factor, putative [Ricinus communis] gi|223541464|gb|EEF43014.1| plant RNA cleavage stimulation factor, putative [Ricinus communis] Length = 767 Score = 92.0 bits (227), Expect = 3e-16 Identities = 50/81 (61%), Positives = 61/81 (75%), Gaps = 5/81 (6%) Frame = -2 Query: 867 GKSGTASLPLQSGPAPSTSDLSDSSKFR-----SRDRQPGKRKDMGRQEDDESTTIQSQP 703 GK GT S + + PAP+TSDLS SSK R SRDRQ GKRKD+ RQE+DE+ T+QSQP Sbjct: 669 GKLGT-SPAVPAPPAPATSDLSGSSKSRPVLKPSRDRQSGKRKDIERQEEDETATVQSQP 727 Query: 702 LPRDVFKIRQLQKTRVGNSSR 640 LPRD+F+IR QK RVG +S+ Sbjct: 728 LPRDIFRIRHSQKARVGTASQ 748 >ref|XP_004165274.1| PREDICTED: LOW QUALITY PROTEIN: cleavage stimulation factor subunit 3-like [Cucumis sativus] Length = 460 Score = 87.8 bits (216), Expect = 5e-15 Identities = 45/84 (53%), Positives = 56/84 (66%), Gaps = 9/84 (10%) Frame = -2 Query: 864 KSGTASLPLQSGPAPSTSDLSDSSKFRS---------RDRQPGKRKDMGRQEDDESTTIQ 712 KSG + GP P+TSDLS SSK + RD+Q GKRKD RQED+ESTT+Q Sbjct: 358 KSGATPAQVSGGPVPTTSDLSGSSKSHAFSNSSLKHTRDKQSGKRKDYDRQEDNESTTVQ 417 Query: 711 SQPLPRDVFKIRQLQKTRVGNSSR 640 SQP+P+D F+IRQ+QK R SS+ Sbjct: 418 SQPMPKDXFRIRQIQKARGATSSQ 441 >ref|XP_004144686.1| PREDICTED: cleavage stimulation factor subunit 3-like [Cucumis sativus] Length = 871 Score = 87.8 bits (216), Expect = 5e-15 Identities = 45/84 (53%), Positives = 56/84 (66%), Gaps = 9/84 (10%) Frame = -2 Query: 864 KSGTASLPLQSGPAPSTSDLSDSSKFRS---------RDRQPGKRKDMGRQEDDESTTIQ 712 KSG + GP P+TSDLS SSK + RD+Q GKRKD RQED+ESTT+Q Sbjct: 769 KSGATPAQVSGGPVPTTSDLSGSSKSHAFSNSSLKHTRDKQSGKRKDYDRQEDNESTTVQ 828 Query: 711 SQPLPRDVFKIRQLQKTRVGNSSR 640 SQP+P+D F+IRQ+QK R SS+ Sbjct: 829 SQPMPKDFFRIRQIQKARGATSSQ 852 >gb|EOY19419.1| Tetratricopeptide repeat-like superfamily protein isoform 4 [Theobroma cacao] Length = 657 Score = 86.3 bits (212), Expect = 1e-14 Identities = 54/99 (54%), Positives = 65/99 (65%), Gaps = 19/99 (19%) Frame = -2 Query: 879 PSATGKSGTASLPLQ--SGPAPSTSDLSDSSK---------FRSRDRQPGKRKDMGR--- 742 P+ K TA LP Q +GPAPSTSDLS SSK FR RDR GKRKD+ Sbjct: 541 PTGQTKKLTA-LPSQRTTGPAPSTSDLSGSSKSHPIPSSSSFRPRDRHLGKRKDLDSKFP 599 Query: 741 -----QEDDESTTIQSQPLPRDVFKIRQLQKTRVGNSSR 640 QE+DE+TT+QSQPLPRDVF+IRQ+QK R G++S+ Sbjct: 600 AVFMGQEEDETTTVQSQPLPRDVFRIRQIQKARGGSASQ 638 >gb|EOY19417.1| Tetratricopeptide repeat-like superfamily protein isoform 2 [Theobroma cacao] Length = 717 Score = 86.3 bits (212), Expect = 1e-14 Identities = 54/99 (54%), Positives = 65/99 (65%), Gaps = 19/99 (19%) Frame = -2 Query: 879 PSATGKSGTASLPLQ--SGPAPSTSDLSDSSK---------FRSRDRQPGKRKDMGR--- 742 P+ K TA LP Q +GPAPSTSDLS SSK FR RDR GKRKD+ Sbjct: 601 PTGQTKKLTA-LPSQRTTGPAPSTSDLSGSSKSHPIPSSSSFRPRDRHLGKRKDLDSKFP 659 Query: 741 -----QEDDESTTIQSQPLPRDVFKIRQLQKTRVGNSSR 640 QE+DE+TT+QSQPLPRDVF+IRQ+QK R G++S+ Sbjct: 660 AVFMGQEEDETTTVQSQPLPRDVFRIRQIQKARGGSASQ 698 >gb|ESW23484.1| hypothetical protein PHAVU_004G051000g [Phaseolus vulgaris] Length = 738 Score = 80.1 bits (196), Expect = 1e-12 Identities = 45/87 (51%), Positives = 57/87 (65%), Gaps = 10/87 (11%) Frame = -2 Query: 870 TGKSGTASLPLQSGPAPSTSDLSDSSKFR----------SRDRQPGKRKDMGRQEDDEST 721 TGK G S L +G AP+TS+LS SSK +RQ GKRK+ RQEDD++T Sbjct: 634 TGKGGIPS-QLPAGSAPATSELSGSSKSHPVPSGVSLKPGSNRQYGKRKESERQEDDDTT 692 Query: 720 TIQSQPLPRDVFKIRQLQKTRVGNSSR 640 T+QSQPLPRD F+IRQ QK R ++S+ Sbjct: 693 TVQSQPLPRDAFRIRQYQKARASSASQ 719 >gb|EXB59942.1| Cleavage stimulation factor subunit 3 [Morus notabilis] Length = 782 Score = 79.0 bits (193), Expect = 2e-12 Identities = 44/82 (53%), Positives = 56/82 (68%), Gaps = 8/82 (9%) Frame = -2 Query: 879 PSATGKSGTASLPLQSGPAPSTSDLSDSSK------FRSRDRQPGKRKDMGRQED--DES 724 P+ KSGTA++ L+SG AP+TSDLS S+K S GKRKD+ RQ+D D++ Sbjct: 677 PAGNVKSGTATMQLRSGAAPTTSDLSGSTKPHPVPSASSFKPNRGKRKDVDRQDDYDDDT 736 Query: 723 TTIQSQPLPRDVFKIRQLQKTR 658 T+QSQPLPRD F+IRQ QK R Sbjct: 737 RTVQSQPLPRDAFRIRQFQKAR 758 >ref|XP_004489637.1| PREDICTED: LOW QUALITY PROTEIN: cleavage stimulation factor subunit 3-like [Cicer arietinum] Length = 755 Score = 78.6 bits (192), Expect = 3e-12 Identities = 43/88 (48%), Positives = 56/88 (63%), Gaps = 12/88 (13%) Frame = -2 Query: 867 GKSGTASLPLQSGPAPSTSDLSDSSKFRSRD------------RQPGKRKDMGRQEDDES 724 GK+G S AP+TS+LS SSK S +Q GKRK++ RQEDD++ Sbjct: 649 GKTGIPSQLPVGAAAPATSELSGSSKSHSHPVQTGLSHKPTNRQQYGKRKELDRQEDDDT 708 Query: 723 TTIQSQPLPRDVFKIRQLQKTRVGNSSR 640 TT+QSQPLPRD F+IRQ QK R G++S+ Sbjct: 709 TTVQSQPLPRDAFRIRQYQKARAGSTSQ 736 >ref|XP_006604052.1| PREDICTED: cleavage stimulation factor subunit 3-like [Glycine max] Length = 739 Score = 74.7 bits (182), Expect = 4e-11 Identities = 42/89 (47%), Positives = 57/89 (64%), Gaps = 12/89 (13%) Frame = -2 Query: 870 TGKSGT-ASLPLQSGPAPSTSDLSDSSKFR-----------SRDRQPGKRKDMGRQEDDE 727 +GK+G A LP S PA + S+LS SSK +RQ GKRK+ RQ++D+ Sbjct: 632 SGKAGIPALLPAGSAPAAAASELSGSSKSHPAPSGGVSLKPGSNRQYGKRKEPDRQDEDD 691 Query: 726 STTIQSQPLPRDVFKIRQLQKTRVGNSSR 640 +TT+QSQPLPRD F+IRQ QK R ++S+ Sbjct: 692 TTTVQSQPLPRDAFRIRQYQKARASSASQ 720 >ref|XP_003618920.1| mRNA 3'-end-processing protein rna14 [Medicago truncatula] gi|355493935|gb|AES75138.1| mRNA 3'-end-processing protein rna14 [Medicago truncatula] Length = 737 Score = 74.3 bits (181), Expect = 5e-11 Identities = 40/89 (44%), Positives = 58/89 (65%), Gaps = 12/89 (13%) Frame = -2 Query: 870 TGKSGTASLPLQ--SGPAPSTSDLSDSSK----------FRSRDRQPGKRKDMGRQEDDE 727 TG+S +P Q +GPAP+TS+LS SSK + +Q GKRK + QE+D+ Sbjct: 630 TGQSVKVGIPSQLPAGPAPATSELSGSSKSHPVQSGLSHMQPGRKQYGKRKQLDSQEEDD 689 Query: 726 STTIQSQPLPRDVFKIRQLQKTRVGNSSR 640 + ++QSQPLP+D F+IRQ QK R G++S+ Sbjct: 690 TKSVQSQPLPQDAFRIRQFQKARAGSTSQ 718 >gb|EMJ28185.1| hypothetical protein PRUPE_ppa002118mg [Prunus persica] Length = 714 Score = 70.9 bits (172), Expect = 6e-10 Identities = 42/76 (55%), Positives = 50/76 (65%), Gaps = 6/76 (7%) Frame = -2 Query: 867 GKSGTASLPLQSGPAPSTSDLSDSSKFR------SRDRQPGKRKDMGRQEDDESTTIQSQ 706 GKSG A + L S PAPSTSDLS SSK S GKRK RQE++E++ +QS Sbjct: 616 GKSGAAPMQLPSIPAPSTSDLSVSSKSHPIPSASSFKPARGKRKHFDRQEEEEAS-VQSH 674 Query: 705 PLPRDVFKIRQLQKTR 658 PLPRD F+IRQ+QK R Sbjct: 675 PLPRDAFRIRQIQKAR 690 >ref|XP_004300057.1| PREDICTED: cleavage stimulation factor subunit 3-like [Fragaria vesca subsp. vesca] Length = 762 Score = 69.7 bits (169), Expect = 1e-09 Identities = 43/82 (52%), Positives = 56/82 (68%), Gaps = 7/82 (8%) Frame = -2 Query: 864 KSGTASLPLQSGPAPSTSDLSDSSKFR------SRDRQPGKRKDMGRQEDDESTTIQSQP 703 KSGTA + S PAPSTSDLS SSK S GKRK++ R+++DE TT+QSQP Sbjct: 659 KSGTAHVQFPSVPAPSTSDLSVSSKSHPIPSGSSFKPTRGKRKNIDRKDEDE-TTVQSQP 717 Query: 702 LPRDVFKIRQLQK-TRVGNSSR 640 LP D F+IRQ+Q+ +R ++SR Sbjct: 718 LPTDAFRIRQIQRASRSASASR 739