BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00036226
         (463 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT38724.1| Putative retrotransposon protein, identical [Sola...    58   2e-07
gb|AAT38744.1| Putative gag-pol polyprotein, identical [Solanum ...    58   2e-07
gb|ABI34354.1| Retrotransposon gag protein [Solanum demissum]          57   3e-06
gb|EOY17291.1| Uncharacterized protein TCM_036439 [Theobroma cacao]    52   6e-06

>gb|AAT38724.1| Putative retrotransposon protein, identical [Solanum demissum]
          Length = 1602

 Score = 58.2 bits (139), Expect(2) = 2e-07
 Identities = 33/94 (35%), Positives = 50/94 (53%)
 Frame = +1

Query: 4    STKMTPFEILCGPSYKPPISWYVVGKNRIASARLSP*GC*KS*INSGTFENG*KPQ*SYA 183
            S +M P+E L G   + PI W+ VG+ R+    L      K  +     +     Q SY 
Sbjct: 1388 SIQMAPYEALYGRRCRSPIGWFEVGEARLIGPDLVHQAMEKVKVIQERLKTAQSRQKSYT 1447

Query: 184  NVRRRDSKFHVNDWVFLESFTLRGII*FEKKEKL 285
            +VRRR  +F V+DWV+L+   ++G++ F KK KL
Sbjct: 1448 DVRRRALEFEVDDWVYLKVSPMKGVMRFGKKGKL 1481



 Score = 22.7 bits (47), Expect(2) = 2e-07
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = +3

Query: 282  VSLKYIRPYRILQKI 326
            +S +YI PYRI+Q++
Sbjct: 1481 LSPRYIGPYRIVQRV 1495


>gb|AAT38744.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1515

 Score = 58.2 bits (139), Expect(2) = 2e-07
 Identities = 33/94 (35%), Positives = 50/94 (53%)
 Frame = +1

Query: 4    STKMTPFEILCGPSYKPPISWYVVGKNRIASARLSP*GC*KS*INSGTFENG*KPQ*SYA 183
            S +M P+E L G   + PI W+ VG+ R+    L      K  +     +     Q SY 
Sbjct: 1382 SIQMAPYEALYGRRCRSPIGWFEVGEARLIGPDLVHQAMEKVKVIQERLKTAQSRQKSYT 1441

Query: 184  NVRRRDSKFHVNDWVFLESFTLRGII*FEKKEKL 285
            +VRRR  +F V+DWV+L+   ++G++ F KK KL
Sbjct: 1442 DVRRRALEFEVDDWVYLKVSPMKGVMRFGKKGKL 1475



 Score = 22.7 bits (47), Expect(2) = 2e-07
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = +3

Query: 282  VSLKYIRPYRILQKI 326
            +S +YI PYRI+Q++
Sbjct: 1475 LSPRYIGPYRIVQRV 1489


>gb|ABI34354.1| Retrotransposon gag protein [Solanum demissum]
          Length = 4543

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 35/110 (31%), Positives = 54/110 (49%)
 Frame = +1

Query: 4    STKMTPFEILCGPSYKPPISWYVVGKNRIASARLSP*GC*KS*INSGTFENG*KPQ*SYA 183
            S +M P+E L G   + PI W+ VG+ ++    L      K  +     +     Q SY 
Sbjct: 1137 SIQMAPYEALYGRRCRSPIGWFEVGEAQLIGPDLVHQAMEKVKVIKERLKTAQSRQKSYT 1196

Query: 184  NVRRRDSKFHVNDWVFLESFTLRGII*FEKKEKLVSNILDHTGSYKRSSN 333
            +VRRR  +F V+DWV+L+   ++G++ F KK KL    +      KR  N
Sbjct: 1197 DVRRRALEFEVDDWVYLKVSPMKGVMRFGKKGKLSPRYIGPYRIAKRIGN 1246



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 35/110 (31%), Positives = 54/110 (49%)
 Frame = +1

Query: 4    STKMTPFEILCGPSYKPPISWYVVGKNRIASARLSP*GC*KS*INSGTFENG*KPQ*SYA 183
            S +M P+E L G   + PI W+ VG+ ++    L      K  +     +     Q SY 
Sbjct: 2647 SIQMAPYEALYGRRCRSPIGWFEVGEAQLIGPDLVHQAMEKVKVIKERLKTAQSRQKSYT 2706

Query: 184  NVRRRDSKFHVNDWVFLESFTLRGII*FEKKEKLVSNILDHTGSYKRSSN 333
            +VRRR  +F V+DWV+L+   ++G++ F KK KL    +      KR  N
Sbjct: 2707 DVRRRALEFEVDDWVYLKVSPMKGVMRFGKKGKLSPRYIGPYRIAKRIGN 2756



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 35/110 (31%), Positives = 54/110 (49%)
 Frame = +1

Query: 4    STKMTPFEILCGPSYKPPISWYVVGKNRIASARLSP*GC*KS*INSGTFENG*KPQ*SYA 183
            S +M P+E L G   + PI W+ VG+ ++    L      K  +     +     Q SY 
Sbjct: 4157 SIQMAPYEALYGRRCRSPIGWFEVGEAQLIGPDLVHQAMEKVKVIKERLKTAQSRQKSYT 4216

Query: 184  NVRRRDSKFHVNDWVFLESFTLRGII*FEKKEKLVSNILDHTGSYKRSSN 333
            +VRRR  +F V+DWV+L+   ++G++ F KK KL    +      KR  N
Sbjct: 4217 DVRRRALEFEVDDWVYLKVSPMKGVMRFGKKGKLSPRYIGPYRIAKRIGN 4266


>gb|EOY17291.1| Uncharacterized protein TCM_036439 [Theobroma cacao]
          Length = 240

 Score = 52.4 bits (124), Expect(2) = 6e-06
 Identities = 34/94 (36%), Positives = 46/94 (48%)
 Frame = +1

Query: 4   STKMTPFEILCGPSYKPPISWYVVGKNRIASARLSP*GC*KS*INSGTFENG*KPQ*SYA 183
           S +M PFE L G   + PI W  VG+ ++    L      K  +           Q SYA
Sbjct: 31  SIQMAPFEALYGRRCRSPIGWLEVGERKLLGPELVQDATEKIHMIRQRMLTAQSRQKSYA 90

Query: 184 NVRRRDSKFHVNDWVFLESFTLRGII*FEKKEKL 285
           + RRRD +F V D VFL+    +G++ F KK KL
Sbjct: 91  DNRRRDLEFQVGDHVFLKVSPTKGVMRFGKKGKL 124



 Score = 23.1 bits (48), Expect(2) = 6e-06
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = +3

Query: 282 VSLKYIRPYRILQKI 326
           +S +YIRP+ IL+K+
Sbjct: 124 LSPRYIRPFEILEKV 138