BLASTX nr result
ID: Atropa21_contig00036226
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atropa21_contig00036226 (463 letters) Database: nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAT38724.1| Putative retrotransposon protein, identical [Sola... 58 2e-07 gb|AAT38744.1| Putative gag-pol polyprotein, identical [Solanum ... 58 2e-07 gb|ABI34354.1| Retrotransposon gag protein [Solanum demissum] 57 3e-06 gb|EOY17291.1| Uncharacterized protein TCM_036439 [Theobroma cacao] 52 6e-06 >gb|AAT38724.1| Putative retrotransposon protein, identical [Solanum demissum] Length = 1602 Score = 58.2 bits (139), Expect(2) = 2e-07 Identities = 33/94 (35%), Positives = 50/94 (53%) Frame = +1 Query: 4 STKMTPFEILCGPSYKPPISWYVVGKNRIASARLSP*GC*KS*INSGTFENG*KPQ*SYA 183 S +M P+E L G + PI W+ VG+ R+ L K + + Q SY Sbjct: 1388 SIQMAPYEALYGRRCRSPIGWFEVGEARLIGPDLVHQAMEKVKVIQERLKTAQSRQKSYT 1447 Query: 184 NVRRRDSKFHVNDWVFLESFTLRGII*FEKKEKL 285 +VRRR +F V+DWV+L+ ++G++ F KK KL Sbjct: 1448 DVRRRALEFEVDDWVYLKVSPMKGVMRFGKKGKL 1481 Score = 22.7 bits (47), Expect(2) = 2e-07 Identities = 8/15 (53%), Positives = 13/15 (86%) Frame = +3 Query: 282 VSLKYIRPYRILQKI 326 +S +YI PYRI+Q++ Sbjct: 1481 LSPRYIGPYRIVQRV 1495 >gb|AAT38744.1| Putative gag-pol polyprotein, identical [Solanum demissum] Length = 1515 Score = 58.2 bits (139), Expect(2) = 2e-07 Identities = 33/94 (35%), Positives = 50/94 (53%) Frame = +1 Query: 4 STKMTPFEILCGPSYKPPISWYVVGKNRIASARLSP*GC*KS*INSGTFENG*KPQ*SYA 183 S +M P+E L G + PI W+ VG+ R+ L K + + Q SY Sbjct: 1382 SIQMAPYEALYGRRCRSPIGWFEVGEARLIGPDLVHQAMEKVKVIQERLKTAQSRQKSYT 1441 Query: 184 NVRRRDSKFHVNDWVFLESFTLRGII*FEKKEKL 285 +VRRR +F V+DWV+L+ ++G++ F KK KL Sbjct: 1442 DVRRRALEFEVDDWVYLKVSPMKGVMRFGKKGKL 1475 Score = 22.7 bits (47), Expect(2) = 2e-07 Identities = 8/15 (53%), Positives = 13/15 (86%) Frame = +3 Query: 282 VSLKYIRPYRILQKI 326 +S +YI PYRI+Q++ Sbjct: 1475 LSPRYIGPYRIVQRV 1489 >gb|ABI34354.1| Retrotransposon gag protein [Solanum demissum] Length = 4543 Score = 57.0 bits (136), Expect = 3e-06 Identities = 35/110 (31%), Positives = 54/110 (49%) Frame = +1 Query: 4 STKMTPFEILCGPSYKPPISWYVVGKNRIASARLSP*GC*KS*INSGTFENG*KPQ*SYA 183 S +M P+E L G + PI W+ VG+ ++ L K + + Q SY Sbjct: 1137 SIQMAPYEALYGRRCRSPIGWFEVGEAQLIGPDLVHQAMEKVKVIKERLKTAQSRQKSYT 1196 Query: 184 NVRRRDSKFHVNDWVFLESFTLRGII*FEKKEKLVSNILDHTGSYKRSSN 333 +VRRR +F V+DWV+L+ ++G++ F KK KL + KR N Sbjct: 1197 DVRRRALEFEVDDWVYLKVSPMKGVMRFGKKGKLSPRYIGPYRIAKRIGN 1246 Score = 57.0 bits (136), Expect = 3e-06 Identities = 35/110 (31%), Positives = 54/110 (49%) Frame = +1 Query: 4 STKMTPFEILCGPSYKPPISWYVVGKNRIASARLSP*GC*KS*INSGTFENG*KPQ*SYA 183 S +M P+E L G + PI W+ VG+ ++ L K + + Q SY Sbjct: 2647 SIQMAPYEALYGRRCRSPIGWFEVGEAQLIGPDLVHQAMEKVKVIKERLKTAQSRQKSYT 2706 Query: 184 NVRRRDSKFHVNDWVFLESFTLRGII*FEKKEKLVSNILDHTGSYKRSSN 333 +VRRR +F V+DWV+L+ ++G++ F KK KL + KR N Sbjct: 2707 DVRRRALEFEVDDWVYLKVSPMKGVMRFGKKGKLSPRYIGPYRIAKRIGN 2756 Score = 57.0 bits (136), Expect = 3e-06 Identities = 35/110 (31%), Positives = 54/110 (49%) Frame = +1 Query: 4 STKMTPFEILCGPSYKPPISWYVVGKNRIASARLSP*GC*KS*INSGTFENG*KPQ*SYA 183 S +M P+E L G + PI W+ VG+ ++ L K + + Q SY Sbjct: 4157 SIQMAPYEALYGRRCRSPIGWFEVGEAQLIGPDLVHQAMEKVKVIKERLKTAQSRQKSYT 4216 Query: 184 NVRRRDSKFHVNDWVFLESFTLRGII*FEKKEKLVSNILDHTGSYKRSSN 333 +VRRR +F V+DWV+L+ ++G++ F KK KL + KR N Sbjct: 4217 DVRRRALEFEVDDWVYLKVSPMKGVMRFGKKGKLSPRYIGPYRIAKRIGN 4266 >gb|EOY17291.1| Uncharacterized protein TCM_036439 [Theobroma cacao] Length = 240 Score = 52.4 bits (124), Expect(2) = 6e-06 Identities = 34/94 (36%), Positives = 46/94 (48%) Frame = +1 Query: 4 STKMTPFEILCGPSYKPPISWYVVGKNRIASARLSP*GC*KS*INSGTFENG*KPQ*SYA 183 S +M PFE L G + PI W VG+ ++ L K + Q SYA Sbjct: 31 SIQMAPFEALYGRRCRSPIGWLEVGERKLLGPELVQDATEKIHMIRQRMLTAQSRQKSYA 90 Query: 184 NVRRRDSKFHVNDWVFLESFTLRGII*FEKKEKL 285 + RRRD +F V D VFL+ +G++ F KK KL Sbjct: 91 DNRRRDLEFQVGDHVFLKVSPTKGVMRFGKKGKL 124 Score = 23.1 bits (48), Expect(2) = 6e-06 Identities = 8/15 (53%), Positives = 13/15 (86%) Frame = +3 Query: 282 VSLKYIRPYRILQKI 326 +S +YIRP+ IL+K+ Sbjct: 124 LSPRYIRPFEILEKV 138