BLASTX nr result
ID: Atropa21_contig00036166
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atropa21_contig00036166 (1282 letters) Database: nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006367184.1| PREDICTED: uncharacterized protein LOC102601... 59 2e-07 ref|XP_004253445.1| PREDICTED: putative ribonuclease H protein A... 58 3e-07 gb|ABI34321.1| RNase H family protein [Solanum demissum] 53 9e-07 ref|XP_004243111.1| PREDICTED: putative ribonuclease H protein A... 54 8e-06 >ref|XP_006367184.1| PREDICTED: uncharacterized protein LOC102601483 [Solanum tuberosum] Length = 2019 Score = 58.9 bits (141), Expect(2) = 2e-07 Identities = 42/171 (24%), Positives = 69/171 (40%), Gaps = 7/171 (4%) Frame = +1 Query: 229 FTIGKQRCAFKYDGIRSSTSRVIDQVSNXXXXXXXXXXXXXXXXXVHRQIYVHRWNKIRP 408 + + K RCA KY G +S+ +RV V RWNK Sbjct: 1003 WNLWKNRCAVKYGGKQSNIARVKHLVILDNFKLLHTVFPYISWPL--------RWNKFCN 1054 Query: 409 TLD-------IKLVRWTKPSYNELKLNIDSCSKGNAGRXXXXXXXXXXXXXXXXXXHIGH 567 ++ + V+WTKP Y +KLN D + N G H+G Sbjct: 1055 VIENCSQDTKVTAVQWTKPPYRWVKLNTDGSALSNPGSIGAGDVIRN---------HLGE 1105 Query: 568 LVMVFTSHNGCSSKNKAEIQALKIGQHWSLHNSHQRERVESDSLLITQIIK 720 +++ +++ G + N+AE++A G W +H + + +E DS L+ K Sbjct: 1106 IILAYSTPLGTGTNNQAEVEAAIFGIAWCIHMKYNQVILEVDSQLLVDWFK 1156 Score = 24.6 bits (52), Expect(2) = 2e-07 Identities = 9/14 (64%), Positives = 12/14 (85%) Frame = +2 Query: 800 HCYREANFVVDLLA 841 H +REANFV D+L+ Sbjct: 1186 HTFREANFVADVLS 1199 >ref|XP_004253445.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum lycopersicum] Length = 338 Score = 57.8 bits (138), Expect(2) = 3e-07 Identities = 44/187 (23%), Positives = 76/187 (40%), Gaps = 1/187 (0%) Frame = +1 Query: 226 VFTIGKQRCAFKYDGIRSSTSRVIDQVSNXXXXXXXXXXXXXXXXXVHRQIYVHRWNKIR 405 V+ + K CA KY G ++ SRV V + V + + Sbjct: 93 VWNLWKNICACKYGGTSTNISRVKYAVYKDTFKMLKMAFPHINWPGSWAAL-VQKAENCK 151 Query: 406 PTLDIKLVRWTKPSYNELKLNIDSCSKGNAGRXXXXXXXXXXXXXXXXXXHIGHLVMVFT 585 + + +V W +PS +K+N D + N G+ G +VM F Sbjct: 152 HEIQVSMVTWNRPSEQWIKINTDGSALTNPGQTGAGGILRDKE---------GKMVMAFA 202 Query: 586 SHNGCSSKNKAEIQALKIGQHWSLHNSHQRERVESDSLLITQ-IIKKEIKASQQIQDFQE 762 + G + N AE +A+ G W+L H+ ++E D+ L+ + I +KE+ I + Sbjct: 203 TPLGEGTNNTAEAEAVLFGLSWALELGHRNIQIELDAQLVVKWITRKEVPHWSVINQIER 262 Query: 763 VQEMRMQ 783 +Q + MQ Sbjct: 263 IQHLIMQ 269 Score = 24.6 bits (52), Expect(2) = 3e-07 Identities = 14/44 (31%), Positives = 22/44 (50%) Frame = +2 Query: 797 THCYREANFVVDLLAN*VEHKNLNSFFAEDIN*PRQAIATLKND 928 TH +REAN+V D L+ + + + PR+A A + D Sbjct: 276 THIFREANWVADALSKHSHNIPAPQVYFSNNQLPREAQAYYQMD 319 >gb|ABI34321.1| RNase H family protein [Solanum demissum] Length = 945 Score = 52.8 bits (125), Expect(2) = 9e-07 Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 5/133 (3%) Frame = +1 Query: 382 VHRWNKIRPTLDIKLVRWTKPSYNELKLNID-SCSKGNAGRXXXXXXXXXXXXXXXXXXH 558 +++ +RP K+V W P+ N +K+N D S S GNAG H Sbjct: 730 LNKVESLRPYPKWKIVHWNTPNINCVKINTDGSFSSGNAG------------LGWIVRDH 777 Query: 559 IGHLVMVFTSHNGCSSKNKAEIQALKIGQHWSLHNSHQRERVESDSLLITQIIKK----E 726 ++M F+ + CSS N AE A + G W L +E DS L+ +++ Sbjct: 778 TRRMIMAFSIPSSCSSNNLAEALAARFGILWCLQQGFHNCYLELDSKLVVDMVRNGQATN 837 Query: 727 IKASQQIQDFQEV 765 +K ++D +V Sbjct: 838 LKIKGVVEDIIQV 850 Score = 28.1 bits (61), Expect(2) = 9e-07 Identities = 15/44 (34%), Positives = 23/44 (52%) Frame = +2 Query: 800 HCYREANFVVDLLAN*VEHKNLNSFFAEDIN*PRQAIATLKNDE 931 HCYREAN V D LA N + + + P+ A+ + + D+ Sbjct: 860 HCYREANQVADALAKHAVISNEAHMYHDWRDIPKLAVGSYQLDK 903 >ref|XP_004243111.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum lycopersicum] Length = 927 Score = 54.3 bits (129), Expect(2) = 8e-06 Identities = 46/207 (22%), Positives = 80/207 (38%) Frame = +1 Query: 130 ATSIWNYFSNSYGIVFSGGNIRTNI*QQSS*AVFTIGKQRCAFKYDGIRSSTSRVIDQVS 309 A IW Y ++S G++ + +R+ + Q CA KY G +SS +V +S Sbjct: 670 AKHIWKYHASSVGVIQANTTLRSQLIQ-------------CAVKYGGKQSSIQKVKYGIS 716 Query: 310 NXXXXXXXXXXXXXXXXXVHRQIYVHRWNKIRPTLDIKLVRWTKPSYNELKLNIDSCSKG 489 + ++ + + + +VRW KP + KLN + + Sbjct: 717 KETMQVIKLTFPNIPWQSNWESL-INIVEQCKQLYKVNMVRWIKPKQHVYKLNTNGSALA 775 Query: 490 NAGRXXXXXXXXXXXXXXXXXXHIGHLVMVFTSHNGCSSKNKAEIQALKIGQHWSLHNSH 669 +G+ H G L+ F+ G + N AE++A G W + + Sbjct: 776 ESGK---------IGGGGVLRHHQGKLICAFSVPLGVGTYNFAELKAATFGIDWCEQHGY 826 Query: 670 QRERVESDSLLITQIIKKEIKASQQIQ 750 + +E DS +I Q I IK + Q Sbjct: 827 KSIELEVDSEIICQWINNTIKPPWRCQ 853 Score = 23.5 bits (49), Expect(2) = 8e-06 Identities = 10/14 (71%), Positives = 10/14 (71%) Frame = +2 Query: 800 HCYREANFVVDLLA 841 H YREAN DLLA Sbjct: 873 HIYREANNTADLLA 886