BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00036166
         (1282 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006367184.1| PREDICTED: uncharacterized protein LOC102601...    59   2e-07
ref|XP_004253445.1| PREDICTED: putative ribonuclease H protein A...    58   3e-07
gb|ABI34321.1| RNase H family protein [Solanum demissum]               53   9e-07
ref|XP_004243111.1| PREDICTED: putative ribonuclease H protein A...    54   8e-06

>ref|XP_006367184.1| PREDICTED: uncharacterized protein LOC102601483 [Solanum tuberosum]
          Length = 2019

 Score = 58.9 bits (141), Expect(2) = 2e-07
 Identities = 42/171 (24%), Positives = 69/171 (40%), Gaps = 7/171 (4%)
 Frame = +1

Query: 229  FTIGKQRCAFKYDGIRSSTSRVIDQVSNXXXXXXXXXXXXXXXXXVHRQIYVHRWNKIRP 408
            + + K RCA KY G +S+ +RV   V                           RWNK   
Sbjct: 1003 WNLWKNRCAVKYGGKQSNIARVKHLVILDNFKLLHTVFPYISWPL--------RWNKFCN 1054

Query: 409  TLD-------IKLVRWTKPSYNELKLNIDSCSKGNAGRXXXXXXXXXXXXXXXXXXHIGH 567
             ++       +  V+WTKP Y  +KLN D  +  N G                   H+G 
Sbjct: 1055 VIENCSQDTKVTAVQWTKPPYRWVKLNTDGSALSNPGSIGAGDVIRN---------HLGE 1105

Query: 568  LVMVFTSHNGCSSKNKAEIQALKIGQHWSLHNSHQRERVESDSLLITQIIK 720
            +++ +++  G  + N+AE++A   G  W +H  + +  +E DS L+    K
Sbjct: 1106 IILAYSTPLGTGTNNQAEVEAAIFGIAWCIHMKYNQVILEVDSQLLVDWFK 1156



 Score = 24.6 bits (52), Expect(2) = 2e-07
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = +2

Query: 800  HCYREANFVVDLLA 841
            H +REANFV D+L+
Sbjct: 1186 HTFREANFVADVLS 1199


>ref|XP_004253445.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 338

 Score = 57.8 bits (138), Expect(2) = 3e-07
 Identities = 44/187 (23%), Positives = 76/187 (40%), Gaps = 1/187 (0%)
 Frame = +1

Query: 226 VFTIGKQRCAFKYDGIRSSTSRVIDQVSNXXXXXXXXXXXXXXXXXVHRQIYVHRWNKIR 405
           V+ + K  CA KY G  ++ SRV   V                       + V +    +
Sbjct: 93  VWNLWKNICACKYGGTSTNISRVKYAVYKDTFKMLKMAFPHINWPGSWAAL-VQKAENCK 151

Query: 406 PTLDIKLVRWTKPSYNELKLNIDSCSKGNAGRXXXXXXXXXXXXXXXXXXHIGHLVMVFT 585
             + + +V W +PS   +K+N D  +  N G+                    G +VM F 
Sbjct: 152 HEIQVSMVTWNRPSEQWIKINTDGSALTNPGQTGAGGILRDKE---------GKMVMAFA 202

Query: 586 SHNGCSSKNKAEIQALKIGQHWSLHNSHQRERVESDSLLITQ-IIKKEIKASQQIQDFQE 762
           +  G  + N AE +A+  G  W+L   H+  ++E D+ L+ + I +KE+     I   + 
Sbjct: 203 TPLGEGTNNTAEAEAVLFGLSWALELGHRNIQIELDAQLVVKWITRKEVPHWSVINQIER 262

Query: 763 VQEMRMQ 783
           +Q + MQ
Sbjct: 263 IQHLIMQ 269



 Score = 24.6 bits (52), Expect(2) = 3e-07
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +2

Query: 797 THCYREANFVVDLLAN*VEHKNLNSFFAEDIN*PRQAIATLKND 928
           TH +REAN+V D L+    +      +  +   PR+A A  + D
Sbjct: 276 THIFREANWVADALSKHSHNIPAPQVYFSNNQLPREAQAYYQMD 319


>gb|ABI34321.1| RNase H family protein [Solanum demissum]
          Length = 945

 Score = 52.8 bits (125), Expect(2) = 9e-07
 Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 5/133 (3%)
 Frame = +1

Query: 382  VHRWNKIRPTLDIKLVRWTKPSYNELKLNID-SCSKGNAGRXXXXXXXXXXXXXXXXXXH 558
            +++   +RP    K+V W  P+ N +K+N D S S GNAG                   H
Sbjct: 730  LNKVESLRPYPKWKIVHWNTPNINCVKINTDGSFSSGNAG------------LGWIVRDH 777

Query: 559  IGHLVMVFTSHNGCSSKNKAEIQALKIGQHWSLHNSHQRERVESDSLLITQIIKK----E 726
               ++M F+  + CSS N AE  A + G  W L        +E DS L+  +++      
Sbjct: 778  TRRMIMAFSIPSSCSSNNLAEALAARFGILWCLQQGFHNCYLELDSKLVVDMVRNGQATN 837

Query: 727  IKASQQIQDFQEV 765
            +K    ++D  +V
Sbjct: 838  LKIKGVVEDIIQV 850



 Score = 28.1 bits (61), Expect(2) = 9e-07
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +2

Query: 800 HCYREANFVVDLLAN*VEHKNLNSFFAEDIN*PRQAIATLKNDE 931
           HCYREAN V D LA      N    + +  + P+ A+ + + D+
Sbjct: 860 HCYREANQVADALAKHAVISNEAHMYHDWRDIPKLAVGSYQLDK 903


>ref|XP_004243111.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 927

 Score = 54.3 bits (129), Expect(2) = 8e-06
 Identities = 46/207 (22%), Positives = 80/207 (38%)
 Frame = +1

Query: 130  ATSIWNYFSNSYGIVFSGGNIRTNI*QQSS*AVFTIGKQRCAFKYDGIRSSTSRVIDQVS 309
            A  IW Y ++S G++ +   +R+ + Q             CA KY G +SS  +V   +S
Sbjct: 670  AKHIWKYHASSVGVIQANTTLRSQLIQ-------------CAVKYGGKQSSIQKVKYGIS 716

Query: 310  NXXXXXXXXXXXXXXXXXVHRQIYVHRWNKIRPTLDIKLVRWTKPSYNELKLNIDSCSKG 489
                                  + ++   + +    + +VRW KP  +  KLN +  +  
Sbjct: 717  KETMQVIKLTFPNIPWQSNWESL-INIVEQCKQLYKVNMVRWIKPKQHVYKLNTNGSALA 775

Query: 490  NAGRXXXXXXXXXXXXXXXXXXHIGHLVMVFTSHNGCSSKNKAEIQALKIGQHWSLHNSH 669
             +G+                  H G L+  F+   G  + N AE++A   G  W   + +
Sbjct: 776  ESGK---------IGGGGVLRHHQGKLICAFSVPLGVGTYNFAELKAATFGIDWCEQHGY 826

Query: 670  QRERVESDSLLITQIIKKEIKASQQIQ 750
            +   +E DS +I Q I   IK   + Q
Sbjct: 827  KSIELEVDSEIICQWINNTIKPPWRCQ 853



 Score = 23.5 bits (49), Expect(2) = 8e-06
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = +2

Query: 800 HCYREANFVVDLLA 841
           H YREAN   DLLA
Sbjct: 873 HIYREANNTADLLA 886