BLASTX nr result

ID: Atropa21_contig00036038 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00036038
         (528 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004232588.1| PREDICTED: eukaryotic translation initiation...    59   7e-07
ref|XP_004297441.1| PREDICTED: eukaryotic translation initiation...    48   1e-06

>ref|XP_004232588.1| PREDICTED: eukaryotic translation initiation factor 6-2-like
           [Solanum lycopersicum]
          Length = 224

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 26/30 (86%), Positives = 27/30 (90%)
 Frame = -2

Query: 92  LQHLRNSLPDSFEVQCIDEAHSALGNCIAC 3
           LQHL NSLP+S EVQCIDE HSALGNCIAC
Sbjct: 58  LQHLTNSLPNSVEVQCIDETHSALGNCIAC 87


>ref|XP_004297441.1| PREDICTED: eukaryotic translation initiation factor 6-2-like
           [Fragaria vesca subsp. vesca]
          Length = 245

 Score = 48.1 bits (113), Expect(2) = 1e-06
 Identities = 22/30 (73%), Positives = 24/30 (80%)
 Frame = -2

Query: 92  LQHLRNSLPDSFEVQCIDEAHSALGNCIAC 3
           LQHL+NSLPD   VQ +DE  SALGNCIAC
Sbjct: 81  LQHLKNSLPDQVVVQRVDERLSALGNCIAC 110



 Score = 29.6 bits (65), Expect(2) = 1e-06
 Identities = 18/31 (58%), Positives = 20/31 (64%)
 Frame = -3

Query: 214 SYISTFEDELAHVRGFPVIKTFINRSWSIGR 122
           S+ STFE ELA V   PVIKT I  +  IGR
Sbjct: 33  SFYSTFESELADV--IPVIKTSIGGTRIIGR 61


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