BLASTX nr result
ID: Atropa21_contig00035990
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00035990
(508 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596... 81 1e-24
ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein A... 76 1e-23
ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258... 67 1e-20
ref|XP_004253338.1| PREDICTED: putative ribonuclease H protein A... 64 4e-19
ref|XP_004248595.1| PREDICTED: uncharacterized protein LOC101261... 64 9e-19
ref|XP_004239566.1| PREDICTED: putative ribonuclease H protein A... 67 3e-18
ref|XP_004233578.1| PREDICTED: putative ribonuclease H protein A... 68 3e-18
ref|XP_004248946.1| PREDICTED: putative ribonuclease H protein A... 59 1e-15
ref|XP_004253220.1| PREDICTED: uncharacterized protein LOC101264... 57 2e-14
ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein A... 83 3e-14
ref|XP_006357717.1| PREDICTED: uncharacterized protein LOC102595... 57 7e-14
gb|AAD37021.1| putative non-LTR retrolelement reverse transcript... 55 3e-12
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga... 52 8e-12
emb|CAB78008.1| putative protein [Arabidopsis thaliana] gi|73210... 50 2e-11
gb|EOY17514.1| Uncharacterized protein TCM_042330 [Theobroma cacao] 55 3e-11
gb|EPS72636.1| hypothetical protein M569_02121, partial [Genlise... 51 3e-11
gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis ... 53 6e-11
ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein A... 52 1e-10
ref|XP_004244918.1| PREDICTED: putative ribonuclease H protein A... 69 6e-10
gb|AAC63844.1| putative non-LTR retroelement reverse transcripta... 51 1e-09
>ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596481 [Solanum tuberosum]
Length = 1135
Score = 81.3 bits (199), Expect(2) = 1e-24
Identities = 35/77 (45%), Positives = 54/77 (70%)
Frame = -3
Query: 233 FYAILQKIMNRLQASRGKILSFEGRAILIKHVL*SMPMHFHSTVNPPEKIIK*MHMIFAQ 54
F +L+K+ NR+ + K++SF R ILI HVL S+P++ + +NPP+ II +H +FA
Sbjct: 635 FENLLKKVSNRMNTWQNKLMSFGERYILIAHVLQSIPVYLLAAMNPPKSIIDQLHKLFAI 694
Query: 53 LFWSNTIGGKSRHWVAW 3
FWSN+ G +++HWVAW
Sbjct: 695 FFWSNSSGARNKHWVAW 711
Score = 57.4 bits (137), Expect(2) = 1e-24
Identities = 30/79 (37%), Positives = 43/79 (54%)
Frame = -2
Query: 504 PKVNHLAYVDDMIIFTLADI*TLLLVMEILRKYEKTSR*KINRDKDVAYMHKNVPVDISI 325
P V+HL+Y DD I+F ++ ++ ILR YEK S IN DK + Y+HK VP +
Sbjct: 544 PVVSHLSYADDTILFCSGQTTSMRKMINILRGYEKVSGQMINLDKSMIYLHKQVPNRVCN 603
Query: 324 IVEIANSITRKDFPLYICG 268
+V+ I + FP G
Sbjct: 604 LVKRITGIRQGSFPFTYLG 622
>ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 1035
Score = 75.9 bits (185), Expect(2) = 1e-23
Identities = 34/81 (41%), Positives = 51/81 (62%)
Frame = -3
Query: 245 KKQIFYAILQKIMNRLQASRGKILSFEGRAILIKHVL*SMPMHFHSTVNPPEKIIK*MHM 66
K + ++QKI R+ + L+F G+ ILI +VL SMP++ S + PP+K++ +H
Sbjct: 225 KSSYYVEMVQKIAKRILTWHNRFLTFGGKWILINNVLQSMPVYMLSALKPPKKVLDQIHQ 284
Query: 65 IFAQLFWSNTIGGKSRHWVAW 3
IFA+ FW N G K +HWVAW
Sbjct: 285 IFAKFFWGNLGGIKGKHWVAW 305
Score = 59.7 bits (143), Expect(2) = 1e-23
Identities = 27/79 (34%), Positives = 47/79 (59%)
Frame = -2
Query: 504 PKVNHLAYVDDMIIFTLADI*TLLLVMEILRKYEKTSR*KINRDKDVAYMHKNVPVDISI 325
P++NHL+Y +D I+F D +++ ++ ++R YE S K+N+ K Y+H N P+ I+I
Sbjct: 138 PEINHLSYANDTILFGSGDRGSIIKMIRVIRDYELVSGQKVNKTKSFFYLHDNTPIIIAI 197
Query: 324 IVEIANSITRKDFPLYICG 268
+ I + +FPL G
Sbjct: 198 RMRRLTGIRQGNFPLTYLG 216
>ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258077 [Solanum
lycopersicum]
Length = 1454
Score = 66.6 bits (161), Expect(2) = 1e-20
Identities = 30/79 (37%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Frame = -3
Query: 236 IFYA-ILQKIMNRLQASRGKILSFEGRAILIKHVL*SMPMHFHSTVNPPEKIIK*MHMIF 60
I+Y+ I++K++ ++ KIL+F G+ L+KHVL SMP+H S ++PP+ I+ + +
Sbjct: 835 IYYSEIVEKVIKKIAGWHLKILNFGGKVTLVKHVLQSMPIHTLSAISPPKTILNSIKKVI 894
Query: 59 AQLFWSNTIGGKSRHWVAW 3
A FW GK HW +W
Sbjct: 895 ADFFWGIEKDGKKYHWSSW 913
Score = 58.5 bits (140), Expect(2) = 1e-20
Identities = 29/80 (36%), Positives = 47/80 (58%)
Frame = -2
Query: 507 GPKVNHLAYVDDMIIFTLADI*TLLLVMEILRKYEKTSR*KINRDKDVAYMHKNVPVDIS 328
GPK+NHL++ DD+IIF+ D +L L+M+ + +YE+ S K+N+DK + N DI
Sbjct: 745 GPKINHLSFADDIIIFSSTDNNSLNLIMKTIDQYEEVSDQKVNKDKSFFMVTSNTSHDII 804
Query: 327 IIVEIANSITRKDFPLYICG 268
+ +RK+ P+ G
Sbjct: 805 EEISRITGFSRKNSPINYLG 824
>ref|XP_004253338.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 655
Score = 63.5 bits (153), Expect(2) = 4e-19
Identities = 28/79 (35%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Frame = -3
Query: 236 IFYA-ILQKIMNRLQASRGKILSFEGRAILIKHVL*SMPMHFHSTVNPPEKIIK*MHMIF 60
I+Y+ ++ KI+ ++ K+L+F G+ IL+KHVL S+P+H S ++PP+ + + +
Sbjct: 95 IYYSELVGKIIKKISGWHSKLLNFGGKIILVKHVLQSIPIHTLSAISPPKTTLNCIKKLI 154
Query: 59 AQLFWSNTIGGKSRHWVAW 3
A FW GK HW +W
Sbjct: 155 ADFFWGIDKDGKKYHWSSW 173
Score = 56.6 bits (135), Expect(2) = 4e-19
Identities = 28/80 (35%), Positives = 45/80 (56%)
Frame = -2
Query: 507 GPKVNHLAYVDDMIIFTLADI*TLLLVMEILRKYEKTSR*KINRDKDVAYMHKNVPVDIS 328
GP++NHL++ DD+IIF D +L +M+ + YE+ S K+N+DK + N DI
Sbjct: 5 GPQINHLSFADDIIIFASTDSDSLHQIMKTIEVYEQVSDQKVNKDKSFFMVTSNTGYDII 64
Query: 327 IIVEIANSITRKDFPLYICG 268
++ A RK+ P+ G
Sbjct: 65 EEIKRATGFNRKNSPINYLG 84
>ref|XP_004248595.1| PREDICTED: uncharacterized protein LOC101261371 [Solanum
lycopersicum]
Length = 1246
Score = 63.5 bits (153), Expect(2) = 9e-19
Identities = 27/79 (34%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Frame = -3
Query: 236 IFYA-ILQKIMNRLQASRGKILSFEGRAILIKHVL*SMPMHFHSTVNPPEKIIK*MHMIF 60
I+Y+ +++K++ R+ KIL+F G+ L+KHVL S+P+H + ++PP+ + + +
Sbjct: 641 IYYSEVVEKVIKRIAGWHSKILNFGGKITLVKHVLQSIPIHTLAAISPPKTTLNCIKKLI 700
Query: 59 AQLFWSNTIGGKSRHWVAW 3
A FW GK HW +W
Sbjct: 701 ADFFWGIDKDGKKYHWSSW 719
Score = 55.5 bits (132), Expect(2) = 9e-19
Identities = 28/80 (35%), Positives = 46/80 (57%)
Frame = -2
Query: 507 GPKVNHLAYVDDMIIFTLADI*TLLLVMEILRKYEKTSR*KINRDKDVAYMHKNVPVDIS 328
GPK+NHL++ DD+IIF D +L L+M+ + YE+ S ++N+ K + N DI
Sbjct: 551 GPKINHLSFADDIIIFASTDSNSLHLIMKTIELYEEVSDQQVNKHKSFFMVTSNTGHDII 610
Query: 327 IIVEIANSITRKDFPLYICG 268
++ A +RK+ P+ G
Sbjct: 611 EEIKRATGYSRKNSPINYLG 630
>ref|XP_004239566.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 606
Score = 66.6 bits (161), Expect(2) = 3e-18
Identities = 30/77 (38%), Positives = 45/77 (58%)
Frame = -3
Query: 233 FYAILQKIMNRLQASRGKILSFEGRAILIKHVL*SMPMHFHSTVNPPEKIIK*MHMIFAQ 54
F ++ K+++R+ + K LSF G+ +L KHVL ++P+H S V PP IIK + M+ A
Sbjct: 189 FSDLINKVVSRITGWQTKQLSFGGKVVLSKHVLQALPIHLLSAVTPPNTIIKQIQMLIAD 248
Query: 53 LFWSNTIGGKSRHWVAW 3
FW K HW +W
Sbjct: 249 FFWGWRNNNKKYHWSSW 265
Score = 50.8 bits (120), Expect(2) = 3e-18
Identities = 26/52 (50%), Positives = 34/52 (65%)
Frame = -2
Query: 507 GPKVNHLAYVDDMIIFTLADI*TLLLVMEILRKYEKTSR*KINRDKDVAYMH 352
GP+VNHL++ DD+I+FT TL L+M LR+YEK S IN DK +H
Sbjct: 97 GPQVNHLSFADDIILFTSGRSKTLKLLMYTLREYEKVSGQLINGDKSNFMLH 148
>ref|XP_004233578.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 955
Score = 68.2 bits (165), Expect(2) = 3e-18
Identities = 29/77 (37%), Positives = 46/77 (59%)
Frame = -3
Query: 233 FYAILQKIMNRLQASRGKILSFEGRAILIKHVL*SMPMHFHSTVNPPEKIIK*MHMIFAQ 54
F I++KI+ ++ KIL+F G+ L+KHVL S+P+H + V+PP+ +K + + A
Sbjct: 337 FSGIVEKIIRKISGWHAKILNFGGKITLVKHVLQSIPIHLLAAVSPPKTTLKYIKNVIAD 396
Query: 53 LFWSNTIGGKSRHWVAW 3
FW GK HW +W
Sbjct: 397 FFWGMDKDGKKYHWASW 413
Score = 48.9 bits (115), Expect(2) = 3e-18
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 7/87 (8%)
Frame = -2
Query: 507 GPKVNHLAYVDDMIIFTLADI*TLLLVMEILRKYEKTSR*KINRDKD--VAYMHKNVPVD 334
GP++NHL++ +D+IIFT D +L L+++ + +YE S ++N+DK + N +
Sbjct: 245 GPQINHLSFANDIIIFTSTDRQSLQLIVKTIEEYELISDQQVNKDKSFFMVTTKTNQAII 304
Query: 333 ISIIVE----IANS-ITRKDFPLYICG 268
SI +E I NS IT PLY+ G
Sbjct: 305 NSIKIETGFGIQNSPITYLGCPLYVGG 331
>ref|XP_004248946.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 622
Score = 58.5 bits (140), Expect(2) = 1e-15
Identities = 28/77 (36%), Positives = 46/77 (59%)
Frame = -3
Query: 233 FYAILQKIMNRLQASRGKILSFEGRAILIKHVL*SMPMHFHSTVNPPEKIIK*MHMIFAQ 54
F ++ K+++R+ + K LS+ G+A+L KHVL ++P+H S V PP+ II+ + M+ A
Sbjct: 97 FSDLINKVVSRITGWQTKQLSYGGKAVLSKHVLEALPIHLLSAVIPPKTIIRQIQMLIAD 156
Query: 53 LFWSNTIGGKSRHWVAW 3
FW K H +W
Sbjct: 157 FFWGWKNDRKKYHRSSW 173
Score = 50.1 bits (118), Expect(2) = 1e-15
Identities = 24/54 (44%), Positives = 35/54 (64%)
Frame = -2
Query: 507 GPKVNHLAYVDDMIIFTLADI*TLLLVMEILRKYEKTSR*KINRDKDVAYMHKN 346
GP+VNHL++ DD+I+FT TL ++M L++YEK S IN DK +H +
Sbjct: 5 GPQVNHLSFADDIILFTSGKSKTLKILMHTLKEYEKISGQLINGDKSHFMLHSS 58
>ref|XP_004253220.1| PREDICTED: uncharacterized protein LOC101264807 [Solanum
lycopersicum]
Length = 934
Score = 56.6 bits (135), Expect(2) = 2e-14
Identities = 27/80 (33%), Positives = 44/80 (55%)
Frame = -2
Query: 507 GPKVNHLAYVDDMIIFTLADI*TLLLVMEILRKYEKTSR*KINRDKDVAYMHKNVPVDIS 328
GP++NHL++ DD+IIFT +L L+ME + +YEK S ++N+DK + N +
Sbjct: 402 GPQINHLSFADDIIIFTSTTRNSLQLIMETIVEYEKVSNQQVNKDKSFYMVTNNTNQSVI 461
Query: 327 IIVEIANSITRKDFPLYICG 268
++ RK P+ G
Sbjct: 462 EVINEETGFRRKHSPIMYLG 481
Score = 47.4 bits (111), Expect(2) = 2e-14
Identities = 22/54 (40%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Frame = -3
Query: 236 IFYA-ILQKIMNRLQASRGKILSFEGRAILIKHVL*SMPMHFHSTVNPPEKIIK 78
I+Y+ ++ KI+ +++ KIL+F G+ L+KHVL SMP+H + V+PP+ +K
Sbjct: 492 IYYSELVDKIIKKIKGWHTKILNFGGKVTLVKHVLQSMPIHTLAAVSPPKTTLK 545
>ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 885
Score = 83.2 bits (204), Expect = 3e-14
Identities = 34/77 (44%), Positives = 56/77 (72%)
Frame = -3
Query: 233 FYAILQKIMNRLQASRGKILSFEGRAILIKHVL*SMPMHFHSTVNPPEKIIK*MHMIFAQ 54
F ++++K+M R+ + + ++LSF GR +LI +VL S+P++ S +NPP +I +H IFA+
Sbjct: 259 FESLIKKVMKRISSWQNRLLSFGGRYVLIANVLQSLPIYVVSAMNPPACVITQLHRIFAK 318
Query: 53 LFWSNTIGGKSRHWVAW 3
FW+NT G K++HWV W
Sbjct: 319 FFWANTAGAKNKHWVGW 335
>ref|XP_006357717.1| PREDICTED: uncharacterized protein LOC102595469 [Solanum tuberosum]
Length = 1079
Score = 56.6 bits (135), Expect(2) = 7e-14
Identities = 23/78 (29%), Positives = 43/78 (55%)
Frame = -3
Query: 236 IFYAILQKIMNRLQASRGKILSFEGRAILIKHVL*SMPMHFHSTVNPPEKIIK*MHMIFA 57
+F ++ KI++++ + K LS GR +LIKHVL S+ +H + ++PP ++ M +
Sbjct: 555 LFSEMMSKILHKIGGWQNKFLSIGGRVVLIKHVLMSLSVHSFAAIHPPIGVLNQMEKMLN 614
Query: 56 QLFWSNTIGGKSRHWVAW 3
+ W + HW +W
Sbjct: 615 RFLWGGSSEKTKMHWASW 632
Score = 45.8 bits (107), Expect(2) = 7e-14
Identities = 25/80 (31%), Positives = 41/80 (51%)
Frame = -2
Query: 507 GPKVNHLAYVDDMIIFTLADI*TLLLVMEILRKYEKTSR*KINRDKDVAYMHKNVPVDIS 328
GP++NHLA+ +D+I+F+ +L L+ME L YE+ S KIN+ K +
Sbjct: 464 GPRINHLAFANDVILFSSGCRRSLDLLMETLNNYERVSGQKINKSKSSVSLSSKENEQAR 523
Query: 327 IIVEIANSITRKDFPLYICG 268
V+ +T + P+ G
Sbjct: 524 QRVQEITGMTYRSLPIKYLG 543
>gb|AAD37021.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
thaliana]
Length = 732
Score = 55.1 bits (131), Expect(2) = 3e-12
Identities = 26/86 (30%), Positives = 46/86 (53%)
Frame = -3
Query: 260 LSPQMKKQIFYAILQKIMNRLQASRGKILSFEGRAILIKHVL*SMPMHFHSTVNPPEKII 81
L ++ K F IL+K+ RL +G+ LS GR L K VL S+P+H ST+ P+ +
Sbjct: 281 LQRRINKDTFGDILEKLTTRLAGWKGRFLSLAGRVTLTKAVLSSIPVHTMSTIALPKSTL 340
Query: 80 K*MHMIFAQLFWSNTIGGKSRHWVAW 3
+ + W +++ + +H ++W
Sbjct: 341 DGLDKVSRSFLWGSSVTQRKQHLISW 366
Score = 42.0 bits (97), Expect(2) = 3e-12
Identities = 17/70 (24%), Positives = 40/70 (57%)
Frame = -2
Query: 507 GPKVNHLAYVDDMIIFTLADI*TLLLVMEILRKYEKTSR*KINRDKDVAYMHKNVPVDIS 328
GPK++H+ + DD+I+F A + + ++ +L ++ S K++ +K + +NV D+
Sbjct: 198 GPKLSHICFADDLILFAEASVAQIRVIRRVLERFCVASGQKVSLEKSKIFFSENVSRDLG 257
Query: 327 IIVEIANSIT 298
++ + I+
Sbjct: 258 KLISDESGIS 267
>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1357
Score = 51.6 bits (122), Expect(2) = 8e-12
Identities = 23/86 (26%), Positives = 46/86 (53%)
Frame = -3
Query: 260 LSPQMKKQIFYAILQKIMNRLQASRGKILSFEGRAILIKHVL*SMPMHFHSTVNPPEKII 81
L + KK +F +L ++ +L+ + K+LS G+ +LIK V+ ++P + P +I
Sbjct: 763 LCGRSKKVLFRELLDRMWKKLRGWKEKLLSRAGKEVLIKAVIQALPTYLMGVYKLPVAVI 822
Query: 80 K*MHMIFAQLFWSNTIGGKSRHWVAW 3
+ +H A+ +W + HW++W
Sbjct: 823 QEIHSAMARFWWGGKGDERKMHWLSW 848
Score = 43.9 bits (102), Expect(2) = 8e-12
Identities = 21/55 (38%), Positives = 32/55 (58%)
Frame = -2
Query: 507 GPKVNHLAYVDDMIIFTLADI*TLLLVMEILRKYEKTSR*KINRDKDVAYMHKNV 343
GP+++HL + DD ++FT A L +++IL KYE S KIN +K + V
Sbjct: 680 GPEISHLLFADDSLLFTRATRQECLTIVDILNKYEAASGQKINYEKSEVSFSRGV 734
>emb|CAB78008.1| putative protein [Arabidopsis thaliana] gi|7321072|emb|CAB82119.1|
putative protein [Arabidopsis thaliana]
Length = 947
Score = 50.1 bits (118), Expect(2) = 2e-11
Identities = 26/86 (30%), Positives = 46/86 (53%)
Frame = -3
Query: 260 LSPQMKKQIFYAILQKIMNRLQASRGKILSFEGRAILIKHVL*SMPMHFHSTVNPPEKII 81
L ++ K F +L+++ +RL +G+ LSF GR L K VL +P+H ST++ P+ +
Sbjct: 433 LQRRINKDTFGEVLERVSSRLAGWKGRSLSFAGRLTLTKSVLSLIPIHTMSTISLPQSTL 492
Query: 80 K*MHMIFAQLFWSNTIGGKSRHWVAW 3
+ + + ++ K H VAW
Sbjct: 493 EGLDKLARVFLLGSSAEKKKLHLVAW 518
Score = 44.3 bits (103), Expect(2) = 2e-11
Identities = 20/69 (28%), Positives = 38/69 (55%)
Frame = -2
Query: 507 GPKVNHLAYVDDMIIFTLADI*TLLLVMEILRKYEKTSR*KINRDKDVAYMHKNVPVDIS 328
GPK++H+ + DD+I+F A + + ++ IL + S K++ DK + KNV D+
Sbjct: 350 GPKISHICFADDLILFAEASVSQIRVIRRILETFCIASGQKVSLDKSKIFFSKNVSRDLE 409
Query: 327 IIVEIANSI 301
++ + I
Sbjct: 410 KLISKESGI 418
>gb|EOY17514.1| Uncharacterized protein TCM_042330 [Theobroma cacao]
Length = 2249
Score = 55.5 bits (132), Expect(2) = 3e-11
Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 5/99 (5%)
Frame = -3
Query: 284 HCIFVVSYLSPQMKKQ-----IFYAILQKIMNRLQASRGKILSFEGRAILIKHVL*SMPM 120
H + +++YL + K +F ++ KI R+ KILS GR L++ VL S+P+
Sbjct: 1624 HQLLLITYLGAPLYKGHKKVILFNDLVAKIEERITGWENKILSPGGRITLLRSVLASLPI 1683
Query: 119 HFHSTVNPPEKIIK*MHMIFAQLFWSNTIGGKSRHWVAW 3
+ + PP +++ ++ IF W + K HW +W
Sbjct: 1684 YLLQVLKPPICVLERVNRIFNSFLWGGSAASKKIHWASW 1722
Score = 38.1 bits (87), Expect(2) = 3e-11
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = -2
Query: 498 VNHLAYVDDMIIFTLADI*TLLLVMEILRKYEKTSR*KINRDKDVAYMHKNV 343
V+HLA+ DD++IFT L ++ L++Y++ S +IN K H NV
Sbjct: 1557 VSHLAFADDVLIFTNGSKSALQRILAFLQEYQEISGQRINVQKSCFVTHTNV 1608
>gb|EPS72636.1| hypothetical protein M569_02121, partial [Genlisea aurea]
Length = 1503
Score = 51.2 bits (121), Expect(2) = 3e-11
Identities = 28/108 (25%), Positives = 56/108 (51%), Gaps = 1/108 (0%)
Frame = -3
Query: 323 LWK*QIA*LERIFHCIFV-VSYLSPQMKKQIFYAILQKIMNRLQASRGKILSFEGRAILI 147
+W + L + H I++ + L+ KK++F +L+++ +++ K LS G+ +LI
Sbjct: 1073 IWSRGLGFLVKSHHDIYLGLPSLTGSSKKRLFSGLLERVNRKIEGWNSKFLSQAGKLVLI 1132
Query: 146 KHVL*SMPMHFHSTVNPPEKIIK*MHMIFAQLFWSNTIGGKSRHWVAW 3
K VL ++P + S P+ + + ++ +W N GK HW +W
Sbjct: 1133 KAVLQAIPAYTMSCFALPKSFLGDLQSAISRYWWRNR-NGKGIHWKSW 1179
Score = 42.4 bits (98), Expect(2) = 3e-11
Identities = 21/56 (37%), Positives = 29/56 (51%)
Frame = -2
Query: 507 GPKVNHLAYVDDMIIFTLADI*TLLLVMEILRKYEKTSR*KINRDKDVAYMHKNVP 340
GP ++HL + DD +IF A L V +IL+ YE+ S K+N K N P
Sbjct: 1012 GPSISHLFFADDAMIFCEASCAALSRVSDILQDYERASGQKVNTHKSAMVFSPNTP 1067
>gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis cebennensis]
Length = 799
Score = 53.1 bits (126), Expect(2) = 6e-11
Identities = 28/86 (32%), Positives = 45/86 (52%)
Frame = -3
Query: 260 LSPQMKKQIFYAILQKIMNRLQASRGKILSFEGRAILIKHVL*SMPMHFHSTVNPPEKII 81
L ++ K F IL ++ +RL +G++LS GR L K VL S+P+H ST+ P+ +
Sbjct: 211 LQKRINKDTFGEILLRVSSRLAGWKGRMLSLAGRLTLTKSVLSSIPIHTMSTIALPKATL 270
Query: 80 K*MHMIFAQLFWSNTIGGKSRHWVAW 3
I W ++ K +H +AW
Sbjct: 271 DGFDRISKSFVWGSSTEKKKQHLLAW 296
Score = 39.3 bits (90), Expect(2) = 6e-11
Identities = 18/69 (26%), Positives = 38/69 (55%)
Frame = -2
Query: 507 GPKVNHLAYVDDMIIFTLADI*TLLLVMEILRKYEKTSR*KINRDKDVAYMHKNVPVDIS 328
GP ++H+ + DD+I+F A + + +V ++L K+ S K++ +K + +NV D+
Sbjct: 128 GPLLSHICFADDLILFAEASVAQIRVVRKVLEKFCIASGQKVSLEKSKIFFSQNVHRDLE 187
Query: 327 IIVEIANSI 301
+ + I
Sbjct: 188 KFISDESGI 196
>ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 1152
Score = 52.4 bits (124), Expect(2) = 1e-10
Identities = 24/81 (29%), Positives = 41/81 (50%)
Frame = -3
Query: 245 KKQIFYAILQKIMNRLQASRGKILSFEGRAILIKHVL*SMPMHFHSTVNPPEKIIK*MHM 66
K + F ++ ++ R Q R K LS G+ +L+K V+ S+P + S P + MH
Sbjct: 519 KDEAFRYLIDRVRKRTQGWRDKTLSGVGKEVLLKAVIQSIPTYVMSCFELPRHLCNEMHQ 578
Query: 65 IFAQLFWSNTIGGKSRHWVAW 3
+ A+ +W + HW+AW
Sbjct: 579 LMARFWWGEFGDERKIHWIAW 599
Score = 38.9 bits (89), Expect(2) = 1e-10
Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
Frame = -2
Query: 504 PKVNHLAYVDDMIIFTLADI*TLLLVMEILRKYEKTSR*KINRDKDVAYMHKNVPV---- 337
P ++HL + DD IF+ A+ +L + +I YE S +IN +K +NVP+
Sbjct: 432 PSISHLYFADDSFIFSRAEERDMLCMKDIFVTYETMSGQQINYEKSSVSFSRNVPLWKQH 491
Query: 336 DISIIVEIANSITRKDFPLYICGVLSITADEKTNFL 229
D++ ++ + + + L + LS + DE +L
Sbjct: 492 DLAAVLGVQRVENHEKY-LGLPTELSYSKDEAFRYL 526
>ref|XP_004244918.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 1010
Score = 68.9 bits (167), Expect = 6e-10
Identities = 31/81 (38%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Frame = -3
Query: 245 KKQIFYA-ILQKIMNRLQASRGKILSFEGRAILIKHVL*SMPMHFHSTVNPPEKIIK*MH 69
K I+Y+ ++ K++ R+ + KIL+F G+ L+KHVL S+P+H +T++PP+ IIK ++
Sbjct: 387 KSIIYYSELVDKVIKRITGWQSKILNFGGKITLVKHVLQSIPIHTLATISPPKTIIKNIN 446
Query: 68 MIFAQLFWSNTIGGKSRHWVA 6
+ A FW + GK HW +
Sbjct: 447 KVIADFFWGSDSVGKKYHWAS 467
Score = 60.5 bits (145), Expect = 2e-07
Identities = 36/114 (31%), Positives = 60/114 (52%), Gaps = 1/114 (0%)
Frame = -2
Query: 507 GPKVNHLAYVDDMIIFTLADI*TLLLVMEILRKYEKTSR*KINRDKDVAYMHKNVPVDIS 328
GP++NHL++ DD+IIFT D+ +L L+M +++YE S ++N+DK N DI
Sbjct: 300 GPQINHLSFADDIIIFTSTDLKSLQLIMHTIKEYEGVSDQRVNKDKSFCMATVNTRTDIQ 359
Query: 327 IIVEIANSITRKDFPL-YICGVLSITADEKTNFLCYTTEDYEQITGFKRKNIIF 169
IV+ K P+ Y+ L I + + ++ITG++ K + F
Sbjct: 360 EIVKSVTGYHMKTSPINYLGCPLYIGGKSIIYYSELVDKVIKRITGWQSKILNF 413
>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1231
Score = 51.2 bits (121), Expect(2) = 1e-09
Identities = 26/86 (30%), Positives = 44/86 (51%)
Frame = -3
Query: 260 LSPQMKKQIFYAILQKIMNRLQASRGKILSFEGRAILIKHVL*SMPMHFHSTVNPPEKII 81
L +M K+ F +L+++ RL +G+ LS GR L K VL S+P+H S + P +
Sbjct: 619 LQKRMNKETFGEVLERVSARLAGWKGRSLSLAGRITLTKAVLSSIPVHVMSAILLPVSTL 678
Query: 80 K*MHMIFAQLFWSNTIGGKSRHWVAW 3
+ W +T+ K +H ++W
Sbjct: 679 DTLDRYSRTFLWGSTMEKKKQHLLSW 704
Score = 37.0 bits (84), Expect(2) = 1e-09
Identities = 15/69 (21%), Positives = 38/69 (55%)
Frame = -2
Query: 507 GPKVNHLAYVDDMIIFTLADI*TLLLVMEILRKYEKTSR*KINRDKDVAYMHKNVPVDIS 328
G K++H+ + DD+I+F A + + ++ +L ++ + S K++ +K + NV ++
Sbjct: 536 GSKLSHVCFADDLILFAEASVAQIRIIRRVLERFCEASGQKVSLEKSKIFFSHNVSREME 595
Query: 327 IIVEIANSI 301
++ + I
Sbjct: 596 QLISEESGI 604