BLASTX nr result
ID: Atropa21_contig00035954
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00035954
(451 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006350816.1| PREDICTED: serine/arginine repetitive matrix... 149 4e-34
ref|XP_004241182.1| PREDICTED: uncharacterized protein LOC101261... 149 5e-34
ref|XP_002520437.1| FUS-interacting serine-arginine-rich protein... 143 3e-32
ref|XP_006586189.1| PREDICTED: uncharacterized RNA-binding prote... 142 5e-32
ref|XP_003530834.1| PREDICTED: uncharacterized RNA-binding prote... 142 5e-32
gb|AFK47423.1| unknown [Medicago truncatula] 141 1e-31
gb|ESW18714.1| hypothetical protein PHAVU_006G064000g [Phaseolus... 140 1e-31
gb|AFK40884.1| unknown [Lotus japonicus] 140 2e-31
ref|XP_006425006.1| hypothetical protein CICLE_v10028652mg [Citr... 139 3e-31
ref|XP_002280779.2| PREDICTED: uncharacterized protein LOC100246... 139 3e-31
ref|XP_003551321.1| PREDICTED: pre-mRNA-splicing factor cwc22-li... 139 3e-31
emb|CBI16010.3| unnamed protein product [Vitis vinifera] 139 3e-31
emb|CAN63579.1| hypothetical protein VITISV_029585 [Vitis vinifera] 139 3e-31
ref|XP_002314126.1| transformer serine/arginine-rich ribonucleop... 138 9e-31
gb|EXC01499.1| Uncharacterized RNA-binding protein [Morus notabi... 137 1e-30
ref|XP_006649804.1| PREDICTED: scaffold attachment factor B2-lik... 137 1e-30
ref|XP_006649803.1| PREDICTED: scaffold attachment factor B2-lik... 137 1e-30
ref|XP_004294256.1| PREDICTED: uncharacterized protein LOC101294... 137 1e-30
gb|EOY33816.1| RNA-binding family protein isoform 4 [Theobroma c... 137 1e-30
gb|EOY33814.1| RNA-binding family protein isoform 2 [Theobroma c... 137 1e-30
>ref|XP_006350816.1| PREDICTED: serine/arginine repetitive matrix protein 2-like
[Solanum tuberosum]
Length = 385
Score = 149 bits (376), Expect = 4e-34
Identities = 72/80 (90%), Positives = 75/80 (93%)
Frame = -2
Query: 240 KNPGNNLYVTGLSARVKERDIEKHFSTEGKVEDVHLVLDPWTRESRGFGFVTMSSVDEAD 61
+NPGNNLYVTGLS RVKERD+EKHFS EGKVEDV LV DPWTRESRGFGFVTMSSV+EAD
Sbjct: 42 ENPGNNLYVTGLSTRVKERDVEKHFSAEGKVEDVRLVFDPWTRESRGFGFVTMSSVEEAD 101
Query: 60 RCIKYLNRSVLEGRVITVEK 1
RCIK LNRSVLEGRVITVEK
Sbjct: 102 RCIKSLNRSVLEGRVITVEK 121
>ref|XP_004241182.1| PREDICTED: uncharacterized protein LOC101261529 [Solanum
lycopersicum]
Length = 386
Score = 149 bits (375), Expect = 5e-34
Identities = 72/80 (90%), Positives = 75/80 (93%)
Frame = -2
Query: 240 KNPGNNLYVTGLSARVKERDIEKHFSTEGKVEDVHLVLDPWTRESRGFGFVTMSSVDEAD 61
+NPGNNLYVTGLS RVKERDIEKHFS EGKVEDV LVLDPWT ESRGFGFVTMSSV+EAD
Sbjct: 42 ENPGNNLYVTGLSTRVKERDIEKHFSAEGKVEDVRLVLDPWTHESRGFGFVTMSSVEEAD 101
Query: 60 RCIKYLNRSVLEGRVITVEK 1
RCIK LNRS+LEGRVITVEK
Sbjct: 102 RCIKSLNRSILEGRVITVEK 121
>ref|XP_002520437.1| FUS-interacting serine-arginine-rich protein 1, putative [Ricinus
communis] gi|223540279|gb|EEF41850.1| FUS-interacting
serine-arginine-rich protein 1, putative [Ricinus
communis]
Length = 399
Score = 143 bits (360), Expect = 3e-32
Identities = 67/80 (83%), Positives = 76/80 (95%)
Frame = -2
Query: 240 KNPGNNLYVTGLSARVKERDIEKHFSTEGKVEDVHLVLDPWTRESRGFGFVTMSSVDEAD 61
+NPGNNLYVTGLS R+ +RD+EKHF++EGKV DVHLV+DPWTRESRGFGFVTMS++ EAD
Sbjct: 43 ENPGNNLYVTGLSPRITKRDLEKHFASEGKVIDVHLVVDPWTRESRGFGFVTMSTLVEAD 102
Query: 60 RCIKYLNRSVLEGRVITVEK 1
RCIKYLNRSVLEGRVITVEK
Sbjct: 103 RCIKYLNRSVLEGRVITVEK 122
>ref|XP_006586189.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01-like
isoform X2 [Glycine max]
gi|571474306|ref|XP_006586190.1| PREDICTED:
uncharacterized RNA-binding protein C25G10.01-like
isoform X3 [Glycine max]
Length = 143
Score = 142 bits (358), Expect = 5e-32
Identities = 65/80 (81%), Positives = 75/80 (93%)
Frame = -2
Query: 240 KNPGNNLYVTGLSARVKERDIEKHFSTEGKVEDVHLVLDPWTRESRGFGFVTMSSVDEAD 61
+NPGNNLYVTGLS R+ +R++EKHFS EGKV DVHLV+DPWTRESRGFGFVTM +++EAD
Sbjct: 44 ENPGNNLYVTGLSPRITKRELEKHFSAEGKVIDVHLVVDPWTRESRGFGFVTMETLEEAD 103
Query: 60 RCIKYLNRSVLEGRVITVEK 1
RC+KYLNRSVLEGRVITVEK
Sbjct: 104 RCVKYLNRSVLEGRVITVEK 123
>ref|XP_003530834.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01-like
isoform X1 [Glycine max]
Length = 362
Score = 142 bits (358), Expect = 5e-32
Identities = 65/80 (81%), Positives = 75/80 (93%)
Frame = -2
Query: 240 KNPGNNLYVTGLSARVKERDIEKHFSTEGKVEDVHLVLDPWTRESRGFGFVTMSSVDEAD 61
+NPGNNLYVTGLS R+ +R++EKHFS EGKV DVHLV+DPWTRESRGFGFVTM +++EAD
Sbjct: 44 ENPGNNLYVTGLSPRITKRELEKHFSAEGKVIDVHLVVDPWTRESRGFGFVTMETLEEAD 103
Query: 60 RCIKYLNRSVLEGRVITVEK 1
RC+KYLNRSVLEGRVITVEK
Sbjct: 104 RCVKYLNRSVLEGRVITVEK 123
>gb|AFK47423.1| unknown [Medicago truncatula]
Length = 340
Score = 141 bits (355), Expect = 1e-31
Identities = 64/80 (80%), Positives = 75/80 (93%)
Frame = -2
Query: 240 KNPGNNLYVTGLSARVKERDIEKHFSTEGKVEDVHLVLDPWTRESRGFGFVTMSSVDEAD 61
+NPGNNLYVTGLS R+ +R++EKHFS +GKV DVHLV+DPWTRESRGFGFVTM +++EAD
Sbjct: 41 ENPGNNLYVTGLSPRITKRELEKHFSAKGKVVDVHLVVDPWTRESRGFGFVTMDTLEEAD 100
Query: 60 RCIKYLNRSVLEGRVITVEK 1
RC+KYLNRSVLEGRVITVEK
Sbjct: 101 RCVKYLNRSVLEGRVITVEK 120
>gb|ESW18714.1| hypothetical protein PHAVU_006G064000g [Phaseolus vulgaris]
Length = 369
Score = 140 bits (354), Expect = 1e-31
Identities = 64/80 (80%), Positives = 74/80 (92%)
Frame = -2
Query: 240 KNPGNNLYVTGLSARVKERDIEKHFSTEGKVEDVHLVLDPWTRESRGFGFVTMSSVDEAD 61
+NPGNNLYVTGLS R+ +R++EKHF+ EGKV DVHLV+DPWTRESRGFGFVTM +V+ AD
Sbjct: 48 ENPGNNLYVTGLSPRITKRELEKHFAAEGKVRDVHLVVDPWTRESRGFGFVTMETVEVAD 107
Query: 60 RCIKYLNRSVLEGRVITVEK 1
RC+KYLNRSVLEGRVITVEK
Sbjct: 108 RCVKYLNRSVLEGRVITVEK 127
>gb|AFK40884.1| unknown [Lotus japonicus]
Length = 344
Score = 140 bits (352), Expect = 2e-31
Identities = 63/80 (78%), Positives = 76/80 (95%)
Frame = -2
Query: 240 KNPGNNLYVTGLSARVKERDIEKHFSTEGKVEDVHLVLDPWTRESRGFGFVTMSSVDEAD 61
+NPGNNLYVTGLS R+ +R++EKHF+TEGKV DVHLV+DPWTRESRGFGFVTM ++++A+
Sbjct: 44 ENPGNNLYVTGLSPRITKRELEKHFATEGKVIDVHLVVDPWTRESRGFGFVTMDTLEDAN 103
Query: 60 RCIKYLNRSVLEGRVITVEK 1
RC+KYLNRSVLEGRVITVEK
Sbjct: 104 RCVKYLNRSVLEGRVITVEK 123
>ref|XP_006425006.1| hypothetical protein CICLE_v10028652mg [Citrus clementina]
gi|568870553|ref|XP_006488466.1| PREDICTED:
uncharacterized RNA-binding protein C25G10.01-like
isoform X1 [Citrus sinensis] gi|557526940|gb|ESR38246.1|
hypothetical protein CICLE_v10028652mg [Citrus
clementina]
Length = 381
Score = 139 bits (351), Expect = 3e-31
Identities = 63/80 (78%), Positives = 76/80 (95%)
Frame = -2
Query: 240 KNPGNNLYVTGLSARVKERDIEKHFSTEGKVEDVHLVLDPWTRESRGFGFVTMSSVDEAD 61
+NPGNNLYVTGLS R+ +R++EKHF+ EGKV DVHLV+DPWTRESRGFGFVTM++V+EAD
Sbjct: 40 ENPGNNLYVTGLSPRITKRELEKHFAAEGKVIDVHLVVDPWTRESRGFGFVTMATVEEAD 99
Query: 60 RCIKYLNRSVLEGRVITVEK 1
RCIKYL+RSVLEGR+ITVE+
Sbjct: 100 RCIKYLDRSVLEGRIITVER 119
>ref|XP_002280779.2| PREDICTED: uncharacterized protein LOC100246735 [Vitis vinifera]
Length = 330
Score = 139 bits (351), Expect = 3e-31
Identities = 65/80 (81%), Positives = 75/80 (93%)
Frame = -2
Query: 240 KNPGNNLYVTGLSARVKERDIEKHFSTEGKVEDVHLVLDPWTRESRGFGFVTMSSVDEAD 61
+NPGNNLYVTGLS RV +R++EKHF++EG V DVHLV DPWTRESRGFGFVTMS+V+EA+
Sbjct: 45 ENPGNNLYVTGLSTRVTKRELEKHFASEGSVADVHLVTDPWTRESRGFGFVTMSTVEEAN 104
Query: 60 RCIKYLNRSVLEGRVITVEK 1
RCIKYL+RSVLEGRVITVEK
Sbjct: 105 RCIKYLDRSVLEGRVITVEK 124
>ref|XP_003551321.1| PREDICTED: pre-mRNA-splicing factor cwc22-like [Glycine max]
Length = 364
Score = 139 bits (351), Expect = 3e-31
Identities = 63/80 (78%), Positives = 75/80 (93%)
Frame = -2
Query: 240 KNPGNNLYVTGLSARVKERDIEKHFSTEGKVEDVHLVLDPWTRESRGFGFVTMSSVDEAD 61
+NPGNNLYVTGLS R+ +R++EKHF+ EGKV DVHLV+DPWTRESRGFGFVTM +++EA+
Sbjct: 46 ENPGNNLYVTGLSPRITKRELEKHFAAEGKVIDVHLVVDPWTRESRGFGFVTMETLEEAE 105
Query: 60 RCIKYLNRSVLEGRVITVEK 1
RC+KYLNRSVLEGRVITVEK
Sbjct: 106 RCVKYLNRSVLEGRVITVEK 125
>emb|CBI16010.3| unnamed protein product [Vitis vinifera]
Length = 198
Score = 139 bits (351), Expect = 3e-31
Identities = 65/80 (81%), Positives = 75/80 (93%)
Frame = -2
Query: 240 KNPGNNLYVTGLSARVKERDIEKHFSTEGKVEDVHLVLDPWTRESRGFGFVTMSSVDEAD 61
+NPGNNLYVTGLS RV +R++EKHF++EG V DVHLV DPWTRESRGFGFVTMS+V+EA+
Sbjct: 45 ENPGNNLYVTGLSTRVTKRELEKHFASEGSVADVHLVTDPWTRESRGFGFVTMSTVEEAN 104
Query: 60 RCIKYLNRSVLEGRVITVEK 1
RCIKYL+RSVLEGRVITVEK
Sbjct: 105 RCIKYLDRSVLEGRVITVEK 124
>emb|CAN63579.1| hypothetical protein VITISV_029585 [Vitis vinifera]
Length = 241
Score = 139 bits (351), Expect = 3e-31
Identities = 65/80 (81%), Positives = 75/80 (93%)
Frame = -2
Query: 240 KNPGNNLYVTGLSARVKERDIEKHFSTEGKVEDVHLVLDPWTRESRGFGFVTMSSVDEAD 61
+NPGNNLYVTGLS RV +R++EKHF++EG V DVHLV DPWTRESRGFGFVTMS+V+EA+
Sbjct: 45 ENPGNNLYVTGLSTRVTKRELEKHFASEGSVADVHLVTDPWTRESRGFGFVTMSTVEEAN 104
Query: 60 RCIKYLNRSVLEGRVITVEK 1
RCIKYL+RSVLEGRVITVEK
Sbjct: 105 RCIKYLDRSVLEGRVITVEK 124
>ref|XP_002314126.1| transformer serine/arginine-rich ribonucleoprotein [Populus
trichocarpa] gi|222850534|gb|EEE88081.1| transformer
serine/arginine-rich ribonucleoprotein [Populus
trichocarpa]
Length = 316
Score = 138 bits (347), Expect = 9e-31
Identities = 64/80 (80%), Positives = 74/80 (92%)
Frame = -2
Query: 240 KNPGNNLYVTGLSARVKERDIEKHFSTEGKVEDVHLVLDPWTRESRGFGFVTMSSVDEAD 61
+NPGNNLYVTGLS R+ ++++EKHFS EG V DVHLV+DPWTRESRGFGFVTMS+V+EAD
Sbjct: 48 ENPGNNLYVTGLSPRITKKELEKHFSAEGTVIDVHLVVDPWTRESRGFGFVTMSTVEEAD 107
Query: 60 RCIKYLNRSVLEGRVITVEK 1
CIKYL+RSVLEGRVITVEK
Sbjct: 108 HCIKYLDRSVLEGRVITVEK 127
>gb|EXC01499.1| Uncharacterized RNA-binding protein [Morus notabilis]
Length = 492
Score = 137 bits (346), Expect = 1e-30
Identities = 66/79 (83%), Positives = 74/79 (93%)
Frame = -2
Query: 237 NPGNNLYVTGLSARVKERDIEKHFSTEGKVEDVHLVLDPWTRESRGFGFVTMSSVDEADR 58
NPGNNLYVTGLS R+ +R++EKHF TEGKV DVHLV+DP TRESRGFGFV+MSSV+EADR
Sbjct: 144 NPGNNLYVTGLSPRITKRELEKHFVTEGKVVDVHLVVDPCTRESRGFGFVSMSSVEEADR 203
Query: 57 CIKYLNRSVLEGRVITVEK 1
CIKYL+RSVLEGRVITVEK
Sbjct: 204 CIKYLDRSVLEGRVITVEK 222
>ref|XP_006649804.1| PREDICTED: scaffold attachment factor B2-like isoform X2 [Oryza
brachyantha]
Length = 126
Score = 137 bits (346), Expect = 1e-30
Identities = 65/80 (81%), Positives = 74/80 (92%)
Frame = -2
Query: 240 KNPGNNLYVTGLSARVKERDIEKHFSTEGKVEDVHLVLDPWTRESRGFGFVTMSSVDEAD 61
+NPGNNLYVTGLSARV +RD+EKHFSTEG+V D +VLDPWTRESRGFGFVTM++V+EA
Sbjct: 40 ENPGNNLYVTGLSARVTDRDLEKHFSTEGEVIDASIVLDPWTRESRGFGFVTMATVEEAG 99
Query: 60 RCIKYLNRSVLEGRVITVEK 1
RCIKYL+ SVLEGRVITVEK
Sbjct: 100 RCIKYLDHSVLEGRVITVEK 119
>ref|XP_006649803.1| PREDICTED: scaffold attachment factor B2-like isoform X1 [Oryza
brachyantha]
Length = 340
Score = 137 bits (346), Expect = 1e-30
Identities = 65/80 (81%), Positives = 74/80 (92%)
Frame = -2
Query: 240 KNPGNNLYVTGLSARVKERDIEKHFSTEGKVEDVHLVLDPWTRESRGFGFVTMSSVDEAD 61
+NPGNNLYVTGLSARV +RD+EKHFSTEG+V D +VLDPWTRESRGFGFVTM++V+EA
Sbjct: 40 ENPGNNLYVTGLSARVTDRDLEKHFSTEGEVIDASIVLDPWTRESRGFGFVTMATVEEAG 99
Query: 60 RCIKYLNRSVLEGRVITVEK 1
RCIKYL+ SVLEGRVITVEK
Sbjct: 100 RCIKYLDHSVLEGRVITVEK 119
>ref|XP_004294256.1| PREDICTED: uncharacterized protein LOC101294250 [Fragaria vesca
subsp. vesca]
Length = 363
Score = 137 bits (346), Expect = 1e-30
Identities = 64/80 (80%), Positives = 74/80 (92%)
Frame = -2
Query: 240 KNPGNNLYVTGLSARVKERDIEKHFSTEGKVEDVHLVLDPWTRESRGFGFVTMSSVDEAD 61
+NPGNNLYVTGLS R+ R++EKHF++EGKV DVHLV+DPWTRESRGFGFVTM +V+ AD
Sbjct: 48 ENPGNNLYVTGLSPRITRRELEKHFASEGKVIDVHLVVDPWTRESRGFGFVTMENVNVAD 107
Query: 60 RCIKYLNRSVLEGRVITVEK 1
RCIKYL+RSVLEGRVITVEK
Sbjct: 108 RCIKYLDRSVLEGRVITVEK 127
>gb|EOY33816.1| RNA-binding family protein isoform 4 [Theobroma cacao]
Length = 385
Score = 137 bits (345), Expect = 1e-30
Identities = 63/80 (78%), Positives = 75/80 (93%)
Frame = -2
Query: 240 KNPGNNLYVTGLSARVKERDIEKHFSTEGKVEDVHLVLDPWTRESRGFGFVTMSSVDEAD 61
+NPGNNLYVTGLS R+ +R++EKHF++EG V DVHLV+DPWTRESRGFGFVTM++ +EA+
Sbjct: 42 ENPGNNLYVTGLSPRITKRELEKHFASEGNVIDVHLVVDPWTRESRGFGFVTMATNEEAE 101
Query: 60 RCIKYLNRSVLEGRVITVEK 1
RCIKYLNRSVLEGRVITVEK
Sbjct: 102 RCIKYLNRSVLEGRVITVEK 121
>gb|EOY33814.1| RNA-binding family protein isoform 2 [Theobroma cacao]
gi|508786559|gb|EOY33815.1| RNA-binding family protein
isoform 2 [Theobroma cacao]
Length = 131
Score = 137 bits (345), Expect = 1e-30
Identities = 63/80 (78%), Positives = 75/80 (93%)
Frame = -2
Query: 240 KNPGNNLYVTGLSARVKERDIEKHFSTEGKVEDVHLVLDPWTRESRGFGFVTMSSVDEAD 61
+NPGNNLYVTGLS R+ +R++EKHF++EG V DVHLV+DPWTRESRGFGFVTM++ +EA+
Sbjct: 42 ENPGNNLYVTGLSPRITKRELEKHFASEGNVIDVHLVVDPWTRESRGFGFVTMATNEEAE 101
Query: 60 RCIKYLNRSVLEGRVITVEK 1
RCIKYLNRSVLEGRVITVEK
Sbjct: 102 RCIKYLNRSVLEGRVITVEK 121