BLASTX nr result

ID: Atropa21_contig00035954 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00035954
         (451 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006350816.1| PREDICTED: serine/arginine repetitive matrix...   149   4e-34
ref|XP_004241182.1| PREDICTED: uncharacterized protein LOC101261...   149   5e-34
ref|XP_002520437.1| FUS-interacting serine-arginine-rich protein...   143   3e-32
ref|XP_006586189.1| PREDICTED: uncharacterized RNA-binding prote...   142   5e-32
ref|XP_003530834.1| PREDICTED: uncharacterized RNA-binding prote...   142   5e-32
gb|AFK47423.1| unknown [Medicago truncatula]                          141   1e-31
gb|ESW18714.1| hypothetical protein PHAVU_006G064000g [Phaseolus...   140   1e-31
gb|AFK40884.1| unknown [Lotus japonicus]                              140   2e-31
ref|XP_006425006.1| hypothetical protein CICLE_v10028652mg [Citr...   139   3e-31
ref|XP_002280779.2| PREDICTED: uncharacterized protein LOC100246...   139   3e-31
ref|XP_003551321.1| PREDICTED: pre-mRNA-splicing factor cwc22-li...   139   3e-31
emb|CBI16010.3| unnamed protein product [Vitis vinifera]              139   3e-31
emb|CAN63579.1| hypothetical protein VITISV_029585 [Vitis vinifera]   139   3e-31
ref|XP_002314126.1| transformer serine/arginine-rich ribonucleop...   138   9e-31
gb|EXC01499.1| Uncharacterized RNA-binding protein [Morus notabi...   137   1e-30
ref|XP_006649804.1| PREDICTED: scaffold attachment factor B2-lik...   137   1e-30
ref|XP_006649803.1| PREDICTED: scaffold attachment factor B2-lik...   137   1e-30
ref|XP_004294256.1| PREDICTED: uncharacterized protein LOC101294...   137   1e-30
gb|EOY33816.1| RNA-binding family protein isoform 4 [Theobroma c...   137   1e-30
gb|EOY33814.1| RNA-binding family protein isoform 2 [Theobroma c...   137   1e-30

>ref|XP_006350816.1| PREDICTED: serine/arginine repetitive matrix protein 2-like
           [Solanum tuberosum]
          Length = 385

 Score =  149 bits (376), Expect = 4e-34
 Identities = 72/80 (90%), Positives = 75/80 (93%)
 Frame = -2

Query: 240 KNPGNNLYVTGLSARVKERDIEKHFSTEGKVEDVHLVLDPWTRESRGFGFVTMSSVDEAD 61
           +NPGNNLYVTGLS RVKERD+EKHFS EGKVEDV LV DPWTRESRGFGFVTMSSV+EAD
Sbjct: 42  ENPGNNLYVTGLSTRVKERDVEKHFSAEGKVEDVRLVFDPWTRESRGFGFVTMSSVEEAD 101

Query: 60  RCIKYLNRSVLEGRVITVEK 1
           RCIK LNRSVLEGRVITVEK
Sbjct: 102 RCIKSLNRSVLEGRVITVEK 121


>ref|XP_004241182.1| PREDICTED: uncharacterized protein LOC101261529 [Solanum
           lycopersicum]
          Length = 386

 Score =  149 bits (375), Expect = 5e-34
 Identities = 72/80 (90%), Positives = 75/80 (93%)
 Frame = -2

Query: 240 KNPGNNLYVTGLSARVKERDIEKHFSTEGKVEDVHLVLDPWTRESRGFGFVTMSSVDEAD 61
           +NPGNNLYVTGLS RVKERDIEKHFS EGKVEDV LVLDPWT ESRGFGFVTMSSV+EAD
Sbjct: 42  ENPGNNLYVTGLSTRVKERDIEKHFSAEGKVEDVRLVLDPWTHESRGFGFVTMSSVEEAD 101

Query: 60  RCIKYLNRSVLEGRVITVEK 1
           RCIK LNRS+LEGRVITVEK
Sbjct: 102 RCIKSLNRSILEGRVITVEK 121


>ref|XP_002520437.1| FUS-interacting serine-arginine-rich protein 1, putative [Ricinus
           communis] gi|223540279|gb|EEF41850.1| FUS-interacting
           serine-arginine-rich protein 1, putative [Ricinus
           communis]
          Length = 399

 Score =  143 bits (360), Expect = 3e-32
 Identities = 67/80 (83%), Positives = 76/80 (95%)
 Frame = -2

Query: 240 KNPGNNLYVTGLSARVKERDIEKHFSTEGKVEDVHLVLDPWTRESRGFGFVTMSSVDEAD 61
           +NPGNNLYVTGLS R+ +RD+EKHF++EGKV DVHLV+DPWTRESRGFGFVTMS++ EAD
Sbjct: 43  ENPGNNLYVTGLSPRITKRDLEKHFASEGKVIDVHLVVDPWTRESRGFGFVTMSTLVEAD 102

Query: 60  RCIKYLNRSVLEGRVITVEK 1
           RCIKYLNRSVLEGRVITVEK
Sbjct: 103 RCIKYLNRSVLEGRVITVEK 122


>ref|XP_006586189.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01-like
           isoform X2 [Glycine max]
           gi|571474306|ref|XP_006586190.1| PREDICTED:
           uncharacterized RNA-binding protein C25G10.01-like
           isoform X3 [Glycine max]
          Length = 143

 Score =  142 bits (358), Expect = 5e-32
 Identities = 65/80 (81%), Positives = 75/80 (93%)
 Frame = -2

Query: 240 KNPGNNLYVTGLSARVKERDIEKHFSTEGKVEDVHLVLDPWTRESRGFGFVTMSSVDEAD 61
           +NPGNNLYVTGLS R+ +R++EKHFS EGKV DVHLV+DPWTRESRGFGFVTM +++EAD
Sbjct: 44  ENPGNNLYVTGLSPRITKRELEKHFSAEGKVIDVHLVVDPWTRESRGFGFVTMETLEEAD 103

Query: 60  RCIKYLNRSVLEGRVITVEK 1
           RC+KYLNRSVLEGRVITVEK
Sbjct: 104 RCVKYLNRSVLEGRVITVEK 123


>ref|XP_003530834.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01-like
           isoform X1 [Glycine max]
          Length = 362

 Score =  142 bits (358), Expect = 5e-32
 Identities = 65/80 (81%), Positives = 75/80 (93%)
 Frame = -2

Query: 240 KNPGNNLYVTGLSARVKERDIEKHFSTEGKVEDVHLVLDPWTRESRGFGFVTMSSVDEAD 61
           +NPGNNLYVTGLS R+ +R++EKHFS EGKV DVHLV+DPWTRESRGFGFVTM +++EAD
Sbjct: 44  ENPGNNLYVTGLSPRITKRELEKHFSAEGKVIDVHLVVDPWTRESRGFGFVTMETLEEAD 103

Query: 60  RCIKYLNRSVLEGRVITVEK 1
           RC+KYLNRSVLEGRVITVEK
Sbjct: 104 RCVKYLNRSVLEGRVITVEK 123


>gb|AFK47423.1| unknown [Medicago truncatula]
          Length = 340

 Score =  141 bits (355), Expect = 1e-31
 Identities = 64/80 (80%), Positives = 75/80 (93%)
 Frame = -2

Query: 240 KNPGNNLYVTGLSARVKERDIEKHFSTEGKVEDVHLVLDPWTRESRGFGFVTMSSVDEAD 61
           +NPGNNLYVTGLS R+ +R++EKHFS +GKV DVHLV+DPWTRESRGFGFVTM +++EAD
Sbjct: 41  ENPGNNLYVTGLSPRITKRELEKHFSAKGKVVDVHLVVDPWTRESRGFGFVTMDTLEEAD 100

Query: 60  RCIKYLNRSVLEGRVITVEK 1
           RC+KYLNRSVLEGRVITVEK
Sbjct: 101 RCVKYLNRSVLEGRVITVEK 120


>gb|ESW18714.1| hypothetical protein PHAVU_006G064000g [Phaseolus vulgaris]
          Length = 369

 Score =  140 bits (354), Expect = 1e-31
 Identities = 64/80 (80%), Positives = 74/80 (92%)
 Frame = -2

Query: 240 KNPGNNLYVTGLSARVKERDIEKHFSTEGKVEDVHLVLDPWTRESRGFGFVTMSSVDEAD 61
           +NPGNNLYVTGLS R+ +R++EKHF+ EGKV DVHLV+DPWTRESRGFGFVTM +V+ AD
Sbjct: 48  ENPGNNLYVTGLSPRITKRELEKHFAAEGKVRDVHLVVDPWTRESRGFGFVTMETVEVAD 107

Query: 60  RCIKYLNRSVLEGRVITVEK 1
           RC+KYLNRSVLEGRVITVEK
Sbjct: 108 RCVKYLNRSVLEGRVITVEK 127


>gb|AFK40884.1| unknown [Lotus japonicus]
          Length = 344

 Score =  140 bits (352), Expect = 2e-31
 Identities = 63/80 (78%), Positives = 76/80 (95%)
 Frame = -2

Query: 240 KNPGNNLYVTGLSARVKERDIEKHFSTEGKVEDVHLVLDPWTRESRGFGFVTMSSVDEAD 61
           +NPGNNLYVTGLS R+ +R++EKHF+TEGKV DVHLV+DPWTRESRGFGFVTM ++++A+
Sbjct: 44  ENPGNNLYVTGLSPRITKRELEKHFATEGKVIDVHLVVDPWTRESRGFGFVTMDTLEDAN 103

Query: 60  RCIKYLNRSVLEGRVITVEK 1
           RC+KYLNRSVLEGRVITVEK
Sbjct: 104 RCVKYLNRSVLEGRVITVEK 123


>ref|XP_006425006.1| hypothetical protein CICLE_v10028652mg [Citrus clementina]
           gi|568870553|ref|XP_006488466.1| PREDICTED:
           uncharacterized RNA-binding protein C25G10.01-like
           isoform X1 [Citrus sinensis] gi|557526940|gb|ESR38246.1|
           hypothetical protein CICLE_v10028652mg [Citrus
           clementina]
          Length = 381

 Score =  139 bits (351), Expect = 3e-31
 Identities = 63/80 (78%), Positives = 76/80 (95%)
 Frame = -2

Query: 240 KNPGNNLYVTGLSARVKERDIEKHFSTEGKVEDVHLVLDPWTRESRGFGFVTMSSVDEAD 61
           +NPGNNLYVTGLS R+ +R++EKHF+ EGKV DVHLV+DPWTRESRGFGFVTM++V+EAD
Sbjct: 40  ENPGNNLYVTGLSPRITKRELEKHFAAEGKVIDVHLVVDPWTRESRGFGFVTMATVEEAD 99

Query: 60  RCIKYLNRSVLEGRVITVEK 1
           RCIKYL+RSVLEGR+ITVE+
Sbjct: 100 RCIKYLDRSVLEGRIITVER 119


>ref|XP_002280779.2| PREDICTED: uncharacterized protein LOC100246735 [Vitis vinifera]
          Length = 330

 Score =  139 bits (351), Expect = 3e-31
 Identities = 65/80 (81%), Positives = 75/80 (93%)
 Frame = -2

Query: 240 KNPGNNLYVTGLSARVKERDIEKHFSTEGKVEDVHLVLDPWTRESRGFGFVTMSSVDEAD 61
           +NPGNNLYVTGLS RV +R++EKHF++EG V DVHLV DPWTRESRGFGFVTMS+V+EA+
Sbjct: 45  ENPGNNLYVTGLSTRVTKRELEKHFASEGSVADVHLVTDPWTRESRGFGFVTMSTVEEAN 104

Query: 60  RCIKYLNRSVLEGRVITVEK 1
           RCIKYL+RSVLEGRVITVEK
Sbjct: 105 RCIKYLDRSVLEGRVITVEK 124


>ref|XP_003551321.1| PREDICTED: pre-mRNA-splicing factor cwc22-like [Glycine max]
          Length = 364

 Score =  139 bits (351), Expect = 3e-31
 Identities = 63/80 (78%), Positives = 75/80 (93%)
 Frame = -2

Query: 240 KNPGNNLYVTGLSARVKERDIEKHFSTEGKVEDVHLVLDPWTRESRGFGFVTMSSVDEAD 61
           +NPGNNLYVTGLS R+ +R++EKHF+ EGKV DVHLV+DPWTRESRGFGFVTM +++EA+
Sbjct: 46  ENPGNNLYVTGLSPRITKRELEKHFAAEGKVIDVHLVVDPWTRESRGFGFVTMETLEEAE 105

Query: 60  RCIKYLNRSVLEGRVITVEK 1
           RC+KYLNRSVLEGRVITVEK
Sbjct: 106 RCVKYLNRSVLEGRVITVEK 125


>emb|CBI16010.3| unnamed protein product [Vitis vinifera]
          Length = 198

 Score =  139 bits (351), Expect = 3e-31
 Identities = 65/80 (81%), Positives = 75/80 (93%)
 Frame = -2

Query: 240 KNPGNNLYVTGLSARVKERDIEKHFSTEGKVEDVHLVLDPWTRESRGFGFVTMSSVDEAD 61
           +NPGNNLYVTGLS RV +R++EKHF++EG V DVHLV DPWTRESRGFGFVTMS+V+EA+
Sbjct: 45  ENPGNNLYVTGLSTRVTKRELEKHFASEGSVADVHLVTDPWTRESRGFGFVTMSTVEEAN 104

Query: 60  RCIKYLNRSVLEGRVITVEK 1
           RCIKYL+RSVLEGRVITVEK
Sbjct: 105 RCIKYLDRSVLEGRVITVEK 124


>emb|CAN63579.1| hypothetical protein VITISV_029585 [Vitis vinifera]
          Length = 241

 Score =  139 bits (351), Expect = 3e-31
 Identities = 65/80 (81%), Positives = 75/80 (93%)
 Frame = -2

Query: 240 KNPGNNLYVTGLSARVKERDIEKHFSTEGKVEDVHLVLDPWTRESRGFGFVTMSSVDEAD 61
           +NPGNNLYVTGLS RV +R++EKHF++EG V DVHLV DPWTRESRGFGFVTMS+V+EA+
Sbjct: 45  ENPGNNLYVTGLSTRVTKRELEKHFASEGSVADVHLVTDPWTRESRGFGFVTMSTVEEAN 104

Query: 60  RCIKYLNRSVLEGRVITVEK 1
           RCIKYL+RSVLEGRVITVEK
Sbjct: 105 RCIKYLDRSVLEGRVITVEK 124


>ref|XP_002314126.1| transformer serine/arginine-rich ribonucleoprotein [Populus
           trichocarpa] gi|222850534|gb|EEE88081.1| transformer
           serine/arginine-rich ribonucleoprotein [Populus
           trichocarpa]
          Length = 316

 Score =  138 bits (347), Expect = 9e-31
 Identities = 64/80 (80%), Positives = 74/80 (92%)
 Frame = -2

Query: 240 KNPGNNLYVTGLSARVKERDIEKHFSTEGKVEDVHLVLDPWTRESRGFGFVTMSSVDEAD 61
           +NPGNNLYVTGLS R+ ++++EKHFS EG V DVHLV+DPWTRESRGFGFVTMS+V+EAD
Sbjct: 48  ENPGNNLYVTGLSPRITKKELEKHFSAEGTVIDVHLVVDPWTRESRGFGFVTMSTVEEAD 107

Query: 60  RCIKYLNRSVLEGRVITVEK 1
            CIKYL+RSVLEGRVITVEK
Sbjct: 108 HCIKYLDRSVLEGRVITVEK 127


>gb|EXC01499.1| Uncharacterized RNA-binding protein [Morus notabilis]
          Length = 492

 Score =  137 bits (346), Expect = 1e-30
 Identities = 66/79 (83%), Positives = 74/79 (93%)
 Frame = -2

Query: 237 NPGNNLYVTGLSARVKERDIEKHFSTEGKVEDVHLVLDPWTRESRGFGFVTMSSVDEADR 58
           NPGNNLYVTGLS R+ +R++EKHF TEGKV DVHLV+DP TRESRGFGFV+MSSV+EADR
Sbjct: 144 NPGNNLYVTGLSPRITKRELEKHFVTEGKVVDVHLVVDPCTRESRGFGFVSMSSVEEADR 203

Query: 57  CIKYLNRSVLEGRVITVEK 1
           CIKYL+RSVLEGRVITVEK
Sbjct: 204 CIKYLDRSVLEGRVITVEK 222


>ref|XP_006649804.1| PREDICTED: scaffold attachment factor B2-like isoform X2 [Oryza
           brachyantha]
          Length = 126

 Score =  137 bits (346), Expect = 1e-30
 Identities = 65/80 (81%), Positives = 74/80 (92%)
 Frame = -2

Query: 240 KNPGNNLYVTGLSARVKERDIEKHFSTEGKVEDVHLVLDPWTRESRGFGFVTMSSVDEAD 61
           +NPGNNLYVTGLSARV +RD+EKHFSTEG+V D  +VLDPWTRESRGFGFVTM++V+EA 
Sbjct: 40  ENPGNNLYVTGLSARVTDRDLEKHFSTEGEVIDASIVLDPWTRESRGFGFVTMATVEEAG 99

Query: 60  RCIKYLNRSVLEGRVITVEK 1
           RCIKYL+ SVLEGRVITVEK
Sbjct: 100 RCIKYLDHSVLEGRVITVEK 119


>ref|XP_006649803.1| PREDICTED: scaffold attachment factor B2-like isoform X1 [Oryza
           brachyantha]
          Length = 340

 Score =  137 bits (346), Expect = 1e-30
 Identities = 65/80 (81%), Positives = 74/80 (92%)
 Frame = -2

Query: 240 KNPGNNLYVTGLSARVKERDIEKHFSTEGKVEDVHLVLDPWTRESRGFGFVTMSSVDEAD 61
           +NPGNNLYVTGLSARV +RD+EKHFSTEG+V D  +VLDPWTRESRGFGFVTM++V+EA 
Sbjct: 40  ENPGNNLYVTGLSARVTDRDLEKHFSTEGEVIDASIVLDPWTRESRGFGFVTMATVEEAG 99

Query: 60  RCIKYLNRSVLEGRVITVEK 1
           RCIKYL+ SVLEGRVITVEK
Sbjct: 100 RCIKYLDHSVLEGRVITVEK 119


>ref|XP_004294256.1| PREDICTED: uncharacterized protein LOC101294250 [Fragaria vesca
           subsp. vesca]
          Length = 363

 Score =  137 bits (346), Expect = 1e-30
 Identities = 64/80 (80%), Positives = 74/80 (92%)
 Frame = -2

Query: 240 KNPGNNLYVTGLSARVKERDIEKHFSTEGKVEDVHLVLDPWTRESRGFGFVTMSSVDEAD 61
           +NPGNNLYVTGLS R+  R++EKHF++EGKV DVHLV+DPWTRESRGFGFVTM +V+ AD
Sbjct: 48  ENPGNNLYVTGLSPRITRRELEKHFASEGKVIDVHLVVDPWTRESRGFGFVTMENVNVAD 107

Query: 60  RCIKYLNRSVLEGRVITVEK 1
           RCIKYL+RSVLEGRVITVEK
Sbjct: 108 RCIKYLDRSVLEGRVITVEK 127


>gb|EOY33816.1| RNA-binding family protein isoform 4 [Theobroma cacao]
          Length = 385

 Score =  137 bits (345), Expect = 1e-30
 Identities = 63/80 (78%), Positives = 75/80 (93%)
 Frame = -2

Query: 240 KNPGNNLYVTGLSARVKERDIEKHFSTEGKVEDVHLVLDPWTRESRGFGFVTMSSVDEAD 61
           +NPGNNLYVTGLS R+ +R++EKHF++EG V DVHLV+DPWTRESRGFGFVTM++ +EA+
Sbjct: 42  ENPGNNLYVTGLSPRITKRELEKHFASEGNVIDVHLVVDPWTRESRGFGFVTMATNEEAE 101

Query: 60  RCIKYLNRSVLEGRVITVEK 1
           RCIKYLNRSVLEGRVITVEK
Sbjct: 102 RCIKYLNRSVLEGRVITVEK 121


>gb|EOY33814.1| RNA-binding family protein isoform 2 [Theobroma cacao]
           gi|508786559|gb|EOY33815.1| RNA-binding family protein
           isoform 2 [Theobroma cacao]
          Length = 131

 Score =  137 bits (345), Expect = 1e-30
 Identities = 63/80 (78%), Positives = 75/80 (93%)
 Frame = -2

Query: 240 KNPGNNLYVTGLSARVKERDIEKHFSTEGKVEDVHLVLDPWTRESRGFGFVTMSSVDEAD 61
           +NPGNNLYVTGLS R+ +R++EKHF++EG V DVHLV+DPWTRESRGFGFVTM++ +EA+
Sbjct: 42  ENPGNNLYVTGLSPRITKRELEKHFASEGNVIDVHLVVDPWTRESRGFGFVTMATNEEAE 101

Query: 60  RCIKYLNRSVLEGRVITVEK 1
           RCIKYLNRSVLEGRVITVEK
Sbjct: 102 RCIKYLNRSVLEGRVITVEK 121


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