BLASTX nr result
ID: Atropa21_contig00035933
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00035933
(761 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein A... 60 7e-20
ref|XP_006343440.1| PREDICTED: uncharacterized protein LOC102595... 69 2e-14
ref|XP_006338209.1| PREDICTED: putative ribonuclease H protein A... 54 4e-14
ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein A... 60 4e-11
ref|XP_006354689.1| PREDICTED: uncharacterized protein LOC102605... 57 5e-10
ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596... 51 8e-09
ref|XP_006355175.1| PREDICTED: putative ribonuclease H protein A... 52 9e-09
ref|XP_006338863.1| PREDICTED: uncharacterized protein LOC102579... 52 1e-08
ref|XP_004233852.1| PREDICTED: uncharacterized protein LOC101253... 48 8e-08
>ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 885
Score = 60.5 bits (145), Expect(3) = 7e-20
Identities = 32/72 (44%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Frame = -2
Query: 742 WSDLIQMMKGGRARLKVTKMVWNHLPTC*YI-CNTDGPSRGNLRRSAYRFCLRDTLGDLI 566
W +IQ + + ++ V ++ W P Y+ NTDG RGN S++ FC+RD GDLI
Sbjct: 679 WQAIIQRLNQYKRKIHVLRVTWKP-PDDHYVKSNTDGACRGNPGLSSFGFCIRDDKGDLI 737
Query: 565 YAKAEDIGYATN 530
YAKA+ IG ATN
Sbjct: 738 YAKAKGIGIATN 749
Score = 42.0 bits (97), Expect(3) = 7e-20
Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = -1
Query: 332 YILRERKKFIDSLANQALD-KGSFQCHTFQDLKIDMRRILNTDKS*IPYLIIRVQ 171
+I RE DSLAN A++ + Q FQ+L + RRILN DK+ IP L IR +
Sbjct: 815 HIFREGNSLADSLANIAIESQAEHQYSCFQELPLKERRILNIDKAQIPTLRIRTR 869
Score = 41.6 bits (96), Expect(3) = 7e-20
Identities = 21/47 (44%), Positives = 29/47 (61%)
Frame = -3
Query: 528 LEAETTAITEALRYFKGRYLNNFIIQTDSQMVQKILSRGWKPP*NIA 388
+EAET AI ALR R + II+TDS ++KI+ + W+ P IA
Sbjct: 750 MEAETVAILTALRECSNRKMQKVIIETDSLSLKKIIQQTWRVPWKIA 796
>ref|XP_006343440.1| PREDICTED: uncharacterized protein LOC102595406 [Solanum tuberosum]
Length = 866
Score = 69.3 bits (168), Expect(2) = 2e-14
Identities = 31/77 (40%), Positives = 49/77 (63%)
Frame = -2
Query: 751 PNRWSDLIQMMKGGRARLKVTKMVWNHLPTC*YICNTDGPSRGNLRRSAYRFCLRDTLGD 572
P WSD+++ ++ + R+ K++W + CNTDG S+GN +S+Y +CLRD G+
Sbjct: 710 PTNWSDMVKFLENYKPRIYYKKIIWMPPNSNTRKCNTDGASKGNPGKSSYAYCLRDQEGN 769
Query: 571 LIYAKAEDIGYATNTRS 521
LIYA+AE+I TN +
Sbjct: 770 LIYAQAEEIPETTNVEA 786
Score = 36.6 bits (83), Expect(2) = 2e-14
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = -3
Query: 528 LEAETTAITEALRYFKGRYLNNFIIQTDSQMVQKILSRGWKPP*NIAI 385
+EAE AI EA+ + R + I+TDS +++ IL W+ P NI I
Sbjct: 784 VEAEAVAIKEAIYHCTTRGFSRVTIETDSLLLKNILQGNWEIPWNIRI 831
>ref|XP_006338209.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 198
Score = 53.9 bits (128), Expect(3) = 4e-14
Identities = 28/71 (39%), Positives = 42/71 (59%)
Frame = -2
Query: 733 LIQMMKGGRARLKVTKMVWNHLPTC*YICNTDGPSRGNLRRSAYRFCLRDTLGDLIYAKA 554
+I+ + ++RL + W+ CNTDG S+GN SAY +CLR++ GDLI+ A
Sbjct: 1 MIRRLGANKSRLYHCTVRWDAPHEDVIKCNTDGASKGNPGISAYGYCLRNSNGDLIHVTA 60
Query: 553 EDIGYATNTRS 521
E+IG TN +
Sbjct: 61 ENIGITTNVEA 71
Score = 38.1 bits (87), Expect(3) = 4e-14
Identities = 16/41 (39%), Positives = 27/41 (65%)
Frame = -3
Query: 528 LEAETTAITEALRYFKGRYLNNFIIQTDSQMVQKILSRGWK 406
+EAE AI EA+RY + + I+++DS ++ KI++ WK
Sbjct: 69 VEAEMRAILEAIRYCVNKKMRKIILESDSLLMVKIINEAWK 109
Score = 32.3 bits (72), Expect(3) = 4e-14
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Frame = -1
Query: 332 YILRERKKFIDSLANQAL---DKGSFQCHTFQDLKIDMRRILNTDKS*IPYLIIRVQR 168
+I RE K D LAN A+ +K +F +FQ L R+I+N +K+ IP L R +R
Sbjct: 134 HIYREGNKLADYLANLAINSTEKKTFS--SFQQLPSLGRKIINMEKAQIPSLRCRTKR 189
>ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 1035
Score = 60.1 bits (144), Expect(2) = 4e-11
Identities = 28/71 (39%), Positives = 41/71 (57%)
Frame = -2
Query: 742 WSDLIQMMKGGRARLKVTKMVWNHLPTC*YICNTDGPSRGNLRRSAYRFCLRDTLGDLIY 563
W ++ M++ + L + W CNTDG S+GN R S+Y +C+RD GDL+Y
Sbjct: 650 WPQVVGMLQNYKPPLHYKVVRWRKPSEGWVTCNTDGASKGNPRMSSYGYCIRDKNGDLLY 709
Query: 562 AKAEDIGYATN 530
A+A +IG TN
Sbjct: 710 AEAHNIGETTN 720
Score = 34.3 bits (77), Expect(2) = 4e-11
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = -3
Query: 528 LEAETTAITEALRYFKGRYLNNFIIQTDSQMVQKILSRGWKPP 400
+EAE T + +AL++ L ++TDS +Q +++R WK P
Sbjct: 721 MEAEATTVWKALQFCYENGLRKVRLETDSLALQNMITRSWKIP 763
>ref|XP_006354689.1| PREDICTED: uncharacterized protein LOC102605437 [Solanum tuberosum]
Length = 333
Score = 56.6 bits (135), Expect(2) = 5e-10
Identities = 27/76 (35%), Positives = 44/76 (57%)
Frame = -2
Query: 757 NIPNRWSDLIQMMKGGRARLKVTKMVWNHLPTC*YICNTDGPSRGNLRRSAYRFCLRDTL 578
+ P +WSD++ ++ + +L + W P CNTD SR N S+Y FCLR+++
Sbjct: 134 DFPTKWSDIVACLEKHKPKLYYLPVCWKP-PEGILTCNTDVASRCNPEISSYGFCLRNSV 192
Query: 577 GDLIYAKAEDIGYATN 530
GDL+Y + ++I TN
Sbjct: 193 GDLVYVQGKEIQEGTN 208
Score = 34.3 bits (77), Expect(2) = 5e-10
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = -3
Query: 528 LEAETTAITEALRYFKGRYLNNFIIQTDSQMVQKILSRGWKPP*NIAI 385
LE E AI E L + + + ++TDSQ++ KIL+R W+ P +I +
Sbjct: 209 LEVEAVAIREDLAHCVTKGVMKACLETDSQVLIKILTRIWEVPWSIVV 256
>ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596481 [Solanum tuberosum]
Length = 1135
Score = 50.8 bits (120), Expect(2) = 8e-09
Identities = 24/40 (60%), Positives = 29/40 (72%)
Frame = -2
Query: 649 CNTDGPSRGNLRRSAYRFCLRDTLGDLIYAKAEDIGYATN 530
CNTDG +RGN S+ F +RD GDLIYA+A+ IG ATN
Sbjct: 1046 CNTDGAARGNSGASSTSFVVRDEEGDLIYARAKGIGIATN 1085
Score = 35.8 bits (81), Expect(2) = 8e-09
Identities = 17/43 (39%), Positives = 28/43 (65%)
Frame = -3
Query: 528 LEAETTAITEALRYFKGRYLNNFIIQTDSQMVQKILSRGWKPP 400
+EAE A+ EA+ Y + + L II+TDS +++K++ WK P
Sbjct: 1086 MEAEALALLEAVWYCQEKDLKEPIIETDSLVLKKMVDNQWKIP 1128
>ref|XP_006355175.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 143
Score = 52.0 bits (123), Expect(2) = 9e-09
Identities = 21/40 (52%), Positives = 30/40 (75%)
Frame = -2
Query: 649 CNTDGPSRGNLRRSAYRFCLRDTLGDLIYAKAEDIGYATN 530
CNTDG S+GN +S+Y FC+R+ G+L+YA+ + IG TN
Sbjct: 29 CNTDGASKGNPDQSSYGFCIRNHTGELLYAEVQSIGVTTN 68
Score = 34.7 bits (78), Expect(2) = 9e-09
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = -3
Query: 528 LEAETTAITEALRYFKGRYLNNFIIQTDSQMVQKILSRGWKPP 400
++AE+ AI +AL+Y + ++TDS ++ IL R WK P
Sbjct: 69 MDAESMAIWKALQYCLSQGFQQVSLETDSLTLKNILVRNWKTP 111
>ref|XP_006338863.1| PREDICTED: uncharacterized protein LOC102579795 [Solanum tuberosum]
Length = 778
Score = 52.0 bits (123), Expect(2) = 1e-08
Identities = 26/76 (34%), Positives = 42/76 (55%)
Frame = -2
Query: 757 NIPNRWSDLIQMMKGGRARLKVTKMVWNHLPTC*YICNTDGPSRGNLRRSAYRFCLRDTL 578
NIP WS +++ + + L + W Y CNTD S+GN R SA FC+R+
Sbjct: 105 NIPKDWSMMVKFFENYISVLATKVIYWVPPNMGVYKCNTDCASKGNPRPSAGGFCIRNWN 164
Query: 577 GDLIYAKAEDIGYATN 530
G+ IY ++++G+ T+
Sbjct: 165 GEFIYTTSQELGFKTS 180
Score = 34.3 bits (77), Expect(2) = 1e-08
Identities = 21/54 (38%), Positives = 30/54 (55%)
Frame = -3
Query: 528 LEAETTAITEALRYFKGRYLNNFIIQTDSQMVQKILSRGWKPP*NIAIFGWIKK 367
LEAE A L++ L I++TDS +V KIL W+ P +I++ IKK
Sbjct: 181 LEAEVIAFERGLQFCMSHNLLPVILETDSLIVSKILDGIWETPWSISLL--IKK 232
>ref|XP_004233852.1| PREDICTED: uncharacterized protein LOC101253557 [Solanum
lycopersicum]
Length = 13995
Score = 47.8 bits (112), Expect(2) = 8e-08
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Frame = -2
Query: 757 NIPNRWSDLIQMMKGGRARLKVTKMVWNHLPTC*YICNTDGPSRGNLRRSAYRFCLRDTL 578
++P W +++ + + KVTK++W T TD RRS++ FC+RD
Sbjct: 3147 HVPYNWRIVVEALNNYNLKAKVTKVIWKAPDTGQIKIKTDP------RRSSWVFCVRDEQ 3200
Query: 577 GDLIYAKAEDIG--YATNTRS 521
GD++ A+A++IG TNT++
Sbjct: 3201 GDILQAQAQEIGELACTNTQA 3221
Score = 35.4 bits (80), Expect(2) = 8e-08
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = -3
Query: 525 EAETTAITEALRYFKGRYLNNFIIQTDSQMVQKILSRGWKPP*NIAIF 382
+AE AI +AL++ + ++ +I+TDS + I+ + WK I IF
Sbjct: 3220 QAEAMAILQALKFIEATQMDRVVIKTDSLLTNNIVDKSWKRLRLIEIF 3267