BLASTX nr result
ID: Atropa21_contig00035868
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00035868
(553 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004241021.1| PREDICTED: DNA repair protein XRCC4-like iso... 154 1e-35
ref|XP_006350671.1| PREDICTED: DNA repair protein XRCC4-like iso... 154 2e-35
gb|EMJ27301.1| hypothetical protein PRUPE_ppa010906mg [Prunus pe... 135 7e-30
ref|XP_006489536.1| PREDICTED: DNA repair protein XRCC4-like [Ci... 133 3e-29
gb|EXB29874.1| DNA repair protein XRCC4 [Morus notabilis] 131 1e-28
ref|XP_002517008.1| DNA-repair protein XRCC4, putative [Ricinus ... 130 2e-28
ref|XP_006420162.1| hypothetical protein CICLE_v10005690mg [Citr... 129 4e-28
ref|XP_006378355.1| hypothetical protein POPTR_0010s08650g [Popu... 129 5e-28
ref|XP_002284388.2| PREDICTED: DNA repair protein XRCC4 [Vitis v... 129 5e-28
ref|XP_002315726.1| predicted protein [Populus trichocarpa] 129 5e-28
emb|CBI26376.3| unnamed protein product [Vitis vinifera] 129 5e-28
ref|XP_006420167.1| hypothetical protein CICLE_v10005689mg [Citr... 129 6e-28
dbj|BAF03494.1| XRCC4 homolog [Populus nigra] 127 1e-27
ref|XP_006420172.1| hypothetical protein CICLE_v10007171mg, part... 127 2e-27
ref|XP_004290387.1| PREDICTED: DNA repair protein XRCC4-like iso... 127 2e-27
ref|XP_004290386.1| PREDICTED: DNA repair protein XRCC4-like iso... 127 2e-27
ref|XP_002883399.1| hypothetical protein ARALYDRAFT_479818 [Arab... 125 7e-27
ref|XP_006298402.1| hypothetical protein CARUB_v10014474mg [Caps... 124 2e-26
ref|NP_188951.2| DNA repair protein XRCC4-like protein [Arabidop... 123 3e-26
dbj|BAD43030.1| putative double strand break repair protein (XRC... 123 3e-26
>ref|XP_004241021.1| PREDICTED: DNA repair protein XRCC4-like isoform 1 [Solanum
lycopersicum]
Length = 254
Score = 154 bits (390), Expect = 1e-35
Identities = 75/86 (87%), Positives = 78/86 (90%), Gaps = 3/86 (3%)
Frame = +1
Query: 1 SEEEVEERASQ---PVSEYIDLGDK*LGFQQPGSIYGFDDADTGHKRLAWTFEKEGTKLE 171
SEEEVEERASQ PVSEYIDLG+K LGFQQPGS+YGFDDA TGHKRL+WTFEKEGTKLE
Sbjct: 48 SEEEVEERASQWDQPVSEYIDLGEKYLGFQQPGSVYGFDDAGTGHKRLSWTFEKEGTKLE 107
Query: 172 WRWKCQPSPNSKKTTASILDFLMDAN 249
WRWKCQ S NSKKTTA ILDFLMDAN
Sbjct: 108 WRWKCQSSSNSKKTTADILDFLMDAN 133
>ref|XP_006350671.1| PREDICTED: DNA repair protein XRCC4-like isoform X1 [Solanum
tuberosum]
Length = 267
Score = 154 bits (388), Expect = 2e-35
Identities = 75/86 (87%), Positives = 77/86 (89%), Gaps = 3/86 (3%)
Frame = +1
Query: 1 SEEEVEERASQ---PVSEYIDLGDK*LGFQQPGSIYGFDDADTGHKRLAWTFEKEGTKLE 171
SEEEVEERASQ PVSEYIDL +K LGFQQPGS YGFDDA TGHKRL+WTFEKEGTKLE
Sbjct: 48 SEEEVEERASQWDQPVSEYIDLAEKYLGFQQPGSAYGFDDAGTGHKRLSWTFEKEGTKLE 107
Query: 172 WRWKCQPSPNSKKTTASILDFLMDAN 249
WRWKCQPS NSKKTTA ILDFLMDAN
Sbjct: 108 WRWKCQPSSNSKKTTADILDFLMDAN 133
>gb|EMJ27301.1| hypothetical protein PRUPE_ppa010906mg [Prunus persica]
Length = 231
Score = 135 bits (340), Expect = 7e-30
Identities = 63/86 (73%), Positives = 73/86 (84%), Gaps = 3/86 (3%)
Frame = +1
Query: 1 SEEEVEERASQ---PVSEYIDLGDK*LGFQQPGSIYGFDDADTGHKRLAWTFEKEGTKLE 171
SEE+V +RA+Q PVSEY+ L ++ LGFQ P S YGF DA GHKRL+WTFEKEGTKLE
Sbjct: 101 SEEQVRDRAAQWDQPVSEYVALAERYLGFQHPDSAYGFADAGDGHKRLSWTFEKEGTKLE 160
Query: 172 WRWKCQPSPNSKKTTASILDFLMDAN 249
WRWKCQPSPNSK+TTA++LDFLMDAN
Sbjct: 161 WRWKCQPSPNSKQTTAAVLDFLMDAN 186
>ref|XP_006489536.1| PREDICTED: DNA repair protein XRCC4-like [Citrus sinensis]
Length = 256
Score = 133 bits (334), Expect = 3e-29
Identities = 63/86 (73%), Positives = 73/86 (84%), Gaps = 3/86 (3%)
Frame = +1
Query: 1 SEEEVEERASQ---PVSEYIDLGDK*LGFQQPGSIYGFDDADTGHKRLAWTFEKEGTKLE 171
SEE+V++RA+Q PV+EYI L ++ LGFQQPGS+YGF DA G KRL+WTFEKEGTKLE
Sbjct: 46 SEEQVKDRAAQWDQPVTEYIKLAERYLGFQQPGSVYGFTDAADGCKRLSWTFEKEGTKLE 105
Query: 172 WRWKCQPSPNSKKTTASILDFLMDAN 249
WRWKC P+PNSKK TA ILDFLMDAN
Sbjct: 106 WRWKCGPAPNSKKVTAGILDFLMDAN 131
>gb|EXB29874.1| DNA repair protein XRCC4 [Morus notabilis]
Length = 257
Score = 131 bits (329), Expect = 1e-28
Identities = 61/86 (70%), Positives = 71/86 (82%), Gaps = 3/86 (3%)
Frame = +1
Query: 1 SEEEVEERASQ---PVSEYIDLGDK*LGFQQPGSIYGFDDADTGHKRLAWTFEKEGTKLE 171
SEEEV +RA+Q PV EY+ L ++ LGFQQP S+Y F DA GHKRL+WTFEKEGTKL+
Sbjct: 47 SEEEVRDRAAQWDQPVPEYVALAERYLGFQQPDSVYAFADAGDGHKRLSWTFEKEGTKLQ 106
Query: 172 WRWKCQPSPNSKKTTASILDFLMDAN 249
WRWKCQP+P+SKKTTA LDFLMDAN
Sbjct: 107 WRWKCQPAPDSKKTTAETLDFLMDAN 132
>ref|XP_002517008.1| DNA-repair protein XRCC4, putative [Ricinus communis]
gi|223543643|gb|EEF45171.1| DNA-repair protein XRCC4,
putative [Ricinus communis]
Length = 265
Score = 130 bits (328), Expect = 2e-28
Identities = 63/86 (73%), Positives = 72/86 (83%), Gaps = 3/86 (3%)
Frame = +1
Query: 1 SEEEVEERASQ---PVSEYIDLGDK*LGFQQPGSIYGFDDADTGHKRLAWTFEKEGTKLE 171
+E +V+ERA+Q PVSEYI+L + LGFQQPGSIY F DA HKRL+WTFEKEGTKLE
Sbjct: 53 TEGQVKERAAQWDQPVSEYINLAEHYLGFQQPGSIYRFADAGDSHKRLSWTFEKEGTKLE 112
Query: 172 WRWKCQPSPNSKKTTASILDFLMDAN 249
WRWKCQPSP++K TTA ILDFLMDAN
Sbjct: 113 WRWKCQPSPDNKMTTAGILDFLMDAN 138
>ref|XP_006420162.1| hypothetical protein CICLE_v10005690mg [Citrus clementina]
gi|557522035|gb|ESR33402.1| hypothetical protein
CICLE_v10005690mg [Citrus clementina]
Length = 256
Score = 129 bits (325), Expect = 4e-28
Identities = 61/86 (70%), Positives = 72/86 (83%), Gaps = 3/86 (3%)
Frame = +1
Query: 1 SEEEVEERAS---QPVSEYIDLGDK*LGFQQPGSIYGFDDADTGHKRLAWTFEKEGTKLE 171
SEE+V++RA+ QPV+EY+ L ++ LGFQQPGS+YGF DA G KRL+WTFEKEGTKLE
Sbjct: 47 SEEQVKDRAALWDQPVTEYVKLAERYLGFQQPGSVYGFTDAADGCKRLSWTFEKEGTKLE 106
Query: 172 WRWKCQPSPNSKKTTASILDFLMDAN 249
WRWKC +PNSKK TA ILDFLMDAN
Sbjct: 107 WRWKCGSAPNSKKVTAGILDFLMDAN 132
>ref|XP_006378355.1| hypothetical protein POPTR_0010s08650g [Populus trichocarpa]
gi|550329386|gb|ERP56152.1| hypothetical protein
POPTR_0010s08650g [Populus trichocarpa]
Length = 483
Score = 129 bits (324), Expect = 5e-28
Identities = 62/86 (72%), Positives = 71/86 (82%), Gaps = 3/86 (3%)
Frame = +1
Query: 1 SEEEVEERASQ---PVSEYIDLGDK*LGFQQPGSIYGFDDADTGHKRLAWTFEKEGTKLE 171
+EEEV +RA+Q PVS YI L +K LGFQ PGS+Y F DA G+KRL+WTFEKEGTKLE
Sbjct: 46 TEEEVRDRAAQWDQPVSTYIQLAEKHLGFQIPGSVYKFTDAGEGNKRLSWTFEKEGTKLE 105
Query: 172 WRWKCQPSPNSKKTTASILDFLMDAN 249
WRWKCQPSP++KKTT ILDFLMDAN
Sbjct: 106 WRWKCQPSPDTKKTTTLILDFLMDAN 131
>ref|XP_002284388.2| PREDICTED: DNA repair protein XRCC4 [Vitis vinifera]
Length = 259
Score = 129 bits (324), Expect = 5e-28
Identities = 60/86 (69%), Positives = 72/86 (83%), Gaps = 3/86 (3%)
Frame = +1
Query: 1 SEEEVEERASQ---PVSEYIDLGDK*LGFQQPGSIYGFDDADTGHKRLAWTFEKEGTKLE 171
SE+EV ERA+Q PVS+YI L ++ LGFQQPGS+YGF DA GH+RL+WTFEKEGTKLE
Sbjct: 48 SEDEVRERAAQWDQPVSDYIALAERFLGFQQPGSVYGFSDAGDGHRRLSWTFEKEGTKLE 107
Query: 172 WRWKCQPSPNSKKTTASILDFLMDAN 249
WRWKC SP+S+ TTA +LDFLM+AN
Sbjct: 108 WRWKCGLSPDSRSTTAGVLDFLMNAN 133
>ref|XP_002315726.1| predicted protein [Populus trichocarpa]
Length = 233
Score = 129 bits (324), Expect = 5e-28
Identities = 62/86 (72%), Positives = 71/86 (82%), Gaps = 3/86 (3%)
Frame = +1
Query: 1 SEEEVEERASQ---PVSEYIDLGDK*LGFQQPGSIYGFDDADTGHKRLAWTFEKEGTKLE 171
+EEEV +RA+Q PVS YI L +K LGFQ PGS+Y F DA G+KRL+WTFEKEGTKLE
Sbjct: 46 TEEEVRDRAAQWDQPVSTYIQLAEKHLGFQIPGSVYKFTDAGEGNKRLSWTFEKEGTKLE 105
Query: 172 WRWKCQPSPNSKKTTASILDFLMDAN 249
WRWKCQPSP++KKTT ILDFLMDAN
Sbjct: 106 WRWKCQPSPDTKKTTTLILDFLMDAN 131
>emb|CBI26376.3| unnamed protein product [Vitis vinifera]
Length = 258
Score = 129 bits (324), Expect = 5e-28
Identities = 60/86 (69%), Positives = 72/86 (83%), Gaps = 3/86 (3%)
Frame = +1
Query: 1 SEEEVEERASQ---PVSEYIDLGDK*LGFQQPGSIYGFDDADTGHKRLAWTFEKEGTKLE 171
SE+EV ERA+Q PVS+YI L ++ LGFQQPGS+YGF DA GH+RL+WTFEKEGTKLE
Sbjct: 48 SEDEVRERAAQWDQPVSDYIALAERFLGFQQPGSVYGFSDAGDGHRRLSWTFEKEGTKLE 107
Query: 172 WRWKCQPSPNSKKTTASILDFLMDAN 249
WRWKC SP+S+ TTA +LDFLM+AN
Sbjct: 108 WRWKCGLSPDSRSTTAGVLDFLMNAN 133
>ref|XP_006420167.1| hypothetical protein CICLE_v10005689mg [Citrus clementina]
gi|557522040|gb|ESR33407.1| hypothetical protein
CICLE_v10005689mg [Citrus clementina]
Length = 256
Score = 129 bits (323), Expect = 6e-28
Identities = 62/86 (72%), Positives = 72/86 (83%), Gaps = 3/86 (3%)
Frame = +1
Query: 1 SEEEVEERASQ---PVSEYIDLGDK*LGFQQPGSIYGFDDADTGHKRLAWTFEKEGTKLE 171
SEE+V++RA+Q PV+EYI L ++ LGFQQPGS+YGF DA G KRL+WTFEKEGTKLE
Sbjct: 46 SEEQVKDRAAQWDQPVTEYIKLAERYLGFQQPGSVYGFTDAADGCKRLSWTFEKEGTKLE 105
Query: 172 WRWKCQPSPNSKKTTASILDFLMDAN 249
WRWK P+PNSKK TA ILDFLMDAN
Sbjct: 106 WRWKFGPAPNSKKVTAGILDFLMDAN 131
>dbj|BAF03494.1| XRCC4 homolog [Populus nigra]
Length = 255
Score = 127 bits (320), Expect = 1e-27
Identities = 62/86 (72%), Positives = 70/86 (81%), Gaps = 3/86 (3%)
Frame = +1
Query: 1 SEEEVEERASQ---PVSEYIDLGDK*LGFQQPGSIYGFDDADTGHKRLAWTFEKEGTKLE 171
+EEEV RA+Q PVS YI L +K LGFQ PGS+Y F DA G+KRL+WTFEKEGTKLE
Sbjct: 46 TEEEVRGRAAQWDQPVSTYIQLAEKHLGFQIPGSVYKFTDAGEGNKRLSWTFEKEGTKLE 105
Query: 172 WRWKCQPSPNSKKTTASILDFLMDAN 249
WRWKCQPSP++KKTT ILDFLMDAN
Sbjct: 106 WRWKCQPSPDTKKTTTLILDFLMDAN 131
>ref|XP_006420172.1| hypothetical protein CICLE_v10007171mg, partial [Citrus clementina]
gi|557522045|gb|ESR33412.1| hypothetical protein
CICLE_v10007171mg, partial [Citrus clementina]
Length = 243
Score = 127 bits (319), Expect = 2e-27
Identities = 60/86 (69%), Positives = 71/86 (82%), Gaps = 3/86 (3%)
Frame = +1
Query: 1 SEEEVEERASQ---PVSEYIDLGDK*LGFQQPGSIYGFDDADTGHKRLAWTFEKEGTKLE 171
SEE+V++RA+Q PV+EY+ L ++ LGFQQPGS+Y F DA G KRL+WTFEKEGTKLE
Sbjct: 33 SEEQVKDRAAQWDQPVTEYVKLAERYLGFQQPGSVYAFTDAADGCKRLSWTFEKEGTKLE 92
Query: 172 WRWKCQPSPNSKKTTASILDFLMDAN 249
WRWKC +PNSKK TA ILDFLMDAN
Sbjct: 93 WRWKCGSAPNSKKVTAGILDFLMDAN 118
>ref|XP_004290387.1| PREDICTED: DNA repair protein XRCC4-like isoform 2 [Fragaria vesca
subsp. vesca]
Length = 218
Score = 127 bits (319), Expect = 2e-27
Identities = 57/86 (66%), Positives = 71/86 (82%), Gaps = 3/86 (3%)
Frame = +1
Query: 1 SEEEVEERASQ---PVSEYIDLGDK*LGFQQPGSIYGFDDADTGHKRLAWTFEKEGTKLE 171
SE+ V +RA+Q PV +Y+ L ++ LGFQ P S+Y F DA GHKRL+WTF+KEGTKLE
Sbjct: 51 SEDAVRDRAAQWDQPVPDYVSLAERYLGFQHPDSVYKFTDAGDGHKRLSWTFDKEGTKLE 110
Query: 172 WRWKCQPSPNSKKTTASILDFLMDAN 249
WRWKC+PSPNSK+TTA++LDFLMDAN
Sbjct: 111 WRWKCEPSPNSKETTAAVLDFLMDAN 136
>ref|XP_004290386.1| PREDICTED: DNA repair protein XRCC4-like isoform 1 [Fragaria vesca
subsp. vesca]
Length = 259
Score = 127 bits (319), Expect = 2e-27
Identities = 57/86 (66%), Positives = 71/86 (82%), Gaps = 3/86 (3%)
Frame = +1
Query: 1 SEEEVEERASQ---PVSEYIDLGDK*LGFQQPGSIYGFDDADTGHKRLAWTFEKEGTKLE 171
SE+ V +RA+Q PV +Y+ L ++ LGFQ P S+Y F DA GHKRL+WTF+KEGTKLE
Sbjct: 51 SEDAVRDRAAQWDQPVPDYVSLAERYLGFQHPDSVYKFTDAGDGHKRLSWTFDKEGTKLE 110
Query: 172 WRWKCQPSPNSKKTTASILDFLMDAN 249
WRWKC+PSPNSK+TTA++LDFLMDAN
Sbjct: 111 WRWKCEPSPNSKETTAAVLDFLMDAN 136
>ref|XP_002883399.1| hypothetical protein ARALYDRAFT_479818 [Arabidopsis lyrata subsp.
lyrata] gi|297329239|gb|EFH59658.1| hypothetical protein
ARALYDRAFT_479818 [Arabidopsis lyrata subsp. lyrata]
Length = 248
Score = 125 bits (314), Expect = 7e-27
Identities = 59/86 (68%), Positives = 71/86 (82%), Gaps = 3/86 (3%)
Frame = +1
Query: 1 SEEEVEERASQ---PVSEYIDLGDK*LGFQQPGSIYGFDDADTGHKRLAWTFEKEGTKLE 171
+EEEV ERA+Q PVSEY++L ++ LGFQQP S+YGF DA G KRL+WTFEKEGTKLE
Sbjct: 49 TEEEVAERAAQWDQPVSEYLELAERYLGFQQPNSVYGFSDALEGSKRLSWTFEKEGTKLE 108
Query: 172 WRWKCQPSPNSKKTTASILDFLMDAN 249
WRWKC+PS +SKK T ILDFL++AN
Sbjct: 109 WRWKCKPSHDSKKITVGILDFLLEAN 134
>ref|XP_006298402.1| hypothetical protein CARUB_v10014474mg [Capsella rubella]
gi|482567111|gb|EOA31300.1| hypothetical protein
CARUB_v10014474mg [Capsella rubella]
Length = 249
Score = 124 bits (310), Expect = 2e-26
Identities = 59/86 (68%), Positives = 71/86 (82%), Gaps = 3/86 (3%)
Frame = +1
Query: 1 SEEEVEERASQ---PVSEYIDLGDK*LGFQQPGSIYGFDDADTGHKRLAWTFEKEGTKLE 171
+EEEV ERA+Q PVSEY++L ++ LGFQQP SIYGF DA G KRL+WTFEKEGTKLE
Sbjct: 49 TEEEVAERAAQWDQPVSEYLELAEQYLGFQQPDSIYGFSDALEGCKRLSWTFEKEGTKLE 108
Query: 172 WRWKCQPSPNSKKTTASILDFLMDAN 249
WRWKC+PS +SKK T +LDFLM++N
Sbjct: 109 WRWKCKPSHDSKKITVGVLDFLMESN 134
>ref|NP_188951.2| DNA repair protein XRCC4-like protein [Arabidopsis thaliana]
gi|238479872|ref|NP_001154639.1| DNA repair protein
XRCC4-like protein [Arabidopsis thaliana]
gi|85701292|sp|Q682V0.2|XRCC4_ARATH RecName: Full=DNA
repair protein XRCC4 gi|9800643|gb|AAF91285.2|AF233528_1
putative double strand break repair protein [Arabidopsis
thaliana] gi|9294200|dbj|BAB02102.1| unnamed protein
product [Arabidopsis thaliana]
gi|332643196|gb|AEE76717.1| DNA repair protein
XRCC4-like protein [Arabidopsis thaliana]
gi|332643197|gb|AEE76718.1| DNA repair protein
XRCC4-like protein [Arabidopsis thaliana]
Length = 264
Score = 123 bits (308), Expect = 3e-26
Identities = 59/86 (68%), Positives = 69/86 (80%), Gaps = 3/86 (3%)
Frame = +1
Query: 1 SEEEVEERASQ---PVSEYIDLGDK*LGFQQPGSIYGFDDADTGHKRLAWTFEKEGTKLE 171
+EEEV ERA+Q PVSEY+ L ++ LGFQQP S+Y F DA G KRL+WTFEKEGTKLE
Sbjct: 65 TEEEVAERAAQWDQPVSEYLKLAEQYLGFQQPNSVYSFSDALEGSKRLSWTFEKEGTKLE 124
Query: 172 WRWKCQPSPNSKKTTASILDFLMDAN 249
WRWKC+PS +SKK T ILDFLM+AN
Sbjct: 125 WRWKCKPSDDSKKITVGILDFLMEAN 150
>dbj|BAD43030.1| putative double strand break repair protein (XRCC4) [Arabidopsis
thaliana] gi|56461768|gb|AAV91340.1| At1g61410
[Arabidopsis thaliana] gi|61656135|gb|AAX49370.1|
At1g61410 [Arabidopsis thaliana]
Length = 248
Score = 123 bits (308), Expect = 3e-26
Identities = 59/86 (68%), Positives = 69/86 (80%), Gaps = 3/86 (3%)
Frame = +1
Query: 1 SEEEVEERASQ---PVSEYIDLGDK*LGFQQPGSIYGFDDADTGHKRLAWTFEKEGTKLE 171
+EEEV ERA+Q PVSEY+ L ++ LGFQQP S+Y F DA G KRL+WTFEKEGTKLE
Sbjct: 49 TEEEVAERAAQWDQPVSEYLKLAEQYLGFQQPNSVYSFSDALEGSKRLSWTFEKEGTKLE 108
Query: 172 WRWKCQPSPNSKKTTASILDFLMDAN 249
WRWKC+PS +SKK T ILDFLM+AN
Sbjct: 109 WRWKCKPSDDSKKITVGILDFLMEAN 134