BLASTX nr result
ID: Atropa21_contig00035720
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00035720
(695 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006343397.1| PREDICTED: putative ribonuclease H protein A... 86 1e-32
gb|ABI34321.1| RNase H family protein [Solanum demissum] 76 1e-27
ref|XP_004253338.1| PREDICTED: putative ribonuclease H protein A... 65 2e-17
ref|XP_004253275.1| PREDICTED: uncharacterized protein LOC101268... 63 3e-17
ref|XP_004248595.1| PREDICTED: uncharacterized protein LOC101261... 63 3e-16
ref|XP_004243166.1| PREDICTED: putative ribonuclease H protein A... 57 4e-16
ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258... 60 8e-16
ref|XP_004253259.1| PREDICTED: putative ribonuclease H protein A... 55 8e-16
ref|XP_004247278.1| PREDICTED: putative ribonuclease H protein A... 58 9e-16
ref|XP_004253520.1| PREDICTED: putative ribonuclease H protein A... 58 1e-15
ref|XP_004234854.1| PREDICTED: putative ribonuclease H protein A... 61 2e-15
ref|XP_004228797.1| PREDICTED: putative ribonuclease H protein A... 59 3e-15
ref|XP_004244918.1| PREDICTED: putative ribonuclease H protein A... 56 5e-15
ref|XP_004253498.1| PREDICTED: putative ribonuclease H protein A... 50 2e-14
ref|XP_004243111.1| PREDICTED: putative ribonuclease H protein A... 59 3e-14
ref|XP_004253405.1| PREDICTED: putative ribonuclease H protein A... 54 4e-14
ref|XP_004253442.1| PREDICTED: putative ribonuclease H protein A... 55 5e-14
ref|XP_006367184.1| PREDICTED: uncharacterized protein LOC102601... 51 2e-13
ref|XP_004233578.1| PREDICTED: putative ribonuclease H protein A... 54 6e-13
ref|XP_006357898.1| PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase... 56 7e-13
>ref|XP_006343397.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 207
Score = 85.9 bits (211), Expect(3) = 1e-32
Identities = 39/73 (53%), Positives = 52/73 (71%)
Frame = +3
Query: 171 VLRNAQGYMLMSFSIHMDCNSNNHAEALAVLYGIKWCAQNGYNNLDLELDSEVVMNMIKQ 350
+ RN+ G M+M+FSI + C SNN AEALA +G KWC+Q G N LELDS +++NM+
Sbjct: 59 IARNSNGEMVMAFSIPVACTSNNMAEALAAEFGGKWCSQQGLTNFTLELDSMIIVNMVNN 118
Query: 351 KHTNNLKLKHIIE 389
K NNLKL+ II+
Sbjct: 119 KSNNNLKLRQIID 131
Score = 53.1 bits (126), Expect(3) = 1e-32
Identities = 23/56 (41%), Positives = 37/56 (66%)
Frame = +2
Query: 416 TNATISHCFKEANYVADFLAKQASLGGNHNLFLNYQYLPRQVKGIMTVDKMRMPIL 583
+NA ++HCF+E+N VADFLAK+A+ + +++ LP KG +DK +MP +
Sbjct: 140 SNAQVTHCFRESNQVADFLAKRAARLNQMMILTSFRQLPEMAKGSSFLDKCQMPCI 195
Score = 48.1 bits (113), Expect(3) = 1e-32
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Frame = +2
Query: 35 CDK-IERLRPMVKCIAVSWKKPEVGRVKLNTDGSYMRDINRVGIG 166
C K ER++P+ K V W P++G +K+NTDGS++ +I GIG
Sbjct: 13 CSKGYERIKPIQKLTQVKWSTPQIGTIKVNTDGSFLWEIGSAGIG 57
>gb|ABI34321.1| RNase H family protein [Solanum demissum]
Length = 945
Score = 76.3 bits (186), Expect(3) = 1e-27
Identities = 34/73 (46%), Positives = 52/73 (71%)
Frame = +3
Query: 171 VLRNAQGYMLMSFSIHMDCNSNNHAEALAVLYGIKWCAQNGYNNLDLELDSEVVMNMIKQ 350
++R+ M+M+FSI C+SNN AEALA +GI WC Q G++N LELDS++V++M++
Sbjct: 773 IVRDHTRRMIMAFSIPSSCSSNNLAEALAARFGILWCLQQGFHNCYLELDSKLVVDMVRN 832
Query: 351 KHTNNLKLKHIIE 389
NLK+K ++E
Sbjct: 833 GQATNLKIKGVVE 845
Score = 50.1 bits (118), Expect(3) = 1e-27
Identities = 22/63 (34%), Positives = 38/63 (60%)
Frame = +2
Query: 389 EDTTNWLRGTNATISHCFKEANYVADFLAKQASLGGNHNLFLNYQYLPRQVKGIMTVDKM 568
ED + N ++HC++EAN VAD LAK A + +++ +++ +P+ G +DKM
Sbjct: 845 EDIIQVVAKMNCEVNHCYREANQVADALAKHAVISNEAHMYHDWRDIPKLAVGSYQLDKM 904
Query: 569 RMP 577
+MP
Sbjct: 905 QMP 907
Score = 43.5 bits (101), Expect(3) = 1e-27
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = +2
Query: 11 IEGNWNNVCDKIERLRPMVKCIAVSWKKPEVGRVKLNTDGSY 136
I +W ++ +K+E LRP K V W P + VK+NTDGS+
Sbjct: 722 IGNSWRDLLNKVESLRPYPKWKIVHWNTPNINCVKINTDGSF 763
>ref|XP_004253338.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 655
Score = 65.5 bits (158), Expect(2) = 2e-17
Identities = 30/88 (34%), Positives = 51/88 (57%)
Frame = +3
Query: 171 VLRNAQGYMLMSFSIHMDCNSNNHAEALAVLYGIKWCAQNGYNNLDLELDSEVVMNMIKQ 350
+LR+ QG ++ +FSI +NN AE A LYG++WC Q+GY ++LE+DSE++ N IK
Sbjct: 566 ILRDFQGKIVYAFSIPFGVGTNNFAEIKAALYGMQWCEQHGYKKVELEVDSELLFNWIKN 625
Query: 351 KHTNNLKLKHIIEKTQPTGSGEQMLPSH 434
+ + ++++ Q + H
Sbjct: 626 TTKIPWRYEDLVQQIQQISMKMEQFQCH 653
Score = 50.1 bits (118), Expect(2) = 2e-17
Identities = 22/51 (43%), Positives = 30/51 (58%)
Frame = +2
Query: 14 EGNWNNVCDKIERLRPMVKCIAVSWKKPEVGRVKLNTDGSYMRDINRVGIG 166
+ NWNN+ + IE K + VSW KP G KLNTDGS +++ + G G
Sbjct: 514 QANWNNLVNIIENCSQQYKIVLVSWNKPAFGTYKLNTDGSAIQNSGKTGGG 564
>ref|XP_004253275.1| PREDICTED: uncharacterized protein LOC101268853 [Solanum
lycopersicum]
Length = 1333
Score = 63.2 bits (152), Expect(2) = 3e-17
Identities = 30/92 (32%), Positives = 53/92 (57%)
Frame = +3
Query: 174 LRNAQGYMLMSFSIHMDCNSNNHAEALAVLYGIKWCAQNGYNNLDLELDSEVVMNMIKQK 353
LR+ QG ++ +FSI +NN AE A LYG++WC Q+GY ++LE++SE++ N IK
Sbjct: 1185 LRDFQGKIVYAFSIPFGVGTNNFAEIKAALYGMEWCEQHGYKKVELEVNSELLYNWIKNT 1244
Query: 354 HTNNLKLKHIIEKTQPTGSGEQMLPSHIVSRK 449
+ + ++++ Q + H + R+
Sbjct: 1245 TKIPWRYEDLVQQIQQISMKMEQFHCHHIYRE 1276
Score = 52.0 bits (123), Expect(2) = 3e-17
Identities = 22/51 (43%), Positives = 32/51 (62%)
Frame = +2
Query: 14 EGNWNNVCDKIERLRPMVKCIAVSWKKPEVGRVKLNTDGSYMRDINRVGIG 166
+ NWNN+ + IE K + VSW KP +G KLNTDGS +++ ++G G
Sbjct: 1132 QSNWNNLVNIIEHCSQQYKIVLVSWNKPALGTYKLNTDGSAIQNSGKIGGG 1182
>ref|XP_004248595.1| PREDICTED: uncharacterized protein LOC101261371 [Solanum
lycopersicum]
Length = 1246
Score = 63.2 bits (152), Expect(2) = 3e-16
Identities = 33/104 (31%), Positives = 58/104 (55%), Gaps = 3/104 (2%)
Frame = +3
Query: 171 VLRNAQGYMLMSFSIHMDCNSNNHAEALAVLYGIKWCAQNGYNNLDLELDSEVVMNMIKQ 350
+LR+ QG ++ +FS+ +NN AE A LYG++WC Q+GY ++LE+DS+++ N IK
Sbjct: 1112 ILRDHQGKIVYAFSLPFGFGTNNIAEIKAALYGLEWCDQHGYKRVELEVDSQLLCNWIKN 1171
Query: 351 KHTNNLKLKHIIEKTQPTGSGEQMLPSHIVSRKPTM---LLISW 473
K + +I++ + + H + R+ + LL W
Sbjct: 1172 KTNIPWIYEDLIQQIKQITRKIEQFQCHHIYREANITADLLSKW 1215
Score = 48.5 bits (114), Expect(2) = 3e-16
Identities = 19/51 (37%), Positives = 32/51 (62%)
Frame = +2
Query: 14 EGNWNNVCDKIERLRPMVKCIAVSWKKPEVGRVKLNTDGSYMRDINRVGIG 166
+ +WN + + +E + K + VSW KP +G KLNTDGS +++ ++G G
Sbjct: 1060 QSSWNKLINIVEHCKQQYKIVLVSWNKPGLGTYKLNTDGSALQNSGKIGGG 1110
>ref|XP_004243166.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 316
Score = 56.6 bits (135), Expect(3) = 4e-16
Identities = 25/76 (32%), Positives = 47/76 (61%)
Frame = +3
Query: 171 VLRNAQGYMLMSFSIHMDCNSNNHAEALAVLYGIKWCAQNGYNNLDLELDSEVVMNMIKQ 350
+LR+ +G ++++F+ + SNN AE A +G+ W Y N+ LE+DS++V+ I +
Sbjct: 167 ILRDTEGRLVLAFATSLGEGSNNQAEMEAAQFGLSWAIDLDYRNIILEVDSQIVVQWITK 226
Query: 351 KHTNNLKLKHIIEKTQ 398
K T++ + + +EK Q
Sbjct: 227 KTTHHWSVSNQLEKIQ 242
Score = 37.7 bits (86), Expect(3) = 4e-16
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +2
Query: 20 NWNNVCDKIERLRPMVKCIAVSWKKPEVGRVKLNTDGSYMRDINRVGIG 166
NW + E+ + +K V+W +P +K+NTDGS + + ++G G
Sbjct: 117 NWTALYQTSEKCKHDIKVCKVAWNRPPEEWIKINTDGSAINNPGKIGAG 165
Score = 36.6 bits (83), Expect(3) = 4e-16
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +2
Query: 434 HCFKEANYVADFLAKQASLGGNHNLFLNYQYLPRQVKGIMTVDKMRMP 577
H F+EAN+ AD L+K + L+ N +P++ + +D M MP
Sbjct: 255 HIFREANWTADSLSKHSHGTTGPQLYFNNNQMPKEAQAYYRMDLMNMP 302
>ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258077 [Solanum
lycopersicum]
Length = 1454
Score = 59.7 bits (143), Expect(2) = 8e-16
Identities = 37/130 (28%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Frame = +3
Query: 171 VLRNAQGYMLMSFSIHMDCNSNNHAEALAVLYGIKWCAQNGYNNLDLELDSEVVMNMIKQ 350
+LR+ QG ++ +FS+ +NN AE A L+G+ WC Q+GY ++LE+DS+++ N I
Sbjct: 1305 ILRDNQGKIIYAFSLPFGFGTNNFAEIKAALHGLDWCEQHGYKKIELEVDSKLLCNWINS 1364
Query: 351 KHTNNLKLKHIIEKTQPTGSGEQMLPSHIVSRKPTM---LLISWRSRHHWEATITSFSTT 521
+ + +I++ H + R+ LL W H+ E + F TT
Sbjct: 1365 NINIPWRYEELIQQIHQIIRKMDQFQCHHIYREANCTADLLSKW--SHNLE-ILQKFYTT 1421
Query: 522 STYLDKLRES 551
+ +R S
Sbjct: 1422 RQLKEPIRGS 1431
Score = 50.4 bits (119), Expect(2) = 8e-16
Identities = 19/49 (38%), Positives = 34/49 (69%)
Frame = +2
Query: 20 NWNNVCDKIERLRPMVKCIAVSWKKPEVGRVKLNTDGSYMRDINRVGIG 166
+WNN+ + +E+ + K + V W KP++G+ KLNTDGS +++ ++G G
Sbjct: 1255 SWNNLINIVEQCKQHYKILIVKWNKPDLGKYKLNTDGSALQNSGKIGGG 1303
>ref|XP_004253259.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 668
Score = 54.7 bits (130), Expect(3) = 8e-16
Identities = 24/76 (31%), Positives = 49/76 (64%)
Frame = +3
Query: 171 VLRNAQGYMLMSFSIHMDCNSNNHAEALAVLYGIKWCAQNGYNNLDLELDSEVVMNMIKQ 350
++R+ +G ++++F+ + +NN AEA A L+G+ W + G+ N+ +ELDS++V+ I +
Sbjct: 522 IIRDKEGKIVLAFATPLGDGTNNKAEAEAALFGLSWALELGHRNILIELDSQLVVQWISK 581
Query: 351 KHTNNLKLKHIIEKTQ 398
K + + + IE+ Q
Sbjct: 582 KEPPHWNVINQIERIQ 597
Score = 37.7 bits (86), Expect(3) = 8e-16
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +2
Query: 17 GNWNNVCDKIERLRPMVKCIAVSWKKPEVGRVKLNTDGSYMRDINRVGIG 166
GNW + ER + +K +W +P +K+NTDGS + + G G
Sbjct: 471 GNWAALIQTAERCKHEIKVCMTTWNRPPEQWIKINTDGSALINTGHCGAG 520
Score = 37.4 bits (85), Expect(3) = 8e-16
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +2
Query: 419 NATISHCFKEANYVADFLAKQASLGGNHNLFLNYQYLPRQVKGIMTVDKMRMP 577
N +H F+EAN+VAD L+K + ++ + LPR+ + +D MP
Sbjct: 605 NFKCNHIFREANWVADALSKHSHTIATPQVYFSNSQLPREAQAYYQMDLQNMP 657
>ref|XP_004247278.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 213
Score = 57.8 bits (138), Expect(3) = 9e-16
Identities = 33/83 (39%), Positives = 51/83 (61%), Gaps = 7/83 (8%)
Frame = +3
Query: 171 VLRNAQGYMLMSFSIHMDCNSNNHAEALAVLYGIKWCAQNGYNNLDLELDSEVVMNMIKQ 350
++R+ +G M+M+FS + SNN AE A L+G+ W + G+ N+ LELDS++V+ I
Sbjct: 64 IIRDKEGKMIMAFSTPLGEGSNNQAEIEAALFGLTWAFELGFKNILLELDSQLVVQWISN 123
Query: 351 K------HTNNL-KLKHIIEKTQ 398
K TN L +L+ II +TQ
Sbjct: 124 KIAPPWNLTNQLERLQQIIIQTQ 146
Score = 37.4 bits (85), Expect(3) = 9e-16
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +2
Query: 419 NATISHCFKEANYVADFLAKQASLGGNHNLFLNYQYLPRQVKGIMTVDKMRMP 577
N SH F+EAN+VAD L+K + ++++ LP++ +D M MP
Sbjct: 147 NFRCSHIFREANWVADALSKHSHNNTAPQVYVHSNQLPKEAHAYYQMDLMDMP 199
Score = 34.7 bits (78), Expect(3) = 9e-16
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +2
Query: 20 NWNNVCDKIERLRPMVKCIAVSWKKPEVGRVKLNTDGSYMRDINRVGIG 166
NW + E+ ++ V+W KP +K+NTDGS + + ++G G
Sbjct: 14 NWTALIQTSEKCVHNIEVYKVAWFKPPDQWIKINTDGSALTNEGKIGAG 62
>ref|XP_004253520.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 468
Score = 57.8 bits (138), Expect(3) = 1e-15
Identities = 33/83 (39%), Positives = 51/83 (61%), Gaps = 7/83 (8%)
Frame = +3
Query: 171 VLRNAQGYMLMSFSIHMDCNSNNHAEALAVLYGIKWCAQNGYNNLDLELDSEVVMNMIKQ 350
++R+ +G M+M+FS + SNN AE A L+G+ W + G+ N+ LELDS++V+ I
Sbjct: 319 IIRDKEGKMIMAFSTPLGEGSNNQAEIEAALFGLTWAFELGFKNILLELDSQLVVQWISN 378
Query: 351 K------HTNNL-KLKHIIEKTQ 398
K TN L +L+ II +TQ
Sbjct: 379 KIAPPWNLTNQLERLQQIIIQTQ 401
Score = 35.8 bits (81), Expect(3) = 1e-15
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +2
Query: 419 NATISHCFKEANYVADFLAKQASLGGNHNLFLNYQYLPRQVKGIMTVDKMRMP 577
N H F+EAN+VAD L+K + +++++ LP++ +D M MP
Sbjct: 402 NFRCCHIFREANWVADALSKHSHNNTAPHVYVHSNQLPKEAHAYYQMDLMDMP 454
Score = 35.4 bits (80), Expect(3) = 1e-15
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 20 NWNNVCDKIERLRPMVKCIAVSWKKPEVGRVKLNTDGSYMRDINRVGIG 166
NW + E+ +K V+W KP +K+NTDGS + + ++G G
Sbjct: 269 NWTTLILTSEKCVHNIKVYKVTWFKPPDQWIKINTDGSALTNEGKIGAG 317
>ref|XP_004234854.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 181
Score = 60.8 bits (146), Expect(3) = 2e-15
Identities = 34/83 (40%), Positives = 51/83 (61%), Gaps = 7/83 (8%)
Frame = +3
Query: 171 VLRNAQGYMLMSFSIHMDCNSNNHAEALAVLYGIKWCAQNGYNNLDLELDSEVVMNMIKQ 350
++R+ +G +LM+FS + SNN AE A L+G+ W + G+ N+ LELDS++V+ I
Sbjct: 32 IIRDKEGKLLMAFSTPLGEGSNNQAEIEATLFGMTWALELGFKNILLELDSQLVVQWISN 91
Query: 351 K------HTNNL-KLKHIIEKTQ 398
K TN L +L HII +TQ
Sbjct: 92 KIAPQWSFTNQLERLHHIIMQTQ 114
Score = 38.5 bits (88), Expect(3) = 2e-15
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +2
Query: 419 NATISHCFKEANYVADFLAKQASLGGNHNLFLNYQYLPRQVKGIMTVDKMRMP 577
N SH F+EAN+VAD L+K + ++ N LP++ + +D + MP
Sbjct: 115 NFKCSHIFREANWVADALSKHSHNTTAPQVYFNSNQLPKEAQAYYQMDLLNMP 167
Score = 28.9 bits (63), Expect(3) = 2e-15
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 80 VSWKKPEVGRVKLNTDGSYMRDINRVGIG 166
V+W KP +K+NTDGS + + ++G G
Sbjct: 2 VTWFKPPDQWIKINTDGSAIINEGKIGAG 30
>ref|XP_004228797.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 389
Score = 59.3 bits (142), Expect(3) = 3e-15
Identities = 27/76 (35%), Positives = 48/76 (63%)
Frame = +3
Query: 171 VLRNAQGYMLMSFSIHMDCNSNNHAEALAVLYGIKWCAQNGYNNLDLELDSEVVMNMIKQ 350
+LR+ QG ++ +F+I + +NN AE A L+G++WC Q+G+ + LE+DSE++ I
Sbjct: 240 ILRDHQGKLIYAFAIPLGFGTNNFAEIQAALHGLQWCQQHGFEKIILEVDSELLHKWIIN 299
Query: 351 KHTNNLKLKHIIEKTQ 398
K + + H I++ Q
Sbjct: 300 KSSVPWRCLHYIQQIQ 315
Score = 39.3 bits (90), Expect(3) = 3e-15
Identities = 16/51 (31%), Positives = 30/51 (58%)
Frame = +2
Query: 14 EGNWNNVCDKIERLRPMVKCIAVSWKKPEVGRVKLNTDGSYMRDINRVGIG 166
+ +W + + +E+ + +K V+W++P G KLNTDGS + ++G G
Sbjct: 188 QSSWERLFNLVEQCQQHLKVTMVNWERPPEGIHKLNTDGSAKHNTGKIGGG 238
Score = 29.3 bits (64), Expect(3) = 3e-15
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +2
Query: 434 HCFKEANYVADFLAKQASLGGNHNLFLNYQYLPRQVKGIMTVDKMRMPI 580
H ++EAN AD LAK + F Q L +KG ++KM M +
Sbjct: 328 HIYREANGTADLLAKWSHSMDIIQQFYTSQQLEGVIKGSYILEKMGMQL 376
>ref|XP_004244918.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 1010
Score = 55.8 bits (133), Expect(3) = 5e-15
Identities = 24/58 (41%), Positives = 37/58 (63%)
Frame = +3
Query: 171 VLRNAQGYMLMSFSIHMDCNSNNHAEALAVLYGIKWCAQNGYNNLDLELDSEVVMNMI 344
+LR+ G ++ +F+I +NN AE A LYG+ WC Q+GY + LE+DSE++ I
Sbjct: 861 ILRDHNGKLIYAFAIPFGIGTNNFAEMKAALYGLSWCEQHGYKRIILEVDSELLSKWI 918
Score = 43.9 bits (102), Expect(3) = 5e-15
Identities = 20/51 (39%), Positives = 31/51 (60%)
Frame = +2
Query: 14 EGNWNNVCDKIERLRPMVKCIAVSWKKPEVGRVKLNTDGSYMRDINRVGIG 166
+ N + + + E + VK V W+KP +G KLNTDGS + +IN++G G
Sbjct: 809 QNNLDMLINLAENCQQQVKVTKVMWEKPSLGIFKLNTDGSAIHNINKIGGG 859
Score = 27.3 bits (59), Expect(3) = 5e-15
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +2
Query: 434 HCFKEANYVADFLAKQASLGGNHNLFLNYQYLPRQVKGIMTVDKM 568
H F+EAN AD LAK + F Q L ++G ++KM
Sbjct: 949 HIFREANGTADLLAKWSHQQDIVQHFYTQQQLIGTIRGNYLLEKM 993
>ref|XP_004253498.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 308
Score = 50.1 bits (118), Expect(3) = 2e-14
Identities = 23/76 (30%), Positives = 47/76 (61%)
Frame = +3
Query: 171 VLRNAQGYMLMSFSIHMDCNSNNHAEALAVLYGIKWCAQNGYNNLDLELDSEVVMNMIKQ 350
++R+ G ++++F+ + SNN AE A L+G+ + G+ N+ +ELDS++V++ I +
Sbjct: 159 IIRDKDGKLILAFATSLGEGSNNKAETEAALFGLVKALELGFKNIIMELDSQLVVHWINK 218
Query: 351 KHTNNLKLKHIIEKTQ 398
K ++ + + I K Q
Sbjct: 219 KSAHHWSVANEIAKIQ 234
Score = 37.7 bits (86), Expect(3) = 2e-14
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +2
Query: 407 LRGTNATISHCFKEANYVADFLAKQASLGGNHNLFLNYQYLPRQVKGIMTVDKMRMP 577
L+ N H +EAN+VAD L+K + + +++N LP+ + VD + MP
Sbjct: 238 LQTQNFKCQHTLREANWVADSLSKHSHYTTSPQIYVNSTQLPKAAQAYYRVDLLNMP 294
Score = 37.4 bits (85), Expect(3) = 2e-14
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +2
Query: 20 NWNNVCDKIERLRPMVKCIAVSWKKPEVGRVKLNTDGSYMRDINRVGIG 166
+W + ER + +K V+W +P +K+NTDGS + + ++G G
Sbjct: 109 HWTALITTSERCKHEIKVCKVTWNRPPEEWIKINTDGSALTNPGKIGAG 157
>ref|XP_004243111.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 927
Score = 59.3 bits (142), Expect(3) = 3e-14
Identities = 27/80 (33%), Positives = 47/80 (58%)
Frame = +3
Query: 171 VLRNAQGYMLMSFSIHMDCNSNNHAEALAVLYGIKWCAQNGYNNLDLELDSEVVMNMIKQ 350
VLR+ QG ++ +FS+ + + N AE A +GI WC Q+GY +++LE+DSE++ I
Sbjct: 785 VLRHHQGKLICAFSVPLGVGTYNFAELKAATFGIDWCEQHGYKSIELEVDSEIICQWINN 844
Query: 351 KHTNNLKLKHIIEKTQPTGS 410
+ +H +++ T S
Sbjct: 845 TIKPPWRCQHNVQQLLQTTS 864
Score = 38.1 bits (87), Expect(3) = 3e-14
Identities = 16/51 (31%), Positives = 30/51 (58%)
Frame = +2
Query: 14 EGNWNNVCDKIERLRPMVKCIAVSWKKPEVGRVKLNTDGSYMRDINRVGIG 166
+ NW ++ + +E+ + + K V W KP+ KLNT+GS + + ++G G
Sbjct: 733 QSNWESLINIVEQCKQLYKVNMVRWIKPKQHVYKLNTNGSALAESGKIGGG 783
Score = 26.9 bits (58), Expect(3) = 3e-14
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 434 HCFKEANYVADFLAKQASLGGNHNLFL-NYQYLPRQVKG 547
H ++EAN AD LAK +H + + + Y P+Q+KG
Sbjct: 873 HIYREANNTADLLAK-----WSHTMDIPQHFYTPQQLKG 906
>ref|XP_004253405.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 375
Score = 53.9 bits (128), Expect(3) = 4e-14
Identities = 22/61 (36%), Positives = 43/61 (70%)
Frame = +3
Query: 171 VLRNAQGYMLMSFSIHMDCNSNNHAEALAVLYGIKWCAQNGYNNLDLELDSEVVMNMIKQ 350
++R+ +G M+++F+ + +NN AEA A L+G+ W + G+ N+ +ELDS++V++ I +
Sbjct: 251 IIRDKEGKMVLAFATPLGDGTNNKAEAEAALFGLSWALELGHRNILIELDSQLVVHWISK 310
Query: 351 K 353
K
Sbjct: 311 K 311
Score = 37.7 bits (86), Expect(3) = 4e-14
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +2
Query: 17 GNWNNVCDKIERLRPMVKCIAVSWKKPEVGRVKLNTDGSYMRDINRVGIG 166
GNW + ER + +K +W +P +K+NTDGS + + G G
Sbjct: 200 GNWAALIQTAERCKHEIKVCMTTWNRPPEQWIKINTDGSALINTGHCGAG 249
Score = 32.3 bits (72), Expect(3) = 4e-14
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 446 EANYVADFLAKQASLGGNHNLFLNYQYLPRQVKGIMTVDKMRMP 577
EAN+VAD L+K + ++ N LPR+ + +D MP
Sbjct: 318 EANWVADALSKHSHTIATPQVYFNNSQLPREAQAYYQMDLQNMP 361
>ref|XP_004253442.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 775
Score = 54.7 bits (130), Expect(3) = 5e-14
Identities = 25/76 (32%), Positives = 47/76 (61%)
Frame = +3
Query: 171 VLRNAQGYMLMSFSIHMDCNSNNHAEALAVLYGIKWCAQNGYNNLDLELDSEVVMNMIKQ 350
++RN +G ++M+F+ + SNN AE A L G+ + GY N+ +ELDS++++ I +
Sbjct: 626 IIRNKEGKLVMAFATSLGEGSNNKAETEAALIGLVHALELGYRNIIMELDSQLIVQWISK 685
Query: 351 KHTNNLKLKHIIEKTQ 398
K ++ + + IE+ Q
Sbjct: 686 KSVHHWSVSNQIERLQ 701
Score = 36.2 bits (82), Expect(3) = 5e-14
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +2
Query: 419 NATISHCFKEANYVADFLAKQASLGGNHNLFLNYQYLPRQVKGIMTVDKMRMP 577
N H F+EAN+VAD L+K + + L+ + LP++ +D + MP
Sbjct: 709 NFKCQHIFREANWVADALSKHSHHITSPQLYFDSNQLPKEANAYYRMDLLNMP 761
Score = 32.7 bits (73), Expect(3) = 5e-14
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +2
Query: 20 NWNNVCDKIERLRPMVKCIAVSWKKPEVGRVKLNTDGSYMRDINRVGIG 166
+W + E+ + K V W +P +K+NTDGS + + +G G
Sbjct: 576 HWTALIHTSEKCKHDTKVCQVVWNRPPEEWIKINTDGSALTNPGNIGAG 624
>ref|XP_006367184.1| PREDICTED: uncharacterized protein LOC102601483 [Solanum tuberosum]
Length = 2019
Score = 50.8 bits (120), Expect(3) = 2e-13
Identities = 21/59 (35%), Positives = 38/59 (64%)
Frame = +3
Query: 171 VLRNAQGYMLMSFSIHMDCNSNNHAEALAVLYGIKWCAQNGYNNLDLELDSEVVMNMIK 347
V+RN G +++++S + +NN AE A ++GI WC YN + LE+DS+++++ K
Sbjct: 1098 VIRNHLGEIILAYSTPLGTGTNNQAEVEAAIFGIAWCIHMKYNQVILEVDSQLLVDWFK 1156
Score = 44.3 bits (103), Expect(3) = 2e-13
Identities = 21/48 (43%), Positives = 25/48 (52%)
Frame = +2
Query: 23 WNNVCDKIERLRPMVKCIAVSWKKPEVGRVKLNTDGSYMRDINRVGIG 166
WN C+ IE K AV W KP VKLNTDGS + + +G G
Sbjct: 1049 WNKFCNVIENCSQDTKVTAVQWTKPPYRWVKLNTDGSALSNPGSIGAG 1096
Score = 26.6 bits (57), Expect(3) = 2e-13
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +2
Query: 434 HCFKEANYVADFLAKQA 484
H F+EAN+VAD L+K +
Sbjct: 1186 HTFREANFVADVLSKHS 1202
>ref|XP_004233578.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 955
Score = 54.3 bits (129), Expect(2) = 6e-13
Identities = 28/79 (35%), Positives = 42/79 (53%)
Frame = +3
Query: 171 VLRNAQGYMLMSFSIHMDCNSNNHAEALAVLYGIKWCAQNGYNNLDLELDSEVVMNMIKQ 350
+LR+ G + +FSI +NN AE A YG+ WC Q+GY ++ LE+DSE++ I
Sbjct: 806 ILRDYTGKLHYAFSIPFGLGTNNIAEMEAARYGLDWCEQHGYKSILLEVDSEILQKWISN 865
Query: 351 KHTNNLKLKHIIEKTQPTG 407
+ + IE Q G
Sbjct: 866 TIAIPWRYQQTIEHIQDIG 884
Score = 46.2 bits (108), Expect(2) = 6e-13
Identities = 19/49 (38%), Positives = 32/49 (65%)
Frame = +2
Query: 20 NWNNVCDKIERLRPMVKCIAVSWKKPEVGRVKLNTDGSYMRDINRVGIG 166
+W + + +E+ + +K I VSW+KP+ G KLNTDGS + + ++G G
Sbjct: 756 SWYRLINLVEQCQQQLKVIMVSWRKPQFGIYKLNTDGSALPESGKIGGG 804
>ref|XP_006357898.1| PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 5-like
[Solanum tuberosum]
Length = 572
Score = 55.8 bits (133), Expect(2) = 7e-13
Identities = 29/76 (38%), Positives = 44/76 (57%)
Frame = +3
Query: 171 VLRNAQGYMLMSFSIHMDCNSNNHAEALAVLYGIKWCAQNGYNNLDLELDSEVVMNMIKQ 350
V+R G M+M+F+ + ++NN++EA L G WC +N LELDS +++NMI
Sbjct: 39 VVRTGNGQMVMAFASPIHLHTNNYSEAQTALQGTLWCCNQHCHNYTLELDSLLIVNMILG 98
Query: 351 KHTNNLKLKHIIEKTQ 398
KL+ II+K Q
Sbjct: 99 LDNILWKLQEIIKKIQ 114
Score = 44.3 bits (103), Expect(2) = 7e-13
Identities = 20/41 (48%), Positives = 28/41 (68%)
Frame = +2
Query: 425 TISHCFKEANYVADFLAKQASLGGNHNLFLNYQYLPRQVKG 547
T+ HC+KE N VAD LAK A+ N+ +FL LP+++KG
Sbjct: 123 TVQHCYKEGNTVADSLAKYATNITNNEVFLQEDDLPQEIKG 163