BLASTX nr result
ID: Atropa21_contig00035636
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00035636
(461 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga... 85 9e-15
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga... 84 1e-14
ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664... 70 3e-10
ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665... 65 1e-08
ref|XP_006579104.1| PREDICTED: uncharacterized protein LOC102661... 62 8e-08
ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663... 61 1e-07
ref|XP_004229147.1| PREDICTED: uncharacterized protein LOC101247... 60 4e-07
ref|NP_063979.1| orf315 gene product (mitochondrion) [Beta vulga... 59 5e-07
gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00... 59 9e-07
ref|XP_004253503.1| PREDICTED: uncharacterized protein LOC101243... 57 2e-06
gb|AAD26953.1| putative non-LTR retrolelement reverse transcript... 57 3e-06
gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CA... 56 4e-06
ref|NP_567266.1| RNA-directed DNA polymerase (reverse transcript... 56 4e-06
gb|ABK28243.1| unknown [Arabidopsis thaliana] 56 4e-06
gb|ABE65512.1| hypothetical protein At4g04650 [Arabidopsis thali... 56 4e-06
ref|XP_004253303.1| PREDICTED: uncharacterized protein LOC101255... 55 7e-06
>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1114
Score = 85.1 bits (209), Expect = 9e-15
Identities = 53/152 (34%), Positives = 77/152 (50%), Gaps = 1/152 (0%)
Frame = +1
Query: 4 TLQILWNGIRQQFLSFCGICHKDKL*VRWVHSYYIKSQSIWDV-LPKQTSWVXXXXXXXX 180
T +LWN L + +DKL VRWV++YYIK Q+I +V + TSW+
Sbjct: 865 TNMVLWNKAAILKLLWAITFKQDKLWVRWVNAYYIKRQNIENVTVSSNTSWILRKIFESR 924
Query: 181 XXXXXAGYSYTNYLNMPNFSIQKFYRQLQP*FPKVPWRKMIYNNYGLPKWIFTFRVAATG 360
G + N NFSI+K Y+ LQ + V W+++I NN PK F +A
Sbjct: 925 ELLTRTG-GWEAVSNHMNFSIKKTYKLLQEDYENVVWKRLICNNKATPKSQFILWLAMLN 983
Query: 361 RLYTRDRLAKWGITNTLDCPLCDNANESIGHL 456
RL T +R+++W + C +C N E+I HL
Sbjct: 984 RLATAERVSRWNRDVSPLCKMCGNEIETIQHL 1015
>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1110
Score = 84.3 bits (207), Expect = 1e-14
Identities = 51/147 (34%), Positives = 73/147 (49%), Gaps = 1/147 (0%)
Frame = +1
Query: 19 WNGIRQQFLSFCGICHKDKL*VRWVHSYYIKSQSIWDV-LPKQTSWVXXXXXXXXXXXXX 195
WN L + +DKL VRW+HSYYIK Q I V + QT+W+
Sbjct: 867 WNRAAMLKLLWAIEFKRDKLWVRWIHSYYIKRQDILTVNISNQTTWILRKIVKARDHLSN 926
Query: 196 AGYSYTNYLNMPNFSIQKFYRQLQP*FPKVPWRKMIYNNYGLPKWIFTFRVAATGRLYTR 375
G + FS++K Y+++ +V WR++I NNY PK F + RL T
Sbjct: 927 IG-DWDEICIGDKFSMKKAYKKISENGERVRWRRLICNNYATPKSKFILWMMLHERLPTV 985
Query: 376 DRLAKWGITNTLDCPLCDNANESIGHL 456
DR+++WG+ L+ LC N E+I HL
Sbjct: 986 DRISRWGVQCDLNYRLCRNDGETIQHL 1012
>ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664824 [Glycine max]
Length = 939
Score = 70.1 bits (170), Expect = 3e-10
Identities = 48/152 (31%), Positives = 74/152 (48%), Gaps = 2/152 (1%)
Frame = +1
Query: 7 LQILWNGIRQQFLSFCGICHK-DKL*VRWVHSYYIKSQSIWD-VLPKQTSWVXXXXXXXX 180
L++LWN +C+K D L ++W+H+YYI+ QSIW VL K SW+
Sbjct: 701 LKLLWN-----------VCNKSDNLWIKWLHTYYIRGQSIWSMVLKKSHSWIMSSMMKLR 749
Query: 181 XXXXXAGYSYTNYLNMPNFSIQKFYRQLQP*FPKVPWRKMIYNNYGLPKWIFTFRVAATG 360
Y + + F ++K Y L K+ WR ++ NN P+ +F A
Sbjct: 750 PLLL----QYQSRMQ-DVFKMKKIYLALFEESEKMSWRTLMCNNLARPRALFCLWQACHF 804
Query: 361 RLYTRDRLAKWGITNTLDCPLCDNANESIGHL 456
RL ++DRL K+G+ +C C ++ ES HL
Sbjct: 805 RLASKDRLIKFGLNVDANCAFC-SSMESHEHL 835
>ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665746 [Glycine max]
Length = 506
Score = 64.7 bits (156), Expect = 1e-08
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 1/148 (0%)
Frame = +1
Query: 16 LWNGIRQQFLSFCGICHKDKL*VRWVHSYYIKSQSIWDVLPKQT-SWVXXXXXXXXXXXX 192
+WN L + +D L V+W+ +YY+K + + K T SW+
Sbjct: 252 IWNKANLMKLLWNLSSKEDSLWVKWIQAYYVKRSELMHIEMKNTDSWIMKAILKQREDLE 311
Query: 193 XAGYSYTNYLNMPNFSIQKFYRQLQP*FPKVPWRKMIYNNYGLPKWIFTFRVAATGRLYT 372
+ + + ++ K YR+LQ + W+ ++Y N P+ F +A GRL T
Sbjct: 312 KID-NMEELMIRGSINMGKLYRKLQDCGQRKEWKNLLYGNTARPRANFILWLACHGRLST 370
Query: 373 RDRLAKWGITNTLDCPLCDNANESIGHL 456
+DRL K+G+ + C C + ES+ HL
Sbjct: 371 KDRLCKYGMIDDKSCCFC-SEEESMNHL 397
>ref|XP_006579104.1| PREDICTED: uncharacterized protein LOC102661523 [Glycine max]
Length = 947
Score = 62.0 bits (149), Expect = 8e-08
Identities = 42/153 (27%), Positives = 68/153 (44%), Gaps = 2/153 (1%)
Frame = +1
Query: 7 LQILWNGIRQQFLSFCGICHK-DKL*VRWVHSYYIKSQSIWDVLPKQT-SWVXXXXXXXX 180
L LWN +C K D L V+W+H++YIK+ S+ + + SWV
Sbjct: 701 LNCLWN-----------LCKKVDNLWVKWIHAHYIKNSSVMNTMVTNNFSWVLKNVLSQR 749
Query: 181 XXXXXAGYSYTNYLNMPNFSIQKFYRQLQP*FPKVPWRKMIYNNYGLPKWIFTFRVAATG 360
+ LN F ++K Y ++ +V W ++ N P+ I T +A G
Sbjct: 750 EYIHTLQPVWDELLNSERFKMKKAYDKMME-ADRVHWSGLMRKNCARPRAIHTTWLACHG 808
Query: 361 RLYTRDRLAKWGITNTLDCPLCDNANESIGHLV 459
RL T+DRL ++G+ LC E+ H++
Sbjct: 809 RLGTKDRLVRFGMITDKIWSLCKEVEETQNHIL 841
>ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663533 [Glycine max]
Length = 514
Score = 61.2 bits (147), Expect = 1e-07
Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 2/150 (1%)
Frame = +1
Query: 16 LWNGIRQQFLSFCGICHK-DKL*VRWVHSYYIKSQSIWDVLPKQTS-WVXXXXXXXXXXX 189
LWN + IC K D L V+W+H+Y++K ++ K S W+
Sbjct: 355 LWN-VTAMLKCLWNICSKEDNLWVKWIHAYFLKGDNVMSATIKSNSTWILKSVMKQRPQV 413
Query: 190 XXAGYSYTNYLNMPNFSIQKFYRQLQP*FPKVPWRKMIYNNYGLPKWIFTFRVAATGRLY 369
+ L FS+++ Y +L K+ W +++ N P+ T +A RL
Sbjct: 414 NNLQLVWIEMLRKRKFSMKQVYMELVEDHNKIDWFRLLRYNRARPRANVTLWLACQNRLA 473
Query: 370 TRDRLAKWGITNTLDCPLCDNANESIGHLV 459
T+ RL + C LC +E + HL+
Sbjct: 474 TKTRLKNMNMIQCSLCSLCKEQDEDLDHLM 503
>ref|XP_004229147.1| PREDICTED: uncharacterized protein LOC101247059 [Solanum
lycopersicum]
Length = 133
Score = 59.7 bits (143), Expect = 4e-07
Identities = 28/72 (38%), Positives = 43/72 (59%)
Frame = +1
Query: 241 IQKFYRQLQP*FPKVPWRKMIYNNYGLPKWIFTFRVAATGRLYTRDRLAKWGITNTLDCP 420
+++ Y L+ PK W+ +++ N PK IFT + +L T DRLAKWG+T+ C
Sbjct: 2 VKQIYDYLRGEKPKPVWKCLMFKNTERPKAIFTLWILMYRKLATVDRLAKWGLTHDTACV 61
Query: 421 LCDNANESIGHL 456
LC N +ES+ H+
Sbjct: 62 LCTNMDESLDHM 73
>ref|NP_063979.1| orf315 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
gi|323435090|ref|YP_004222308.1| hypothetical protein
BevumaM_p073 [Beta vulgaris subsp. maritima]
gi|346683181|ref|YP_004842113.1| hypothetical protein
BemaM_p068 [Beta macrocarpa] gi|9049281|dbj|BAA99291.1|
orf315 [Beta vulgaris subsp. vulgaris]
gi|319439823|emb|CBJ17535.1| hypothetical protein [Beta
vulgaris subsp. maritima] gi|345500099|emb|CBX24917.1|
hypothetical protein [Beta macrocarpa]
Length = 315
Score = 59.3 bits (142), Expect = 5e-07
Identities = 28/74 (37%), Positives = 40/74 (54%)
Frame = +1
Query: 235 FSIQKFYRQLQP*FPKVPWRKMIYNNYGLPKWIFTFRVAATGRLYTRDRLAKWGITNTLD 414
F I+K Y ++P +V W+++I NN PK +F + RLYT+DR+A W +
Sbjct: 5 FQIKKLYELIRPSAARVHWKRIICNNKASPKSLFITWLGIQNRLYTKDRMANWNLACDPV 64
Query: 415 CPLCDNANESIGHL 456
C LC ES HL
Sbjct: 65 CVLCGQGAESAQHL 78
>gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00078 [Arabidopsis
thaliana]
Length = 1253
Score = 58.5 bits (140), Expect = 9e-07
Identities = 29/75 (38%), Positives = 40/75 (53%)
Frame = +1
Query: 235 FSIQKFYRQLQP*FPKVPWRKMIYNNYGLPKWIFTFRVAATGRLYTRDRLAKWGITNTLD 414
FS + + ++P P W K ++ +PK F V+ RL TR RLA WG+T T D
Sbjct: 904 FSAARTWEAMRPKKPVKDWTKSVWFKGSVPKHAFNMWVSHLNRLPTRQRLAAWGVTTTTD 963
Query: 415 CPLCDNANESIGHLV 459
C LC + ES HL+
Sbjct: 964 CCLCSSRPESRDHLL 978
>ref|XP_004253503.1| PREDICTED: uncharacterized protein LOC101243694 [Solanum
lycopersicum]
Length = 177
Score = 57.4 bits (137), Expect = 2e-06
Identities = 27/72 (37%), Positives = 41/72 (56%)
Frame = +1
Query: 241 IQKFYRQLQP*FPKVPWRKMIYNNYGLPKWIFTFRVAATGRLYTRDRLAKWGITNTLDCP 420
+++ Y L+ K W+ +++ N PK IFT + +L T DRLAKWG+ + C
Sbjct: 2 VKQLYDYLRGDQAKPEWKGLMFKNAARPKAIFTLWILLNRKLATIDRLAKWGVVHDPTCV 61
Query: 421 LCDNANESIGHL 456
LC A+ES+ HL
Sbjct: 62 LCKGADESLDHL 73
>gb|AAD26953.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
thaliana]
Length = 323
Score = 57.0 bits (136), Expect = 3e-06
Identities = 30/74 (40%), Positives = 41/74 (55%)
Frame = +1
Query: 235 FSIQKFYRQLQP*FPKVPWRKMIYNNYGLPKWIFTFRVAATGRLYTRDRLAKWGITNTLD 414
FS K + L P VPW+K ++ +PK F VAA RL+TRDRL +WG+
Sbjct: 136 FSASKTWTALNPDGVLVPWQKSVWFKDRIPKHAFICWVAAWKRLHTRDRLTQWGLNIPTV 195
Query: 415 CPLCDNANESIGHL 456
C LC+ +E+ HL
Sbjct: 196 CVLCNVVDETHDHL 209
>gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CAB80742.1|
AT4g02490 [Arabidopsis thaliana]
Length = 657
Score = 56.2 bits (134), Expect = 4e-06
Identities = 29/74 (39%), Positives = 39/74 (52%)
Frame = +1
Query: 235 FSIQKFYRQLQP*FPKVPWRKMIYNNYGLPKWIFTFRVAATGRLYTRDRLAKWGITNTLD 414
FS +R LQP V W K ++ +PK F V A RL+TRDRL WG+ +
Sbjct: 564 FSTADTWRALQPFSVSVSWHKAVWFTNQVPKHAFISWVTAWNRLHTRDRLRSWGLIVPAE 623
Query: 415 CPLCDNANESIGHL 456
C LC+ +E+ HL
Sbjct: 624 CVLCNLVDETRDHL 637
>ref|NP_567266.1| RNA-directed DNA polymerase (reverse transcriptase)-related family
protein [Arabidopsis thaliana]
gi|5732057|gb|AAD48956.1|AF149414_5 contains similarity
to a family of Arabidopsis thaliana predicted proteins,
which have similarity to reverse transcriptases; see
T14P8.10 (GB:AF069298) [Arabidopsis thaliana]
gi|7267223|emb|CAB80830.1| AT4g04650 [Arabidopsis
thaliana] gi|332657009|gb|AEE82409.1| RNA-directed DNA
polymerase (reverse transcriptase)-related family
protein [Arabidopsis thaliana]
Length = 332
Score = 56.2 bits (134), Expect = 4e-06
Identities = 28/74 (37%), Positives = 40/74 (54%)
Frame = +1
Query: 235 FSIQKFYRQLQP*FPKVPWRKMIYNNYGLPKWIFTFRVAATGRLYTRDRLAKWGITNTLD 414
FS + + L P VPW K ++ +PK F V A RL+TRDRL WG++ +
Sbjct: 111 FSAPRTWSALHPQSHTVPWHKAVWFKNHVPKHAFICWVVAWNRLHTRDRLQNWGLSIPAE 170
Query: 415 CPLCDNANESIGHL 456
C LC+ ++S HL
Sbjct: 171 CLLCNAHDDSRAHL 184
>gb|ABK28243.1| unknown [Arabidopsis thaliana]
Length = 297
Score = 56.2 bits (134), Expect = 4e-06
Identities = 28/74 (37%), Positives = 40/74 (54%)
Frame = +1
Query: 235 FSIQKFYRQLQP*FPKVPWRKMIYNNYGLPKWIFTFRVAATGRLYTRDRLAKWGITNTLD 414
FS + + L P VPW K ++ +PK F V A RL+TRDRL WG++ +
Sbjct: 111 FSAPRTWSALHPQSHTVPWHKAVWFKNHVPKHAFICWVVAWNRLHTRDRLQNWGLSIPAE 170
Query: 415 CPLCDNANESIGHL 456
C LC+ ++S HL
Sbjct: 171 CLLCNAHDDSRAHL 184
>gb|ABE65512.1| hypothetical protein At4g04650 [Arabidopsis thaliana]
Length = 296
Score = 56.2 bits (134), Expect = 4e-06
Identities = 28/74 (37%), Positives = 40/74 (54%)
Frame = +1
Query: 235 FSIQKFYRQLQP*FPKVPWRKMIYNNYGLPKWIFTFRVAATGRLYTRDRLAKWGITNTLD 414
FS + + L P VPW K ++ +PK F V A RL+TRDRL WG++ +
Sbjct: 111 FSAPRTWSALHPQSHTVPWHKAVWFKNHVPKHAFICWVVAWNRLHTRDRLQNWGLSIPAE 170
Query: 415 CPLCDNANESIGHL 456
C LC+ ++S HL
Sbjct: 171 CLLCNAHDDSRAHL 184
>ref|XP_004253303.1| PREDICTED: uncharacterized protein LOC101255781 [Solanum
lycopersicum]
Length = 174
Score = 55.5 bits (132), Expect = 7e-06
Identities = 27/72 (37%), Positives = 40/72 (55%)
Frame = +1
Query: 241 IQKFYRQLQP*FPKVPWRKMIYNNYGLPKWIFTFRVAATGRLYTRDRLAKWGITNTLDCP 420
+++ Y L+ K WR +++ N PK FT + +L T DRLAKWG+T C
Sbjct: 34 MKQIYDYLRGEKTKPEWRCLMFKNAARPKATFTLWILLNRKLATVDRLAKWGLTLDKTCV 93
Query: 421 LCDNANESIGHL 456
LC N +ES+ H+
Sbjct: 94 LCKNMDESLDHM 105