BLASTX nr result
ID: Atropa21_contig00035609
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00035609
(690 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006343557.1| PREDICTED: RING-H2 finger protein ATL56-like... 118 4e-29
ref|XP_004242655.1| PREDICTED: RING-H2 finger protein ATL14-like... 110 9e-27
ref|XP_004242656.1| PREDICTED: RING-H2 finger protein ATL14-like... 110 9e-27
ref|XP_006845515.1| hypothetical protein AMTR_s00019p00162990 [A... 81 4e-13
ref|NP_194766.1| RING-H2 finger protein ATL14 [Arabidopsis thali... 77 5e-12
ref|XP_006409124.1| hypothetical protein EUTSA_v10022879mg [Eutr... 76 9e-12
ref|XP_002319423.2| hypothetical protein POPTR_0013s15290g, part... 75 2e-11
ref|XP_006284626.1| hypothetical protein CARUB_v10005857mg [Caps... 75 2e-11
ref|XP_002319425.1| predicted protein [Populus trichocarpa] 75 2e-11
ref|XP_006582527.1| PREDICTED: RING-H2 finger protein ATL47-like... 75 3e-11
gb|EMJ11200.1| hypothetical protein PRUPE_ppa015162mg [Prunus pe... 74 3e-11
ref|XP_002867352.1| zinc finger family protein [Arabidopsis lyra... 74 3e-11
ref|XP_006412714.1| hypothetical protein EUTSA_v10026407mg [Eutr... 74 6e-11
ref|XP_006844232.1| hypothetical protein AMTR_s00006p00267830 [A... 74 6e-11
ref|XP_006298956.1| hypothetical protein CARUB_v10015081mg [Caps... 73 7e-11
dbj|BAH56864.1| AT2G18670 [Arabidopsis thaliana] 73 7e-11
gb|AAM67030.1| putative RING zinc finger protein [Arabidopsis th... 73 7e-11
ref|NP_179457.1| RING-H2 finger protein ATL56 [Arabidopsis thali... 73 7e-11
ref|XP_006648769.1| PREDICTED: RING-H2 finger protein ATL54-like... 72 1e-10
gb|EMT00106.1| RING-H2 finger protein ATL3C [Aegilops tauschii] 72 1e-10
>ref|XP_006343557.1| PREDICTED: RING-H2 finger protein ATL56-like [Solanum tuberosum]
Length = 164
Score = 118 bits (296), Expect(2) = 4e-29
Identities = 61/123 (49%), Positives = 72/123 (58%), Gaps = 7/123 (5%)
Frame = -2
Query: 689 FLKCIVMSIFISXXXXXXXXXXXXXXXXXXXLITSTAFXXXXXXXXRITARNHLP----- 525
F+KC++M++F+S LITSTAF + P
Sbjct: 19 FIKCVIMALFLSLFLIFLLFLGFAALVLLHFLITSTAFHRRHRRRH----HHRFPANQTS 74
Query: 524 --ELPCESYCCGSHVEVVNDCAICLEGFKDNEFVRKLPDCGHVFHVKCVDSWLMRVLNCP 351
+LPC SYC + V DCAICLEGFKD EF RKLPDCGH+FHVKCVDSWLMRVLNCP
Sbjct: 75 SFDLPCVSYCVSQ--QSVRDCAICLEGFKDGEFCRKLPDCGHLFHVKCVDSWLMRVLNCP 132
Query: 350 VCR 342
+CR
Sbjct: 133 ICR 135
Score = 36.2 bits (82), Expect(2) = 4e-29
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -3
Query: 298 DADWKRWWAVGVSG 257
D DWKRWWAVGVSG
Sbjct: 151 DEDWKRWWAVGVSG 164
>ref|XP_004242655.1| PREDICTED: RING-H2 finger protein ATL14-like isoform 1 [Solanum
lycopersicum]
Length = 165
Score = 110 bits (276), Expect(2) = 9e-27
Identities = 59/123 (47%), Positives = 71/123 (57%), Gaps = 7/123 (5%)
Frame = -2
Query: 689 FLKCIVMSIFISXXXXXXXXXXXXXXXXXXXLITSTAFXXXXXXXXRITARNHLP----- 525
F+KC++M++ +S LITSTAF + P
Sbjct: 19 FIKCVIMALILSLFLIFLLFLGFAALVLLHFLITSTAFHRRHRRRH----HHRFPATPTS 74
Query: 524 --ELPCESYCCGSHVEVVNDCAICLEGFKDNEFVRKLPDCGHVFHVKCVDSWLMRVLNCP 351
+LPC SYC GS + DCAICLEGFKD E RKLPDCGH+FHVKCVDSWL+RVLNCP
Sbjct: 75 SFDLPCVSYC-GSQ-QSARDCAICLEGFKDGEICRKLPDCGHLFHVKCVDSWLIRVLNCP 132
Query: 350 VCR 342
+CR
Sbjct: 133 ICR 135
Score = 36.2 bits (82), Expect(2) = 9e-27
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -3
Query: 298 DADWKRWWAVGVSG 257
D DWKRWWAVGVSG
Sbjct: 151 DEDWKRWWAVGVSG 164
>ref|XP_004242656.1| PREDICTED: RING-H2 finger protein ATL14-like isoform 2 [Solanum
lycopersicum]
Length = 164
Score = 110 bits (276), Expect(2) = 9e-27
Identities = 59/123 (47%), Positives = 71/123 (57%), Gaps = 7/123 (5%)
Frame = -2
Query: 689 FLKCIVMSIFISXXXXXXXXXXXXXXXXXXXLITSTAFXXXXXXXXRITARNHLP----- 525
F+KC++M++ +S LITSTAF + P
Sbjct: 19 FIKCVIMALILSLFLIFLLFLGFAALVLLHFLITSTAFHRRHRRRH----HHRFPATPTS 74
Query: 524 --ELPCESYCCGSHVEVVNDCAICLEGFKDNEFVRKLPDCGHVFHVKCVDSWLMRVLNCP 351
+LPC SYC GS + DCAICLEGFKD E RKLPDCGH+FHVKCVDSWL+RVLNCP
Sbjct: 75 SFDLPCVSYC-GSQ-QSARDCAICLEGFKDGEICRKLPDCGHLFHVKCVDSWLIRVLNCP 132
Query: 350 VCR 342
+CR
Sbjct: 133 ICR 135
Score = 36.2 bits (82), Expect(2) = 9e-27
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -3
Query: 298 DADWKRWWAVGVSG 257
D DWKRWWAVGVSG
Sbjct: 151 DEDWKRWWAVGVSG 164
>ref|XP_006845515.1| hypothetical protein AMTR_s00019p00162990 [Amborella trichopoda]
gi|548848087|gb|ERN07190.1| hypothetical protein
AMTR_s00019p00162990 [Amborella trichopoda]
Length = 147
Score = 80.9 bits (198), Expect = 4e-13
Identities = 38/66 (57%), Positives = 45/66 (68%), Gaps = 2/66 (3%)
Frame = -2
Query: 530 LPELPCESYCCGS--HVEVVNDCAICLEGFKDNEFVRKLPDCGHVFHVKCVDSWLMRVLN 357
L +LPC +Y G E+ +DCAICL+ F + R LP CGH FHVKCVDSWLM+V
Sbjct: 50 LQKLPCFNYQVGEKRETELSSDCAICLDIFMKGDKCRLLPFCGHSFHVKCVDSWLMKVPR 109
Query: 356 CPVCRA 339
CPVCRA
Sbjct: 110 CPVCRA 115
>ref|NP_194766.1| RING-H2 finger protein ATL14 [Arabidopsis thaliana]
gi|75335742|sp|Q9M0C3.1|ATL14_ARATH RecName:
Full=RING-H2 finger protein ATL14
gi|7269937|emb|CAB81030.1| putative protein [Arabidopsis
thaliana] gi|26452869|dbj|BAC43513.1| unknown protein
[Arabidopsis thaliana] gi|28973289|gb|AAO63969.1|
unknown protein [Arabidopsis thaliana]
gi|332660357|gb|AEE85757.1| RING-H2 finger protein ATL14
[Arabidopsis thaliana]
Length = 176
Score = 77.0 bits (188), Expect = 5e-12
Identities = 31/60 (51%), Positives = 41/60 (68%)
Frame = -2
Query: 521 LPCESYCCGSHVEVVNDCAICLEGFKDNEFVRKLPDCGHVFHVKCVDSWLMRVLNCPVCR 342
LP YC S +DC +C++GF+ ++ RKLP CGHVFH KCVD WL++V CP+CR
Sbjct: 98 LPQFKYCEPSSEYGGDDCVVCIDGFRQGQWCRKLPRCGHVFHRKCVDLWLIKVSTCPICR 157
>ref|XP_006409124.1| hypothetical protein EUTSA_v10022879mg [Eutrema salsugineum]
gi|557110286|gb|ESQ50577.1| hypothetical protein
EUTSA_v10022879mg [Eutrema salsugineum]
Length = 175
Score = 76.3 bits (186), Expect = 9e-12
Identities = 27/46 (58%), Positives = 36/46 (78%)
Frame = -2
Query: 476 NDCAICLEGFKDNEFVRKLPDCGHVFHVKCVDSWLMRVLNCPVCRA 339
+DC +CL+GF+ ++ R LP CGHVFH KCVDSWL++ CP+CRA
Sbjct: 104 SDCVVCLDGFRQGQWCRNLPGCGHVFHRKCVDSWLLKAATCPICRA 149
>ref|XP_002319423.2| hypothetical protein POPTR_0013s15290g, partial [Populus
trichocarpa] gi|550325904|gb|EEE95346.2| hypothetical
protein POPTR_0013s15290g, partial [Populus trichocarpa]
Length = 168
Score = 75.1 bits (183), Expect = 2e-11
Identities = 31/66 (46%), Positives = 42/66 (63%)
Frame = -2
Query: 539 RNHLPELPCESYCCGSHVEVVNDCAICLEGFKDNEFVRKLPDCGHVFHVKCVDSWLMRVL 360
++ L ++P Y G H++V DC ICL F + E VR LP C H FHVKC+D WL+
Sbjct: 79 KSALGQIPVVPYKSGLHIQVSTDCPICLGEFSEGEKVRVLPQCSHGFHVKCIDRWLLLHS 138
Query: 359 NCPVCR 342
+CP+CR
Sbjct: 139 SCPLCR 144
>ref|XP_006284626.1| hypothetical protein CARUB_v10005857mg [Capsella rubella]
gi|482553331|gb|EOA17524.1| hypothetical protein
CARUB_v10005857mg [Capsella rubella]
Length = 179
Score = 75.1 bits (183), Expect = 2e-11
Identities = 27/45 (60%), Positives = 36/45 (80%)
Frame = -2
Query: 476 NDCAICLEGFKDNEFVRKLPDCGHVFHVKCVDSWLMRVLNCPVCR 342
+DC +C++GF+ ++ RKLP CGHVFH KCVD WLM+V CP+CR
Sbjct: 113 DDCVVCIDGFRQGQWCRKLPRCGHVFHRKCVDLWLMKVPTCPICR 157
>ref|XP_002319425.1| predicted protein [Populus trichocarpa]
Length = 128
Score = 75.1 bits (183), Expect = 2e-11
Identities = 31/66 (46%), Positives = 42/66 (63%)
Frame = -2
Query: 539 RNHLPELPCESYCCGSHVEVVNDCAICLEGFKDNEFVRKLPDCGHVFHVKCVDSWLMRVL 360
++ L ++P Y G H++V DC ICL F + E VR LP C H FHVKC+D WL+
Sbjct: 59 KSALGQIPVVPYKSGLHIQVSTDCPICLGEFSEGEKVRVLPQCSHGFHVKCIDRWLLLHS 118
Query: 359 NCPVCR 342
+CP+CR
Sbjct: 119 SCPLCR 124
>ref|XP_006582527.1| PREDICTED: RING-H2 finger protein ATL47-like [Glycine max]
Length = 150
Score = 74.7 bits (182), Expect = 3e-11
Identities = 33/73 (45%), Positives = 44/73 (60%), Gaps = 9/73 (12%)
Frame = -2
Query: 533 HLPELPCESY---------CCGSHVEVVNDCAICLEGFKDNEFVRKLPDCGHVFHVKCVD 381
+L LPC Y CCG + DCA+CLE FK + R LP+CGH FHV+C+D
Sbjct: 59 NLKNLPCFEYEEKACKEKGCCG-----LVDCAVCLENFKIGDVCRLLPNCGHSFHVQCID 113
Query: 380 SWLMRVLNCPVCR 342
SW+++ CP+CR
Sbjct: 114 SWILQTPVCPICR 126
>gb|EMJ11200.1| hypothetical protein PRUPE_ppa015162mg [Prunus persica]
Length = 145
Score = 74.3 bits (181), Expect = 3e-11
Identities = 30/60 (50%), Positives = 39/60 (65%)
Frame = -2
Query: 521 LPCESYCCGSHVEVVNDCAICLEGFKDNEFVRKLPDCGHVFHVKCVDSWLMRVLNCPVCR 342
LPC Y G + DCA+CLE FK E R+LP+C H FH +C+D+WL++ CPVCR
Sbjct: 59 LPCFDYMAGEKGTSLVDCAVCLENFKAGERCRQLPNCRHNFHAQCIDTWLLKTPVCPVCR 118
>ref|XP_002867352.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297313188|gb|EFH43611.1| zinc finger family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 169
Score = 74.3 bits (181), Expect = 3e-11
Identities = 29/60 (48%), Positives = 41/60 (68%)
Frame = -2
Query: 521 LPCESYCCGSHVEVVNDCAICLEGFKDNEFVRKLPDCGHVFHVKCVDSWLMRVLNCPVCR 342
LP +C + +DC +C++GF+ ++ RKLP CGHVFH KCVD WL++V CP+CR
Sbjct: 98 LPQFKFCEPNTEYGSDDCVVCIDGFRQGQWCRKLPRCGHVFHRKCVDLWLIKVSTCPICR 157
>ref|XP_006412714.1| hypothetical protein EUTSA_v10026407mg [Eutrema salsugineum]
gi|557113884|gb|ESQ54167.1| hypothetical protein
EUTSA_v10026407mg [Eutrema salsugineum]
Length = 169
Score = 73.6 bits (179), Expect = 6e-11
Identities = 26/48 (54%), Positives = 37/48 (77%)
Frame = -2
Query: 485 EVVNDCAICLEGFKDNEFVRKLPDCGHVFHVKCVDSWLMRVLNCPVCR 342
E +DC +C++GF+ ++ R+LP CGHVFH KCVD WL++V CP+CR
Sbjct: 110 EYGSDCVVCIDGFRQGQWCRRLPGCGHVFHRKCVDLWLIKVSTCPICR 157
>ref|XP_006844232.1| hypothetical protein AMTR_s00006p00267830 [Amborella trichopoda]
gi|548846631|gb|ERN05907.1| hypothetical protein
AMTR_s00006p00267830 [Amborella trichopoda]
Length = 169
Score = 73.6 bits (179), Expect = 6e-11
Identities = 31/67 (46%), Positives = 41/67 (61%)
Frame = -2
Query: 542 ARNHLPELPCESYCCGSHVEVVNDCAICLEGFKDNEFVRKLPDCGHVFHVKCVDSWLMRV 363
+R L LPC Y G + DCA+CL+GF+ + R LP C H FH +CVDSWL++
Sbjct: 64 SREDLQRLPCFDYKTGDKEKGPIDCAVCLDGFQGGDKCRLLPICKHSFHAQCVDSWLLKA 123
Query: 362 LNCPVCR 342
CP+CR
Sbjct: 124 PICPICR 130
>ref|XP_006298956.1| hypothetical protein CARUB_v10015081mg [Capsella rubella]
gi|482567665|gb|EOA31854.1| hypothetical protein
CARUB_v10015081mg [Capsella rubella]
Length = 178
Score = 73.2 bits (178), Expect = 7e-11
Identities = 25/46 (54%), Positives = 35/46 (76%)
Frame = -2
Query: 476 NDCAICLEGFKDNEFVRKLPDCGHVFHVKCVDSWLMRVLNCPVCRA 339
+DC +C +GF+ ++ R LP CGHVFH KCVD+WL++ CP+CRA
Sbjct: 105 SDCVVCFDGFRQGQWCRNLPGCGHVFHRKCVDTWLLKASTCPICRA 150
>dbj|BAH56864.1| AT2G18670 [Arabidopsis thaliana]
Length = 173
Score = 73.2 bits (178), Expect = 7e-11
Identities = 25/46 (54%), Positives = 35/46 (76%)
Frame = -2
Query: 476 NDCAICLEGFKDNEFVRKLPDCGHVFHVKCVDSWLMRVLNCPVCRA 339
+DC +C +GF+ ++ R LP CGHVFH KCVD+WL++ CP+CRA
Sbjct: 100 SDCVVCFDGFRQGQWCRNLPGCGHVFHRKCVDTWLLKASTCPICRA 145
>gb|AAM67030.1| putative RING zinc finger protein [Arabidopsis thaliana]
Length = 181
Score = 73.2 bits (178), Expect = 7e-11
Identities = 25/46 (54%), Positives = 35/46 (76%)
Frame = -2
Query: 476 NDCAICLEGFKDNEFVRKLPDCGHVFHVKCVDSWLMRVLNCPVCRA 339
+DC +C +GF+ ++ R LP CGHVFH KCVD+WL++ CP+CRA
Sbjct: 108 SDCVVCFDGFRQGQWCRNLPGCGHVFHRKCVDTWLLKASTCPICRA 153
>ref|NP_179457.1| RING-H2 finger protein ATL56 [Arabidopsis thaliana]
gi|75339071|sp|Q9ZV51.1|ATL56_ARATH RecName:
Full=RING-H2 finger protein ATL56
gi|4185133|gb|AAD08936.1| putative RING zinc finger
protein [Arabidopsis thaliana]
gi|15450663|gb|AAK96603.1| At2g18670/MSF3.5 [Arabidopsis
thaliana] gi|20466087|gb|AAM19965.1| At2g18670/MSF3.5
[Arabidopsis thaliana] gi|66865918|gb|AAY57593.1| RING
finger family protein [Arabidopsis thaliana]
gi|330251697|gb|AEC06791.1| RING-H2 finger protein ATL56
[Arabidopsis thaliana]
Length = 181
Score = 73.2 bits (178), Expect = 7e-11
Identities = 25/46 (54%), Positives = 35/46 (76%)
Frame = -2
Query: 476 NDCAICLEGFKDNEFVRKLPDCGHVFHVKCVDSWLMRVLNCPVCRA 339
+DC +C +GF+ ++ R LP CGHVFH KCVD+WL++ CP+CRA
Sbjct: 108 SDCVVCFDGFRQGQWCRNLPGCGHVFHRKCVDTWLLKASTCPICRA 153
>ref|XP_006648769.1| PREDICTED: RING-H2 finger protein ATL54-like [Oryza brachyantha]
Length = 349
Score = 72.4 bits (176), Expect = 1e-10
Identities = 28/56 (50%), Positives = 38/56 (67%)
Frame = -2
Query: 506 YCCGSHVEVVNDCAICLEGFKDNEFVRKLPDCGHVFHVKCVDSWLMRVLNCPVCRA 339
Y G+ + DC++CL F+D E +R LP CGH FHV C+D+WL +NCP+CRA
Sbjct: 138 YRAGAGMLGATDCSVCLGEFRDGELLRLLPKCGHAFHVPCIDAWLRAHVNCPLCRA 193
>gb|EMT00106.1| RING-H2 finger protein ATL3C [Aegilops tauschii]
Length = 106
Score = 72.4 bits (176), Expect = 1e-10
Identities = 37/67 (55%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Frame = -2
Query: 539 RNHLPELPCESYCCGSHVEVVND-CAICLEGFKDNEFVRKLPDCGHVFHVKCVDSWLMRV 363
R L LP E Y G EV++D CAICL F D E VR LP CGH FHV+CVD+WL+
Sbjct: 10 RRVLRSLPVEVYGSG---EVIDDVCAICLGEFVDGEKVRVLPQCGHGFHVRCVDAWLVSH 66
Query: 362 LNCPVCR 342
+CP CR
Sbjct: 67 SSCPTCR 73