BLASTX nr result
ID: Atropa21_contig00035594
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00035594
(1673 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein A... 69 4e-20
ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein A... 63 5e-16
ref|XP_006354689.1| PREDICTED: uncharacterized protein LOC102605... 69 5e-09
gb|EOY06960.1| Uncharacterized protein TCM_021522 [Theobroma cacao] 46 1e-07
gb|EOY17513.1| Uncharacterized protein TCM_036737 [Theobroma cacao] 48 2e-06
>ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 885
Score = 68.9 bits (167), Expect(2) = 4e-20
Identities = 29/103 (28%), Positives = 54/103 (52%)
Frame = +3
Query: 552 FVGSAGFNISEKQLS*IITLWWEAAVSQYIKRIYQVVPAIIVWELWKRRNTILHRGKVSI 731
F AG NI L +I WW+ + ++ IY+ +PAII+W LWKRRN + H +S
Sbjct: 591 FAHFAGINIDGMHLQQLIISWWKHEATPKLQGIYKAIPAIIMWTLWKRRNALKHDSSISW 650
Query: 732 NKLKYQIMHTLNLFMKTNMKNFRYESYSWMNLLKALHDYSPKL 860
++ ++ + +K+ + ++W +++ L+ Y K+
Sbjct: 651 ERMVEMVIEVVRKMVKSQFPWIKNMRWTWQAIIQRLNQYKRKI 693
Score = 57.8 bits (138), Expect(2) = 4e-20
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 4/76 (5%)
Frame = +2
Query: 338 KETKKTCWFLIHKNL----SFFMWRLWKFKLSMDDTLKKWGIQLASICNCCEIPKEKIIA 505
+E ++ C + +K L +FFMWR+WK +++ DD LKK I + S C CC+ KE+ +
Sbjct: 516 QEVRRDCEVIWNKELPFKINFFMWRVWKRRIATDDNLKKMRINIVSRCWCCDRKKEETMT 575
Query: 506 RVFRKFTVAQIIWSNF 553
+F + +W F
Sbjct: 576 HLFPTAPITYKLWRYF 591
>ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 1035
Score = 63.2 bits (152), Expect(2) = 5e-16
Identities = 32/103 (31%), Positives = 50/103 (48%)
Frame = +3
Query: 552 FVGSAGFNISEKQLS*IITLWWEAAVSQYIKRIYQVVPAIIVWELWKRRNTILHRGKVSI 731
F AG I+ L +I WW+ S + +I + V A+I+WELWKRRN+ H + +
Sbjct: 562 FASYAGIIINGLNLQQLIFKWWDYKASNKLSQILKAVLAVIMWELWKRRNSYRHGKETTY 621
Query: 732 NKLKYQIMHTLNLFMKTNMKNFRYESYSWMNLLKALHDYSPKL 860
N + YQ L + + +Y W ++ L +Y P L
Sbjct: 622 NNMYYQCQLILYQLVTIKFPWIKGLTYHWPQVVGMLQNYKPPL 664
Score = 49.7 bits (117), Expect(2) = 5e-16
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Frame = +2
Query: 332 ENKETKKTCWFL-IHKNLSFFMWRLWKFKLSMDDTLKKWGIQLASICNCCEIPKEKIIAR 508
E +E ++ W + +SFF+WR+W+ K++ D LK+ I + S C CC+ + + +
Sbjct: 488 EEEEWRRYMWIKGMPIKISFFLWRVWRRKIATYDNLKRMKIPVVSKCYCCKEGEMETMTH 547
Query: 509 VFRKFTVAQIIWSNF 553
+ +AQ +W F
Sbjct: 548 LLLTAPIAQKLWKQF 562
>ref|XP_006354689.1| PREDICTED: uncharacterized protein LOC102605437 [Solanum tuberosum]
Length = 333
Score = 69.3 bits (168), Expect = 5e-09
Identities = 36/122 (29%), Positives = 60/122 (49%), Gaps = 1/122 (0%)
Frame = +3
Query: 498 LLLVFF-GSLLWHK*FGVIFVGSAGFNISEKQLS*IITLWWEAAVSQYIKRIYQVVPAII 674
L L F+ + LW ++F AG ++ QLS ++ WW + +K + +VVP ++
Sbjct: 37 LFLTFYTAAKLW-----ILFANVAGISLEGLQLSQVVIKWWTSDSCPILKPLMRVVPTVV 91
Query: 675 VWELWKRRNTILHRGKVSINKLKYQIMHTLNLFMKTNMKNFRYESYSWMNLLKALHDYSP 854
+W LWKRRN + H S N L Y++ L +T + W +++ L + P
Sbjct: 92 IWNLWKRRNNLKHGRPSSYNNLVYRVNSDLWKLGRTIYPKLQDFPTKWSDIVACLEKHKP 151
Query: 855 KL 860
KL
Sbjct: 152 KL 153
>gb|EOY06960.1| Uncharacterized protein TCM_021522 [Theobroma cacao]
Length = 3503
Score = 46.2 bits (108), Expect(2) = 1e-07
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Frame = +2
Query: 323 LKVENKETKKTCWFLIHKNL----SFFMWRLWKFKLSMDDTLKKWGIQLASICNCCEIPK 490
L E K T ++ HK++ SFF+WRL + ++ +K G QLAS C CC+
Sbjct: 3148 LSRERKVVNPTYNYIWHKSVPLTTSFFLWRLLHDWVPVELKMKSKGFQLASRCRCCK--S 3205
Query: 491 EKIIARVFRKFTVAQIIWSNFCRI 562
E+ + V VA +WS F ++
Sbjct: 3206 EESLMHVMWDNPVANQVWSYFAKV 3229
Score = 38.5 bits (88), Expect(2) = 1e-07
Identities = 34/131 (25%), Positives = 59/131 (45%), Gaps = 7/131 (5%)
Frame = +3
Query: 600 IITLWWEAAVSQYIKRIYQVVPAIIVWELWKRRNTILHRG-KVSINKLKYQIMHTLN-LF 773
II+ W+ + I +VP I+W LW RN HR + N++ ++I+ ++ LF
Sbjct: 3243 IISAWFYSGDYSKPGHIRTLVPLFILWFLWVERNDAKHRNLGMYPNRIVWKILKLIHQLF 3302
Query: 774 MKTNMKNFRYE-----SYSWMNLLKALHDYSPKLKGYIIATTFLEVESSGRKVINSDKSN 938
++ ++++ + W +LKA+ PKL F S G +N D S+
Sbjct: 3303 QGKQLQKWQWQGDKQIAQEWGIILKAVAPSPPKL-------LFWNKPSIGEFKLNVDGSS 3355
Query: 939 IPYLQIRSAKG 971
LQ + G
Sbjct: 3356 KYNLQTAAGGG 3366
>gb|EOY17513.1| Uncharacterized protein TCM_036737 [Theobroma cacao]
Length = 2215
Score = 47.8 bits (112), Expect(2) = 2e-06
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 4/93 (4%)
Frame = +2
Query: 296 KAGNPILTTLKVENKETKKTCWFLIHKNL----SFFMWRLWKFKLSMDDTLKKWGIQLAS 463
K+ ++ KVEN F+ HK++ SFF+WRL + ++ +K G QLAS
Sbjct: 1855 KSAWQLIRNRKVENPVFN----FIWHKSVPLTTSFFLWRLLHDWIPVELKMKTKGFQLAS 1910
Query: 464 ICNCCEIPKEKIIARVFRKFTVAQIIWSNFCRI 562
C CC+ E+ + V K VA +WS F ++
Sbjct: 1911 RCRCCK--SEESLMHVMWKNPVANQVWSYFAKV 1941
Score = 32.7 bits (73), Expect(2) = 2e-06
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Frame = +3
Query: 600 IITLWWEAAVSQYIKRIYQVVPAIIVWELWKRRNTILHRG-KVSINKLKYQIMHTLN-LF 773
II W+ + I +VP +W LW RN HR + N++ ++I+ L+ LF
Sbjct: 1955 IICAWFYSGDYSKPGHIRTLVPLFTLWFLWVERNDAKHRNLGMYPNRVVWKILKLLHQLF 2014
Query: 774 MKTNMKNFRYE-----SYSWMNLLKALHDYSPKL 860
++ ++++ + W +LKA PKL
Sbjct: 2015 QGKQLQKWQWQGDKQIAQEWGIILKADAPSPPKL 2048