BLASTX nr result
ID: Atropa21_contig00035574
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00035574
(1305 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group] 66 1e-10
gb|ABA95319.1| retrotransposon protein, putative, unclassified [... 63 5e-10
emb|CAE04958.2| OSJNBa0070D17.9 [Oryza sativa Japonica Group] 60 3e-09
ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group] g... 61 9e-09
gb|EEE65753.1| hypothetical protein OsJ_21419 [Oryza sativa Japo... 61 9e-09
emb|CAD41876.2| OSJNBa0041A02.23 [Oryza sativa Japonica Group] 59 3e-08
ref|NP_001053783.1| Os04g0603800 [Oryza sativa Japonica Group] g... 59 4e-08
gb|AAP53789.1| retrotransposon protein, putative, unclassified [... 58 7e-08
emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group] 56 4e-07
gb|ABA97970.1| retrotransposon protein, putative, unclassified, ... 53 4e-07
gb|EMT07282.1| hypothetical protein F775_09518 [Aegilops tauschii] 60 3e-06
gb|AAX95226.1| retrotransposon protein, putative, unclassified [... 59 3e-06
gb|ABA91843.2| retrotransposon protein, putative, unclassified [... 59 3e-06
gb|ABG22014.1| retrotransposon protein, putative, unclassified [... 49 8e-06
>emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]
Length = 1311
Score = 65.9 bits (159), Expect(2) = 1e-10
Identities = 32/73 (43%), Positives = 43/73 (58%)
Frame = +3
Query: 597 LKRRIG*DITPQQQQPACDNEEHILVHPLAIFQRRMVKVNNAVAVQFLVQWTNLGPDAAT 776
LK+ IG + P+ P D+ +IL P A+ +RR++ NNA VQ+ VQW NL AAT
Sbjct: 1236 LKKHIGPKVVPEPGLPLTDDNGNILSQPTAVLERRLIPQNNAPVVQWKVQWANLPLSAAT 1295
Query: 777 WEDWGYIRSQFAA 815
WED +I F A
Sbjct: 1296 WEDAAFISKVFPA 1308
Score = 28.1 bits (61), Expect(2) = 1e-10
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +1
Query: 544 RLKFPVRAQVHPVFHVSR 597
+L P +Q+HPVFHVS+
Sbjct: 1218 KLLLPASSQIHPVFHVSQ 1235
>gb|ABA95319.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 955
Score = 62.8 bits (151), Expect(2) = 5e-10
Identities = 29/71 (40%), Positives = 39/71 (54%)
Frame = +3
Query: 597 LKRRIG*DITPQQQQPACDNEEHILVHPLAIFQRRMVKVNNAVAVQFLVQWTNLGPDAAT 776
LK+ +G P PA + I P+A+ QRRM+ NN Q+L+ W+NL P AT
Sbjct: 880 LKKHLGTHAVPMPNLPAVGPDGQIKTEPVAVLQRRMIPRNNVAVTQWLILWSNLTPAEAT 939
Query: 777 WEDWGYIRSQF 809
WED YI+ F
Sbjct: 940 WEDASYIQKVF 950
Score = 29.3 bits (64), Expect(2) = 5e-10
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 544 RLKFPVRAQVHPVFHVSR*SVVLG 615
RL+ P A +HPVFHVS+ LG
Sbjct: 862 RLQLPEEAAIHPVFHVSQLKKHLG 885
>emb|CAE04958.2| OSJNBa0070D17.9 [Oryza sativa Japonica Group]
Length = 394
Score = 59.7 bits (143), Expect(2) = 3e-09
Identities = 29/71 (40%), Positives = 37/71 (52%)
Frame = +3
Query: 597 LKRRIG*DITPQQQQPACDNEEHILVHPLAIFQRRMVKVNNAVAVQFLVQWTNLGPDAAT 776
LK+ +G P P+ E I P A+ QRRM+ N Q+L+ W NLGP AT
Sbjct: 319 LKKHLGKRAIPMPNLPSVGPEGQIKTQPTAVLQRRMMPRNGVAVTQWLILWENLGPTDAT 378
Query: 777 WEDWGYIRSQF 809
WED IR+ F
Sbjct: 379 WEDADVIRNMF 389
Score = 30.0 bits (66), Expect(2) = 3e-09
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +1
Query: 544 RLKFPVRAQVHPVFHVSR*SVVLGK 618
RL+ P A +HPVFHVS+ LGK
Sbjct: 301 RLQLPNDATIHPVFHVSQLKKHLGK 325
>ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group]
gi|255677065|dbj|BAF19594.2| Os06g0493000 [Oryza sativa
Japonica Group]
Length = 866
Score = 61.2 bits (147), Expect(2) = 9e-09
Identities = 30/71 (42%), Positives = 39/71 (54%)
Frame = +3
Query: 597 LKRRIG*DITPQQQQPACDNEEHILVHPLAIFQRRMVKVNNAVAVQFLVQWTNLGPDAAT 776
LK+ +G P+Q P D E IL PLA+ RR++ NN VQ+ + W NL AAT
Sbjct: 791 LKKHLGSRAVPEQGLPLIDAEGRILSTPLAVLDRRLIPRNNEPVVQWKIHWANLPESAAT 850
Query: 777 WEDWGYIRSQF 809
WED +I F
Sbjct: 851 WEDAAFITKVF 861
Score = 26.6 bits (57), Expect(2) = 9e-09
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 544 RLKFPVRAQVHPVFHVSR*SVVLG 615
+L PV +Q+H VFHVS+ LG
Sbjct: 773 KLLLPVTSQIHHVFHVSQLKKHLG 796
>gb|EEE65753.1| hypothetical protein OsJ_21419 [Oryza sativa Japonica Group]
Length = 645
Score = 61.2 bits (147), Expect(2) = 9e-09
Identities = 30/71 (42%), Positives = 39/71 (54%)
Frame = +3
Query: 597 LKRRIG*DITPQQQQPACDNEEHILVHPLAIFQRRMVKVNNAVAVQFLVQWTNLGPDAAT 776
LK+ +G P+Q P D E IL PLA+ RR++ NN VQ+ + W NL AAT
Sbjct: 570 LKKHLGSRAVPEQGLPLIDAEGRILSTPLAVLDRRLIPRNNEPVVQWKIHWANLPESAAT 629
Query: 777 WEDWGYIRSQF 809
WED +I F
Sbjct: 630 WEDAAFITKVF 640
Score = 26.6 bits (57), Expect(2) = 9e-09
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 544 RLKFPVRAQVHPVFHVSR*SVVLG 615
+L PV +Q+H VFHVS+ LG
Sbjct: 552 KLLLPVTSQIHHVFHVSQLKKHLG 575
>emb|CAD41876.2| OSJNBa0041A02.23 [Oryza sativa Japonica Group]
Length = 1373
Score = 59.3 bits (142), Expect(2) = 3e-08
Identities = 27/71 (38%), Positives = 40/71 (56%)
Frame = +3
Query: 597 LKRRIG*DITPQQQQPACDNEEHILVHPLAIFQRRMVKVNNAVAVQFLVQWTNLGPDAAT 776
LK+ +G + P P D + +I P+A+ RR+V N Q+LV W NL P+ AT
Sbjct: 1298 LKKHVGNLVVPLPNLPLVDEDGNIKTEPVAVLARRVVPRRNEPVTQWLVHWENLSPEDAT 1357
Query: 777 WEDWGYIRSQF 809
WED +I++ F
Sbjct: 1358 WEDSAFIQATF 1368
Score = 26.6 bits (57), Expect(2) = 3e-08
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 547 LKFPVRAQVHPVFHVSR 597
L+ P A +HPVFHVS+
Sbjct: 1281 LQLPEEAGIHPVFHVSQ 1297
>ref|NP_001053783.1| Os04g0603800 [Oryza sativa Japonica Group]
gi|113565354|dbj|BAF15697.1| Os04g0603800, partial
[Oryza sativa Japonica Group]
Length = 123
Score = 59.3 bits (142), Expect(2) = 4e-08
Identities = 27/71 (38%), Positives = 40/71 (56%)
Frame = +3
Query: 597 LKRRIG*DITPQQQQPACDNEEHILVHPLAIFQRRMVKVNNAVAVQFLVQWTNLGPDAAT 776
LK+ +G + P P D + +I P+A+ RR+V N Q+LV W NL P+ AT
Sbjct: 48 LKKHVGNLVVPLPNLPLVDEDGNIKTEPVAVLARRVVPRRNEPVTQWLVHWENLSPEDAT 107
Query: 777 WEDWGYIRSQF 809
WED +I++ F
Sbjct: 108 WEDSAFIQATF 118
Score = 26.6 bits (57), Expect(2) = 4e-08
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 547 LKFPVRAQVHPVFHVSR 597
L+ P A +HPVFHVS+
Sbjct: 31 LQLPEEAGIHPVFHVSQ 47
>gb|AAP53789.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1611
Score = 58.2 bits (139), Expect(2) = 7e-08
Identities = 28/71 (39%), Positives = 38/71 (53%)
Frame = +3
Query: 597 LKRRIG*DITPQQQQPACDNEEHILVHPLAIFQRRMVKVNNAVAVQFLVQWTNLGPDAAT 776
LK+ +G P PA + I P A+ QRRM+ +N Q+L+ W NL P AT
Sbjct: 1536 LKKHLGARAIPMPNLPAIGPDGQIKTEPAAVLQRRMIPRHNEPVTQWLILWENLTPAEAT 1595
Query: 777 WEDWGYIRSQF 809
WED YI++ F
Sbjct: 1596 WEDASYIQAAF 1606
Score = 26.6 bits (57), Expect(2) = 7e-08
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 544 RLKFPVRAQVHPVFHVSR*SVVLG 615
+L+ P A +HPVFHVS+ LG
Sbjct: 1518 KLQLPDGAGIHPVFHVSQLKKHLG 1541
>emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]
Length = 1586
Score = 55.8 bits (133), Expect(2) = 4e-07
Identities = 27/71 (38%), Positives = 36/71 (50%)
Frame = +3
Query: 597 LKRRIG*DITPQQQQPACDNEEHILVHPLAIFQRRMVKVNNAVAVQFLVQWTNLGPDAAT 776
LK+ IG P P+ + I P+A+ +RRM+ Q+LV W NL P AT
Sbjct: 1511 LKKHIGSRAVPMANLPSVGPDGQIKTEPVAVLKRRMIPRGGVAVTQWLVLWHNLSPSEAT 1570
Query: 777 WEDWGYIRSQF 809
WED I+S F
Sbjct: 1571 WEDASMIQSMF 1581
Score = 26.2 bits (56), Expect(2) = 4e-07
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +1
Query: 544 RLKFPVRAQVHPVFHVSR 597
+L+ P + +HPVFHVS+
Sbjct: 1493 KLQLPEGSNIHPVFHVSQ 1510
>gb|ABA97970.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
Length = 1548
Score = 53.1 bits (126), Expect(2) = 4e-07
Identities = 23/44 (52%), Positives = 31/44 (70%)
Frame = +3
Query: 678 PLAIFQRRMVKVNNAVAVQFLVQWTNLGPDAATWEDWGYIRSQF 809
P A+ +RR+VK NA VQ LVQW +L P ATWED+ +R++F
Sbjct: 1484 PSAVLERRLVKKGNAAIVQVLVQWGSLPPALATWEDYDVVRTRF 1527
Score = 28.9 bits (63), Expect(2) = 4e-07
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 544 RLKFPVRAQVHPVFHVSR 597
RLK P + +HPVFHVS+
Sbjct: 1439 RLKLPADSLIHPVFHVSQ 1456
>gb|EMT07282.1| hypothetical protein F775_09518 [Aegilops tauschii]
Length = 947
Score = 59.7 bits (143), Expect = 3e-06
Identities = 26/71 (36%), Positives = 40/71 (56%)
Frame = +3
Query: 597 LKRRIG*DITPQQQQPACDNEEHILVHPLAIFQRRMVKVNNAVAVQFLVQWTNLGPDAAT 776
LKR IG + P + P + HI P+ + Q R++ NN +Q+LVQW N P+ ++
Sbjct: 60 LKRHIGPTVVPCENLPLITEDGHIKQEPVMVLQMRLIPRNNLPVIQWLVQWENFPPEDSS 119
Query: 777 WEDWGYIRSQF 809
WED +I+ F
Sbjct: 120 WEDADFIKHTF 130
>gb|AAX95226.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1513
Score = 59.3 bits (142), Expect = 3e-06
Identities = 27/71 (38%), Positives = 38/71 (53%)
Frame = +3
Query: 597 LKRRIG*DITPQQQQPACDNEEHILVHPLAIFQRRMVKVNNAVAVQFLVQWTNLGPDAAT 776
LK+ +G P P+ + I P+A+ QRRM+ N Q+L+ W NLGP AT
Sbjct: 1438 LKKHLGQRAVPMSNLPSMGPDGQIKTQPVAVLQRRMIPRNGVAVTQWLILWENLGPADAT 1497
Query: 777 WEDWGYIRSQF 809
WED I+S +
Sbjct: 1498 WEDAAVIQSMY 1508
>gb|ABA91843.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1411
Score = 59.3 bits (142), Expect = 3e-06
Identities = 27/71 (38%), Positives = 38/71 (53%)
Frame = +3
Query: 597 LKRRIG*DITPQQQQPACDNEEHILVHPLAIFQRRMVKVNNAVAVQFLVQWTNLGPDAAT 776
LK+ +G P P+ + I P+A+ QRRM+ N Q+L+ W NLGP AT
Sbjct: 1336 LKKHLGQRAVPMSNLPSMGPDGQIKTQPVAVLQRRMIPRNGVAVTQWLILWENLGPADAT 1395
Query: 777 WEDWGYIRSQF 809
WED I+S +
Sbjct: 1396 WEDAAVIQSMY 1406
>gb|ABG22014.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1422
Score = 49.3 bits (116), Expect(2) = 8e-06
Identities = 24/62 (38%), Positives = 31/62 (50%)
Frame = +3
Query: 597 LKRRIG*DITPQQQQPACDNEEHILVHPLAIFQRRMVKVNNAVAVQFLVQWTNLGPDAAT 776
LK+ +G P PA E I P+AI +RRM+ Q+LV W NL P AT
Sbjct: 1358 LKKHLGSHAVPMANLPAAGPEGQIKTEPVAIMRRRMIPRRGVAVTQWLVFWKNLSPADAT 1417
Query: 777 WE 782
W+
Sbjct: 1418 WK 1419
Score = 28.5 bits (62), Expect(2) = 8e-06
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 544 RLKFPVRAQVHPVFHVSR*SVVLG 615
+L+ P A +HPVFHVS+ LG
Sbjct: 1340 KLQLPAEALIHPVFHVSQLKKHLG 1363