BLASTX nr result

ID: Atropa21_contig00035509 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00035509
         (506 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006348364.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   247   1e-63
ref|XP_004244319.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   233   2e-59

>ref|XP_006348364.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like isoform X1
           [Solanum tuberosum] gi|565363279|ref|XP_006348365.1|
           PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like
           isoform X2 [Solanum tuberosum]
          Length = 966

 Score =  247 bits (631), Expect = 1e-63
 Identities = 129/174 (74%), Positives = 144/174 (82%), Gaps = 6/174 (3%)
 Frame = +3

Query: 3   YNEAQYRDNNLSQSWLGKTSPDGVIETPIVTPLAPIAVSVAMDTSVALKVERQSVDKRVY 182
           Y EAQY DNNL+QSWLGKTSPDGV ETPIVTP+API VSVA DTS + KV R+SVDKRV+
Sbjct: 144 YVEAQYNDNNLNQSWLGKTSPDGVTETPIVTPVAPITVSVATDTSGSPKVGRRSVDKRVH 203

Query: 183 KGNSDILRREEGTMSESSEQATQFRNQKSKEREYMLPEHDSAADGFNSEHADVMNTMGEC 362
           KGN DILRR +GTMSESSE+A+Q R   S++ + +L EHDS ADGFN EH DVMNTMGEC
Sbjct: 204 KGNRDILRRGDGTMSESSERASQSR---SRDGDAILSEHDSIADGFNCEHTDVMNTMGEC 260

Query: 363 HRLQKQREHISRNHRHVSSSLNLEGHETSTCKNEK-LIDE-----ESIVTSTPA 506
           H LQKQ+EHISRNHRHVSSSLNLEGHETS CKN+K LIDE     E +VT TPA
Sbjct: 261 HMLQKQKEHISRNHRHVSSSLNLEGHETSACKNQKELIDEKSLTREGVVTGTPA 314


>ref|XP_004244319.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like [Solanum
           lycopersicum]
          Length = 966

 Score =  233 bits (595), Expect = 2e-59
 Identities = 124/174 (71%), Positives = 141/174 (81%), Gaps = 6/174 (3%)
 Frame = +3

Query: 3   YNEAQYRDNNLSQSWLGKTSPDGVIETPIVTPLAPIAVSVAMDTSVALKVERQSVDKRVY 182
           Y EAQY DNNL+Q WLGKTSPDGV ETPIVTP+API VSVA +TS + KV R+SVDKRV+
Sbjct: 144 YVEAQYSDNNLNQLWLGKTSPDGVTETPIVTPVAPITVSVATNTSGSPKVGRRSVDKRVH 203

Query: 183 KGNSDILRREEGTMSESSEQATQFRNQKSKEREYMLPEHDSAADGFNSEHADVMNTMGEC 362
           KGN DILRR +GTMSESSE+A+Q R   S++ + ML EHDS ADGF SEH D+MNTMGE 
Sbjct: 204 KGNRDILRRGDGTMSESSERASQSR---SRDGDSMLSEHDSIADGFISEHTDLMNTMGER 260

Query: 363 HRLQKQREHISRNHRHVSSSLNLEGHETSTCKNEK-LIDE-----ESIVTSTPA 506
           H LQKQ+EHISRNHRHVSSS NLEGHET+ CKN+K LIDE     E +VT TPA
Sbjct: 261 HMLQKQKEHISRNHRHVSSSSNLEGHETNACKNQKELIDEKSLTREGVVTGTPA 314


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