BLASTX nr result

ID: Atropa21_contig00035426 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00035426
         (1222 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006350732.1| PREDICTED: uncharacterized protein LOC102582...    50   4e-08
gb|AEH25587.1| transposase [Solanum demissum]                          48   2e-07
ref|XP_006367273.1| PREDICTED: uncharacterized protein LOC102580...    59   3e-06

>ref|XP_006350732.1| PREDICTED: uncharacterized protein LOC102582528 [Solanum tuberosum]
          Length = 1068

 Score = 50.4 bits (119), Expect(2) = 4e-08
 Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 9/100 (9%)
 Frame = +2

Query: 950  LGEVGIDPGFEDIDMLKKNLTGKQLDDEPFYXXXXXXXXXXXXKGETD---------VDK 1102
            +G+ G D GF++    K ++ G+   DEP++               +D         + +
Sbjct: 181  IGDAGADLGFDETQTGKVSVEGRLGGDEPYFASSDDGSFEIDEDEFSDECVESARVNLPR 240

Query: 1103 SDILRAGKKDKRVSYDPTWKHVVWQLNMVFGDVKKFRKAI 1222
            +   R    ++++ +DPT K VVWQL MVF D+ +FR+A+
Sbjct: 241  TVKRRRRPNNQKIIHDPTAKKVVWQLGMVFADMNEFRRAV 280



 Score = 35.0 bits (79), Expect(2) = 4e-08
 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 13/59 (22%)
 Frame = +3

Query: 777 VKATVNSDAEDNENIDLS-------------DDENGYGSDVHEELNIVKADLKAYVKKK 914
           V   V SD  + E  D S             DD+  YGSDVHEE+  ++A+ +++ ++K
Sbjct: 109 VSGHVESDFSEEEGSDYSTEDSVESECGLVGDDDEDYGSDVHEEVRGLRAEKRSFQRRK 167


>gb|AEH25587.1| transposase [Solanum demissum]
          Length = 1124

 Score = 47.8 bits (112), Expect(2) = 2e-07
 Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 9/100 (9%)
 Frame = +2

Query: 950  LGEVGIDPGFEDIDMLKKNLTGKQLDDEPFYXXXXXXXXXXXXKGETDV----DKSDILR 1117
            +GE G D GF++    K ++ G+   DEP++               +D     ++  + R
Sbjct: 289  VGEAGADLGFDETQTGKISVEGRLGGDEPYFASSDDGSFEIDGDEFSDECVESERVHLPR 348

Query: 1118 AGKKDKRVS-----YDPTWKHVVWQLNMVFGDVKKFRKAI 1222
              K+ +R S     +DPT K VV QL MVF DV +FR+A+
Sbjct: 349  TVKRRRRPSNQKIIHDPTAKKVVGQLGMVFADVNEFRRAV 388



 Score = 35.0 bits (79), Expect(2) = 2e-07
 Identities = 14/39 (35%), Positives = 28/39 (71%)
 Frame = +3

Query: 798 DAEDNENIDLSDDENGYGSDVHEELNIVKADLKAYVKKK 914
           D+ ++E   + DD+  YGSDVHEE+  ++A+ +++ ++K
Sbjct: 237 DSVESECGLVGDDDEDYGSDVHEEVRELRAEKRSFQRRK 275


>ref|XP_006367273.1| PREDICTED: uncharacterized protein LOC102580735 [Solanum tuberosum]
          Length = 631

 Score = 59.3 bits (142), Expect = 3e-06
 Identities = 34/94 (36%), Positives = 47/94 (50%)
 Frame = +1

Query: 244 INLRFHIGGILVSEVGPLYIGGNKEYAFNVDMDHLSIPELNDYCRDFGVTNVEKMFIGSS 423
           I LR++ GG +V      Y+GG+      VD D +S  EL  Y +D G T     FI S 
Sbjct: 6   ITLRWYHGGKIVFGPSSDYVGGSVTEFLEVDTDRMSYFELKGYIKDLGYTTDCSFFIRSP 65

Query: 424 EFGNLVESVKDGDFLILANLLPNGGTMDIYVCHK 525
             G  VE   D     ++++  NG  MD+YVCH+
Sbjct: 66  IDGFFVEVKSDKVICDISSMFENGDRMDVYVCHE 99



 Score = 59.3 bits (142), Expect = 3e-06
 Identities = 34/94 (36%), Positives = 47/94 (50%)
 Frame = +1

Query: 244 INLRFHIGGILVSEVGPLYIGGNKEYAFNVDMDHLSIPELNDYCRDFGVTNVEKMFIGSS 423
           I LR++ GG +V      Y+GG+      VD D +S  EL  Y +D G T     FI S 
Sbjct: 351 ITLRWYHGGKIVFGPSSDYVGGSVTEFLEVDTDRMSYFELKGYIKDLGYTTDCSFFIRSP 410

Query: 424 EFGNLVESVKDGDFLILANLLPNGGTMDIYVCHK 525
             G  VE   D     ++++  NG  MD+YVCH+
Sbjct: 411 IDGFFVEVKSDKVICDISSMFENGDRMDVYVCHE 444


Top