BLASTX nr result

ID: Atropa21_contig00035411 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00035411
         (628 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006352672.1| PREDICTED: SKI family transcriptional corepr...   117   2e-24
ref|XP_004242421.1| PREDICTED: uncharacterized protein LOC101252...   114   3e-23

>ref|XP_006352672.1| PREDICTED: SKI family transcriptional corepressor 2-like [Solanum
           tuberosum]
          Length = 148

 Score =  117 bits (294), Expect = 2e-24
 Identities = 63/128 (49%), Positives = 74/128 (57%), Gaps = 6/128 (4%)
 Frame = +2

Query: 32  FQVLHNCPLHSYMLQRNNHVPAFPL------PQNPQHTAPALLPNNLNIQLSEPNENFTK 193
           FQ+LHNCP HSYMLQRN H P  PL      PQNP+   P+LLP++LN+Q+SEPN +F  
Sbjct: 25  FQILHNCPFHSYMLQRNKHGPTCPLFTPSPLPQNPEQITPSLLPDDLNMQISEPNVSFND 84

Query: 194 SRMMQDEGRXXXXXXXXXXXXXXXLIFVLTDEWREFFAKSEXXXXXXXXXXXXXXXXXXX 373
           S MMQ+EG                 IFVLTDEWR+FFAKSE                   
Sbjct: 85  SGMMQNEGENFEDEDEEEEP-----IFVLTDEWRDFFAKSEAKRRQAKKHAKKKGKGKIT 139

Query: 374 DGNTPALE 397
           +GNTPALE
Sbjct: 140 NGNTPALE 147


>ref|XP_004242421.1| PREDICTED: uncharacterized protein LOC101252895 [Solanum
           lycopersicum]
          Length = 154

 Score =  114 bits (284), Expect = 3e-23
 Identities = 62/130 (47%), Positives = 73/130 (56%), Gaps = 8/130 (6%)
 Frame = +2

Query: 32  FQVLHNCPLHSYMLQRNNHVPA------FPLPQNPQHTAPALLPNNLNIQLSEPNENFTK 193
           FQ++HNCPLHSYMLQRN HVP       FPLPQNP+   P+L P  +N+Q+SEPN +F  
Sbjct: 24  FQIVHNCPLHSYMLQRNKHVPPCPLFTPFPLPQNPEQITPSLQPEVMNMQISEPNVSFND 83

Query: 194 SRMMQDEGR--XXXXXXXXXXXXXXXLIFVLTDEWREFFAKSEXXXXXXXXXXXXXXXXX 367
           S MMQ+EG                   IFVLTDEWR+FFAKSE                 
Sbjct: 84  SGMMQNEGENFEYEGENFEYEDEEEEPIFVLTDEWRDFFAKSEAKRRQAKKHAKKKGKSK 143

Query: 368 XXDGNTPALE 397
             +GNT ALE
Sbjct: 144 ITNGNTAALE 153


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