BLASTX nr result
ID: Atropa21_contig00035388
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00035388
(515 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADU56211.1| gag-pol polyprotein [Solanum lycopersicum] 85 1e-43
ref|XP_004228792.1| PREDICTED: uncharacterized protein LOC101263... 79 2e-40
gb|ABI34389.1| Polyprotein, putative [Solanum tuberosum] 76 2e-39
gb|AAT66771.2| Putative polyprotein, identical [Solanum demissum] 77 4e-39
gb|AAT39954.1| Putative integrase, identical [Solanum demissum] 76 2e-37
gb|AAT38724.1| Putative retrotransposon protein, identical [Sola... 68 4e-34
gb|AAT38744.1| Putative gag-pol polyprotein, identical [Solanum ... 68 4e-34
gb|ABI34354.1| Retrotransposon gag protein [Solanum demissum] 67 1e-32
ref|XP_006356454.1| PREDICTED: uncharacterized protein LOC102599... 73 2e-32
ref|XP_004506381.1| PREDICTED: enzymatic polyprotein-like [Cicer... 68 3e-32
gb|EOY08659.1| DNA/RNA polymerases superfamily protein [Theobrom... 71 4e-32
ref|XP_006341875.1| PREDICTED: uncharacterized protein LOC102587... 90 2e-31
gb|EOY03078.1| Retrotransposon protein, putative [Theobroma cacao] 73 2e-31
gb|AAT39297.2| Gag-pol protein, putative [Solanum demissum] 66 4e-31
ref|XP_006364939.1| PREDICTED: uncharacterized protein LOC102581... 69 6e-31
gb|EOY26451.1| DNA/RNA polymerases superfamily protein [Theobrom... 71 6e-31
gb|EOY08667.1| Retrotransposon protein, Ty3-gypsy subclass, puta... 71 6e-31
gb|AAV31171.1| Putative polyprotein, identical [Solanum tuberosum] 63 1e-30
gb|EOY20275.1| DNA/RNA polymerases superfamily protein [Theobrom... 71 1e-30
gb|EOX99963.1| Uncharacterized protein TCM_009073 [Theobroma cacao] 71 1e-30
>gb|ADU56211.1| gag-pol polyprotein [Solanum lycopersicum]
Length = 367
Score = 85.1 bits (209), Expect(3) = 1e-43
Identities = 40/62 (64%), Positives = 50/62 (80%)
Frame = +1
Query: 118 LAEFAYNNNYHSSIEMILFEALYGKSCHSLVG*FYAFEDRPWGIDLLYDSLDKVRFI*ER 297
LAEF+YNN+YHSSI+M FEALYG+ C S +G F AFE RPWG DLL DS++KV+ I E+
Sbjct: 126 LAEFSYNNSYHSSIDMAPFEALYGRRCRSPIGWFDAFEVRPWGTDLLRDSIEKVKSIQEK 185
Query: 298 IL 303
+L
Sbjct: 186 LL 187
Score = 79.7 bits (195), Expect(3) = 1e-43
Identities = 43/68 (63%), Positives = 50/68 (73%)
Frame = +3
Query: 306 AQNW*KSYAYWKVRDLEFMVSE*VLLKVSPMKGLMIFERRGKLSLRYISHLKIVHRISEV 485
AQ+ K YA KVRDLEFM E VLLKVSPMK +M F +RGKL RYI +++ R+ EV
Sbjct: 189 AQSRQKEYADRKVRDLEFMEGEQVLLKVSPMKAVMRFGKRGKLIPRYIGPFEVLKRVGEV 248
Query: 486 AYELALPP 509
AYELALPP
Sbjct: 249 AYELALPP 256
Score = 58.2 bits (139), Expect(3) = 1e-43
Identities = 25/36 (69%), Positives = 29/36 (80%)
Frame = +2
Query: 11 FHPQMDGQSEWTIKVLVDMLRACVVDFDSHWD*FLP 118
FHPQ DGQSE TI+VL DM+ ACV++F HWD FLP
Sbjct: 90 FHPQTDGQSERTIQVLEDMICACVIEFGGHWDSFLP 125
>ref|XP_004228792.1| PREDICTED: uncharacterized protein LOC101263838, partial [Solanum
lycopersicum]
Length = 609
Score = 79.0 bits (193), Expect(3) = 2e-40
Identities = 43/68 (63%), Positives = 50/68 (73%)
Frame = +3
Query: 306 AQNW*KSYAYWKVRDLEFMVSE*VLLKVSPMKGLMIFERRGKLSLRYISHLKIVHRISEV 485
AQ+ K YA KVRDLEFM + VLLKVSPMKG+M F +R KLS RYI ++ R+ EV
Sbjct: 528 AQSRQKEYADRKVRDLEFMEGDQVLLKVSPMKGVMRFGKRCKLSPRYIGPFDVLKRVGEV 587
Query: 486 AYELALPP 509
AYELALPP
Sbjct: 588 AYELALPP 595
Score = 74.7 bits (182), Expect(3) = 2e-40
Identities = 35/62 (56%), Positives = 46/62 (74%)
Frame = +1
Query: 118 LAEFAYNNNYHSSIEMILFEALYGKSCHSLVG*FYAFEDRPWGIDLLYDSLDKVRFI*ER 297
L EF+YNN+YHS I+M F ALYG+ C S +G F A+E PWG D+L DSL+KV+ I E+
Sbjct: 465 LLEFSYNNSYHSGIDMAPFVALYGRRCGSPIGWFDAYEVTPWGTDILRDSLEKVKSIQEK 524
Query: 298 IL 303
+L
Sbjct: 525 LL 526
Score = 58.9 bits (141), Expect(3) = 2e-40
Identities = 26/36 (72%), Positives = 29/36 (80%)
Frame = +2
Query: 11 FHPQMDGQSEWTIKVLVDMLRACVVDFDSHWD*FLP 118
FHPQ DGQSE TI+VL DML ACV++F HWD FLP
Sbjct: 429 FHPQTDGQSERTIQVLEDMLCACVIEFGGHWDNFLP 464
>gb|ABI34389.1| Polyprotein, putative [Solanum tuberosum]
Length = 545
Score = 75.9 bits (185), Expect(3) = 2e-39
Identities = 38/61 (62%), Positives = 47/61 (77%)
Frame = +1
Query: 118 LAEFAYNNNYHSSIEMILFEALYGKSCHSLVG*FYAFEDRPWGIDLLYDSLDKVRFI*ER 297
LAEFAYNN+YHSSI+M FEALYG+ CHS VG F + E R G DLL ++LD+VR I +R
Sbjct: 152 LAEFAYNNSYHSSIQMAPFEALYGRRCHSPVGWFESTEPRLRGTDLLQEALDQVRVIQDR 211
Query: 298 I 300
+
Sbjct: 212 L 212
Score = 73.2 bits (178), Expect(3) = 2e-39
Identities = 40/70 (57%), Positives = 49/70 (70%)
Frame = +3
Query: 306 AQNW*KSYAYWKVRDLEFMVSE*VLLKVSPMKGLMIFERRGKLSLRYISHLKIVHRISEV 485
AQ+ +SYA + R L F V + V L+VSPMKG+M F RRGKLS RYI +I+ + EV
Sbjct: 215 AQSRHQSYADQRRRPLRFSVGDRVFLRVSPMKGVMRFGRRGKLSPRYIGPFEILRTVGEV 274
Query: 486 AYELALPPRF 515
AYELALPP F
Sbjct: 275 AYELALPPVF 284
Score = 59.7 bits (143), Expect(3) = 2e-39
Identities = 27/36 (75%), Positives = 29/36 (80%)
Frame = +2
Query: 11 FHPQMDGQSEWTIKVLVDMLRACVVDFDSHWD*FLP 118
FHPQ DGQSE TI+VL DMLRACV+DF WD FLP
Sbjct: 116 FHPQTDGQSERTIQVLEDMLRACVMDFGGQWDQFLP 151
>gb|AAT66771.2| Putative polyprotein, identical [Solanum demissum]
Length = 1771
Score = 76.6 bits (187), Expect(3) = 4e-39
Identities = 38/61 (62%), Positives = 47/61 (77%)
Frame = +1
Query: 118 LAEFAYNNNYHSSIEMILFEALYGKSCHSLVG*FYAFEDRPWGIDLLYDSLDKVRFI*ER 297
LAEFAYNN+YHSSI+M FEALYG+ C S VG F + E RP G DLL ++LD+VR I +R
Sbjct: 1546 LAEFAYNNSYHSSIQMAPFEALYGRRCRSPVGWFESTEPRPRGTDLLQEALDQVRVIQDR 1605
Query: 298 I 300
+
Sbjct: 1606 L 1606
Score = 73.2 bits (178), Expect(3) = 4e-39
Identities = 40/70 (57%), Positives = 49/70 (70%)
Frame = +3
Query: 306 AQNW*KSYAYWKVRDLEFMVSE*VLLKVSPMKGLMIFERRGKLSLRYISHLKIVHRISEV 485
AQ+ +SYA + R L F V + V L+VSPMKG+M F RRGKLS RYI +I+ + EV
Sbjct: 1609 AQSRHQSYADQRRRPLRFSVGDRVFLRVSPMKGVMRFGRRGKLSPRYIGPFEILRTVGEV 1668
Query: 486 AYELALPPRF 515
AYELALPP F
Sbjct: 1669 AYELALPPVF 1678
Score = 58.2 bits (139), Expect(3) = 4e-39
Identities = 26/36 (72%), Positives = 29/36 (80%)
Frame = +2
Query: 11 FHPQMDGQSEWTIKVLVDMLRACVVDFDSHWD*FLP 118
FHPQ DGQSE TI+VL DMLRACV+DF W+ FLP
Sbjct: 1510 FHPQTDGQSERTIQVLEDMLRACVMDFGGQWEQFLP 1545
>gb|AAT39954.1| Putative integrase, identical [Solanum demissum]
Length = 1609
Score = 75.9 bits (185), Expect(3) = 2e-37
Identities = 38/61 (62%), Positives = 47/61 (77%)
Frame = +1
Query: 118 LAEFAYNNNYHSSIEMILFEALYGKSCHSLVG*FYAFEDRPWGIDLLYDSLDKVRFI*ER 297
LAEFAYNNNY+SSI+M FEALYG+ C S VG F + E RP G DLL ++LD+VR I +R
Sbjct: 1243 LAEFAYNNNYYSSIQMAPFEALYGRRCRSPVGWFESTEARPRGTDLLQEALDQVRVIQDR 1302
Query: 298 I 300
+
Sbjct: 1303 L 1303
Score = 68.2 bits (165), Expect(3) = 2e-37
Identities = 37/70 (52%), Positives = 47/70 (67%)
Frame = +3
Query: 306 AQNW*KSYAYWKVRDLEFMVSE*VLLKVSPMKGLMIFERRGKLSLRYISHLKIVHRISEV 485
AQ+ ++YA + R L F V + V +VSPMKG+M F RR KLS RYI +I+ + EV
Sbjct: 1306 AQSRHQNYADRRRRPLRFSVGDRVFFRVSPMKGVMRFGRRDKLSPRYIGPFEILRTVGEV 1365
Query: 486 AYELALPPRF 515
AYELALPP F
Sbjct: 1366 AYELALPPAF 1375
Score = 58.2 bits (139), Expect(3) = 2e-37
Identities = 26/36 (72%), Positives = 29/36 (80%)
Frame = +2
Query: 11 FHPQMDGQSEWTIKVLVDMLRACVVDFDSHWD*FLP 118
FHPQ DGQSE TI+VL DML+ACV+DF WD FLP
Sbjct: 1207 FHPQTDGQSERTIQVLEDMLQACVMDFGGQWDQFLP 1242
>gb|AAT38724.1| Putative retrotransposon protein, identical [Solanum demissum]
Length = 1602
Score = 68.2 bits (165), Expect(3) = 4e-34
Identities = 38/67 (56%), Positives = 46/67 (68%)
Frame = +3
Query: 306 AQNW*KSYAYWKVRDLEFMVSE*VLLKVSPMKGLMIFERRGKLSLRYISHLKIVHRISEV 485
AQ+ KSY + R LEF V + V LKVSPMKG+M F ++GKLS RYI +IV R+ V
Sbjct: 1439 AQSRQKSYTDVRRRALEFEVDDWVYLKVSPMKGVMRFGKKGKLSPRYIGPYRIVQRVGSV 1498
Query: 486 AYELALP 506
AYEL LP
Sbjct: 1499 AYELELP 1505
Score = 65.9 bits (159), Expect(3) = 4e-34
Identities = 32/61 (52%), Positives = 44/61 (72%)
Frame = +1
Query: 118 LAEFAYNNNYHSSIEMILFEALYGKSCHSLVG*FYAFEDRPWGIDLLYDSLDKVRFI*ER 297
L EFAYNN+YHSSI+M +EALYG+ C S +G F E R G DL++ +++KV+ I ER
Sbjct: 1376 LIEFAYNNSYHSSIQMAPYEALYGRRCRSPIGWFEVGEARLIGPDLVHQAMEKVKVIQER 1435
Query: 298 I 300
+
Sbjct: 1436 L 1436
Score = 57.0 bits (136), Expect(3) = 4e-34
Identities = 25/36 (69%), Positives = 29/36 (80%)
Frame = +2
Query: 11 FHPQMDGQSEWTIKVLVDMLRACVVDFDSHWD*FLP 118
FHPQ DGQ+E TI+ L DMLRACV+DF S+WD LP
Sbjct: 1340 FHPQTDGQAERTIQTLEDMLRACVIDFKSNWDDHLP 1375
>gb|AAT38744.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1515
Score = 68.2 bits (165), Expect(3) = 4e-34
Identities = 38/67 (56%), Positives = 46/67 (68%)
Frame = +3
Query: 306 AQNW*KSYAYWKVRDLEFMVSE*VLLKVSPMKGLMIFERRGKLSLRYISHLKIVHRISEV 485
AQ+ KSY + R LEF V + V LKVSPMKG+M F ++GKLS RYI +IV R+ V
Sbjct: 1433 AQSRQKSYTDVRRRALEFEVDDWVYLKVSPMKGVMRFGKKGKLSPRYIGPYRIVQRVGSV 1492
Query: 486 AYELALP 506
AYEL LP
Sbjct: 1493 AYELELP 1499
Score = 65.9 bits (159), Expect(3) = 4e-34
Identities = 32/61 (52%), Positives = 44/61 (72%)
Frame = +1
Query: 118 LAEFAYNNNYHSSIEMILFEALYGKSCHSLVG*FYAFEDRPWGIDLLYDSLDKVRFI*ER 297
L EFAYNN+YHSSI+M +EALYG+ C S +G F E R G DL++ +++KV+ I ER
Sbjct: 1370 LIEFAYNNSYHSSIQMAPYEALYGRRCRSPIGWFEVGEARLIGPDLVHQAMEKVKVIQER 1429
Query: 298 I 300
+
Sbjct: 1430 L 1430
Score = 57.0 bits (136), Expect(3) = 4e-34
Identities = 25/36 (69%), Positives = 29/36 (80%)
Frame = +2
Query: 11 FHPQMDGQSEWTIKVLVDMLRACVVDFDSHWD*FLP 118
FHPQ DGQ+E TI+ L DMLRACV+DF S+WD LP
Sbjct: 1334 FHPQTDGQAERTIQTLEDMLRACVIDFKSNWDDHLP 1369
>gb|ABI34354.1| Retrotransposon gag protein [Solanum demissum]
Length = 4543
Score = 66.6 bits (161), Expect(3) = 1e-32
Identities = 38/67 (56%), Positives = 45/67 (67%)
Frame = +3
Query: 306 AQNW*KSYAYWKVRDLEFMVSE*VLLKVSPMKGLMIFERRGKLSLRYISHLKIVHRISEV 485
AQ+ KSY + R LEF V + V LKVSPMKG+M F ++GKLS RYI +I RI V
Sbjct: 1188 AQSRQKSYTDVRRRALEFEVDDWVYLKVSPMKGVMRFGKKGKLSPRYIGPYRIAKRIGNV 1247
Query: 486 AYELALP 506
AYEL LP
Sbjct: 1248 AYELELP 1254
Score = 66.6 bits (161), Expect(3) = 1e-32
Identities = 38/67 (56%), Positives = 45/67 (67%)
Frame = +3
Query: 306 AQNW*KSYAYWKVRDLEFMVSE*VLLKVSPMKGLMIFERRGKLSLRYISHLKIVHRISEV 485
AQ+ KSY + R LEF V + V LKVSPMKG+M F ++GKLS RYI +I RI V
Sbjct: 2698 AQSRQKSYTDVRRRALEFEVDDWVYLKVSPMKGVMRFGKKGKLSPRYIGPYRIAKRIGNV 2757
Query: 486 AYELALP 506
AYEL LP
Sbjct: 2758 AYELELP 2764
Score = 66.6 bits (161), Expect(3) = 1e-32
Identities = 38/67 (56%), Positives = 45/67 (67%)
Frame = +3
Query: 306 AQNW*KSYAYWKVRDLEFMVSE*VLLKVSPMKGLMIFERRGKLSLRYISHLKIVHRISEV 485
AQ+ KSY + R LEF V + V LKVSPMKG+M F ++GKLS RYI +I RI V
Sbjct: 4208 AQSRQKSYTDVRRRALEFEVDDWVYLKVSPMKGVMRFGKKGKLSPRYIGPYRIAKRIGNV 4267
Query: 486 AYELALP 506
AYEL LP
Sbjct: 4268 AYELELP 4274
Score = 62.4 bits (150), Expect(3) = 1e-32
Identities = 30/61 (49%), Positives = 43/61 (70%)
Frame = +1
Query: 118 LAEFAYNNNYHSSIEMILFEALYGKSCHSLVG*FYAFEDRPWGIDLLYDSLDKVRFI*ER 297
L EFAYNN+YH SI+M +EALYG+ C S +G F E + G DL++ +++KV+ I ER
Sbjct: 1125 LIEFAYNNSYHPSIQMAPYEALYGRRCRSPIGWFEVGEAQLIGPDLVHQAMEKVKVIKER 1184
Query: 298 I 300
+
Sbjct: 1185 L 1185
Score = 62.4 bits (150), Expect(3) = 1e-32
Identities = 30/61 (49%), Positives = 43/61 (70%)
Frame = +1
Query: 118 LAEFAYNNNYHSSIEMILFEALYGKSCHSLVG*FYAFEDRPWGIDLLYDSLDKVRFI*ER 297
L EFAYNN+YH SI+M +EALYG+ C S +G F E + G DL++ +++KV+ I ER
Sbjct: 2635 LIEFAYNNSYHPSIQMAPYEALYGRRCRSPIGWFEVGEAQLIGPDLVHQAMEKVKVIKER 2694
Query: 298 I 300
+
Sbjct: 2695 L 2695
Score = 62.4 bits (150), Expect(3) = 1e-32
Identities = 30/61 (49%), Positives = 43/61 (70%)
Frame = +1
Query: 118 LAEFAYNNNYHSSIEMILFEALYGKSCHSLVG*FYAFEDRPWGIDLLYDSLDKVRFI*ER 297
L EFAYNN+YH SI+M +EALYG+ C S +G F E + G DL++ +++KV+ I ER
Sbjct: 4145 LIEFAYNNSYHPSIQMAPYEALYGRRCRSPIGWFEVGEAQLIGPDLVHQAMEKVKVIKER 4204
Query: 298 I 300
+
Sbjct: 4205 L 4205
Score = 57.0 bits (136), Expect(3) = 1e-32
Identities = 24/36 (66%), Positives = 29/36 (80%)
Frame = +2
Query: 11 FHPQMDGQSEWTIKVLVDMLRACVVDFDSHWD*FLP 118
FHPQ DGQ+E TI++L DMLRACV+DF +WD LP
Sbjct: 1089 FHPQTDGQAEHTIQILEDMLRACVIDFKGNWDDHLP 1124
Score = 57.0 bits (136), Expect(3) = 1e-32
Identities = 24/36 (66%), Positives = 29/36 (80%)
Frame = +2
Query: 11 FHPQMDGQSEWTIKVLVDMLRACVVDFDSHWD*FLP 118
FHPQ DGQ+E TI++L DMLRACV+DF +WD LP
Sbjct: 2599 FHPQTDGQAEHTIQILEDMLRACVIDFKGNWDDHLP 2634
Score = 57.0 bits (136), Expect(3) = 1e-32
Identities = 24/36 (66%), Positives = 29/36 (80%)
Frame = +2
Query: 11 FHPQMDGQSEWTIKVLVDMLRACVVDFDSHWD*FLP 118
FHPQ DGQ+E TI++L DMLRACV+DF +WD LP
Sbjct: 4109 FHPQTDGQAEHTIQILEDMLRACVIDFKGNWDDHLP 4144
>ref|XP_006356454.1| PREDICTED: uncharacterized protein LOC102599406 [Solanum tuberosum]
Length = 859
Score = 72.8 bits (177), Expect(3) = 2e-32
Identities = 36/61 (59%), Positives = 46/61 (75%)
Frame = +1
Query: 118 LAEFAYNNNYHSSIEMILFEALYGKSCHSLVG*FYAFEDRPWGIDLLYDSLDKVRFI*ER 297
LAEFAYNN+YHSSI+M FEALYG+ C S VG F + + RP G DL+ ++LD VR I +R
Sbjct: 602 LAEFAYNNSYHSSIQMAPFEALYGRRCRSPVGWFESTKRRPRGTDLMREALDHVRVIQDR 661
Query: 298 I 300
+
Sbjct: 662 L 662
Score = 58.5 bits (140), Expect(3) = 2e-32
Identities = 27/36 (75%), Positives = 28/36 (77%)
Frame = +2
Query: 11 FHPQMDGQSEWTIKVLVDMLRACVVDFDSHWD*FLP 118
FHPQ DGQSE TIKVL DMLRACV+DF WD LP
Sbjct: 566 FHPQTDGQSERTIKVLEDMLRACVMDFGGQWDQHLP 601
Score = 54.3 bits (129), Expect(3) = 2e-32
Identities = 30/60 (50%), Positives = 40/60 (66%)
Frame = +3
Query: 306 AQNW*KSYAYWKVRDLEFMVSE*VLLKVSPMKGLMIFERRGKLSLRYISHLKIVHRISEV 485
AQ+ +SYA + R L+F V V L+VSPMKG++ F RRGKLS RYI +I+ + EV
Sbjct: 665 AQSRHQSYANRRRRPLKFAVGNRVFLRVSPMKGVIRFGRRGKLSARYIGPFEILRTVREV 724
>ref|XP_004506381.1| PREDICTED: enzymatic polyprotein-like [Cicer arietinum]
Length = 690
Score = 67.8 bits (164), Expect(3) = 3e-32
Identities = 35/68 (51%), Positives = 48/68 (70%)
Frame = +3
Query: 306 AQNW*KSYAYWKVRDLEFMVSE*VLLKVSPMKGLMIFERRGKLSLRYISHLKIVHRISEV 485
AQ+ KSY+ + R LEF V E V L+VSPMKG++ F ++GKLS R+I +++ R+ V
Sbjct: 534 AQSRQKSYSDKRRRPLEFSVGEHVFLRVSPMKGVLRFGKKGKLSPRFIGPFEVLERVGPV 593
Query: 486 AYELALPP 509
AY LALPP
Sbjct: 594 AYRLALPP 601
Score = 62.0 bits (149), Expect(3) = 3e-32
Identities = 30/62 (48%), Positives = 43/62 (69%)
Frame = +1
Query: 118 LAEFAYNNNYHSSIEMILFEALYGKSCHSLVG*FYAFEDRPWGIDLLYDSLDKVRFI*ER 297
L EFAYNN Y SSI+M FEALYG+ C S +G F E + G +L+ D+++KV+ I +R
Sbjct: 471 LMEFAYNNTYQSSIQMAPFEALYGRRCRSPIGWFEVREAKLVGPELIQDAIEKVKLIRDR 530
Query: 298 IL 303
++
Sbjct: 531 LV 532
Score = 54.7 bits (130), Expect(3) = 3e-32
Identities = 24/36 (66%), Positives = 28/36 (77%)
Frame = +2
Query: 11 FHPQMDGQSEWTIKVLVDMLRACVVDFDSHWD*FLP 118
FHPQ+DGQSE TI++L DMLRACV+D WD LP
Sbjct: 435 FHPQIDGQSERTIQILEDMLRACVLDLGGSWDQHLP 470
>gb|EOY08659.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 937
Score = 70.9 bits (172), Expect(3) = 4e-32
Identities = 38/68 (55%), Positives = 48/68 (70%)
Frame = +3
Query: 306 AQNW*KSYAYWKVRDLEFMVSE*VLLKVSPMKGLMIFERRGKLSLRYISHLKIVHRISEV 485
AQ+ KSYA + RDLEF V + V LKVSP KG+M F ++GKLS RYI +I+ ++ V
Sbjct: 751 AQSRQKSYADNRRRDLEFQVGDHVFLKVSPTKGVMRFGKKGKLSPRYIGPFEILEKVGVV 810
Query: 486 AYELALPP 509
AY LALPP
Sbjct: 811 AYRLALPP 818
Score = 58.5 bits (140), Expect(3) = 4e-32
Identities = 24/36 (66%), Positives = 28/36 (77%)
Frame = +2
Query: 11 FHPQMDGQSEWTIKVLVDMLRACVVDFDSHWD*FLP 118
FHPQ DGQSEWTI+ L DMLRACV+D W+ +LP
Sbjct: 652 FHPQTDGQSEWTIQTLEDMLRACVIDLGVRWEQYLP 687
Score = 54.7 bits (130), Expect(3) = 4e-32
Identities = 26/62 (41%), Positives = 40/62 (64%)
Frame = +1
Query: 118 LAEFAYNNNYHSSIEMILFEALYGKSCHSLVG*FYAFEDRPWGIDLLYDSLDKVRFI*ER 297
L EFAYNN++ +SI+M FEALYG+ C S +G E + G + + D+ +K+ I +R
Sbjct: 688 LVEFAYNNSFQTSIQMAPFEALYGRRCRSPIGWLEVGERKLLGPEFVQDATEKIHMIRQR 747
Query: 298 IL 303
+L
Sbjct: 748 ML 749
>ref|XP_006341875.1| PREDICTED: uncharacterized protein LOC102587225 [Solanum tuberosum]
Length = 819
Score = 90.1 bits (222), Expect(3) = 2e-31
Identities = 49/69 (71%), Positives = 55/69 (79%)
Frame = +3
Query: 306 AQNW*KSYAYWKVRDLEFMVSE*VLLKVSPMKGLMIFERRGKLSLRYISHLKIVHRISEV 485
AQ+ KSYA KVRDLEFMV E VLLKVSPMKG+M F ++GKLS RYI +IV RI EV
Sbjct: 678 AQSRKKSYADRKVRDLEFMVGERVLLKVSPMKGVMRFGKKGKLSPRYIGPFEIVERIGEV 737
Query: 486 AYELALPPR 512
AY+LALPPR
Sbjct: 738 AYQLALPPR 746
Score = 58.5 bits (140), Expect(3) = 2e-31
Identities = 26/36 (72%), Positives = 28/36 (77%)
Frame = +2
Query: 11 FHPQMDGQSEWTIKVLVDMLRACVVDFDSHWD*FLP 118
FHPQ DGQS I+VL DMLRACV+DF HWD FLP
Sbjct: 615 FHPQTDGQSGRIIQVLEDMLRACVIDFGGHWDQFLP 650
Score = 33.5 bits (75), Expect(3) = 2e-31
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +1
Query: 235 RPWGIDLLYDSLDKVRFI*ERILKLRIGKR 324
RPW DLL +SLDKV+ I +R+L + K+
Sbjct: 654 RPWDTDLLRESLDKVKLIQDRLLMAQSRKK 683
>gb|EOY03078.1| Retrotransposon protein, putative [Theobroma cacao]
Length = 1263
Score = 73.2 bits (178), Expect(3) = 2e-31
Identities = 39/68 (57%), Positives = 48/68 (70%)
Frame = +3
Query: 306 AQNW*KSYAYWKVRDLEFMVSE*VLLKVSPMKGLMIFERRGKLSLRYISHLKIVHRISEV 485
AQ+ KSY + RDLEF V + V LKVSP KG+M F ++GKLS RYI +I+ R+ EV
Sbjct: 1105 AQSRQKSYVDNRRRDLEFQVGDHVFLKVSPTKGVMRFGKKGKLSPRYIGPFEILERVGEV 1164
Query: 486 AYELALPP 509
AY LALPP
Sbjct: 1165 AYRLALPP 1172
Score = 55.1 bits (131), Expect(3) = 2e-31
Identities = 27/62 (43%), Positives = 40/62 (64%)
Frame = +1
Query: 118 LAEFAYNNNYHSSIEMILFEALYGKSCHSLVG*FYAFEDRPWGIDLLYDSLDKVRFI*ER 297
L EFAYNN++ +SI+M FEALYG+ C S +G E + G L+ D+ +K+ I +R
Sbjct: 1042 LVEFAYNNSFQTSIQMAPFEALYGRRCRSPIGWLEVGERKLLGPKLVQDATEKIHMIRQR 1101
Query: 298 IL 303
+L
Sbjct: 1102 ML 1103
Score = 53.5 bits (127), Expect(3) = 2e-31
Identities = 23/36 (63%), Positives = 27/36 (75%)
Frame = +2
Query: 11 FHPQMDGQSEWTIKVLVDMLRACVVDFDSHWD*FLP 118
FHPQ DGQSE TI+ L DMLRACV+D W+ +LP
Sbjct: 1006 FHPQTDGQSEQTIQTLEDMLRACVIDLGVRWEQYLP 1041
>gb|AAT39297.2| Gag-pol protein, putative [Solanum demissum]
Length = 1554
Score = 65.9 bits (159), Expect(3) = 4e-31
Identities = 37/67 (55%), Positives = 45/67 (67%)
Frame = +3
Query: 306 AQNW*KSYAYWKVRDLEFMVSE*VLLKVSPMKGLMIFERRGKLSLRYISHLKIVHRISEV 485
AQ+ KSY + R LEF V + V LKVSPMKG+M F ++GKLS +YI +I RI V
Sbjct: 1439 AQSRQKSYIDVRTRALEFEVDDWVYLKVSPMKGVMRFGKKGKLSPQYIGPYRIAKRIGNV 1498
Query: 486 AYELALP 506
AYEL LP
Sbjct: 1499 AYELELP 1505
Score = 62.4 bits (150), Expect(3) = 4e-31
Identities = 31/61 (50%), Positives = 43/61 (70%)
Frame = +1
Query: 118 LAEFAYNNNYHSSIEMILFEALYGKSCHSLVG*FYAFEDRPWGIDLLYDSLDKVRFI*ER 297
L EFAYNN+YHSSI M +EALYG+ C S +G F E + G DL++ +++KV+ I ER
Sbjct: 1376 LIEFAYNNSYHSSIHMAPYEALYGRRCISPIGWFEVGEAQLIGPDLVHQAMEKVKVIQER 1435
Query: 298 I 300
+
Sbjct: 1436 L 1436
Score = 52.4 bits (124), Expect(3) = 4e-31
Identities = 23/36 (63%), Positives = 27/36 (75%)
Frame = +2
Query: 11 FHPQMDGQSEWTIKVLVDMLRACVVDFDSHWD*FLP 118
F+PQ DGQ+E TI L DMLRACV+DF +WD LP
Sbjct: 1340 FYPQTDGQAERTIHTLEDMLRACVIDFKGNWDDHLP 1375
>ref|XP_006364939.1| PREDICTED: uncharacterized protein LOC102581051 [Solanum tuberosum]
Length = 1946
Score = 68.6 bits (166), Expect(3) = 6e-31
Identities = 37/67 (55%), Positives = 48/67 (71%)
Frame = +3
Query: 306 AQNW*KSYAYWKVRDLEFMVSE*VLLKVSPMKGLMIFERRGKLSLRYISHLKIVHRISEV 485
AQ+ KSYA + R LEF V + V LKVSPMKG++ F ++GKLS RY+ K++ RI +V
Sbjct: 1784 AQSRRKSYADVRRRALEFRVGDWVYLKVSPMKGVVRFGKKGKLSPRYVGPYKVMRRIGKV 1843
Query: 486 AYELALP 506
AYEL LP
Sbjct: 1844 AYELELP 1850
Score = 63.2 bits (152), Expect(3) = 6e-31
Identities = 33/61 (54%), Positives = 42/61 (68%)
Frame = +1
Query: 118 LAEFAYNNNYHSSIEMILFEALYGKSCHSLVG*FYAFEDRPWGIDLLYDSLDKVRFI*ER 297
L EF+YNN+YHSSI M FEALYG+ C S VG F E G DL+ ++L++VR I ER
Sbjct: 1721 LIEFSYNNSYHSSIGMAPFEALYGRRCRSSVGLFEVGEVALLGPDLVMEALEEVRMIRER 1780
Query: 298 I 300
+
Sbjct: 1781 L 1781
Score = 48.5 bits (114), Expect(3) = 6e-31
Identities = 21/36 (58%), Positives = 26/36 (72%)
Frame = +2
Query: 11 FHPQMDGQSEWTIKVLVDMLRACVVDFDSHWD*FLP 118
FHPQ DGQ+E TI+ L DMLRACV++ W+ LP
Sbjct: 1685 FHPQTDGQAERTIQTLEDMLRACVLELKGSWEDHLP 1720
>gb|EOY26451.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 679
Score = 70.9 bits (172), Expect(3) = 6e-31
Identities = 38/68 (55%), Positives = 47/68 (69%)
Frame = +3
Query: 306 AQNW*KSYAYWKVRDLEFMVSE*VLLKVSPMKGLMIFERRGKLSLRYISHLKIVHRISEV 485
AQ+ KSYA + RDLEF V + V LK SP KG+M F ++GKLS RYI KI+ ++ V
Sbjct: 521 AQSRQKSYADNRRRDLEFQVGDHVFLKFSPTKGVMRFGKKGKLSPRYIGPFKILEKVGAV 580
Query: 486 AYELALPP 509
AY LALPP
Sbjct: 581 AYRLALPP 588
Score = 56.2 bits (134), Expect(3) = 6e-31
Identities = 27/62 (43%), Positives = 41/62 (66%)
Frame = +1
Query: 118 LAEFAYNNNYHSSIEMILFEALYGKSCHSLVG*FYAFEDRPWGIDLLYDSLDKVRFI*ER 297
L EFAYNN++ +SI+M FEALYG+ C S +G E + G +L+ D+ +K+ I +R
Sbjct: 458 LVEFAYNNSFQTSIQMAPFEALYGRRCRSPIGWLEVGERKLLGPELVQDATEKIHMIRQR 517
Query: 298 IL 303
+L
Sbjct: 518 ML 519
Score = 53.1 bits (126), Expect(3) = 6e-31
Identities = 23/36 (63%), Positives = 27/36 (75%)
Frame = +2
Query: 11 FHPQMDGQSEWTIKVLVDMLRACVVDFDSHWD*FLP 118
FHPQ DGQSE TI+ L DMLRACV+D W+ +LP
Sbjct: 422 FHPQTDGQSERTIQTLEDMLRACVIDLGVRWEQYLP 457
>gb|EOY08667.1| Retrotransposon protein, Ty3-gypsy subclass, putative [Theobroma
cacao]
Length = 521
Score = 70.9 bits (172), Expect(3) = 6e-31
Identities = 38/68 (55%), Positives = 48/68 (70%)
Frame = +3
Query: 306 AQNW*KSYAYWKVRDLEFMVSE*VLLKVSPMKGLMIFERRGKLSLRYISHLKIVHRISEV 485
AQ+ KSYA + RDLEF V + V LKVSP KG+M F ++GKLS RYI +I+ ++ V
Sbjct: 363 AQSRHKSYADNRRRDLEFQVGDHVFLKVSPTKGVMRFGKKGKLSPRYIGPFEILDKVGTV 422
Query: 486 AYELALPP 509
AY LALPP
Sbjct: 423 AYRLALPP 430
Score = 56.2 bits (134), Expect(3) = 6e-31
Identities = 27/62 (43%), Positives = 41/62 (66%)
Frame = +1
Query: 118 LAEFAYNNNYHSSIEMILFEALYGKSCHSLVG*FYAFEDRPWGIDLLYDSLDKVRFI*ER 297
L EFAYNN++ +SI+M FEALYG+ C S +G E + G +L+ D+ +K+ I +R
Sbjct: 300 LVEFAYNNSFQTSIQMAPFEALYGRRCRSPIGWLEVGERKLLGPELVQDATEKIHMIRQR 359
Query: 298 IL 303
+L
Sbjct: 360 ML 361
Score = 53.1 bits (126), Expect(3) = 6e-31
Identities = 23/36 (63%), Positives = 27/36 (75%)
Frame = +2
Query: 11 FHPQMDGQSEWTIKVLVDMLRACVVDFDSHWD*FLP 118
FHPQ DGQSE TI+ L DMLRACV+D W+ +LP
Sbjct: 264 FHPQTDGQSERTIQTLEDMLRACVIDLGVRWEQYLP 299
>gb|AAV31171.1| Putative polyprotein, identical [Solanum tuberosum]
Length = 1487
Score = 62.8 bits (151), Expect(3) = 1e-30
Identities = 36/67 (53%), Positives = 43/67 (64%)
Frame = +3
Query: 306 AQNW*KSYAYWKVRDLEFMVSE*VLLKVSPMKGLMIFERRGKLSLRYISHLKIVHRISEV 485
AQ+ KSY + R LEF V V LKVSPMKG+M ++GKLS RYI +I RI +
Sbjct: 1320 AQSRQKSYTDVRRRALEFEVDNWVYLKVSPMKGVMRVGKKGKLSPRYIGPYRIAKRIGNI 1379
Query: 486 AYELALP 506
AYEL LP
Sbjct: 1380 AYELELP 1386
Score = 61.2 bits (147), Expect(3) = 1e-30
Identities = 30/61 (49%), Positives = 43/61 (70%)
Frame = +1
Query: 118 LAEFAYNNNYHSSIEMILFEALYGKSCHSLVG*FYAFEDRPWGIDLLYDSLDKVRFI*ER 297
L EFAYNN+YHSSI+M +EALYG+ C S +G F E G +L++ +++KV+ I ER
Sbjct: 1257 LIEFAYNNSYHSSIQMAPYEALYGRRCRSPIGWFEVGEAGLIGPNLVHQAMEKVKVIQER 1316
Query: 298 I 300
+
Sbjct: 1317 L 1317
Score = 55.5 bits (132), Expect(3) = 1e-30
Identities = 24/36 (66%), Positives = 28/36 (77%)
Frame = +2
Query: 11 FHPQMDGQSEWTIKVLVDMLRACVVDFDSHWD*FLP 118
FHPQ DGQ+E TI+ L DMLRACV+DF +WD LP
Sbjct: 1221 FHPQTDGQAERTIQTLEDMLRACVIDFKGNWDDHLP 1256
>gb|EOY20275.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 562
Score = 71.2 bits (173), Expect(3) = 1e-30
Identities = 38/68 (55%), Positives = 48/68 (70%)
Frame = +3
Query: 306 AQNW*KSYAYWKVRDLEFMVSE*VLLKVSPMKGLMIFERRGKLSLRYISHLKIVHRISEV 485
AQ+ KSYA + RDLEF V + V LKVSP KG+M F ++GKLS RYI +I+ ++ V
Sbjct: 470 AQSRQKSYADNRRRDLEFQVGDHVFLKVSPTKGVMRFGKKGKLSPRYIGPFEILEKVGAV 529
Query: 486 AYELALPP 509
AY LALPP
Sbjct: 530 AYRLALPP 537
Score = 55.1 bits (131), Expect(3) = 1e-30
Identities = 26/62 (41%), Positives = 41/62 (66%)
Frame = +1
Query: 118 LAEFAYNNNYHSSIEMILFEALYGKSCHSLVG*FYAFEDRPWGIDLLYDSLDKVRFI*ER 297
L EFAYNN++ +SI+M FEALYG+ C S +G E + G +L+ D+ +K+ I ++
Sbjct: 407 LVEFAYNNSFQTSIQMAPFEALYGRRCRSPIGWLEVGERKLLGPELVQDATEKIHMISQK 466
Query: 298 IL 303
+L
Sbjct: 467 ML 468
Score = 53.1 bits (126), Expect(3) = 1e-30
Identities = 23/36 (63%), Positives = 27/36 (75%)
Frame = +2
Query: 11 FHPQMDGQSEWTIKVLVDMLRACVVDFDSHWD*FLP 118
FHPQ DGQSE TI+ L DMLRACV+D W+ +LP
Sbjct: 371 FHPQTDGQSERTIQTLEDMLRACVIDLGVRWEQYLP 406
>gb|EOX99963.1| Uncharacterized protein TCM_009073 [Theobroma cacao]
Length = 421
Score = 71.2 bits (173), Expect(3) = 1e-30
Identities = 38/68 (55%), Positives = 48/68 (70%)
Frame = +3
Query: 306 AQNW*KSYAYWKVRDLEFMVSE*VLLKVSPMKGLMIFERRGKLSLRYISHLKIVHRISEV 485
AQ+ KSYA + RDLEF V + V LKVSP KG+M F ++GKLS RYI +I+ ++ V
Sbjct: 249 AQSRQKSYADNRRRDLEFQVGDHVFLKVSPTKGVMRFGKKGKLSPRYIGPFEILEKVGAV 308
Query: 486 AYELALPP 509
AY LALPP
Sbjct: 309 AYRLALPP 316
Score = 54.7 bits (130), Expect(3) = 1e-30
Identities = 26/62 (41%), Positives = 41/62 (66%)
Frame = +1
Query: 118 LAEFAYNNNYHSSIEMILFEALYGKSCHSLVG*FYAFEDRPWGIDLLYDSLDKVRFI*ER 297
L EFAYNN++ +SI+M F+ALYG+ C S +G E + G +L+ D+ +K+ I +R
Sbjct: 186 LVEFAYNNSFQTSIQMAPFKALYGRRCRSPIGWLEVGERKLLGPELVQDATEKIHIIRQR 245
Query: 298 IL 303
+L
Sbjct: 246 ML 247
Score = 53.1 bits (126), Expect(3) = 1e-30
Identities = 23/36 (63%), Positives = 27/36 (75%)
Frame = +2
Query: 11 FHPQMDGQSEWTIKVLVDMLRACVVDFDSHWD*FLP 118
FHPQ DGQSE TI+ L DMLRACV+D W+ +LP
Sbjct: 150 FHPQTDGQSERTIQTLEDMLRACVIDLGVRWEQYLP 185