BLASTX nr result
ID: Atropa21_contig00035349
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00035349
(521 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006340804.1| PREDICTED: ribonuclease E/G-like protein, ch... 279 2e-73
ref|XP_006340803.1| PREDICTED: ribonuclease E/G-like protein, ch... 279 2e-73
ref|NP_001234480.1| ribonuclease E [Solanum lycopersicum] gi|166... 274 1e-71
emb|CBI28473.3| unnamed protein product [Vitis vinifera] 65 7e-09
ref|XP_002267175.1| PREDICTED: uncharacterized protein LOC100256... 65 7e-09
gb|EOX93566.1| RNAse E/G-like [Theobroma cacao] 62 6e-08
ref|XP_002524601.1| hypothetical protein RCOM_1213430 [Ricinus c... 60 3e-07
ref|XP_006469421.1| PREDICTED: ribonuclease E/G-like protein, ch... 58 1e-06
ref|XP_006469420.1| PREDICTED: ribonuclease E/G-like protein, ch... 57 2e-06
ref|XP_006469419.1| PREDICTED: ribonuclease E/G-like protein, ch... 57 2e-06
ref|XP_006447836.1| hypothetical protein CICLE_v10014166mg [Citr... 57 2e-06
>ref|XP_006340804.1| PREDICTED: ribonuclease E/G-like protein, chloroplastic-like
isoform X2 [Solanum tuberosum]
Length = 967
Score = 279 bits (714), Expect = 2e-73
Identities = 138/160 (86%), Positives = 148/160 (92%)
Frame = -2
Query: 520 LLHHLAESDASGDVICEDKIVEGLDSENLKSGFLNQSTLSEDLWSKCEVNANDASSGTLC 341
LLHHLAESDASGDVIC+DKIVEGLD ENL+SGFLNQSTLSE LWSK +VNANDASSGTLC
Sbjct: 162 LLHHLAESDASGDVICDDKIVEGLDCENLESGFLNQSTLSETLWSKYQVNANDASSGTLC 221
Query: 340 ARYAYVEEPWLLQACTSSPSFDAEMAPDNCEIERSDNEDKAQPSFNDQLEQLAHPSSRNQ 161
A YA+VEEPWLLQACTSSPSFDAEMAP +CE+E+SDN+D+AQP F+DQLEQLA SS NQ
Sbjct: 222 ATYAHVEEPWLLQACTSSPSFDAEMAPYDCEVEQSDNKDEAQPPFSDQLEQLAQTSSSNQ 281
Query: 160 HEQIPENLLAVDQCDEISKEDSFTTIILINSSVCTVQRIA 41
HEQIPE LL VDQCD ISKEDSFTTIILINSSVCTVQRIA
Sbjct: 282 HEQIPEKLLDVDQCDAISKEDSFTTIILINSSVCTVQRIA 321
>ref|XP_006340803.1| PREDICTED: ribonuclease E/G-like protein, chloroplastic-like
isoform X1 [Solanum tuberosum]
Length = 968
Score = 279 bits (714), Expect = 2e-73
Identities = 138/160 (86%), Positives = 148/160 (92%)
Frame = -2
Query: 520 LLHHLAESDASGDVICEDKIVEGLDSENLKSGFLNQSTLSEDLWSKCEVNANDASSGTLC 341
LLHHLAESDASGDVIC+DKIVEGLD ENL+SGFLNQSTLSE LWSK +VNANDASSGTLC
Sbjct: 163 LLHHLAESDASGDVICDDKIVEGLDCENLESGFLNQSTLSETLWSKYQVNANDASSGTLC 222
Query: 340 ARYAYVEEPWLLQACTSSPSFDAEMAPDNCEIERSDNEDKAQPSFNDQLEQLAHPSSRNQ 161
A YA+VEEPWLLQACTSSPSFDAEMAP +CE+E+SDN+D+AQP F+DQLEQLA SS NQ
Sbjct: 223 ATYAHVEEPWLLQACTSSPSFDAEMAPYDCEVEQSDNKDEAQPPFSDQLEQLAQTSSSNQ 282
Query: 160 HEQIPENLLAVDQCDEISKEDSFTTIILINSSVCTVQRIA 41
HEQIPE LL VDQCD ISKEDSFTTIILINSSVCTVQRIA
Sbjct: 283 HEQIPEKLLDVDQCDAISKEDSFTTIILINSSVCTVQRIA 322
>ref|NP_001234480.1| ribonuclease E [Solanum lycopersicum] gi|166203325|gb|ABY84671.1|
ribonuclease E [Solanum lycopersicum]
Length = 935
Score = 274 bits (700), Expect = 1e-71
Identities = 135/160 (84%), Positives = 147/160 (91%)
Frame = -2
Query: 520 LLHHLAESDASGDVICEDKIVEGLDSENLKSGFLNQSTLSEDLWSKCEVNANDASSGTLC 341
LLHHLAESDASGDVIC++KIVEGLD ENL+SGF+NQSTLSE LWSK EVN+NDASSGTLC
Sbjct: 128 LLHHLAESDASGDVICDNKIVEGLDCENLESGFVNQSTLSETLWSKYEVNSNDASSGTLC 187
Query: 340 ARYAYVEEPWLLQACTSSPSFDAEMAPDNCEIERSDNEDKAQPSFNDQLEQLAHPSSRNQ 161
A YA+VEEPWLLQAC SPSFDAEMAPD+ E+E+SDN+D+AQP F+DQLEQLA PSS NQ
Sbjct: 188 ATYAHVEEPWLLQACMLSPSFDAEMAPDDFEVEQSDNKDEAQPPFSDQLEQLAQPSSSNQ 247
Query: 160 HEQIPENLLAVDQCDEISKEDSFTTIILINSSVCTVQRIA 41
HEQIPE LL VDQCD ISKEDSFTTIILINSSVCTVQRIA
Sbjct: 248 HEQIPEKLLDVDQCDAISKEDSFTTIILINSSVCTVQRIA 287
>emb|CBI28473.3| unnamed protein product [Vitis vinifera]
Length = 934
Score = 65.5 bits (158), Expect = 7e-09
Identities = 53/149 (35%), Positives = 80/149 (53%), Gaps = 5/149 (3%)
Frame = -2
Query: 472 EDKIVEGLDSENLKSGFLNQSTLSEDLWSKCE-----VNANDASSGTLCARYAYVEEPWL 308
ED+I + L S++L FL+ ++ + +S E ++ S+GT+ R VEEPWL
Sbjct: 223 EDEIAKCLKSDSLSKLFLDDLSVEDKSFSDNEDTISAMSKGLDSNGTVSMRDQPVEEPWL 282
Query: 307 LQACTSSPSFDAEMAPDNCEIERSDNEDKAQPSFNDQLEQLAHPSSRNQHEQIPENLLAV 128
LQ+ S + EM + S N D AQ +++H +Q E LL
Sbjct: 283 LQS--SLIASKEEMVSN-----MSKNIDAAQV-------EVSHLKLLDQSYLHTEKLLPE 328
Query: 127 DQCDEISKEDSFTTIILINSSVCTVQRIA 41
+ + ISK+DS +T+ILINSS+CT+QRIA
Sbjct: 329 EGTNLISKDDSVSTVILINSSICTMQRIA 357
>ref|XP_002267175.1| PREDICTED: uncharacterized protein LOC100256290 [Vitis vinifera]
Length = 1019
Score = 65.5 bits (158), Expect = 7e-09
Identities = 53/149 (35%), Positives = 80/149 (53%), Gaps = 5/149 (3%)
Frame = -2
Query: 472 EDKIVEGLDSENLKSGFLNQSTLSEDLWSKCE-----VNANDASSGTLCARYAYVEEPWL 308
ED+I + L S++L FL+ ++ + +S E ++ S+GT+ R VEEPWL
Sbjct: 223 EDEIAKCLKSDSLSKLFLDDLSVEDKSFSDNEDTISAMSKGLDSNGTVSMRDQPVEEPWL 282
Query: 307 LQACTSSPSFDAEMAPDNCEIERSDNEDKAQPSFNDQLEQLAHPSSRNQHEQIPENLLAV 128
LQ+ S + EM + S N D AQ +++H +Q E LL
Sbjct: 283 LQS--SLIASKEEMVSN-----MSKNIDAAQV-------EVSHLKLLDQSYLHTEKLLPE 328
Query: 127 DQCDEISKEDSFTTIILINSSVCTVQRIA 41
+ + ISK+DS +T+ILINSS+CT+QRIA
Sbjct: 329 EGTNLISKDDSVSTVILINSSICTMQRIA 357
>gb|EOX93566.1| RNAse E/G-like [Theobroma cacao]
Length = 1015
Score = 62.4 bits (150), Expect = 6e-08
Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 7/151 (4%)
Frame = -2
Query: 472 EDKIVEGLDSE-NLKSGFLNQSTLSEDLWSKCEVNANDASSGT-----LCARYAYVEEPW 311
++++++ L S+ N FLN T+ +++ V D+ G L R VEEPW
Sbjct: 223 DEEMMKHLKSDLNESEPFLNDLTVKDEIEPSDVVAICDSEEGLYSYTLLSERDQPVEEPW 282
Query: 310 LLQACTSSPSFDAEMAPDNCEIERSDNEDKAQPSFNDQL-EQLAHPSSRNQHEQIPENLL 134
SSP F D+ + +ND + +++ + NQ QI E L
Sbjct: 283 FFH---SSPFF----------FTYGDDLEADMLKYNDSVKDEITRLEANNQQYQITEKFL 329
Query: 133 AVDQCDEISKEDSFTTIILINSSVCTVQRIA 41
+ ISK+DS +T+ILINSS+CT+QRIA
Sbjct: 330 PEESSPIISKKDSVSTVILINSSICTMQRIA 360
>ref|XP_002524601.1| hypothetical protein RCOM_1213430 [Ricinus communis]
gi|223536154|gb|EEF37809.1| hypothetical protein
RCOM_1213430 [Ricinus communis]
Length = 963
Score = 60.1 bits (144), Expect = 3e-07
Identities = 51/152 (33%), Positives = 74/152 (48%), Gaps = 8/152 (5%)
Frame = -2
Query: 472 EDKIVEGLDSENLKS-GFLNQSTLSEDLW-SKCEVNA--NDASSGTLCARYAYVEEPWLL 305
E +I+ G+D +S FLN T L+ + N+ D + L R VEEPWLL
Sbjct: 154 EHQIMNGVDIVLKESEAFLNDVTFENKLYFNNKHTNSVGQDDQNLVLSERDQPVEEPWLL 213
Query: 304 QACTSSPSFDAEMAPDNCEIERSDNEDKAQPSFNDQLEQLAHPS----SRNQHEQIPENL 137
Q+ I ++DK P+ + A+ S + +QH Q+ + L
Sbjct: 214 QS----------------SIIFVISKDKIMPNISKNNNIAANDSKAWDANSQHLQVKDKL 257
Query: 136 LAVDQCDEISKEDSFTTIILINSSVCTVQRIA 41
D + I K+DS +TIILINSS+CT+QRIA
Sbjct: 258 SPADGSNFILKDDSISTIILINSSICTMQRIA 289
>ref|XP_006469421.1| PREDICTED: ribonuclease E/G-like protein, chloroplastic-like
isoform X3 [Citrus sinensis]
Length = 818
Score = 57.8 bits (138), Expect = 1e-06
Identities = 49/151 (32%), Positives = 77/151 (50%), Gaps = 5/151 (3%)
Frame = -2
Query: 478 ICEDKIVEGLDSENLKSG-FLNQSTLSEDLWS----KCEVNANDASSGTLCARYAYVEEP 314
+ +D+IV+ L+S++ +S F N T ++ L+S K + L R +EEP
Sbjct: 24 LTDDEIVKHLESDSTESEPFWNDLTHADQLYSYDDGKTATHEVSNFDMALSERDQPIEEP 83
Query: 313 WLLQACTSSPSFDAEMAPDNCEIERSDNEDKAQPSFNDQLEQLAHPSSRNQHEQIPENLL 134
WL Q+ ++ + PD E N +K + D S NQ Q E+LL
Sbjct: 84 WLFQSSPILLVYEDTVKPDMPE---KSNNEKDEAMILD---------SDNQKFQDTESLL 131
Query: 133 AVDQCDEISKEDSFTTIILINSSVCTVQRIA 41
++ ISK++ +T+ILINSS+CT+QRIA
Sbjct: 132 P-EKGSLISKDNFVSTVILINSSICTMQRIA 161
>ref|XP_006469420.1| PREDICTED: ribonuclease E/G-like protein, chloroplastic-like
isoform X2 [Citrus sinensis]
Length = 1005
Score = 57.4 bits (137), Expect = 2e-06
Identities = 49/149 (32%), Positives = 76/149 (51%), Gaps = 5/149 (3%)
Frame = -2
Query: 472 EDKIVEGLDSENLKSG-FLNQSTLSEDLWS----KCEVNANDASSGTLCARYAYVEEPWL 308
+D+IV+ L+S++ +S F N T ++ L+S K + L R +EEPWL
Sbjct: 213 DDEIVKHLESDSTESEPFWNDLTHADQLYSYDDGKTATHEVSNFDMALSERDQPIEEPWL 272
Query: 307 LQACTSSPSFDAEMAPDNCEIERSDNEDKAQPSFNDQLEQLAHPSSRNQHEQIPENLLAV 128
Q+ ++ + PD E N +K + D S NQ Q E+LL
Sbjct: 273 FQSSPILLVYEDTVKPDMPE---KSNNEKDEAMILD---------SDNQKFQDTESLLP- 319
Query: 127 DQCDEISKEDSFTTIILINSSVCTVQRIA 41
++ ISK++ +T+ILINSS+CT+QRIA
Sbjct: 320 EKGSLISKDNFVSTVILINSSICTMQRIA 348
>ref|XP_006469419.1| PREDICTED: ribonuclease E/G-like protein, chloroplastic-like
isoform X1 [Citrus sinensis]
Length = 1009
Score = 57.4 bits (137), Expect = 2e-06
Identities = 49/149 (32%), Positives = 76/149 (51%), Gaps = 5/149 (3%)
Frame = -2
Query: 472 EDKIVEGLDSENLKSG-FLNQSTLSEDLWS----KCEVNANDASSGTLCARYAYVEEPWL 308
+D+IV+ L+S++ +S F N T ++ L+S K + L R +EEPWL
Sbjct: 217 DDEIVKHLESDSTESEPFWNDLTHADQLYSYDDGKTATHEVSNFDMALSERDQPIEEPWL 276
Query: 307 LQACTSSPSFDAEMAPDNCEIERSDNEDKAQPSFNDQLEQLAHPSSRNQHEQIPENLLAV 128
Q+ ++ + PD E N +K + D S NQ Q E+LL
Sbjct: 277 FQSSPILLVYEDTVKPDMPE---KSNNEKDEAMILD---------SDNQKFQDTESLLP- 323
Query: 127 DQCDEISKEDSFTTIILINSSVCTVQRIA 41
++ ISK++ +T+ILINSS+CT+QRIA
Sbjct: 324 EKGSLISKDNFVSTVILINSSICTMQRIA 352
>ref|XP_006447836.1| hypothetical protein CICLE_v10014166mg [Citrus clementina]
gi|557550447|gb|ESR61076.1| hypothetical protein
CICLE_v10014166mg [Citrus clementina]
Length = 960
Score = 57.4 bits (137), Expect = 2e-06
Identities = 49/149 (32%), Positives = 76/149 (51%), Gaps = 5/149 (3%)
Frame = -2
Query: 472 EDKIVEGLDSENLKSG-FLNQSTLSEDLWS----KCEVNANDASSGTLCARYAYVEEPWL 308
+D+IV+ L+S++ +S F N T ++ L+S K + L R +EEPWL
Sbjct: 168 DDEIVKHLESDSTESEPFWNDLTHADQLYSYDDGKTATHEVSNFDMALSERDQPIEEPWL 227
Query: 307 LQACTSSPSFDAEMAPDNCEIERSDNEDKAQPSFNDQLEQLAHPSSRNQHEQIPENLLAV 128
Q+ ++ + PD E N +K + D S NQ Q E+LL
Sbjct: 228 FQSSPILLVYEDTVKPDMPE---KSNNEKDEAMILD---------SDNQKFQDTESLLP- 274
Query: 127 DQCDEISKEDSFTTIILINSSVCTVQRIA 41
++ ISK++ +T+ILINSS+CT+QRIA
Sbjct: 275 EKGSLISKDNFVSTVILINSSICTMQRIA 303