BLASTX nr result
ID: Atropa21_contig00035293
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00035293
(1355 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga... 119 3e-24
ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268... 74 2e-19
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali... 91 9e-16
ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665... 90 2e-15
ref|XP_002331075.1| predicted protein [Populus trichocarpa] 74 2e-15
gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana] 86 5e-14
ref|XP_006300939.1| hypothetical protein CARUB_v10021318mg, part... 82 4e-13
ref|XP_006342323.1| PREDICTED: putative ribonuclease H protein A... 77 1e-12
ref|XP_004173733.1| PREDICTED: uncharacterized protein LOC101232... 53 2e-12
gb|AAD26953.1| putative non-LTR retrolelement reverse transcript... 80 3e-12
ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663... 77 1e-11
ref|XP_002332211.1| predicted protein [Populus trichocarpa] 77 1e-11
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298... 53 2e-11
gb|ABD33260.1| non-LTR retroelement reverse transcriptase-like p... 77 2e-11
ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664... 76 3e-11
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga... 75 8e-11
ref|XP_002329612.1| predicted protein [Populus trichocarpa] 74 1e-10
ref|NP_567266.1| RNA-directed DNA polymerase (reverse transcript... 74 2e-10
ref|XP_002313562.1| predicted protein [Populus trichocarpa] 74 2e-10
gb|ABK28243.1| unknown [Arabidopsis thaliana] 74 2e-10
>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1114
Score = 119 bits (298), Expect = 3e-24
Identities = 95/347 (27%), Positives = 164/347 (47%), Gaps = 10/347 (2%)
Frame = +3
Query: 147 KDMIFQQCLLLVERIIARIRCWSSKLLSYNGRLQLIKSVIFKMQTYWVRYFSCLKRLSK- 323
K + F QC L+++I R + W + LLSY GRLQL+K++++ MQ YW + F K+L K
Sbjct: 767 KKLNFSQCKPLIDKITTRAQGWVAHLLSYAGRLQLVKTILYSMQNYWGQIFPLPKKLIKA 826
Query: 324 ---------WLLLFVEFFCGLVAMRSLEKP**LGIPCSCQNLQGV*ILLALVSGIELLYS 476
W + VA L++P G + N+ +L + ++LL++
Sbjct: 827 VETTCRKFLWTGTVDTSYKAPVAWDFLQQPKSTG-GLNVTNM----VLWNKAAILKLLWA 881
Query: 477 GYFHIRKINSGIMDSQL*IKNNELSIFVTPKQAC*LVEDFLCQSMVHKYGPHYSSQPVLS 656
F K+ +++ + N ++ V+ + L + F + ++ + G + V +
Sbjct: 882 ITFKQDKLWVRWVNAYYIKRQNIENVTVSSNTSWILRKIFESRELLTRTG---GWEAVSN 938
Query: 657 RRKIQHQKSYLSLIPQHTIATWNNSVMSIGGLPRHQFILCLAVQNRLATVDRLAEWRIQV 836
+K+Y L + W + + P+ QFIL LA+ NRLAT +R++ W V
Sbjct: 939 HMNFSIKKTYKLLQEDYENVVWKRLICNNKATPKSQFILWLAMLNRLATAERVSRWNRDV 998
Query: 837 SQNCVLCNSNVVERMQHLFFECRYSNFIWTTILT*LGIPRQIGS*IAELNWLSQNIHNSR 1016
S C +C N +E +QHLFF C YS IW +L L + Q + A+ + +++
Sbjct: 999 SPLCKMC-GNEIETIQHLFFNCIYSKEIWGKVLLYLNLQPQADA-QAKKELAIKKARSTK 1056
Query: 1017 PRARMLGFLSAAVVYHIRTKRNARRFHSRHKNKVQIITDIILQWHIR 1157
R ++ + VY I RNA+ F N+ Q + II + +R
Sbjct: 1057 DRNKLYVMMFTESVYAIWLLRNAKVFRGIEINQNQAVKSIIFRIAVR 1103
>ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268376 [Solanum
lycopersicum]
Length = 717
Score = 73.9 bits (180), Expect(2) = 2e-19
Identities = 33/76 (43%), Positives = 52/76 (68%), Gaps = 3/76 (3%)
Frame = +2
Query: 290 QVFLLPKEIIKMVTIVCRVFLWTGSNEIS*KALVAWDTMFLPKSAGGLNIIGFGQWNRVV 469
Q+F++P +IIK++ +CR +LW+G ++ KAL+AWD + PK GGL +I WNR
Sbjct: 620 QLFIIPAKIIKLIEGLCRSYLWSGVGYVTKKALIAWDKVCSPKYEGGLGLINLKIWNRSA 679
Query: 470 IFRL---LSHKKDKLW 508
+ +L L++K+DKLW
Sbjct: 680 VTKLCWDLANKEDKLW 695
Score = 50.4 bits (119), Expect(2) = 2e-19
Identities = 20/41 (48%), Positives = 31/41 (75%)
Frame = +3
Query: 177 LVERIIARIRCWSSKLLSYNGRLQLIKSVIFKMQTYWVRYF 299
L+E+++ARI W++K LSY GR QL+K+V+F +Q W + F
Sbjct: 582 LIEKVMARINSWTAKKLSYAGRAQLVKTVLFGVQALWAQLF 622
>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
gi|20197043|gb|AAM14892.1| putative reverse transcriptase
[Arabidopsis thaliana]
Length = 1412
Score = 91.3 bits (225), Expect = 9e-16
Identities = 93/343 (27%), Positives = 150/343 (43%), Gaps = 26/343 (7%)
Frame = +3
Query: 141 LPKDMIFQQCLLLVERIIARIRCWSSKLLSYNGRLQLIKSVIFKMQTYWVRYF----SCL 308
+ K M CL L+E+I +RI W ++ LSY GRLQL+ SVI + +W+ F +C+
Sbjct: 1032 MTKRMTLADCLPLLEKIRSRISSWKNRFLSYAGRLQLLNSVISSLTKFWISAFRLPRACI 1091
Query: 309 KRLSKWLLLFVEFFCGL------VAMRSLEKP**---LGIPC--SCQNLQGV*ILLALVS 455
+ + + F+ L VA + KP LG+ + ++ LVS
Sbjct: 1092 REIEQISAAFLWSGTDLNPHKAKVAWHDVCKPKSEGGLGLRSLVDANKICCFKLIWRLVS 1151
Query: 456 GIELLYSGYFH---IRKINSGIM--------DSQL*IKNNELSIFVTPKQAC*LVEDFLC 602
L+ + IR + + D L EL + + C + LC
Sbjct: 1152 AKHSLWVNWIQNNLIRTVAEALSSHRRRSHRDDILNDIEEELEKLLC-RGICTEQDRSLC 1210
Query: 603 QSMVHKYGPHYSSQPVLSRRKIQHQKSYLSLIPQHTIATWNNSVMSIGGLPRHQFILCLA 782
+S+ ++ + S +I HQ L+ Q W+ ++ G P+ FI LA
Sbjct: 1211 RSIGGQFKAKFFSP------EIWHQIREQGLVKQ-----WHKAIWFSGATPKFTFISWLA 1259
Query: 783 VQNRLATVDRLAEWRIQVSQNCVLCNSNVVERMQHLFFECRYSNFIWTTILT*LGIPRQI 962
+RL T D++A W +S CVLCN + E HLFF C +S+ IW + L + R
Sbjct: 1260 AHDRLTTGDKMASWNRGISSVCVLCNIS-AESRDHLFFSCNFSSHIWDRLTRRLLLCRYT 1318
Query: 963 GS*IAELNWLSQNIHNSRPRARMLGFLSAAVVYHIRTKRNARR 1091
+ A L LS + R +L ++ A ++ + +RN RR
Sbjct: 1319 TNFPALLLLLSGQDFSGTKRF-LLRYVFQATIHTLWRERNKRR 1360
>ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665746 [Glycine max]
Length = 506
Score = 90.1 bits (222), Expect = 2e-15
Identities = 82/315 (26%), Positives = 136/315 (43%), Gaps = 9/315 (2%)
Frame = +3
Query: 177 LVERIIARIRCWSSKLLSYNGRLQLIKSVIFKMQTYWVRYFSCLKRLSKWLLLFVEFFCG 356
L+++I+ +I+ W+++LLSY GRLQL+ SV+F + YW+ F K +L +E C
Sbjct: 160 LIDKIVGKIKHWTARLLSYAGRLQLVNSVMFALTNYWLNCFP----FPKSVLQKIEAICR 215
Query: 357 LVAMR-----SLEKP**LGIPCSCQNLQGV*ILLALVSGIELLYSGYFHIRKINSGIMDS 521
+ S + P CS ++ G+ I+ + L +++ +
Sbjct: 216 IFLWTGGFEGSRKSPVAWKQICSPRSCGGLNIIDIDIWNKANLMKLLWNLSSKEDSLWVK 275
Query: 522 QL*---IKNNELSIFVTPKQAC*LVEDFLCQSM-VHKYGPHYSSQPVLSRRKIQHQKSYL 689
+ +K +EL +++ L Q + K + + ++ R I K Y
Sbjct: 276 WIQAYYVKRSELMHIEMKNTDSWIMKAILKQREDLEKID---NMEELMIRGSINMGKLYR 332
Query: 690 SLIPQHTIATWNNSVMSIGGLPRHQFILCLAVQNRLATVDRLAEWRIQVSQNCVLCNSNV 869
L W N + PR FIL LA RL+T DRL ++ + ++C C+
Sbjct: 333 KLQDCGQRKEWKNLLYGNTARPRANFILWLACHGRLSTKDRLCKYGMIDDKSCCFCSEE- 391
Query: 870 VERMQHLFFECRYSNFIWTTILT*LGIPRQIGS*IAELNWLSQNIHNSRPRARMLGFLSA 1049
E M HLFF C S +W +L + I EL+WL+ + RA +L A
Sbjct: 392 -ESMNHLFFVCDNSKRVWMEVLQWVQIRHDPSDWPNELHWLTHHTKGKGTRAAVLKMAIA 450
Query: 1050 AVVYHIRTKRNARRF 1094
+Y I RN + F
Sbjct: 451 ETIYEIWNIRNNKIF 465
>ref|XP_002331075.1| predicted protein [Populus trichocarpa]
Length = 517
Score = 58.5 bits (140), Expect(2) = 2e-15
Identities = 26/62 (41%), Positives = 40/62 (64%)
Frame = +2
Query: 293 VFLLPKEIIKMVTIVCRVFLWTGSNEIS*KALVAWDTMFLPKSAGGLNIIGFGQWNRVVI 472
+FLLP ++IK V + + FLW+GS+ + A VAWD + LPK GGL I +WN++ +
Sbjct: 115 LFLLPGQVIKNVEQIMKSFLWSGSDMRTTGAKVAWDQVCLPKKEGGLGIKSIKEWNKIAL 174
Query: 473 FR 478
+
Sbjct: 175 LK 176
Score = 52.0 bits (123), Expect(2) = 2e-15
Identities = 22/44 (50%), Positives = 31/44 (70%)
Frame = +3
Query: 168 CLLLVERIIARIRCWSSKLLSYNGRLQLIKSVIFKMQTYWVRYF 299
C LV+RI +++R W+ + LSY GR+QLI SV+F +Q YW F
Sbjct: 73 CKGLVDRITSKVRHWTCRTLSYAGRVQLINSVLFSIQVYWASLF 116
Score = 73.9 bits (180), Expect = 1e-10
Identities = 45/139 (32%), Positives = 63/139 (45%)
Frame = +3
Query: 720 WNNSVMSIGGLPRHQFILCLAVQNRLATVDRLAEWRIQVSQNCVLCNSNVVERMQHLFFE 899
W++ V +PRH F+L +AVQ +L T D+L + I C LC N E HLFFE
Sbjct: 342 WHDIVWFKNAVPRHSFLLWMAVQQKLTTQDKLHRFGIHGPNRCSLCLRN-NEDHNHLFFE 400
Query: 900 CRYSNFIWTTILT*LGIPRQIGS*IAELNWLSQNIHNSRPRARMLGFLSAAVVYHIRTKR 1079
C Y+ IW + IPR + W + + H AA VYH+ +R
Sbjct: 401 CSYTKAIWWDVCDRCDIPRMTKGWDEWIRWATVSWHGKSFVNFSCKLSFAATVYHVWQER 460
Query: 1080 NARRFHSRHKNKVQIITDI 1136
NAR F + ++ I
Sbjct: 461 NARIFAGMSRTPNLVLNQI 479
>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
Length = 653
Score = 85.5 bits (210), Expect = 5e-14
Identities = 78/330 (23%), Positives = 142/330 (43%), Gaps = 13/330 (3%)
Frame = +3
Query: 177 LVERIIARIRCWSSKLLSYNGRLQLIKSVIFKMQTYWVRYF----SCLKRLSKWLLLFVE 344
L+E I +I W+++ LSY GRL LI SV++ + +W+ F C++ + K F+
Sbjct: 316 LLEHIKKKIGTWTTRYLSYAGRLNLITSVLWSICNFWLAAFRLPRECIREIDKICSAFLW 375
Query: 345 FFCGLVAMRSLEKP**LGIPCSCQNLQGV*IL----LALVSGIELLYSGYFHIRKINSGI 512
L ++ G C + G+ + + VS ++L++ H +
Sbjct: 376 SGPDLNPRKTRVC---WGDVCKPKQEGGLGLRSLKEMNEVSCLKLIWRIVSHTNSLWVRW 432
Query: 513 MDSQL*IKNNELSIFVTPKQAC*LVEDFLCQSMVHKYGPHYSSQPVLSRRKIQHQKSYLS 692
++ L + S+ T ++ L + +Y P +S++ ++ +
Sbjct: 433 IEQYLLKHDTFWSVQTTTN-----MDSVLWRGRNDEYMPKFSTRDTWNQTR--------- 478
Query: 693 LIPQHTIATWNNSVMSIGGLPRHQFILCLAVQNRLATVDRLAEWRIQVSQNCVLCNSNVV 872
T TW+ + P+ F LAVQNRL+T D++ +W ++S CVLCN+N +
Sbjct: 479 --NTSTPVTWHMGIWFAHATPKFSFCAWLAVQNRLSTGDKMLQWNRRLSPTCVLCNNN-I 535
Query: 873 ERMQHLFFECRYSNFIWTTILT*LGIPRQIGS*IAELNWLS-----QNIHNSRPRARMLG 1037
E HLFF C Y+ IW + + I NW + +R + +
Sbjct: 536 ETRNHLFFSCCYTAEIWE------NLAKNIYKAKFSTNWSTILTSVSTTWRNRTESFLAR 589
Query: 1038 FLSAAVVYHIRTKRNARRFHSRHKNKVQII 1127
++ A ++ I +RN RR R + +I
Sbjct: 590 YIFQATIHTIWHERNGRRHGERSNSATHLI 619
>ref|XP_006300939.1| hypothetical protein CARUB_v10021318mg, partial [Capsella rubella]
gi|482569649|gb|EOA33837.1| hypothetical protein
CARUB_v10021318mg, partial [Capsella rubella]
Length = 290
Score = 82.4 bits (202), Expect = 4e-13
Identities = 55/177 (31%), Positives = 89/177 (50%), Gaps = 4/177 (2%)
Frame = +3
Query: 678 KSYLSLIPQHTIATWNNSVMSIGGLPRHQFILCLAVQNRLATVDRLAEWRIQVSQNCVLC 857
K+++S P + W SV +P+H FI + ++NRL T DRL W + V C+LC
Sbjct: 99 KTWISTHPAGPLVPWFKSVWFKERIPKHAFISWVVIRNRLTTRDRLRGWGMNVPSECLLC 158
Query: 858 NSNVVERMQHLFFECRYSNFIWTTILT--*LGIPRQIGS*IAELNWLSQNIHNSRPRARM 1031
S+ R+ HLFFEC YS+ +W++ T L P +A W+ + S+ +
Sbjct: 159 TSSAESRL-HLFFECAYSHEVWSSFFTHPSLSPPAMFEDIVA---WVRSS--RSKKLRTI 212
Query: 1032 LGFLSAAVVYHIRTKRNARRFHSRHKNKVQIITDI--ILQWHIRG*KMCKWSRLLNS 1196
+ AVVY + +RN+R S K+ II +I +++ + G C+ +NS
Sbjct: 213 CKLIFQAVVYGLWRERNSRLHTSSFKSPAIIIKEIQLVMRAKLAGLDHCQLQIKMNS 269
>ref|XP_006342323.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 170
Score = 76.6 bits (187), Expect(2) = 1e-12
Identities = 33/76 (43%), Positives = 52/76 (68%), Gaps = 3/76 (3%)
Frame = +2
Query: 290 QVFLLPKEIIKMVTIVCRVFLWTGSNEIS*KALVAWDTMFLPKSAGGLNIIGFGQWNRVV 469
Q+F++P ++IK++ + CR ++W+G+N I+ KALV W + PKS GGLN+I WN+
Sbjct: 16 QLFIIPSKVIKLIDVHCRSYVWSGTNTITKKALVVWKRVCSPKSVGGLNLINLHSWNKAG 75
Query: 470 IFRL---LSHKKDKLW 508
I + L +K+DKLW
Sbjct: 76 IAKHCWDLEYKQDKLW 91
Score = 24.6 bits (52), Expect(2) = 1e-12
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +3
Query: 249 LIKSVIFKMQTYWVRYF 299
L++SV+F +Q YW + F
Sbjct: 2 LVQSVLFGIQAYWAQLF 18
>ref|XP_004173733.1| PREDICTED: uncharacterized protein LOC101232446, partial [Cucumis
sativus]
Length = 382
Score = 53.1 bits (126), Expect(2) = 2e-12
Identities = 22/44 (50%), Positives = 33/44 (75%)
Frame = +3
Query: 168 CLLLVERIIARIRCWSSKLLSYNGRLQLIKSVIFKMQTYWVRYF 299
C L++RI +RIR WS+++LS+ GRLQL++SV+ +Q YW F
Sbjct: 53 CDPLIQRITSRIRSWSARVLSFAGRLQLVRSVLRSLQVYWASVF 96
Score = 47.4 bits (111), Expect(2) = 2e-12
Identities = 29/75 (38%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Frame = +2
Query: 293 VFLLPKEIIKMVTIVCRVFLWTGSNEIS*KALVAWDTMFLPKSAGGLNIIGFGQWN---R 463
VF+LP ++ + V + R +LW G E A VAWD + LP GGL I WN
Sbjct: 95 VFMLPMKVHRDVDKILRSYLWRGKEEGRGGAKVAWDEVCLPFDEGGLAIRDGSSWNIAST 154
Query: 464 VVIFRLLSHKKDKLW 508
+ I LL K LW
Sbjct: 155 LKILWLLLVKSGSLW 169
>gb|AAD26953.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
thaliana]
Length = 323
Score = 79.7 bits (195), Expect = 3e-12
Identities = 56/168 (33%), Positives = 86/168 (51%), Gaps = 3/168 (1%)
Frame = +3
Query: 612 VHKYGP-HYSSQPVLSRRKIQHQKSYLSLIPQHTIATWNNSVMSIGGLPRHQFILCLAVQ 788
V+K+ P H++ + S K++ +L P + W SV +P+H FI +A
Sbjct: 122 VYKWKPDHHAPSNIFSA-----SKTWTALNPDGVLVPWQKSVWFKDRIPKHAFICWVAAW 176
Query: 789 NRLATVDRLAEWRIQVSQNCVLCNSNVVERMQHLFFECRYSNFIWTTILT*LGI--PRQI 962
RL T DRL +W + + CVLCN V E HLFF+C++SN IW+ + G+ P
Sbjct: 177 KRLHTRDRLTQWGLNIPTVCVLCNV-VDETHDHLFFQCQFSNEIWSFFMIRAGMTPPHLF 235
Query: 963 GS*IAELNWLSQNIHNSRPRARMLGFLSAAVVYHIRTKRNARRFHSRH 1106
G L WL ++ +S+ + ++ L A VY I +RN R H+ H
Sbjct: 236 G---PILLWL-KSASSSKNLSLIIKLLFQASVYLIWRERNC-RIHTTH 278
>ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663533 [Glycine max]
Length = 514
Score = 77.4 bits (189), Expect = 1e-11
Identities = 76/275 (27%), Positives = 112/275 (40%), Gaps = 24/275 (8%)
Frame = +3
Query: 171 LLLVERIIARIRCWSSKLLSYNGRLQLIKSVIFKMQTYWVRYFSCLKRLSKWLLLFVEFF 350
L LVE+I+ +IR WSSKLLS GR+QL++S+I + YW+ F K++ + + F
Sbjct: 261 LPLVEKIVGKIRHWSSKLLSIAGRIQLVRSIITAIAQYWMSVFPMPKKVIQKIDSICRSF 320
Query: 351 C----------GLVAMRSLEKP**LGIPCSCQNLQGV*I---------LLALVSGIELLY 473
LVA + + KP C NL + + L + S + L+
Sbjct: 321 IWSGSAEVKRKSLVAWKQVCKP----ARCGGLNLINLELWNVTAMLKCLWNICSKEDNLW 376
Query: 474 SGYFHIRKINSGIMDSQL*IKNNELSIFVTPKQAC*LVEDFLCQSMVHKYGPHYSSQ--- 644
+ H + + S IK+N I V K P ++
Sbjct: 377 VKWIHAYFLKGDNVMSAT-IKSNSTWIL----------------KSVMKQRPQVNNLQLV 419
Query: 645 --PVLSRRKIQHQKSYLSLIPQHTIATWNNSVMSIGGLPRHQFILCLAVQNRLATVDRLA 818
+L +RK ++ Y+ L+ H W + PR L LA QNRLAT RL
Sbjct: 420 WIEMLRKRKFSMKQVYMELVEDHNKIDWFRLLRYNRARPRANVTLWLACQNRLATKTRLK 479
Query: 819 EWRIQVSQNCVLCNSNVVERMQHLFFECRYSNFIW 923
+ C LC E + HL F CR + IW
Sbjct: 480 NMNMIQCSLCSLCKEQ-DEDLDHLMFSCRVTKAIW 513
>ref|XP_002332211.1| predicted protein [Populus trichocarpa]
Length = 1386
Score = 77.4 bits (189), Expect = 1e-11
Identities = 51/158 (32%), Positives = 74/158 (46%), Gaps = 2/158 (1%)
Frame = +3
Query: 669 QHQKSYLSLIPQHTIATWNNSVMSIGGLPRHQFILCLAVQNRLATVDRLAEWRIQVSQNC 848
+H + + ++ H I + N+V PRH F+L +AVQ +L T D+L + I C
Sbjct: 1204 EHLRRHRQMVEWHDIVWFKNAV------PRHSFLLWMAVQQKLTTQDKLYRFGIHGPNRC 1257
Query: 849 VLCNSNVVERMQHLFFECRYSNFIWTTILT*LGIPRQIGS*IAELNWLSQNIHNSR--PR 1022
LC N E HLFFEC Y+ IW + IPR + W + + H
Sbjct: 1258 SLCLRN-NEDHNHLFFECSYTKAIWWDVCDRCDIPRMTKGWDEWIRWATVSWHGKSFVNF 1316
Query: 1023 ARMLGFLSAAVVYHIRTKRNARRFHSRHKNKVQIITDI 1136
+R L F AA VYH+ +RNAR F + ++ I
Sbjct: 1317 SRKLSF--AATVYHVWQERNARIFAGMSRTPNLVLNQI 1352
>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
subsp. vesca]
Length = 958
Score = 53.1 bits (126), Expect(2) = 2e-11
Identities = 24/54 (44%), Positives = 36/54 (66%)
Frame = +3
Query: 162 QQCLLLVERIIARIRCWSSKLLSYNGRLQLIKSVIFKMQTYWVRYFSCLKRLSK 323
Q C L++RI RI+ W +K+LS+ GRLQLI+SV+ +Q YW + K++ K
Sbjct: 606 QDCSPLLDRIETRIKSWENKVLSFAGRLQLIQSVLSSIQVYWASHLILPKKVLK 659
Score = 43.9 bits (102), Expect(2) = 2e-11
Identities = 23/64 (35%), Positives = 34/64 (53%)
Frame = +2
Query: 299 LLPKEIIKMVTIVCRVFLWTGSNEIS*KALVAWDTMFLPKSAGGLNIIGFGQWNRVVIFR 478
+LPK+++K + R FLW G+ VAW + LPK GGL I WN+ +
Sbjct: 652 ILPKKVLKDIEKRLRCFLWAGNCSGRAATKVAWSEICLPKCEGGLGIKDLHCWNKAL--- 708
Query: 479 LLSH 490
++SH
Sbjct: 709 MISH 712
>gb|ABD33260.1| non-LTR retroelement reverse transcriptase-like protein, related
[Medicago truncatula]
Length = 120
Score = 76.6 bits (187), Expect = 2e-11
Identities = 32/65 (49%), Positives = 48/65 (73%)
Frame = +2
Query: 290 QVFLLPKEIIKMVTIVCRVFLWTGSNEIS*KALVAWDTMFLPKSAGGLNIIGFGQWNRVV 469
QVF+LP++++K++ CRVFLWTG + S +AL+AW+ + LPK+AGG N+I WN+
Sbjct: 56 QVFVLPQKVLKLIQTACRVFLWTGKSGTSKRALIAWERICLPKTAGGWNVIDLKVWNQAA 115
Query: 470 IFRLL 484
I +LL
Sbjct: 116 ICKLL 120
>ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664824 [Glycine max]
Length = 939
Score = 76.3 bits (186), Expect = 3e-11
Identities = 48/147 (32%), Positives = 69/147 (46%)
Frame = +3
Query: 675 QKSYLSLIPQHTIATWNNSVMSIGGLPRHQFILCLAVQNRLATVDRLAEWRIQVSQNCVL 854
+K YL+L + +W + + PR F L A RLA+ DRL ++ + V NC
Sbjct: 766 KKIYLALFEESEKMSWRTLMCNNLARPRALFCLWQACHFRLASKDRLIKFGLNVDANCAF 825
Query: 855 CNSNVVERMQHLFFECRYSNFIWTTILT*LGIPRQIGS*IAELNWLSQNIHNSRPRARML 1034
C+S +E +HLFF C IWT +L L I + ELNW+++ RA +L
Sbjct: 826 CSS--MESHEHLFFGCIELKTIWTAVLNWLQIIHMPSTWSEELNWITRKCKGKGWRAMLL 883
Query: 1035 GFLSAAVVYHIRTKRNARRFHSRHKNK 1115
+YHI RN R F N+
Sbjct: 884 KCAFTETIYHIWAYRNHRVFGGNVNNR 910
Score = 69.7 bits (169), Expect = 3e-09
Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Frame = +2
Query: 278 NILGQVFLLPKEIIKMVTIVCRVFLWTGSNEIS*KALVAWDTMFLPKSAGGLNIIGFGQW 457
N Q LPK +I + +CR FLW G++ IS K+ +AW+ + PK GGLNII W
Sbjct: 636 NFWMQCLPLPKFVIMRINAICRSFLWIGNSNISRKSPIAWEKVCSPKINGGLNIINLAIW 695
Query: 458 NRVVIFRLL---SHKKDKLW 508
N++ I +LL +K D LW
Sbjct: 696 NKISILKLLWNVCNKSDNLW 715
>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1110
Score = 74.7 bits (182), Expect = 8e-11
Identities = 38/80 (47%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Frame = +2
Query: 278 NILGQVFLLPKEIIKMVTIVCRVFLWTGSNEIS*KALVAWDTMFLPKSAGGLNIIGFGQW 457
N +F L K++I+ V VCR FLWTG E + KA VAW T+ PKS GG N+I W
Sbjct: 808 NYWAHIFPLSKKVIQAVEKVCRKFLWTGKTEETKKAPVAWATIQRPKSRGGWNVINMKYW 867
Query: 458 NRVVIFRLL---SHKKDKLW 508
NR + +LL K+DKLW
Sbjct: 868 NRAAMLKLLWAIEFKRDKLW 887
Score = 72.0 bits (175), Expect = 5e-10
Identities = 45/160 (28%), Positives = 77/160 (48%), Gaps = 1/160 (0%)
Frame = +3
Query: 663 KIQHQKSYLSLIPQHTIATWNNSVMSIGGLPRHQFILCLAVQNRLATVDRLAEWRIQVSQ 842
K +K+Y + W + + P+ +FIL + + RL TVDR++ W +Q
Sbjct: 938 KFSMKKAYKKISENGERVRWRRLICNNYATPKSKFILWMMLHERLPTVDRISRWGVQCDL 997
Query: 843 NCVLCNSNVVERMQHLFFECRYSNFIWTTILT*LGIPRQIGS*IAELNWLSQNIHNSR-P 1019
N LC N E +QHLFF C YS +W+ I + P S ++ +S +R
Sbjct: 998 NYRLCR-NDGETIQHLFFSCSYSAGVWSKICYIMRFP---NSGVSHQEIISSVCGQARKK 1053
Query: 1020 RARMLGFLSAAVVYHIRTKRNARRFHSRHKNKVQIITDII 1139
+ +++ L VY I +RN R F +K++ +++ I+
Sbjct: 1054 KGKLIVMLYTEFVYAIWKQRNKRTFTGENKDENEVLRKIL 1093
Score = 60.8 bits (146), Expect = 1e-06
Identities = 33/69 (47%), Positives = 41/69 (59%)
Frame = +3
Query: 147 KDMIFQQCLLLVERIIARIRCWSSKLLSYNGRLQLIKSVIFKMQTYWVRYFSCLKRLSKW 326
K + + QC LVE I R + W +KLLSY GRLQLIKS++ MQ YW F LSK
Sbjct: 764 KKLTYAQCKPLVEMITNRAQTWMAKLLSYAGRLQLIKSILSSMQNYWAHIFP----LSKK 819
Query: 327 LLLFVEFFC 353
++ VE C
Sbjct: 820 VIQAVEKVC 828
>ref|XP_002329612.1| predicted protein [Populus trichocarpa]
Length = 1046
Score = 73.9 bits (180), Expect = 1e-10
Identities = 46/130 (35%), Positives = 63/130 (48%), Gaps = 2/130 (1%)
Frame = +3
Query: 711 IATWNNSVMSIGGLPRHQFILCLAVQNRLATVDRLAEWRIQVSQNCVLCNSNVVERMQHL 890
+ W++ V +PRH F+L + VQ +L T D+L + I C LC N E HL
Sbjct: 872 LVEWHDIVWFKNAVPRHSFLLWMVVQQKLTTQDKLHRFGIHGPNRCSLCLRN-NEDHNHL 930
Query: 891 FFECRYSNFIWTTILT*LGIPRQIGS*IAELNWLSQNIHNSR--PRARMLGFLSAAVVYH 1064
FFEC Y+ IW + IPR + W + + H +R L F AA VYH
Sbjct: 931 FFECSYTKAIWWDVCDRCDIPRMTKGWDEWIRWATVSWHGKSFINFSRKLSF--AATVYH 988
Query: 1065 IRTKRNARRF 1094
+ +RNAR F
Sbjct: 989 VWQERNARIF 998
>ref|NP_567266.1| RNA-directed DNA polymerase (reverse transcriptase)-related family
protein [Arabidopsis thaliana]
gi|5732057|gb|AAD48956.1|AF149414_5 contains similarity
to a family of Arabidopsis thaliana predicted proteins,
which have similarity to reverse transcriptases; see
T14P8.10 (GB:AF069298) [Arabidopsis thaliana]
gi|7267223|emb|CAB80830.1| AT4g04650 [Arabidopsis
thaliana] gi|332657009|gb|AEE82409.1| RNA-directed DNA
polymerase (reverse transcriptase)-related family protein
[Arabidopsis thaliana]
Length = 332
Score = 73.6 bits (179), Expect = 2e-10
Identities = 51/159 (32%), Positives = 79/159 (49%), Gaps = 4/159 (2%)
Frame = +3
Query: 678 KSYLSLIPQHTIATWNNSVMSIGGLPRHQFILCLAVQNRLATVDRLAEWRIQVSQNCVLC 857
+++ +L PQ W+ +V +P+H FI + NRL T DRL W + + C+LC
Sbjct: 115 RTWSALHPQSHTVPWHKAVWFKNHVPKHAFICWVVAWNRLHTRDRLQNWGLSIPAECLLC 174
Query: 858 NSNVVERMQHLFFECRYSNFIWT--TILT*LGIPRQIGS*IAELNWLSQNIHNSRPR--A 1025
N++ R HLFFEC++S +W T T L P Q+ + LNWL + SR +
Sbjct: 175 NAHDDSR-AHLFFECQFSGVVWRFFTASTNLNPPAQL---MDCLNWL---LSPSREKNIC 227
Query: 1026 RMLGFLSAAVVYHIRTKRNARRFHSRHKNKVQIITDIIL 1142
++ + VY I +RN R ++ I+ DI L
Sbjct: 228 LIIRLAFHSCVYAIWRERNQRLHSGVSRSTESILKDIQL 266
>ref|XP_002313562.1| predicted protein [Populus trichocarpa]
Length = 331
Score = 73.6 bits (179), Expect = 2e-10
Identities = 46/127 (36%), Positives = 62/127 (48%), Gaps = 2/127 (1%)
Frame = +3
Query: 720 WNNSVMSIGGLPRHQFILCLAVQNRLATVDRLAEWRIQVSQNCVLCNSNVVERMQHLFFE 899
W++ V +PRH F+L + VQ +L T D+L + I C LC N E HLFFE
Sbjct: 160 WHDIVWFKNAVPRHSFLLWMVVQQKLTTQDKLHRFGIHGPNRCSLCLRN-NEDHNHLFFE 218
Query: 900 CRYSNFIWTTILT*LGIPRQIGS*IAELNWLSQNIHNSR--PRARMLGFLSAAVVYHIRT 1073
C Y+ IW + IPR + W + + H +R L F AA VYH+
Sbjct: 219 CSYTKAIWWDVCDRCDIPRMTKGWDEWIRWATVSWHGKSFVNFSRKLSF--AATVYHVWQ 276
Query: 1074 KRNARRF 1094
+RNAR F
Sbjct: 277 ERNARIF 283
>gb|ABK28243.1| unknown [Arabidopsis thaliana]
Length = 297
Score = 73.6 bits (179), Expect = 2e-10
Identities = 51/159 (32%), Positives = 79/159 (49%), Gaps = 4/159 (2%)
Frame = +3
Query: 678 KSYLSLIPQHTIATWNNSVMSIGGLPRHQFILCLAVQNRLATVDRLAEWRIQVSQNCVLC 857
+++ +L PQ W+ +V +P+H FI + NRL T DRL W + + C+LC
Sbjct: 115 RTWSALHPQSHTVPWHKAVWFKNHVPKHAFICWVVAWNRLHTRDRLQNWGLSIPAECLLC 174
Query: 858 NSNVVERMQHLFFECRYSNFIWT--TILT*LGIPRQIGS*IAELNWLSQNIHNSRPR--A 1025
N++ R HLFFEC++S +W T T L P Q+ + LNWL + SR +
Sbjct: 175 NAHDDSR-AHLFFECQFSGVVWRFFTASTNLNPPAQL---MDCLNWL---LSPSREKNIC 227
Query: 1026 RMLGFLSAAVVYHIRTKRNARRFHSRHKNKVQIITDIIL 1142
++ + VY I +RN R ++ I+ DI L
Sbjct: 228 LIIRLAFHSCVYAIWRERNQRLHSGVSRSTESILKDIQL 266