BLASTX nr result

ID: Atropa21_contig00035278 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00035278
         (527 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006349285.1| PREDICTED: zinc finger CCCH domain-containin...   168   6e-40
ref|XP_004230418.1| PREDICTED: zinc finger CCCH domain-containin...   158   8e-37

>ref|XP_006349285.1| PREDICTED: zinc finger CCCH domain-containing protein 5-like
           [Solanum tuberosum]
          Length = 761

 Score =  168 bits (426), Expect = 6e-40
 Identities = 83/101 (82%), Positives = 83/101 (82%)
 Frame = -2

Query: 526 DWTAAIADKRKPSSDKSVDLDTDYHYHHNEDIGERGRWEPDEGATRTHCKSSKKYVIDDS 347
           DWTAAI DKRKPSSDKSVD DTDY YHHNEDIGERGRWEPDEGAT TH KSSKK VIDDS
Sbjct: 659 DWTAAITDKRKPSSDKSVDSDTDYPYHHNEDIGERGRWEPDEGATGTHSKSSKKSVIDDS 718

Query: 346 EDHNVESELNDDGDYXXXXXXXXXXSINQKRTGNWDRMDSA 224
           EDHNVESELNDDGDY          SINQKR GN DRMDSA
Sbjct: 719 EDHNVESELNDDGDYNGCTTRGSSRSINQKRRGNSDRMDSA 759


>ref|XP_004230418.1| PREDICTED: zinc finger CCCH domain-containing protein 5-like
           [Solanum lycopersicum]
          Length = 786

 Score =  158 bits (399), Expect = 8e-37
 Identities = 78/101 (77%), Positives = 80/101 (79%)
 Frame = -2

Query: 526 DWTAAIADKRKPSSDKSVDLDTDYHYHHNEDIGERGRWEPDEGATRTHCKSSKKYVIDDS 347
           DWTAAI DKRKPSSDK V  D D+ YHHNEDIGERGRWEPDEGAT TH KSSKK VIDDS
Sbjct: 660 DWTAAITDKRKPSSDKRVHSDRDHPYHHNEDIGERGRWEPDEGATGTHSKSSKKSVIDDS 719

Query: 346 EDHNVESELNDDGDYXXXXXXXXXXSINQKRTGNWDRMDSA 224
           EDHNVESELNDDGDY          SIN+KR GN DRMDSA
Sbjct: 720 EDHNVESELNDDGDYSGGTTRGSSRSINRKRRGNSDRMDSA 760


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