BLASTX nr result
ID: Atropa21_contig00035263
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atropa21_contig00035263 (539 letters) Database: nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EMS49379.1| Retrovirus-related Pol polyprotein LINE-1 [Tritic... 42 3e-07 gb|EMS52533.1| ATP-citrate synthase [Triticum urartu] 42 3e-07 ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840... 36 1e-06 gb|EMT16429.1| hypothetical protein F775_01472 [Aegilops tauschii] 44 5e-06 gb|EMT14674.1| Methyltransferase-like protein 13 [Aegilops tausc... 40 5e-06 >gb|EMS49379.1| Retrovirus-related Pol polyprotein LINE-1 [Triticum urartu] Length = 882 Score = 42.0 bits (97), Expect(3) = 3e-07 Identities = 19/43 (44%), Positives = 28/43 (65%) Frame = +1 Query: 220 LTDGTNKGADQNIEPWKNTREIKRFRISRSKTKYIM*KFSQRR 348 L D + G ++ +E W+ T E K FR+SR+KT+Y+M FS R Sbjct: 267 LVDDSRTGVNRKLELWRQTLESKGFRLSRTKTEYMMCGFSTTR 309 Score = 32.3 bits (72), Expect(3) = 3e-07 Identities = 15/27 (55%), Positives = 20/27 (74%) Frame = +3 Query: 138 LVVDELTNSLQDGIL*CMLLADNVVLI 218 LV+DE+T +Q I CML AD+VVL+ Sbjct: 242 LVMDEVTRDIQGDIPWCMLFADDVVLV 268 Score = 25.0 bits (53), Expect(3) = 3e-07 Identities = 14/44 (31%), Positives = 22/44 (50%) Frame = +2 Query: 2 KYVNARKICTKELITSLRKLVGYTKEFPMTVDLH*GYM*SLHFF 133 KY+ K ++TS+R T +FP+ + LH G S + F Sbjct: 197 KYITLIKDMYDNVVTSVRTSDVDTDDFPIKIGLHQGSALSPYLF 240 >gb|EMS52533.1| ATP-citrate synthase [Triticum urartu] Length = 589 Score = 42.0 bits (97), Expect(3) = 3e-07 Identities = 19/43 (44%), Positives = 28/43 (65%) Frame = +1 Query: 220 LTDGTNKGADQNIEPWKNTREIKRFRISRSKTKYIM*KFSQRR 348 L D + G ++ +E W+ T E K FR+SR+KT+Y+M FS R Sbjct: 510 LVDDSRTGVNRKLELWRQTLESKGFRLSRTKTEYMMCGFSTTR 552 Score = 32.3 bits (72), Expect(3) = 3e-07 Identities = 15/27 (55%), Positives = 20/27 (74%) Frame = +3 Query: 138 LVVDELTNSLQDGIL*CMLLADNVVLI 218 LV+DE+T +Q I CML AD+VVL+ Sbjct: 485 LVMDEVTRDIQGDIPWCMLFADDVVLV 511 Score = 25.0 bits (53), Expect(3) = 3e-07 Identities = 14/44 (31%), Positives = 22/44 (50%) Frame = +2 Query: 2 KYVNARKICTKELITSLRKLVGYTKEFPMTVDLH*GYM*SLHFF 133 KY+ K ++TS+R T +FP+ + LH G S + F Sbjct: 440 KYITLIKDMYDNVVTSVRTSNVDTDDFPIKIGLHQGSALSPYLF 483 >ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840703 [Brachypodium distachyon] Length = 567 Score = 36.2 bits (82), Expect(3) = 1e-06 Identities = 16/40 (40%), Positives = 25/40 (62%) Frame = +1 Query: 220 LTDGTNKGADQNIEPWKNTREIKRFRISRSKTKYIM*KFS 339 L D + G ++ +E W+ E K FR+SR+KT+Y+ FS Sbjct: 317 LVDDSRTGVNRKLELWRQILESKGFRLSRTKTEYMKCGFS 356 Score = 32.3 bits (72), Expect(3) = 1e-06 Identities = 15/27 (55%), Positives = 20/27 (74%) Frame = +3 Query: 138 LVVDELTNSLQDGIL*CMLLADNVVLI 218 LV+DE+T +Q I CML AD+VVL+ Sbjct: 292 LVMDEVTRDIQGDIPWCMLFADDVVLV 318 Score = 28.5 bits (62), Expect(3) = 1e-06 Identities = 15/44 (34%), Positives = 23/44 (52%) Frame = +2 Query: 2 KYVNARKICTKELITSLRKLVGYTKEFPMTVDLH*GYM*SLHFF 133 KY+ K ++TS+R G T +FP+ + LH G S + F Sbjct: 247 KYITLIKDMYDNVVTSVRTSDGDTDDFPIKIGLHQGSALSPYLF 290 >gb|EMT16429.1| hypothetical protein F775_01472 [Aegilops tauschii] Length = 571 Score = 43.5 bits (101), Expect(2) = 5e-06 Identities = 20/43 (46%), Positives = 29/43 (67%) Frame = +1 Query: 220 LTDGTNKGADQNIEPWKNTREIKRFRISRSKTKYIM*KFSQRR 348 L D + GA++ +E W+ T E K FR+SR+KT+Y+M FS R Sbjct: 282 LVDDSRTGANRKLELWRQTLESKGFRLSRTKTEYMMCGFSTTR 324 Score = 32.3 bits (72), Expect(2) = 5e-06 Identities = 15/27 (55%), Positives = 20/27 (74%) Frame = +3 Query: 138 LVVDELTNSLQDGIL*CMLLADNVVLI 218 LV+DE+T +Q I CML AD+VVL+ Sbjct: 257 LVMDEVTRDIQGDIPWCMLFADDVVLV 283 >gb|EMT14674.1| Methyltransferase-like protein 13 [Aegilops tauschii] Length = 1134 Score = 39.7 bits (91), Expect(3) = 5e-06 Identities = 18/43 (41%), Positives = 27/43 (62%) Frame = +1 Query: 220 LTDGTNKGADQNIEPWKNTREIKRFRISRSKTKYIM*KFSQRR 348 L D + G ++ +E W+ T E K R+SR+KT+Y+M FS R Sbjct: 551 LVDDSRTGVNRKLELWRQTLESKGLRLSRTKTEYMMCGFSTTR 593 Score = 31.2 bits (69), Expect(3) = 5e-06 Identities = 14/27 (51%), Positives = 20/27 (74%) Frame = +3 Query: 138 LVVDELTNSLQDGIL*CMLLADNVVLI 218 L++DE+T +Q I CML AD+VVL+ Sbjct: 526 LLMDEVTRDIQGDIPWCMLFADDVVLV 552 Score = 23.9 bits (50), Expect(3) = 5e-06 Identities = 14/44 (31%), Positives = 21/44 (47%) Frame = +2 Query: 2 KYVNARKICTKELITSLRKLVGYTKEFPMTVDLH*GYM*SLHFF 133 KY+ K +TS+R T +FP+ + LH G S + F Sbjct: 481 KYITLIKDMYDNAVTSVRTSDIDTDDFPIKIGLHQGSALSPYLF 524