BLASTX nr result

ID: Atropa21_contig00035254 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00035254
         (743 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004236387.1| PREDICTED: uncharacterized protein LOC101254...    60   8e-12
ref|XP_004241118.1| PREDICTED: uncharacterized protein LOC101264...    61   1e-10
ref|XP_006366878.1| PREDICTED: uncharacterized protein LOC102587...    54   3e-08
gb|ABD32757.1| Integrase, catalytic region [Medicago truncatula]       62   2e-07
ref|XP_004251371.1| PREDICTED: uncharacterized protein LOC101266...    60   8e-07
ref|XP_006343734.1| PREDICTED: uncharacterized protein LOC102590...    54   1e-06
ref|XP_004240202.1| PREDICTED: uncharacterized protein LOC101267...    56   2e-06
ref|XP_006342254.1| PREDICTED: uncharacterized protein LOC102581...    52   2e-06
ref|XP_004234448.1| PREDICTED: uncharacterized protein LOC101267...    58   3e-06
ref|XP_004246827.1| PREDICTED: uncharacterized protein LOC101260...    58   4e-06
ref|XP_004246816.1| PREDICTED: uncharacterized protein LOC101254...    57   8e-06

>ref|XP_004236387.1| PREDICTED: uncharacterized protein LOC101254987 [Solanum
           lycopersicum]
          Length = 620

 Score = 60.5 bits (145), Expect(3) = 8e-12
 Identities = 28/58 (48%), Positives = 38/58 (65%)
 Frame = +1

Query: 328 PAFINLPNSFRVKVTHVGSVTIFSDLVLKNVLLVPAFRINLISIQKFCKQFLCHLSFS 501
           P F+NLPNS R+KVT  GSV I  +  + +VL VP+FR NL+S+ K C +    L F+
Sbjct: 424 PIFVNLPNSERIKVTQAGSVNILPNFTVVDVLFVPSFRCNLLSVHKICSRANSSLLFT 481



 Score = 32.3 bits (72), Expect(3) = 8e-12
 Identities = 21/89 (23%), Positives = 36/89 (40%), Gaps = 8/89 (8%)
 Frame = +2

Query: 500 LILGEARDGVYFLPL--------PINXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTL 655
           ++LGEA+ G+Y L          P++                               V+L
Sbjct: 496 ILLGEAKQGIYLLHTIKPTTSCNPLDVPSISNSVFTLCNESRNLSSSVSFSATVPTDVSL 555

Query: 656 WHIRLGNLPFNSMKRSSFIFHFNEDPSDS 742
           WH RLG+LP ++MK  S + + + +  D+
Sbjct: 556 WHNRLGHLPLSNMKNISSLSYSSSNSIDA 584



 Score = 23.5 bits (49), Expect(3) = 8e-12
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +2

Query: 254 IVNSGASEHTSFSPKCFTSLTPL 322
           I++SGASEH +   K   ++ PL
Sbjct: 399 ILDSGASEHMTHDSKLLFNIHPL 421


>ref|XP_004241118.1| PREDICTED: uncharacterized protein LOC101264015 [Solanum
           lycopersicum]
          Length = 693

 Score = 60.8 bits (146), Expect(3) = 1e-10
 Identities = 28/58 (48%), Positives = 38/58 (65%)
 Frame = +1

Query: 328 PAFINLPNSFRVKVTHVGSVTIFSDLVLKNVLLVPAFRINLISIQKFCKQFLCHLSFS 501
           P F+NLPNS R+KVT  GSV I  +  + +VL VP+FR NL+S+ K C +    L F+
Sbjct: 408 PVFVNLPNSERIKVTQAGSVNILPNFTVVDVLFVPSFRCNLLSVHKICSRANSSLLFT 465



 Score = 27.7 bits (60), Expect(3) = 1e-10
 Identities = 18/71 (25%), Positives = 26/71 (36%), Gaps = 8/71 (11%)
 Frame = +2

Query: 500 LILGEARDGVYFLPL--------PINXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTL 655
           ++LGEA+ G+Y L          P++                               V+L
Sbjct: 480 ILLGEAKQGIYLLHTIKPTTSCNPLDVPSISNSVFTICNESRNLSSSVSFSATVPTDVSL 539

Query: 656 WHIRLGNLPFN 688
           WH RLG+LP N
Sbjct: 540 WHNRLGHLPLN 550



 Score = 23.5 bits (49), Expect(3) = 1e-10
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +2

Query: 254 IVNSGASEHTSFSPKCFTSLTPL 322
           I++SGASEH +   K   ++ PL
Sbjct: 383 ILDSGASEHMTHDSKLLFNIHPL 405


>ref|XP_006366878.1| PREDICTED: uncharacterized protein LOC102587048 isoform X1 [Solanum
           tuberosum]
          Length = 435

 Score = 53.9 bits (128), Expect(2) = 3e-08
 Identities = 38/114 (33%), Positives = 56/114 (49%), Gaps = 7/114 (6%)
 Frame = +2

Query: 2   KGTKNQGAIRGNATV-TADEDTTIEVSQRGNNFISQDXXXXXXQLFQSAIHSDSP----- 163
           K  K +  I+ N  + T +   T+     GN F  Q        L Q   H+D       
Sbjct: 304 KSPKFKVGIKSNEVLGTPNAQHTVFAEVDGNPFSHQQLNY----LLQMLKHADLGDREKL 359

Query: 164 -SDAHAKIIQIAGNIFKDPMAYYTHVNSNSCIVNSGASEHTSFSPKCFTSLTPL 322
            S   A ++  AGNIF  P+ Y T+V+++S I++SG SEH S+  K F+S+ PL
Sbjct: 360 ISQVAANMVHCAGNIFHIPVDYSTYVSTDSWIIDSGVSEHMSYDTKFFSSIHPL 413



 Score = 30.8 bits (68), Expect(2) = 3e-08
 Identities = 13/19 (68%), Positives = 16/19 (84%)
 Frame = +1

Query: 328 PAFINLPNSFRVKVTHVGS 384
           P  I+LPNSF+VKVTH G+
Sbjct: 416 PLTISLPNSFKVKVTHGGT 434


>gb|ABD32757.1| Integrase, catalytic region [Medicago truncatula]
          Length = 1157

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 29/74 (39%), Positives = 42/74 (56%)
 Frame = +1

Query: 280 HVIFP*MLYLSYSSNRPAFINLPNSFRVKVTHVGSVTIFSDLVLKNVLLVPAFRINLISI 459
           H+    + + S+   +P  +NLPN   V V + G+V+  S L L NVL  P F +NLIS+
Sbjct: 399 HICSSSLCFTSFYKIKPTNVNLPNKTTVLVQYAGNVSFSSSLYLTNVLYCPTFNLNLISV 458

Query: 460 QKFCKQFLCHLSFS 501
            K CK   C ++FS
Sbjct: 459 SKMCKSLSCFVNFS 472


>ref|XP_004251371.1| PREDICTED: uncharacterized protein LOC101266191 [Solanum
           lycopersicum]
          Length = 611

 Score = 60.1 bits (144), Expect = 8e-07
 Identities = 28/58 (48%), Positives = 37/58 (63%)
 Frame = +1

Query: 328 PAFINLPNSFRVKVTHVGSVTIFSDLVLKNVLLVPAFRINLISIQKFCKQFLCHLSFS 501
           P  + LPN ++VKVT VG+V I S + L NVL +P+F+ NLISI        C +SFS
Sbjct: 457 PVLVRLPNGYKVKVTEVGNVRITSQITLYNVLFIPSFKYNLISINSLTLHLKCVVSFS 514


>ref|XP_006343734.1| PREDICTED: uncharacterized protein LOC102590164 [Solanum tuberosum]
          Length = 1105

 Score = 54.3 bits (129), Expect(2) = 1e-06
 Identities = 24/52 (46%), Positives = 38/52 (73%)
 Frame = +1

Query: 322 NRPAFINLPNSFRVKVTHVGSVTIFSDLVLKNVLLVPAFRINLISIQKFCKQ 477
           +RP  + LPNS++V VT +G V++  +L L+NVL VP+F+ NL+S+ +F  Q
Sbjct: 445 SRPISVTLPNSYKVSVTCIGIVSLIPNLELQNVLYVPSFKHNLLSVSQFVDQ 496



 Score = 25.0 bits (53), Expect(2) = 1e-06
 Identities = 14/51 (27%), Positives = 24/51 (47%)
 Frame = +2

Query: 137 QSAIHSDSPSDAHAKIIQIAGNIFKDPMAYYTHVNSNSCIVNSGASEHTSF 289
           QS     S S+ H   +     +     + +T  NS   I++SGAS+H ++
Sbjct: 383 QSGDSQASGSENHFASMAGIATVLSAYSSCFTVFNSKPWIIDSGASQHMTY 433


>ref|XP_004240202.1| PREDICTED: uncharacterized protein LOC101267997 [Solanum
           lycopersicum]
          Length = 811

 Score = 55.8 bits (133), Expect(2) = 2e-06
 Identities = 27/58 (46%), Positives = 36/58 (62%)
 Frame = +1

Query: 328 PAFINLPNSFRVKVTHVGSVTIFSDLVLKNVLLVPAFRINLISIQKFCKQFLCHLSFS 501
           P  I+LPN ++VKVT  G V I   ++L  VL VP+F+ NLIS+Q       C +SFS
Sbjct: 433 PILISLPNRYKVKVTEFGDVHITPKMILNKVLHVPSFKHNLISVQSLVSSMKCVISFS 490



 Score = 22.3 bits (46), Expect(2) = 2e-06
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +2

Query: 254 IVNSGASEHTSFSPKCFTSLTPL 322
           I++SGAS H +++    T++  L
Sbjct: 408 IIDSGASNHMTYNKSSLTNIQTL 430


>ref|XP_006342254.1| PREDICTED: uncharacterized protein LOC102581824 [Solanum tuberosum]
          Length = 359

 Score = 52.0 bits (123), Expect(2) = 2e-06
 Identities = 23/49 (46%), Positives = 34/49 (69%)
 Frame = +1

Query: 328 PAFINLPNSFRVKVTHVGSVTIFSDLVLKNVLLVPAFRINLISIQKFCK 474
           P  I LPN ++VKV  +G+V + S++VL+ VL VP+F+ NL+SI    K
Sbjct: 113 PLLITLPNGYKVKVVQIGNVVLASNIVLQEVLYVPSFKYNLVSINCLSK 161



 Score = 26.2 bits (56), Expect(2) = 2e-06
 Identities = 9/13 (69%), Positives = 13/13 (100%)
 Frame = +2

Query: 500 LILGEARDGVYFL 538
           L++GEA+DG+YFL
Sbjct: 186 LVIGEAKDGLYFL 198


>ref|XP_004234448.1| PREDICTED: uncharacterized protein LOC101267489 [Solanum
           lycopersicum]
          Length = 886

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 26/60 (43%), Positives = 37/60 (61%)
 Frame = +1

Query: 319 SNRPAFINLPNSFRVKVTHVGSVTIFSDLVLKNVLLVPAFRINLISIQKFCKQFLCHLSF 498
           SN+P  + LPN    ++TH+GS  I S   LKNVLL+P F+ NL+S+ +  K   C + F
Sbjct: 434 SNKPRNVQLPNGETNQITHIGSCNITSQNTLKNVLLIPEFKFNLLSVSQITKDLKCAVCF 493


>ref|XP_004246827.1| PREDICTED: uncharacterized protein LOC101260567 [Solanum
           lycopersicum]
          Length = 923

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 27/58 (46%), Positives = 37/58 (63%)
 Frame = +1

Query: 328 PAFINLPNSFRVKVTHVGSVTIFSDLVLKNVLLVPAFRINLISIQKFCKQFLCHLSFS 501
           P  ++LPN ++VKVT  G V I   +VL  VLLVP+F+ NLIS+Q       C +SF+
Sbjct: 438 PILVSLPNGYKVKVTEFGDVHIAFKMVLNKVLLVPSFKHNLISVQSLVSSMQCMISFT 495


>ref|XP_004246816.1| PREDICTED: uncharacterized protein LOC101254628 [Solanum
           lycopersicum]
          Length = 759

 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 26/60 (43%), Positives = 38/60 (63%)
 Frame = +1

Query: 319 SNRPAFINLPNSFRVKVTHVGSVTIFSDLVLKNVLLVPAFRINLISIQKFCKQFLCHLSF 498
           S++P  + LPN   VKVTH GS  + S   ++NVLL+P F+ NL+S+ K  +   C +SF
Sbjct: 439 SDKPRRVYLPNGDNVKVTHTGSCHLNSQDTIENVLLIPVFKFNLLSVSKMTRDLNCVVSF 498


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